Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026983.01.T01 | XP_003589705.1 | 92.063 | 63 | 5 | 0 | 1 | 63 | 1 | 63 | 2.06E-30 | 117 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026983.01.T01 | Q8RYD9 | 71.429 | 63 | 18 | 0 | 1 | 63 | 1 | 63 | 3.98E-26 | 99 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026983.01.T01 | G7IA45 | 92.063 | 63 | 5 | 0 | 1 | 63 | 1 | 63 | 9.83e-31 | 117 |
Gene ID | Type | Classification |
---|---|---|
MsG0580026983.01.T01 | TF | MADS-M-type |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026983.01.T01 | MTR_1g038300 | 92.063 | 63 | 5 | 0 | 1 | 63 | 1 | 63 | 2.49e-34 | 117 |
MsG0580026983.01.T01 | MTR_2g461710 | 60.000 | 60 | 24 | 0 | 1 | 60 | 1 | 60 | 1.12e-22 | 82.4 |
MsG0580026983.01.T01 | MTR_5g066960 | 61.017 | 59 | 23 | 0 | 1 | 59 | 1 | 59 | 3.20e-22 | 81.3 |
MsG0580026983.01.T01 | MTR_3g088615 | 55.385 | 65 | 29 | 0 | 1 | 65 | 1 | 65 | 5.96e-22 | 84.0 |
MsG0580026983.01.T01 | MTR_2g009890 | 60.000 | 65 | 26 | 0 | 1 | 65 | 1 | 65 | 1.55e-21 | 84.7 |
MsG0580026983.01.T01 | MTR_5g046870 | 58.065 | 62 | 26 | 0 | 1 | 62 | 1 | 62 | 1.79e-21 | 80.9 |
MsG0580026983.01.T01 | MTR_7g075850 | 62.903 | 62 | 23 | 0 | 1 | 62 | 1 | 62 | 2.19e-21 | 84.0 |
MsG0580026983.01.T01 | MTR_4g093030 | 58.209 | 67 | 28 | 0 | 1 | 67 | 1 | 67 | 2.97e-21 | 81.6 |
MsG0580026983.01.T01 | MTR_1g053070 | 60.938 | 64 | 25 | 0 | 1 | 64 | 1 | 64 | 2.99e-21 | 83.6 |
MsG0580026983.01.T01 | MTR_8g097090 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 5.89e-21 | 82.8 |
MsG0580026983.01.T01 | MTR_0003s0590 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 7.69e-21 | 82.8 |
MsG0580026983.01.T01 | MTR_4g109830 | 60.000 | 60 | 24 | 0 | 1 | 60 | 1 | 60 | 9.59e-21 | 82.0 |
MsG0580026983.01.T01 | MTR_7g016600 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 1.02e-20 | 82.0 |
MsG0580026983.01.T01 | MTR_3g005530 | 60.317 | 63 | 25 | 0 | 1 | 63 | 1 | 63 | 1.11e-20 | 81.6 |
MsG0580026983.01.T01 | MTR_3g452380 | 58.730 | 63 | 26 | 0 | 1 | 63 | 16 | 78 | 1.30e-20 | 81.6 |
MsG0580026983.01.T01 | MTR_3g084980 | 58.065 | 62 | 26 | 0 | 1 | 62 | 1 | 62 | 1.68e-20 | 81.6 |
MsG0580026983.01.T01 | MTR_1g029670 | 52.239 | 67 | 32 | 0 | 1 | 67 | 1 | 67 | 1.87e-20 | 80.1 |
MsG0580026983.01.T01 | MTR_6g015975 | 58.065 | 62 | 26 | 0 | 1 | 62 | 1 | 62 | 1.95e-20 | 81.6 |
MsG0580026983.01.T01 | MTR_5g031000 | 58.462 | 65 | 27 | 0 | 1 | 65 | 1 | 65 | 2.33e-20 | 80.9 |
MsG0580026983.01.T01 | MTR_5g032150 | 63.077 | 65 | 24 | 0 | 1 | 65 | 1 | 65 | 2.38e-20 | 80.9 |
MsG0580026983.01.T01 | MTR_3g113030 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 2.44e-20 | 80.9 |
MsG0580026983.01.T01 | MTR_5g031000 | 58.462 | 65 | 27 | 0 | 1 | 65 | 1 | 65 | 2.69e-20 | 80.9 |
MsG0580026983.01.T01 | MTR_5g032520 | 63.077 | 65 | 24 | 0 | 1 | 65 | 1 | 65 | 3.28e-20 | 80.5 |
MsG0580026983.01.T01 | MTR_5g046790 | 59.016 | 61 | 25 | 0 | 1 | 61 | 1 | 61 | 3.97e-20 | 80.1 |
