AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026983.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026983.01.T01 MTR_1g038300 92.063 63 5 0 1 63 1 63 2.49e-34 117
MsG0580026983.01.T01 MTR_2g461710 60.000 60 24 0 1 60 1 60 1.12e-22 82.4
MsG0580026983.01.T01 MTR_5g066960 61.017 59 23 0 1 59 1 59 3.20e-22 81.3
MsG0580026983.01.T01 MTR_3g088615 55.385 65 29 0 1 65 1 65 5.96e-22 84.0
MsG0580026983.01.T01 MTR_2g009890 60.000 65 26 0 1 65 1 65 1.55e-21 84.7
MsG0580026983.01.T01 MTR_5g046870 58.065 62 26 0 1 62 1 62 1.79e-21 80.9
MsG0580026983.01.T01 MTR_7g075850 62.903 62 23 0 1 62 1 62 2.19e-21 84.0
MsG0580026983.01.T01 MTR_4g093030 58.209 67 28 0 1 67 1 67 2.97e-21 81.6
MsG0580026983.01.T01 MTR_1g053070 60.938 64 25 0 1 64 1 64 2.99e-21 83.6
MsG0580026983.01.T01 MTR_8g097090 59.677 62 25 0 1 62 1 62 5.89e-21 82.8
MsG0580026983.01.T01 MTR_0003s0590 62.712 59 22 0 1 59 1 59 7.69e-21 82.8
MsG0580026983.01.T01 MTR_4g109830 60.000 60 24 0 1 60 1 60 9.59e-21 82.0
MsG0580026983.01.T01 MTR_7g016600 59.677 62 25 0 1 62 1 62 1.02e-20 82.0
MsG0580026983.01.T01 MTR_3g005530 60.317 63 25 0 1 63 1 63 1.11e-20 81.6
MsG0580026983.01.T01 MTR_3g452380 58.730 63 26 0 1 63 16 78 1.30e-20 81.6
MsG0580026983.01.T01 MTR_3g084980 58.065 62 26 0 1 62 1 62 1.68e-20 81.6
MsG0580026983.01.T01 MTR_1g029670 52.239 67 32 0 1 67 1 67 1.87e-20 80.1
MsG0580026983.01.T01 MTR_6g015975 58.065 62 26 0 1 62 1 62 1.95e-20 81.6
MsG0580026983.01.T01 MTR_5g031000 58.462 65 27 0 1 65 1 65 2.33e-20 80.9
MsG0580026983.01.T01 MTR_5g032150 63.077 65 24 0 1 65 1 65 2.38e-20 80.9
MsG0580026983.01.T01 MTR_3g113030 59.677 62 25 0 1 62 1 62 2.44e-20 80.9
MsG0580026983.01.T01 MTR_5g031000 58.462 65 27 0 1 65 1 65 2.69e-20 80.9
MsG0580026983.01.T01 MTR_5g032520 63.077 65 24 0 1 65 1 65 3.28e-20 80.5
MsG0580026983.01.T01 MTR_5g046790 59.016 61 25 0 1 61 1 61 3.97e-20 80.1
MsG0580026983.01.T01 MTR_2g017865 58.730 63 26 0 1 63 16 78 4.59e-20 80.5
MsG0580026983.01.T01 MTR_8g033270 61.290 62 24 0 1 62 1 62 1.79e-19 79.0
MsG0580026983.01.T01 MTR_4g109810 57.377 61 26 0 1 61 1 61 2.68e-19 78.2
MsG0580026983.01.T01 MTR_8g066260 57.377 61 26 0 1 61 1 61 4.49e-19 77.8
MsG0580026983.01.T01 MTR_7g016630 59.322 59 24 0 1 59 1 59 4.56e-19 77.8
MsG0580026983.01.T01 MTR_5g021270 59.649 57 23 0 1 57 1 57 6.48e-19 77.0
MsG0580026983.01.T01 MTR_5g021270 59.649 57 23 0 1 57 1 57 6.87e-19 77.0
MsG0580026983.01.T01 MTR_5g066180 55.385 65 29 0 1 65 1 65 1.16e-18 76.3
MsG0580026983.01.T01 MTR_1g101970 62.712 59 22 0 1 59 1 59 1.42e-18 75.5
