AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027371.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027371.01.T01 MTR_5g085360 72.263 274 76 0 181 454 1 274 4.71e-130 402
MsG0580027371.01.T01 MTR_5g085340 72.563 277 74 2 181 457 1 275 1.49e-128 398
MsG0580027371.01.T01 MTR_5g085350 69.580 286 77 5 181 459 1 283 6.40e-120 375
MsG0580027371.01.T01 MTR_5g085350 69.580 286 77 5 181 459 1 283 7.34e-120 375
MsG0580027371.01.T01 MTR_3g116710 74.249 233 52 2 462 686 1 233 1.16e-117 352
MsG0580027371.01.T01 MTR_1g099140 78.926 242 44 2 458 692 3 244 1.88e-113 352
MsG0580027371.01.T01 MTR_2g090505 78.903 237 44 1 462 692 8 244 6.08e-110 335
MsG0580027371.01.T01 MTR_5g046145 72.881 236 47 3 451 678 31 257 5.43e-96 301
MsG0580027371.01.T01 MTR_5g032220 74.882 211 31 2 488 692 22 216 7.81e-83 271
MsG0580027371.01.T01 MTR_2g075320 60.714 168 35 2 7 174 112 248 4.43e-58 199
MsG0580027371.01.T01 MTR_3g051060 46.154 260 127 5 206 458 31 284 1.45e-56 205
MsG0580027371.01.T01 MTR_3g058550 53.439 189 81 2 231 412 3 191 1.65e-54 186
MsG0580027371.01.T01 MTR_3g093120 49.390 164 82 1 9 172 326 488 2.57e-48 178
MsG0580027371.01.T01 MTR_3g050500 43.411 258 128 9 191 443 15 259 2.10e-44 170
MsG0580027371.01.T01 MTR_0528s0010 68.269 104 33 0 588 691 1 104 5.33e-44 155
MsG0580027371.01.T01 MTR_7g026095 53.488 129 60 0 7 135 37 165 3.57e-43 159
MsG0580027371.01.T01 MTR_1g012760 43.353 173 90 3 519 691 36 200 4.53e-36 137
MsG0580027371.01.T01 MTR_1g012760 43.353 173 90 3 519 691 25 189 5.69e-36 137
MsG0580027371.01.T01 MTR_6g472230 40.244 164 98 0 8 171 5 168 2.33e-34 141
MsG0580027371.01.T01 MTR_1g058200 65.882 85 29 0 31 115 56 140 5.42e-33 124
MsG0580027371.01.T01 MTR_3g051020 43.293 164 88 3 199 362 22 180 9.34e-31 120
MsG0580027371.01.T01 MTR_6g060522 50.909 110 52 1 96 203 2 111 1.69e-29 116
MsG0580027371.01.T01 MTR_6g060910 60.000 90 36 0 30 119 35 124 4.80e-29 112
MsG0580027371.01.T01 MTR_2g020510 31.274 259 165 4 199 457 5 250 5.19e-29 123
MsG0580027371.01.T01 MTR_5g072970 67.089 79 26 0 613 691 33 111 5.57e-29 117
MsG0580027371.01.T01 MTR_6g029530 40.805 174 94 4 522 690 492 661 2.24e-28 121
MsG0580027371.01.T01 MTR_2g020470 30.888 259 168 5 199 457 5 252 4.54e-28 120
MsG0580027371.01.T01 MTR_7g056567 64.198 81 29 0 94 174 15 95 4.89e-28 110
MsG0580027371.01.T01 MTR_5g073000 65.432 81 28 0 611 691 109 189 4.76e-27 116
MsG0580027371.01.T01 MTR_2g020450 32.394 213 139 3 199 411 5 212 1.37e-24 109
MsG0580027371.01.T01 MTR_3g072200 39.041 146 85 2 546 690 60 202 3.10e-24 107
MsG0580027371.01.T01 MTR_2g067620 51.818 110 35 1 582 691 1 92 2.34e-23 106
MsG0580027371.01.T01 MTR_3g452820 35.294 170 69 4 2 171 28 156 1.20e-22 96.3
MsG0580027371.01.T01 MTR_3g077875 33.333 183 111 4 512 691 63 237 1.60e-21 95.9
MsG0580027371.01.T01 MTR_8g059225 39.175 97 58 1 75 171 75 170 1.47e-20 90.1
MsG0580027371.01.T01 MTR_3g015530 32.484 157 102 2 531 686 49 202 7.30e-20 90.1
MsG0580027371.01.T01 MTR_6g464570 37.063 143 86 3 521 661 5 145 8.43e-20 87.0
MsG0580027371.01.T01 MTR_3g034840 35.404 161 97 3 519 676 56 212 1.56e-19 88.2
MsG0580027371.01.T01 MTR_0599s0020 35.404 161 97 3 519 676 56 212 1.56e-19 88.2
MsG0580027371.01.T01 MTR_6g075990 28.509 228 147 5 466 690 20 234 4.93e-18 85.1
MsG0580027371.01.T01 MTR_4g119600 32.298 161 104 2 531 690 60 216 7.14e-18 85.9
MsG0580027371.01.T01 MTR_7g056020 31.481 162 85 2 530 689 382 519 2.99e-17 86.3