MsG0580026983.01.T01 | MTR_2g017865 | 58.730 | 63 | 26 | 0 | 1 | 63 | 16 | 78 | 4.59e-20 | 80.5 |
MsG0580026983.01.T01 | MTR_8g033270 | 61.290 | 62 | 24 | 0 | 1 | 62 | 1 | 62 | 1.79e-19 | 79.0 |
MsG0580026983.01.T01 | MTR_4g109810 | 57.377 | 61 | 26 | 0 | 1 | 61 | 1 | 61 | 2.68e-19 | 78.2 |
MsG0580026983.01.T01 | MTR_8g066260 | 57.377 | 61 | 26 | 0 | 1 | 61 | 1 | 61 | 4.49e-19 | 77.8 |
MsG0580026983.01.T01 | MTR_7g016630 | 59.322 | 59 | 24 | 0 | 1 | 59 | 1 | 59 | 4.56e-19 | 77.8 |
MsG0580026983.01.T01 | MTR_5g021270 | 59.649 | 57 | 23 | 0 | 1 | 57 | 1 | 57 | 6.48e-19 | 77.0 |
MsG0580026983.01.T01 | MTR_5g021270 | 59.649 | 57 | 23 | 0 | 1 | 57 | 1 | 57 | 6.87e-19 | 77.0 |
MsG0580026983.01.T01 | MTR_5g066180 | 55.385 | 65 | 29 | 0 | 1 | 65 | 1 | 65 | 1.16e-18 | 76.3 |
MsG0580026983.01.T01 | MTR_1g101970 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 1.42e-18 | 75.5 |
MsG0580026983.01.T01 | MTR_8g087860 | 57.143 | 63 | 27 | 0 | 1 | 63 | 17 | 79 | 1.55e-18 | 76.3 |
MsG0580026983.01.T01 | MTR_6g464720 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 2.05e-18 | 76.3 |
MsG0580026983.01.T01 | MTR_4g093970 | 55.385 | 65 | 29 | 0 | 1 | 65 | 27 | 91 | 1.37e-17 | 73.9 |
MsG0580026983.01.T01 | MTR_4g102530 | 57.377 | 61 | 26 | 0 | 1 | 61 | 1 | 61 | 1.61e-17 | 73.2 |
MsG0580026983.01.T01 | MTR_4g036050 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 2.13e-17 | 72.0 |
MsG0580026983.01.T01 | MTR_4g036050 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 2.64e-17 | 72.0 |
MsG0580026983.01.T01 | MTR_4g084740 | 47.297 | 74 | 33 | 1 | 1 | 68 | 1 | 74 | 3.11e-17 | 73.9 |
MsG0580026983.01.T01 | MTR_4g036050 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 3.14e-17 | 72.0 |
MsG0580026983.01.T01 | MTR_4g036050 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 3.82e-17 | 72.0 |
MsG0580026983.01.T01 | MTR_7g075870 | 59.322 | 59 | 24 | 0 | 1 | 59 | 1 | 59 | 6.25e-17 | 71.6 |
MsG0580026983.01.T01 | MTR_7g075870 | 59.322 | 59 | 24 | 0 | 1 | 59 | 1 | 59 | 6.98e-17 | 71.6 |
MsG0580026983.01.T01 | MTR_8g033220 | 55.738 | 61 | 27 | 0 | 1 | 61 | 1 | 61 | 1.24e-16 | 70.9 |
MsG0580026983.01.T01 | MTR_8g033220 | 55.738 | 61 | 27 | 0 | 1 | 61 | 1 | 61 | 1.40e-16 | 70.9 |
MsG0580026983.01.T01 | MTR_3g102570 | 48.649 | 74 | 32 | 1 | 1 | 68 | 1 | 74 | 8.19e-16 | 70.1 |
MsG0580026983.01.T01 | MTR_8g079502 | 57.143 | 49 | 21 | 0 | 1 | 49 | 1 | 49 | 6.65e-15 | 65.9 |
MsG0580026983.01.T01 | MTR_1g047550 | 57.143 | 49 | 21 | 0 | 1 | 49 | 1 | 49 | 1.84e-14 | 64.7 |
MsG0580026983.01.T01 | MTR_2g085250 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 2.79e-14 | 65.1 |
MsG0580026983.01.T01 | MTR_2g085280 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 2.88e-14 | 65.1 |
MsG0580026983.01.T01 | MTR_3g052920 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 4.63e-14 | 64.3 |
MsG0580026983.01.T01 | MTR_5g053390 | 53.571 | 56 | 26 | 0 | 2 | 57 | 9 | 64 | 6.40e-14 | 63.9 |