MsG0580026983.01.T01 MTR_8g087860 57.143 63 27 0 1 63 17 79 1.55e-18 76.3
MsG0580026983.01.T01 MTR_6g464720 62.712 59 22 0 1 59 1 59 2.05e-18 76.3
MsG0580026983.01.T01 MTR_4g093970 55.385 65 29 0 1 65 27 91 1.37e-17 73.9
MsG0580026983.01.T01 MTR_4g102530 57.377 61 26 0 1 61 1 61 1.61e-17 73.2
MsG0580026983.01.T01 MTR_4g036050 51.613 62 30 0 1 62 1 62 2.13e-17 72.0
MsG0580026983.01.T01 MTR_4g036050 51.613 62 30 0 1 62 1 62 2.64e-17 72.0
MsG0580026983.01.T01 MTR_4g084740 47.297 74 33 1 1 68 1 74 3.11e-17 73.9
MsG0580026983.01.T01 MTR_4g036050 51.613 62 30 0 1 62 1 62 3.14e-17 72.0
MsG0580026983.01.T01 MTR_4g036050 51.613 62 30 0 1 62 1 62 3.82e-17 72.0
MsG0580026983.01.T01 MTR_7g075870 59.322 59 24 0 1 59 1 59 6.25e-17 71.6
MsG0580026983.01.T01 MTR_7g075870 59.322 59 24 0 1 59 1 59 6.98e-17 71.6
MsG0580026983.01.T01 MTR_8g033220 55.738 61 27 0 1 61 1 61 1.24e-16 70.9
MsG0580026983.01.T01 MTR_8g033220 55.738 61 27 0 1 61 1 61 1.40e-16 70.9
MsG0580026983.01.T01 MTR_3g102570 48.649 74 32 1 1 68 1 74 8.19e-16 70.1
MsG0580026983.01.T01 MTR_8g079502 57.143 49 21 0 1 49 1 49 6.65e-15 65.9
MsG0580026983.01.T01 MTR_1g047550 57.143 49 21 0 1 49 1 49 1.84e-14 64.7
MsG0580026983.01.T01 MTR_2g085250 55.357 56 25 0 2 57 9 64 2.79e-14 65.1
MsG0580026983.01.T01 MTR_2g085280 55.357 56 25 0 2 57 9 64 2.88e-14 65.1
MsG0580026983.01.T01 MTR_3g052920 55.357 56 25 0 2 57 9 64 4.63e-14 64.3
MsG0580026983.01.T01 MTR_5g053390 53.571 56 26 0 2 57 9 64 6.40e-14 63.9
MsG0580026983.01.T01 MTR_1g063160 55.102 49 22 0 1 49 1 49 6.60e-14 63.2
MsG0580026983.01.T01 MTR_8g051580 42.857 70 40 0 1 70 1 70 7.51e-14 63.2
MsG0580026983.01.T01 MTR_4g131030 57.143 49 21 0 1 49 1 49 9.91e-14 63.2
MsG0580026983.01.T01 MTR_1g054265 53.061 49 23 0 1 49 1 49 1.22e-13 62.4
MsG0580026983.01.T01 MTR_2g030740 51.786 56 27 0 2 57 9 64 1.23e-13 63.2
MsG0580026983.01.T01 MTR_8g086290 44.928 69 38 0 2 70 12 80 1.48e-13 62.0
MsG0580026983.01.T01 MTR_3g052870 52.830 53 25 0 2 54 9 61 1.61e-13 62.8
MsG0580026983.01.T01 MTR_1g075600 53.571 56 26 0 2 57 9 64 1.79e-13 62.8
MsG0580026983.01.T01 MTR_1g077360 53.571 56 26 0 2 57 9 64 1.79e-13 62.8
MsG0580026983.01.T01 MTR_5g055100 55.357 56 25 0 2 57 9 64 1.90e-13 62.8
MsG0580026983.01.T01 MTR_2g105290 51.724 58 26 1 1 58 11 66 2.11e-13 61.6
MsG0580026983.01.T01 MTR_5g045560 52.632 57 27 0 1 57 8 64 3.29e-13 62.0
MsG0580026983.01.T01 MTR_1g012570 53.571 56 26 0 2 57 9 64 3.50e-13 62.0
MsG0580026983.01.T01 MTR_1g105920 50.000 56 28 0 2 57 9 64 3.65e-13 62.0
MsG0580026983.01.T01 MTR_8g043650 50.000 56 28 0 2 57 9 64 3.84e-13 62.0