MsG0580026983.01.T01 | MTR_1g063160 | 55.102 | 49 | 22 | 0 | 1 | 49 | 1 | 49 | 6.60e-14 | 63.2 |
MsG0580026983.01.T01 | MTR_8g051580 | 42.857 | 70 | 40 | 0 | 1 | 70 | 1 | 70 | 7.51e-14 | 63.2 |
MsG0580026983.01.T01 | MTR_4g131030 | 57.143 | 49 | 21 | 0 | 1 | 49 | 1 | 49 | 9.91e-14 | 63.2 |
MsG0580026983.01.T01 | MTR_1g054265 | 53.061 | 49 | 23 | 0 | 1 | 49 | 1 | 49 | 1.22e-13 | 62.4 |
MsG0580026983.01.T01 | MTR_2g030740 | 51.786 | 56 | 27 | 0 | 2 | 57 | 9 | 64 | 1.23e-13 | 63.2 |
MsG0580026983.01.T01 | MTR_8g086290 | 44.928 | 69 | 38 | 0 | 2 | 70 | 12 | 80 | 1.48e-13 | 62.0 |
MsG0580026983.01.T01 | MTR_3g052870 | 52.830 | 53 | 25 | 0 | 2 | 54 | 9 | 61 | 1.61e-13 | 62.8 |
MsG0580026983.01.T01 | MTR_1g075600 | 53.571 | 56 | 26 | 0 | 2 | 57 | 9 | 64 | 1.79e-13 | 62.8 |
MsG0580026983.01.T01 | MTR_1g077360 | 53.571 | 56 | 26 | 0 | 2 | 57 | 9 | 64 | 1.79e-13 | 62.8 |
MsG0580026983.01.T01 | MTR_5g055100 | 55.357 | 56 | 25 | 0 | 2 | 57 | 9 | 64 | 1.90e-13 | 62.8 |
MsG0580026983.01.T01 | MTR_2g105290 | 51.724 | 58 | 26 | 1 | 1 | 58 | 11 | 66 | 2.11e-13 | 61.6 |
MsG0580026983.01.T01 | MTR_5g045560 | 52.632 | 57 | 27 | 0 | 1 | 57 | 8 | 64 | 3.29e-13 | 62.0 |
MsG0580026983.01.T01 | MTR_1g012570 | 53.571 | 56 | 26 | 0 | 2 | 57 | 9 | 64 | 3.50e-13 | 62.0 |
MsG0580026983.01.T01 | MTR_1g105920 | 50.000 | 56 | 28 | 0 | 2 | 57 | 9 | 64 | 3.65e-13 | 62.0 |
MsG0580026983.01.T01 | MTR_8g043650 | 50.000 | 56 | 28 | 0 | 2 | 57 | 9 | 64 | 3.84e-13 | 62.0 |
MsG0580026983.01.T01 | MTR_1g108510 | 52.830 | 53 | 25 | 0 | 2 | 54 | 9 | 61 | 4.08e-13 | 61.6 |
MsG0580026983.01.T01 | MTR_3g030770 | 52.830 | 53 | 25 | 0 | 2 | 54 | 9 | 61 | 4.39e-13 | 61.6 |
MsG0580026983.01.T01 | MTR_1g106070 | 52.830 | 53 | 25 | 0 | 2 | 54 | 9 | 61 | 4.51e-13 | 60.8 |
MsG0580026983.01.T01 | MTR_2g093190 | 52.830 | 53 | 25 | 0 | 2 | 54 | 9 | 61 | 6.86e-13 | 61.2 |
MsG0580026983.01.T01 | MTR_4g108720 | 49.057 | 53 | 27 | 0 | 1 | 53 | 1 | 53 | 9.58e-13 | 61.6 |
MsG0580026983.01.T01 | MTR_1g105910 | 50.000 | 56 | 28 | 0 | 2 | 57 | 9 | 64 | 1.41e-12 | 60.5 |
MsG0580026983.01.T01 | MTR_1g108580 | 50.943 | 53 | 26 | 0 | 2 | 54 | 9 | 61 | 1.55e-12 | 60.1 |
MsG0580026983.01.T01 | MTR_8g046350 | 42.857 | 70 | 40 | 0 | 1 | 70 | 1 | 70 | 1.92e-12 | 58.9 |
MsG0580026983.01.T01 | MTR_4g094632 | 41.429 | 70 | 38 | 1 | 1 | 67 | 1 | 70 | 2.04e-12 | 58.9 |
MsG0580026983.01.T01 | MTR_0121s0100 | 41.667 | 72 | 39 | 1 | 2 | 70 | 9 | 80 | 4.47e-12 | 57.4 |
MsG0580026983.01.T01 | MTR_1g041615 | 45.763 | 59 | 30 | 1 | 13 | 69 | 17 | 75 | 5.34e-12 | 57.4 |
MsG0580026983.01.T01 | MTR_3g080940 | 50.943 | 53 | 26 | 0 | 1 | 53 | 8 | 60 | 1.96e-11 | 57.0 |
MsG0580026983.01.T01 | MTR_0121s0080 | 48.276 | 58 | 28 | 1 | 2 | 57 | 7 | 64 | 2.56e-11 | 57.0 |
MsG0580026983.01.T01 | MTR_5g041650 | 45.455 | 55 | 30 | 0 | 1 | 55 | 38 | 92 | 4.52e-11 | 57.0 |
MsG0580026983.01.T01 | MTR_3g030780 | 47.170 | 53 | 28 | 0 | 2 | 54 | 9 | 61 | 5.41e-11 | 54.7 |
MsG0580026983.01.T01 | MTR_4g094638 | 43.137 | 51 | 29 | 0 | 1 | 51 | 1 | 51 | 8.37e-11 | 55.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0580026983.01.T01 | AT5G23260 | 71.429 | 63 | 18 | 0 | 1 | 63 | 1 | 63 | 1.69e-27 | 99.8 |
MsG0580026983.01.T01 | AT5G23260 | 71.429 | 63 | 18 | 0 | 1 | 63 | 1 | 63 | 4.06e-27 | 99.0 |
MsG0580026983.01.T01 | AT5G23260 | 71.429 | 63 | 18 | 0 | 1 | 63 | 17 | 79 | 7.21e-27 | 98.6 |
MsG0580026983.01.T01 | AT5G23260 | 71.429 | 63 | 18 | 0 | 1 | 63 | 17 | 79 | 7.78e-27 | 98.6 |
MsG0580026983.01.T01 | AT3G57230 | 58.462 | 65 | 27 | 0 | 1 | 65 | 1 | 65 | 2.64e-22 | 84.0 |
MsG0580026983.01.T01 | AT2G14210 | 62.903 | 62 | 23 | 0 | 1 | 62 | 1 | 62 | 7.29e-22 | 85.1 |
MsG0580026983.01.T01 | AT2G14210 | 62.903 | 62 | 23 | 0 | 1 | 62 | 1 | 62 | 8.80e-22 | 84.7 |
MsG0580026983.01.T01 | AT5G13790 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 1.83e-21 | 84.7 |
MsG0580026983.01.T01 | AT5G13790 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 1.85e-21 | 84.7 |
MsG0580026983.01.T01 | AT1G24260 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 2.64e-21 | 83.6 |
MsG0580026983.01.T01 | AT5G60910 | 52.000 | 75 | 27 | 1 | 1 | 66 | 1 | 75 | 3.41e-21 | 83.2 |
MsG0580026983.01.T01 | AT1G26310 | 60.656 | 61 | 24 | 0 | 1 | 61 | 1 | 61 | 3.63e-21 | 83.6 |
MsG0580026983.01.T01 | AT2G03710 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 3.66e-21 | 82.0 |
MsG0580026983.01.T01 | AT1G24260 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 3.97e-21 | 83.2 |
MsG0580026983.01.T01 | AT1G24260 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 4.25e-21 | 83.2 |
MsG0580026983.01.T01 | AT5G20240 | 59.016 | 61 | 25 | 0 | 1 | 61 | 1 | 61 | 4.45e-21 | 80.9 |
MsG0580026983.01.T01 | AT3G57230 | 58.462 | 65 | 27 | 0 | 1 | 65 | 1 | 65 | 8.64e-21 | 82.4 |
MsG0580026983.01.T01 | AT3G57230 | 58.462 | 65 | 27 | 0 | 1 | 65 | 1 | 65 | 8.64e-21 | 82.4 |
MsG0580026983.01.T01 | AT5G15800 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 8.73e-21 | 82.8 |
MsG0580026983.01.T01 | AT4G09960 | 58.730 | 63 | 26 | 0 | 1 | 63 | 1 | 63 | 1.05e-20 | 81.6 |
MsG0580026983.01.T01 | AT3G02310 | 58.065 | 62 | 26 | 0 | 1 | 62 | 1 | 62 | 1.08e-20 | 81.3 |
MsG0580026983.01.T01 | AT4G09960 | 58.730 | 63 | 26 | 0 | 1 | 63 | 1 | 63 | 1.24e-20 | 81.6 |
MsG0580026983.01.T01 | AT4G09960 | 58.730 | 63 | 26 | 0 | 1 | 63 | 2 | 64 | 1.27e-20 | 81.6 |
MsG0580026983.01.T01 | AT4G09960 | 58.730 | 63 | 26 | 0 | 1 | 63 | 11 | 73 | 1.32e-20 | 81.6 |
MsG0580026983.01.T01 | AT3G54340 | 58.065 | 62 | 26 | 0 | 1 | 62 | 1 | 62 | 1.40e-20 | 81.6 |
MsG0580026983.01.T01 | AT3G02310 | 59.016 | 61 | 25 | 0 | 1 | 61 | 1 | 61 | 1.40e-20 | 82.0 |
MsG0580026983.01.T01 | AT3G57390 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 1.50e-20 | 81.3 |
MsG0580026983.01.T01 | AT5G51870 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 1.88e-20 | 80.1 |
MsG0580026983.01.T01 | AT5G20240 | 60.345 | 58 | 23 | 0 | 1 | 58 | 1 | 58 | 2.00e-20 | 80.5 |