MsG0580026983.01.T01 MTR_1g108510 52.830 53 25 0 2 54 9 61 4.08e-13 61.6
MsG0580026983.01.T01 MTR_3g030770 52.830 53 25 0 2 54 9 61 4.39e-13 61.6
MsG0580026983.01.T01 MTR_1g106070 52.830 53 25 0 2 54 9 61 4.51e-13 60.8
MsG0580026983.01.T01 MTR_2g093190 52.830 53 25 0 2 54 9 61 6.86e-13 61.2
MsG0580026983.01.T01 MTR_4g108720 49.057 53 27 0 1 53 1 53 9.58e-13 61.6
MsG0580026983.01.T01 MTR_1g105910 50.000 56 28 0 2 57 9 64 1.41e-12 60.5
MsG0580026983.01.T01 MTR_1g108580 50.943 53 26 0 2 54 9 61 1.55e-12 60.1
MsG0580026983.01.T01 MTR_8g046350 42.857 70 40 0 1 70 1 70 1.92e-12 58.9
MsG0580026983.01.T01 MTR_4g094632 41.429 70 38 1 1 67 1 70 2.04e-12 58.9
MsG0580026983.01.T01 MTR_0121s0100 41.667 72 39 1 2 70 9 80 4.47e-12 57.4
MsG0580026983.01.T01 MTR_1g041615 45.763 59 30 1 13 69 17 75 5.34e-12 57.4
MsG0580026983.01.T01 MTR_3g080940 50.943 53 26 0 1 53 8 60 1.96e-11 57.0
MsG0580026983.01.T01 MTR_0121s0080 48.276 58 28 1 2 57 7 64 2.56e-11 57.0
MsG0580026983.01.T01 MTR_5g041650 45.455 55 30 0 1 55 38 92 4.52e-11 57.0
MsG0580026983.01.T01 MTR_3g030780 47.170 53 28 0 2 54 9 61 5.41e-11 54.7
MsG0580026983.01.T01 MTR_4g094638 43.137 51 29 0 1 51 1 51 8.37e-11 55.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026983.01.T01 AT5G23260 71.429 63 18 0 1 63 1 63 1.69e-27 99.8
MsG0580026983.01.T01 AT5G23260 71.429 63 18 0 1 63 1 63 4.06e-27 99.0
MsG0580026983.01.T01 AT5G23260 71.429 63 18 0 1 63 17 79 7.21e-27 98.6
MsG0580026983.01.T01 AT5G23260 71.429 63 18 0 1 63 17 79 7.78e-27 98.6
MsG0580026983.01.T01 AT3G57230 58.462 65 27 0 1 65 1 65 2.64e-22 84.0
MsG0580026983.01.T01 AT2G14210 62.903 62 23 0 1 62 1 62 7.29e-22 85.1
MsG0580026983.01.T01 AT2G14210 62.903 62 23 0 1 62 1 62 8.80e-22 84.7
MsG0580026983.01.T01 AT5G13790 64.407 59 21 0 1 59 1 59 1.83e-21 84.7
MsG0580026983.01.T01 AT5G13790 64.407 59 21 0 1 59 1 59 1.85e-21 84.7
MsG0580026983.01.T01 AT1G24260 59.677 62 25 0 1 62 1 62 2.64e-21 83.6
MsG0580026983.01.T01 AT5G60910 52.000 75 27 1 1 66 1 75 3.41e-21 83.2
MsG0580026983.01.T01 AT1G26310 60.656 61 24 0 1 61 1 61 3.63e-21 83.6
MsG0580026983.01.T01 AT2G03710 62.712 59 22 0 1 59 1 59 3.66e-21 82.0
MsG0580026983.01.T01 AT1G24260 59.677 62 25 0 1 62 1 62 3.97e-21 83.2
MsG0580026983.01.T01 AT1G24260 59.677 62 25 0 1 62 1 62 4.25e-21 83.2
MsG0580026983.01.T01 AT5G20240 59.016 61 25 0 1 61 1 61 4.45e-21 80.9
MsG0580026983.01.T01 AT3G57230 58.462 65 27 0 1 65 1 65 8.64e-21 82.4
MsG0580026983.01.T01 AT3G57230 58.462 65 27 0 1 65 1 65 8.64e-21 82.4
MsG0580026983.01.T01 AT5G15800 59.677 62 25 0 1 62 1 62 8.73e-21 82.8
MsG0580026983.01.T01 AT4G09960 58.730 63 26 0 1 63 1 63 1.05e-20 81.6
MsG0580026983.01.T01 AT3G02310 58.065 62 26 0 1 62 1 62 1.08e-20 81.3
MsG0580026983.01.T01 AT4G09960 58.730 63 26 0 1 63 1 63 1.24e-20 81.6
MsG0580026983.01.T01 AT4G09960 58.730 63 26 0 1 63 2 64 1.27e-20 81.6
MsG0580026983.01.T01 AT4G09960 58.730 63 26 0 1 63 11 73 1.32e-20 81.6
MsG0580026983.01.T01 AT3G54340 58.065 62 26 0 1 62 1 62 1.40e-20 81.6
MsG0580026983.01.T01 AT3G02310 59.016 61 25 0 1 61 1 61 1.40e-20 82.0
MsG0580026983.01.T01 AT3G57390 62.712 59 22 0 1 59 1 59 1.50e-20 81.3
MsG0580026983.01.T01 AT5G51870 62.712 59 22 0 1 59 1 59 1.88e-20 80.1
MsG0580026983.01.T01 AT5G20240 60.345 58 23 0 1 58 1 58 2.00e-20 80.5
MsG0580026983.01.T01 AT4G09960 58.730 63 26 0 1 63 27 89 2.29e-20 81.6
MsG0580026983.01.T01 AT4G37940 56.923 65 28 0 1 65 1 65 2.51e-20 79.7
MsG0580026983.01.T01 AT2G03710 59.677 62 25 0 1 62 1 62 3.02e-20 81.3
MsG0580026983.01.T01 AT2G03710 59.677 62 25 0 1 62 1 62 3.13e-20 81.3
MsG0580026983.01.T01 AT4G37940 56.923 65 28 0 1 65 1 65 3.33e-20 80.1
MsG0580026983.01.T01 AT3G57390 62.712 59 22 0 1 59 1 59 3.41e-20 80.9
MsG0580026983.01.T01 AT3G58780 58.730 63 26 0 1 63 16 78 3.75e-20 81.3
MsG0580026983.01.T01 AT4G37940 56.923 65 28 0 1 65 1 65 5.02e-20 80.1
MsG0580026983.01.T01 AT5G15800 60.656 61 24 0 1 61 1 61 5.19e-20 80.5
MsG0580026983.01.T01 AT2G42830 58.730 63 26 0 1 63 16 78 5.23e-20 80.5
MsG0580026983.01.T01 AT5G51870 62.712 59 22 0 1 59 1 59 5.43e-20 79.7
MsG0580026983.01.T01 AT5G51870 62.712 59 22 0 1 59 24 82 5.62e-20 79.3
MsG0580026983.01.T01 AT2G42830 58.730 63 26 0 1 63 16 78 5.93e-20 80.1
MsG0580026983.01.T01 AT4G09960 58.730 63 26 0 1 63 96 158 6.58e-20 81.3
MsG0580026983.01.T01 AT2G22540 60.000 65 26 0 1 65 1 65 7.49e-20 79.7
MsG0580026983.01.T01 AT2G22540 60.000 65 26 0 1 65 1 65 7.49e-20 79.7
MsG0580026983.01.T01 AT4G18960 59.677 62 25 0 2 63 18 79 9.71e-20 79.7
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 1.03e-19 76.3
MsG0580026983.01.T01 AT5G51870 58.462 65 27 0 1 65 11 75 1.06e-19 79.3
MsG0580026983.01.T01 AT3G58780 58.730 63 26 0 1 63 16 78 1.12e-19 79.3
MsG0580026983.01.T01 AT5G51870 58.462 65 27 0 1 65 1 65 1.15e-19 79.0
MsG0580026983.01.T01 AT3G61120 61.017 59 23 0 1 59 1 59 1.23e-19 79.3
MsG0580026983.01.T01 AT3G58780 58.730 63 26 0 1 63 22 84 1.30e-19 79.3
MsG0580026983.01.T01 AT3G58780 56.716 67 29 0 1 67 16 82 1.57e-19 79.3
MsG0580026983.01.T01 AT2G22630 58.730 63 26 0 1 63 1 63 1.88e-19 78.6
MsG0580026983.01.T01 AT2G22630 58.730 63 26 0 1 63 1 63 1.88e-19 78.6