MsG0580026983.01.T01 | AT4G09960 | 58.730 | 63 | 26 | 0 | 1 | 63 | 27 | 89 | 2.29e-20 | 81.6 |
MsG0580026983.01.T01 | AT4G37940 | 56.923 | 65 | 28 | 0 | 1 | 65 | 1 | 65 | 2.51e-20 | 79.7 |
MsG0580026983.01.T01 | AT2G03710 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 3.02e-20 | 81.3 |
MsG0580026983.01.T01 | AT2G03710 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 3.13e-20 | 81.3 |
MsG0580026983.01.T01 | AT4G37940 | 56.923 | 65 | 28 | 0 | 1 | 65 | 1 | 65 | 3.33e-20 | 80.1 |
MsG0580026983.01.T01 | AT3G57390 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 3.41e-20 | 80.9 |
MsG0580026983.01.T01 | AT3G58780 | 58.730 | 63 | 26 | 0 | 1 | 63 | 16 | 78 | 3.75e-20 | 81.3 |
MsG0580026983.01.T01 | AT4G37940 | 56.923 | 65 | 28 | 0 | 1 | 65 | 1 | 65 | 5.02e-20 | 80.1 |
MsG0580026983.01.T01 | AT5G15800 | 60.656 | 61 | 24 | 0 | 1 | 61 | 1 | 61 | 5.19e-20 | 80.5 |
MsG0580026983.01.T01 | AT2G42830 | 58.730 | 63 | 26 | 0 | 1 | 63 | 16 | 78 | 5.23e-20 | 80.5 |
MsG0580026983.01.T01 | AT5G51870 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 5.43e-20 | 79.7 |
MsG0580026983.01.T01 | AT5G51870 | 62.712 | 59 | 22 | 0 | 1 | 59 | 24 | 82 | 5.62e-20 | 79.3 |
MsG0580026983.01.T01 | AT2G42830 | 58.730 | 63 | 26 | 0 | 1 | 63 | 16 | 78 | 5.93e-20 | 80.1 |
MsG0580026983.01.T01 | AT4G09960 | 58.730 | 63 | 26 | 0 | 1 | 63 | 96 | 158 | 6.58e-20 | 81.3 |
MsG0580026983.01.T01 | AT2G22540 | 60.000 | 65 | 26 | 0 | 1 | 65 | 1 | 65 | 7.49e-20 | 79.7 |
MsG0580026983.01.T01 | AT2G22540 | 60.000 | 65 | 26 | 0 | 1 | 65 | 1 | 65 | 7.49e-20 | 79.7 |
MsG0580026983.01.T01 | AT4G18960 | 59.677 | 62 | 25 | 0 | 2 | 63 | 18 | 79 | 9.71e-20 | 79.7 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 1.03e-19 | 76.3 |
MsG0580026983.01.T01 | AT5G51870 | 58.462 | 65 | 27 | 0 | 1 | 65 | 11 | 75 | 1.06e-19 | 79.3 |
MsG0580026983.01.T01 | AT3G58780 | 58.730 | 63 | 26 | 0 | 1 | 63 | 16 | 78 | 1.12e-19 | 79.3 |
MsG0580026983.01.T01 | AT5G51870 | 58.462 | 65 | 27 | 0 | 1 | 65 | 1 | 65 | 1.15e-19 | 79.0 |
MsG0580026983.01.T01 | AT3G61120 | 61.017 | 59 | 23 | 0 | 1 | 59 | 1 | 59 | 1.23e-19 | 79.3 |
MsG0580026983.01.T01 | AT3G58780 | 58.730 | 63 | 26 | 0 | 1 | 63 | 22 | 84 | 1.30e-19 | 79.3 |
MsG0580026983.01.T01 | AT3G58780 | 56.716 | 67 | 29 | 0 | 1 | 67 | 16 | 82 | 1.57e-19 | 79.3 |
MsG0580026983.01.T01 | AT2G22630 | 58.730 | 63 | 26 | 0 | 1 | 63 | 1 | 63 | 1.88e-19 | 78.6 |
MsG0580026983.01.T01 | AT2G22630 | 58.730 | 63 | 26 | 0 | 1 | 63 | 1 | 63 | 1.88e-19 | 78.6 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.57e-19 | 76.6 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.57e-19 | 76.6 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.57e-19 | 76.6 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.57e-19 | 76.6 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 2.57e-19 | 76.6 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 3.61e-19 | 76.3 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 3.61e-19 | 76.3 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 3.61e-19 | 76.3 |