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 2.57e-19 76.6
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 2.57e-19 76.6
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 2.57e-19 76.6
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 2.57e-19 76.6
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 2.57e-19 76.6
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 3.61e-19 76.3
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 3.61e-19 76.3
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 3.61e-19 76.3
MsG0580026983.01.T01 AT2G45650 62.712 59 22 0 1 59 1 59 4.76e-19 77.8
MsG0580026983.01.T01 AT5G51860 58.730 63 26 0 1 63 1 63 6.41e-19 76.6
MsG0580026983.01.T01 AT3G30260 53.226 62 29 0 1 62 1 62 7.08e-19 77.4
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 8.78e-19 76.3
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 8.78e-19 76.3
MsG0580026983.01.T01 AT5G51860 58.730 63 26 0 1 63 1 63 9.15e-19 76.3
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 1.05e-18 76.3
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 1.05e-18 76.3
MsG0580026983.01.T01 AT5G62165 64.407 59 21 0 1 59 1 59 1.05e-18 76.3
MsG0580026983.01.T01 AT1G69120 55.738 61 27 0 1 61 1 61 1.19e-18 77.0
MsG0580026983.01.T01 AT4G11880 59.677 62 25 0 1 62 1 62 1.78e-18 75.1
MsG0580026983.01.T01 AT4G11880 59.677 62 25 0 1 62 1 62 1.78e-18 75.1
MsG0580026983.01.T01 AT5G10140 54.237 59 27 0 1 59 1 59 2.15e-18 75.1
MsG0580026983.01.T01 AT5G10140 54.237 59 27 0 1 59 1 59 2.17e-18 74.7
MsG0580026983.01.T01 AT3G58780 58.333 60 25 0 1 60 16 75 2.37e-18 75.9
MsG0580026983.01.T01 AT5G10140 54.237 59 27 0 1 59 1 59 2.45e-18 74.3
MsG0580026983.01.T01 AT4G11880 59.677 62 25 0 1 62 1 62 2.59e-18 75.5
MsG0580026983.01.T01 AT4G11880 59.677 62 25 0 1 62 1 62 2.59e-18 75.5
MsG0580026983.01.T01 AT1G69120 55.738 61 27 0 1 61 1 61 3.22e-18 75.5
MsG0580026983.01.T01 AT5G10140 54.237 59 27 0 1 59 1 59 4.86e-18 73.9
MsG0580026983.01.T01 AT4G22950 59.016 61 25 0 1 61 1 61 5.29e-18 73.6
MsG0580026983.01.T01 AT4G22950 59.016 61 25 0 1 61 1 61 8.67e-18 73.9
MsG0580026983.01.T01 AT4G22950 59.016 61 25 0 1 61 1 61 8.67e-18 73.9
MsG0580026983.01.T01 AT1G22130 50.000 74 31 1 1 68 1 74 1.01e-17 75.5
MsG0580026983.01.T01 AT5G65070 51.613 62 30 0 1 62 1 62 1.66e-17 71.6
MsG0580026983.01.T01 AT1G71692 54.839 62 28 0 1 62 1 62 2.24e-17 72.8
MsG0580026983.01.T01 AT2G45660 57.377 61 26 0 1 61 1 61 2.33e-17 71.6
MsG0580026983.01.T01 AT5G65070 50.000 74 36 1 1 74 1 73 2.74e-17 72.8