MsG0580026983.01.T01 | AT2G45650 | 62.712 | 59 | 22 | 0 | 1 | 59 | 1 | 59 | 4.76e-19 | 77.8 |
MsG0580026983.01.T01 | AT5G51860 | 58.730 | 63 | 26 | 0 | 1 | 63 | 1 | 63 | 6.41e-19 | 76.6 |
MsG0580026983.01.T01 | AT3G30260 | 53.226 | 62 | 29 | 0 | 1 | 62 | 1 | 62 | 7.08e-19 | 77.4 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 8.78e-19 | 76.3 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 8.78e-19 | 76.3 |
MsG0580026983.01.T01 | AT5G51860 | 58.730 | 63 | 26 | 0 | 1 | 63 | 1 | 63 | 9.15e-19 | 76.3 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 1.05e-18 | 76.3 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 1.05e-18 | 76.3 |
MsG0580026983.01.T01 | AT5G62165 | 64.407 | 59 | 21 | 0 | 1 | 59 | 1 | 59 | 1.05e-18 | 76.3 |
MsG0580026983.01.T01 | AT1G69120 | 55.738 | 61 | 27 | 0 | 1 | 61 | 1 | 61 | 1.19e-18 | 77.0 |
MsG0580026983.01.T01 | AT4G11880 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 1.78e-18 | 75.1 |
MsG0580026983.01.T01 | AT4G11880 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 1.78e-18 | 75.1 |
MsG0580026983.01.T01 | AT5G10140 | 54.237 | 59 | 27 | 0 | 1 | 59 | 1 | 59 | 2.15e-18 | 75.1 |
MsG0580026983.01.T01 | AT5G10140 | 54.237 | 59 | 27 | 0 | 1 | 59 | 1 | 59 | 2.17e-18 | 74.7 |
MsG0580026983.01.T01 | AT3G58780 | 58.333 | 60 | 25 | 0 | 1 | 60 | 16 | 75 | 2.37e-18 | 75.9 |
MsG0580026983.01.T01 | AT5G10140 | 54.237 | 59 | 27 | 0 | 1 | 59 | 1 | 59 | 2.45e-18 | 74.3 |
MsG0580026983.01.T01 | AT4G11880 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 2.59e-18 | 75.5 |
MsG0580026983.01.T01 | AT4G11880 | 59.677 | 62 | 25 | 0 | 1 | 62 | 1 | 62 | 2.59e-18 | 75.5 |
MsG0580026983.01.T01 | AT1G69120 | 55.738 | 61 | 27 | 0 | 1 | 61 | 1 | 61 | 3.22e-18 | 75.5 |
MsG0580026983.01.T01 | AT5G10140 | 54.237 | 59 | 27 | 0 | 1 | 59 | 1 | 59 | 4.86e-18 | 73.9 |
MsG0580026983.01.T01 | AT4G22950 | 59.016 | 61 | 25 | 0 | 1 | 61 | 1 | 61 | 5.29e-18 | 73.6 |
MsG0580026983.01.T01 | AT4G22950 | 59.016 | 61 | 25 | 0 | 1 | 61 | 1 | 61 | 8.67e-18 | 73.9 |
MsG0580026983.01.T01 | AT4G22950 | 59.016 | 61 | 25 | 0 | 1 | 61 | 1 | 61 | 8.67e-18 | 73.9 |
MsG0580026983.01.T01 | AT1G22130 | 50.000 | 74 | 31 | 1 | 1 | 68 | 1 | 74 | 1.01e-17 | 75.5 |
MsG0580026983.01.T01 | AT5G65070 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 1.66e-17 | 71.6 |
MsG0580026983.01.T01 | AT1G71692 | 54.839 | 62 | 28 | 0 | 1 | 62 | 1 | 62 | 2.24e-17 | 72.8 |
MsG0580026983.01.T01 | AT2G45660 | 57.377 | 61 | 26 | 0 | 1 | 61 | 1 | 61 | 2.33e-17 | 71.6 |
MsG0580026983.01.T01 | AT5G65070 | 50.000 | 74 | 36 | 1 | 1 | 74 | 1 | 73 | 2.74e-17 | 72.8 |
MsG0580026983.01.T01 | AT5G65050 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 3.09e-17 | 71.6 |
MsG0580026983.01.T01 | AT4G24540 | 58.462 | 65 | 27 | 0 | 1 | 65 | 1 | 65 | 3.14e-17 | 72.4 |
MsG0580026983.01.T01 | AT5G65050 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 4.26e-17 | 71.6 |