MsG0580026983.01.T01 AT5G65050 52.542 59 28 0 1 59 1 59 3.09e-17 71.6
MsG0580026983.01.T01 AT4G24540 58.462 65 27 0 1 65 1 65 3.14e-17 72.4
MsG0580026983.01.T01 AT5G65050 52.542 59 28 0 1 59 1 59 4.26e-17 71.6
MsG0580026983.01.T01 AT5G65070 51.613 62 30 0 1 62 1 62 4.58e-17 72.0
MsG0580026983.01.T01 AT5G65070 54.237 59 27 0 1 59 1 59 5.15e-17 71.6
MsG0580026983.01.T01 AT5G65050 52.542 59 28 0 1 59 1 59 5.65e-17 71.2
MsG0580026983.01.T01 AT5G65050 52.542 59 28 0 1 59 1 59 5.76e-17 71.6
MsG0580026983.01.T01 AT2G22540 66.667 54 18 0 1 54 1 54 6.04e-17 72.0
MsG0580026983.01.T01 AT2G45660 57.377 61 26 0 1 61 1 61 6.04e-17 71.6
MsG0580026983.01.T01 AT5G65070 54.237 59 27 0 1 59 1 59 7.74e-17 71.6
MsG0580026983.01.T01 AT1G77980 49.315 73 31 1 1 67 1 73 8.75e-17 72.8
MsG0580026983.01.T01 AT5G65060 52.542 59 28 0 1 59 1 59 2.27e-16 69.7
MsG0580026983.01.T01 AT5G65060 52.542 59 28 0 1 59 1 59 2.64e-16 69.7
MsG0580026983.01.T01 AT5G65060 52.542 59 28 0 1 59 1 59 2.72e-16 69.3
MsG0580026983.01.T01 AT5G65080 46.914 81 35 3 1 75 8 86 3.93e-16 69.3
MsG0580026983.01.T01 AT5G65080 55.556 54 24 0 1 54 8 61 2.79e-15 67.0
MsG0580026983.01.T01 AT1G77080 67.500 40 13 0 1 40 1 40 5.04e-14 63.5
MsG0580026983.01.T01 AT1G77080 67.500 40 13 0 1 40 1 40 6.17e-14 63.2
MsG0580026983.01.T01 AT1G31140 51.613 62 30 0 1 62 1 62 6.58e-14 63.5
MsG0580026983.01.T01 AT1G77080 67.500 40 13 0 1 40 1 40 6.76e-14 62.4
MsG0580026983.01.T01 AT1G31140 51.613 62 30 0 1 62 1 62 7.42e-14 63.5
MsG0580026983.01.T01 AT1G77080 67.500 40 13 0 1 40 1 40 1.15e-13 62.8
MsG0580026983.01.T01 AT1G77950 43.243 74 36 1 1 68 1 74 1.18e-13 63.5
MsG0580026983.01.T01 AT1G77950 43.243 74 36 1 1 68 1 74 1.18e-13 63.5
MsG0580026983.01.T01 AT1G77950 43.243 74 36 1 1 68 1 74 1.18e-13 63.5
MsG0580026983.01.T01 AT1G77950 43.243 74 36 1 1 68 1 74 1.18e-13 63.5
MsG0580026983.01.T01 AT1G77080 67.500 40 13 0 1 40 1 40 1.67e-13 62.4
MsG0580026983.01.T01 AT1G77080 67.500 40 13 0 1 40 1 40 1.85e-13 62.8
MsG0580026983.01.T01 AT3G66656 50.943 53 26 0 1 53 1 53 2.33e-13 61.6
MsG0580026983.01.T01 AT2G34440 52.830 53 25 0 1 53 1 53 2.47e-13 61.6
MsG0580026983.01.T01 AT1G72350 66.667 48 16 0 2 49 43 90 3.15e-13 62.0
MsG0580026983.01.T01 AT4G37435 51.852 54 26 0 1 54 1 54 4.74e-13 60.8
MsG0580026983.01.T01 AT2G03060 50.000 58 29 0 1 58 1 58 6.53e-13 62.0
MsG0580026983.01.T01 AT2G03060 50.000 58 29 0 1 58 1 58 6.53e-13 62.0
MsG0580026983.01.T01 AT2G03060 50.000 58 29 0 1 58 1 58 6.53e-13 62.0
MsG0580026983.01.T01 AT1G01530 52.830 53 25 0 1 53 6 58 8.03e-13 61.2