MsG0580026983.01.T01 | AT5G65070 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 4.58e-17 | 72.0 |
MsG0580026983.01.T01 | AT5G65070 | 54.237 | 59 | 27 | 0 | 1 | 59 | 1 | 59 | 5.15e-17 | 71.6 |
MsG0580026983.01.T01 | AT5G65050 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 5.65e-17 | 71.2 |
MsG0580026983.01.T01 | AT5G65050 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 5.76e-17 | 71.6 |
MsG0580026983.01.T01 | AT2G22540 | 66.667 | 54 | 18 | 0 | 1 | 54 | 1 | 54 | 6.04e-17 | 72.0 |
MsG0580026983.01.T01 | AT2G45660 | 57.377 | 61 | 26 | 0 | 1 | 61 | 1 | 61 | 6.04e-17 | 71.6 |
MsG0580026983.01.T01 | AT5G65070 | 54.237 | 59 | 27 | 0 | 1 | 59 | 1 | 59 | 7.74e-17 | 71.6 |
MsG0580026983.01.T01 | AT1G77980 | 49.315 | 73 | 31 | 1 | 1 | 67 | 1 | 73 | 8.75e-17 | 72.8 |
MsG0580026983.01.T01 | AT5G65060 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 2.27e-16 | 69.7 |
MsG0580026983.01.T01 | AT5G65060 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 2.64e-16 | 69.7 |
MsG0580026983.01.T01 | AT5G65060 | 52.542 | 59 | 28 | 0 | 1 | 59 | 1 | 59 | 2.72e-16 | 69.3 |
MsG0580026983.01.T01 | AT5G65080 | 46.914 | 81 | 35 | 3 | 1 | 75 | 8 | 86 | 3.93e-16 | 69.3 |
MsG0580026983.01.T01 | AT5G65080 | 55.556 | 54 | 24 | 0 | 1 | 54 | 8 | 61 | 2.79e-15 | 67.0 |
MsG0580026983.01.T01 | AT1G77080 | 67.500 | 40 | 13 | 0 | 1 | 40 | 1 | 40 | 5.04e-14 | 63.5 |
MsG0580026983.01.T01 | AT1G77080 | 67.500 | 40 | 13 | 0 | 1 | 40 | 1 | 40 | 6.17e-14 | 63.2 |
MsG0580026983.01.T01 | AT1G31140 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 6.58e-14 | 63.5 |
MsG0580026983.01.T01 | AT1G77080 | 67.500 | 40 | 13 | 0 | 1 | 40 | 1 | 40 | 6.76e-14 | 62.4 |
MsG0580026983.01.T01 | AT1G31140 | 51.613 | 62 | 30 | 0 | 1 | 62 | 1 | 62 | 7.42e-14 | 63.5 |
MsG0580026983.01.T01 | AT1G77080 | 67.500 | 40 | 13 | 0 | 1 | 40 | 1 | 40 | 1.15e-13 | 62.8 |
MsG0580026983.01.T01 | AT1G77950 | 43.243 | 74 | 36 | 1 | 1 | 68 | 1 | 74 | 1.18e-13 | 63.5 |
MsG0580026983.01.T01 | AT1G77950 | 43.243 | 74 | 36 | 1 | 1 | 68 | 1 | 74 | 1.18e-13 | 63.5 |
MsG0580026983.01.T01 | AT1G77950 | 43.243 | 74 | 36 | 1 | 1 | 68 | 1 | 74 | 1.18e-13 | 63.5 |
MsG0580026983.01.T01 | AT1G77950 | 43.243 | 74 | 36 | 1 | 1 | 68 | 1 | 74 | 1.18e-13 | 63.5 |
MsG0580026983.01.T01 | AT1G77080 | 67.500 | 40 | 13 | 0 | 1 | 40 | 1 | 40 | 1.67e-13 | 62.4 |
MsG0580026983.01.T01 | AT1G77080 | 67.500 | 40 | 13 | 0 | 1 | 40 | 1 | 40 | 1.85e-13 | 62.8 |
MsG0580026983.01.T01 | AT3G66656 | 50.943 | 53 | 26 | 0 | 1 | 53 | 1 | 53 | 2.33e-13 | 61.6 |
MsG0580026983.01.T01 | AT2G34440 | 52.830 | 53 | 25 | 0 | 1 | 53 | 1 | 53 | 2.47e-13 | 61.6 |
MsG0580026983.01.T01 | AT1G72350 | 66.667 | 48 | 16 | 0 | 2 | 49 | 43 | 90 | 3.15e-13 | 62.0 |
MsG0580026983.01.T01 | AT4G37435 | 51.852 | 54 | 26 | 0 | 1 | 54 | 1 | 54 | 4.74e-13 | 60.8 |
MsG0580026983.01.T01 | AT2G03060 | 50.000 | 58 | 29 | 0 | 1 | 58 | 1 | 58 | 6.53e-13 | 62.0 |
MsG0580026983.01.T01 | AT2G03060 | 50.000 | 58 | 29 | 0 | 1 | 58 | 1 | 58 | 6.53e-13 | 62.0 |
MsG0580026983.01.T01 | AT2G03060 | 50.000 | 58 | 29 | 0 | 1 | 58 | 1 | 58 | 6.53e-13 | 62.0 |
MsG0580026983.01.T01 | AT1G01530 | 52.830 | 53 | 25 | 0 | 1 | 53 | 6 | 58 | 8.03e-13 | 61.2 |
MsG0580026983.01.T01 | AT2G03060 | 50.000 | 58 | 29 | 0 | 1 | 58 | 1 | 58 | 8.98e-13 | 61.6 |
MsG0580026983.01.T01 | AT5G60440 | 46.429 | 56 | 30 | 0 | 2 | 57 | 7 | 62 | 1.08e-12 | 61.2 |
MsG0580026983.01.T01 | AT1G18750 | 42.105 | 57 | 33 | 0 | 1 | 57 | 1 | 57 | 2.04e-12 | 60.8 |
MsG0580026983.01.T01 | AT1G69540 | 49.091 | 55 | 28 | 0 | 1 | 55 | 1 | 55 | 2.24e-12 | 60.5 |
MsG0580026983.01.T01 | AT1G69540 | 49.091 | 55 | 28 | 0 | 1 | 55 | 1 | 55 | 2.69e-12 | 60.5 |
MsG0580026983.01.T01 | AT2G24840 | 54.717 | 53 | 24 | 0 | 1 | 53 | 62 | 114 | 8.70e-12 | 58.5 |
MsG0580026983.01.T01 | AT3G04100 | 40.625 | 64 | 38 | 0 | 2 | 65 | 14 | 77 | 9.41e-12 | 57.8 |
MsG0580026983.01.T01 | AT1G18750 | 38.710 | 62 | 38 | 0 | 1 | 62 | 1 | 62 | 1.65e-11 | 58.2 |
MsG0580026983.01.T01 | AT1G18750 | 42.105 | 57 | 33 | 0 | 1 | 57 | 1 | 57 | 1.84e-11 | 58.2 |
MsG0580026983.01.T01 | AT4G36590 | 51.786 | 56 | 27 | 0 | 2 | 57 | 7 | 62 | 2.45e-11 | 57.4 |
Find 4 sgRNAs with CRISPR-Local
Find 8 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGAAAATGTCAATTGCCTTG+TGG | 0.610624 | 5:+50716245 | None:intergenic |
AGTATTGCTCTGATTCCACT+AGG | 0.629625 | 5:-50716122 | MsG0580026983.01.T01:CDS |
GGGTAAATATATATACCTAG+TGG | 0.638199 | 5:+50716107 | None:intergenic |
AGATTCAAAACAAAACCACA+AGG | 0.742293 | 5:-50716260 | MsG0580026983.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GAAAAATAAAAACAAAATAA+AGG | + | Chr5:50716285-50716304 | None:intergenic | 10.0% |
!! | ACATTTTCAAAAAGAAGAAC+TGG | - | Chr5:50716137-50716156 | MsG0580026983.01.T01:CDS | 25.0% |
AGATTCAAAACAAAACCACA+AGG | - | Chr5:50716108-50716127 | MsG0580026983.01.T01:CDS | 30.0% | |
GGGTAAATATATATACCTAG+TGG | + | Chr5:50716264-50716283 | None:intergenic | 30.0% | |
TGAAAATGTCAATTGCCTTG+TGG | + | Chr5:50716126-50716145 | None:intergenic | 35.0% | |
AGTATTGCTCTGATTCCACT+AGG | - | Chr5:50716246-50716265 | MsG0580026983.01.T01:CDS | 40.0% | |
! | GCAATACTGAGAGAGCTTTT+TGG | + | Chr5:50716234-50716253 | None:intergenic | 40.0% |
!! | AAAAATAAAAACAAAATAAA+GGG | + | Chr5:50716284-50716303 | None:intergenic | 5.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr5 | gene | 50716080 | 50716310 | 50716080 | ID=MsG0580026983.01;Name=MsG0580026983.01 |
Chr5 | mRNA | 50716080 | 50716310 | 50716080 | ID=MsG0580026983.01.T01;Parent=MsG0580026983.01;Name=MsG0580026983.01.T01;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|0|1|0|76 |
Chr5 | exon | 50716080 | 50716310 | 50716080 | ID=MsG0580026983.01.T01:exon:28759;Parent=MsG0580026983.01.T01 |
Chr5 | CDS | 50716080 | 50716310 | 50716080 | ID=MsG0580026983.01.T01:cds;Parent=MsG0580026983.01.T01 |
Gene Sequence |
Protein sequence |