MsG0580026983.01.T01 AT2G03060 50.000 58 29 0 1 58 1 58 8.98e-13 61.6
MsG0580026983.01.T01 AT5G60440 46.429 56 30 0 2 57 7 62 1.08e-12 61.2
MsG0580026983.01.T01 AT1G18750 42.105 57 33 0 1 57 1 57 2.04e-12 60.8
MsG0580026983.01.T01 AT1G69540 49.091 55 28 0 1 55 1 55 2.24e-12 60.5
MsG0580026983.01.T01 AT1G69540 49.091 55 28 0 1 55 1 55 2.69e-12 60.5
MsG0580026983.01.T01 AT2G24840 54.717 53 24 0 1 53 62 114 8.70e-12 58.5
MsG0580026983.01.T01 AT3G04100 40.625 64 38 0 2 65 14 77 9.41e-12 57.8
MsG0580026983.01.T01 AT1G18750 38.710 62 38 0 1 62 1 62 1.65e-11 58.2
MsG0580026983.01.T01 AT1G18750 42.105 57 33 0 1 57 1 57 1.84e-11 58.2
MsG0580026983.01.T01 AT4G36590 51.786 56 27 0 2 57 7 62 2.45e-11 57.4

Find 4 sgRNAs with CRISPR-Local

Find 8 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAAATGTCAATTGCCTTG+TGG 0.610624 5:+50716245 None:intergenic
AGTATTGCTCTGATTCCACT+AGG 0.629625 5:-50716122 MsG0580026983.01.T01:CDS
GGGTAAATATATATACCTAG+TGG 0.638199 5:+50716107 None:intergenic
AGATTCAAAACAAAACCACA+AGG 0.742293 5:-50716260 MsG0580026983.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAATAAAAACAAAATAA+AGG + Chr5:50716285-50716304 None:intergenic 10.0%
!! ACATTTTCAAAAAGAAGAAC+TGG - Chr5:50716137-50716156 MsG0580026983.01.T01:CDS 25.0%
AGATTCAAAACAAAACCACA+AGG - Chr5:50716108-50716127 MsG0580026983.01.T01:CDS 30.0%
GGGTAAATATATATACCTAG+TGG + Chr5:50716264-50716283 None:intergenic 30.0%
TGAAAATGTCAATTGCCTTG+TGG + Chr5:50716126-50716145 None:intergenic 35.0%
AGTATTGCTCTGATTCCACT+AGG - Chr5:50716246-50716265 MsG0580026983.01.T01:CDS 40.0%
! GCAATACTGAGAGAGCTTTT+TGG + Chr5:50716234-50716253 None:intergenic 40.0%
!! AAAAATAAAAACAAAATAAA+GGG + Chr5:50716284-50716303 None:intergenic 5.0%
Chromosome Type Strat End Strand Name
Chr5 gene 50716080 50716310 50716080 ID=MsG0580026983.01;Name=MsG0580026983.01
Chr5 mRNA 50716080 50716310 50716080 ID=MsG0580026983.01.T01;Parent=MsG0580026983.01;Name=MsG0580026983.01.T01;_AED=0.16;_eAED=0.16;_QI=0|-1|0|1|-1|0|1|0|76
Chr5 exon 50716080 50716310 50716080 ID=MsG0580026983.01.T01:exon:28759;Parent=MsG0580026983.01.T01
Chr5 CDS 50716080 50716310 50716080 ID=MsG0580026983.01.T01:cds;Parent=MsG0580026983.01.T01
Gene Sequence

>MsG0580026983.01.T01

ATGGGTCGTGGGAAGATTGAGATTAAGAAGATTCAAAACAAAACCACAAGGCAATTGACATTTTCAAAAAGAAGAACTGGATTGTTGAAGAAGACTCGTGAGCTTTATGTACTATGTGAAGCTCAAATTAGACTCATCATTTTCTCAAGCACCAAAAAGCTCTCTCAGTATTGCTCTGATTCCACTAGGTATATATATTTACCCTTTATTTTGTTTTTATTTTTCTCTTAG

Protein sequence

>MsG0580026983.01.T01

MGRGKIEIKKIQNKTTRQLTFSKRRTGLLKKTRELYVLCEAQIRLIIFSSTKKLSQYCSDSTRYIYLPFILFLFFS*