MsG0580027371.01.T01 MTR_7g050385 36.975 119 71 2 531 648 114 229 3.56e-17 81.6
MsG0580027371.01.T01 MTR_5g031650 31.757 148 96 2 531 677 82 225 4.59e-17 81.3
MsG0580027371.01.T01 MTR_1g081740 29.310 232 108 7 466 690 7 189 8.21e-17 79.7
MsG0580027371.01.T01 MTR_1g051400 35.106 94 61 0 39 132 73 166 8.90e-17 79.3
MsG0580027371.01.T01 MTR_8g011410 33.562 146 75 3 25 169 815 939 1.18e-16 84.7
MsG0580027371.01.T01 MTR_3g448730 39.535 86 51 1 90 175 102 186 1.53e-16 79.7
MsG0580027371.01.T01 MTR_3g087440 33.136 169 103 4 519 681 66 230 1.56e-16 80.1
MsG0580027371.01.T01 MTR_6g033925 35.922 103 63 1 9 111 38 137 3.99e-16 78.6
MsG0580027371.01.T01 MTR_2g014690 32.051 156 49 3 19 174 53 151 1.97e-15 75.9
MsG0580027371.01.T01 MTR_5g006100 31.214 173 112 3 522 691 45 213 2.38e-15 80.5
MsG0580027371.01.T01 MTR_4g120790 30.918 207 96 7 493 691 24 191 1.40e-14 73.9
MsG0580027371.01.T01 MTR_4g054900 42.466 73 40 1 77 149 95 165 2.67e-14 71.6
MsG0580027371.01.T01 MTR_8g107490 30.464 151 100 2 537 686 45 191 6.29e-14 73.6
MsG0580027371.01.T01 MTR_8g009330 28.365 208 135 4 447 653 6 200 1.97e-13 70.9
MsG0580027371.01.T01 MTR_3g030230 36.275 102 64 1 577 677 69 170 2.28e-13 69.3
MsG0580027371.01.T01 MTR_4g051638 34.375 128 74 3 529 649 115 239 3.29e-13 70.5
MsG0580027371.01.T01 MTR_3g437000 37.500 88 52 1 531 618 41 125 3.40e-13 67.4
MsG0580027371.01.T01 MTR_3g067290 31.429 140 91 2 552 690 83 218 3.78e-13 69.7
MsG0580027371.01.T01 MTR_4g057300 36.364 110 69 1 582 690 4 113 8.99e-13 70.5
MsG0580027371.01.T01 MTR_5g046160 31.293 147 81 3 546 691 55 182 1.14e-12 68.9
MsG0580027371.01.T01 MTR_0156s0040 36.522 115 70 2 580 691 2 116 1.83e-12 67.0
MsG0580027371.01.T01 MTR_4g057975 28.947 152 102 3 525 674 47 194 1.87e-12 67.4
MsG0580027371.01.T01 MTR_3g022740 28.814 177 71 5 2 171 1 129 1.88e-12 71.2
MsG0580027371.01.T01 MTR_8g016360 34.351 131 84 2 519 648 4 133 2.30e-12 65.1
MsG0580027371.01.T01 MTR_2g023130 29.444 180 73 3 513 691 15 141 2.63e-12 67.4
MsG0580027371.01.T01 MTR_1g058140 38.235 102 61 2 591 690 85 186 3.40e-12 67.4
MsG0580027371.01.T01 MTR_2g017930 27.869 183 123 3 236 411 36 216 3.60e-12 70.1
MsG0580027371.01.T01 MTR_8g068060 51.515 66 22 2 18 81 166 223 3.83e-12 67.4
MsG0580027371.01.T01 MTR_2g461140 27.807 187 100 5 506 691 22 174 4.10e-12 65.9
MsG0580027371.01.T01 MTR_4g100470 35.652 115 64 1 576 690 53 157 4.37e-12 66.2
MsG0580027371.01.T01 MTR_1g059880 33.684 95 59 2 546 639 86 177 1.17e-11 65.1
MsG0580027371.01.T01 MTR_2g067930 34.483 116 75 1 576 690 70 185 1.62e-11 64.3
MsG0580027371.01.T01 MTR_7g065910 36.207 116 62 3 579 691 33 139 1.66e-11 67.0
MsG0580027371.01.T01 MTR_5g025820 59.091 44 18 0 49 92 5 48 1.84e-11 60.5
MsG0580027371.01.T01 MTR_2g017850 27.692 130 79 2 21 150 192 306 6.12e-11 65.1
MsG0580027371.01.T01 MTR_8g096430 35.897 78 50 0 87 164 80 157 6.71e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027371.01.T01 AT4G23160 45.455 198 97 1 9 206 391 577 8.18e-50 188
MsG0580027371.01.T01 AT4G23160 45.455 198 97 1 9 206 391 577 8.18e-50 188

Find 153 sgRNAs with CRISPR-Local

Find 403 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGGAAAATCATTGATTTCT+TGG 0.196352 5:+59257759 MsG0580027371.01.T01:CDS
TCTTTAAGTTGGTAAGAATT+TGG 0.220682 5:-59263192 None:intergenic
AGAATATGCAAGTGTATTAT+TGG 0.234599 5:+59259616 MsG0580027371.01.T01:CDS
CTTGAAGATGCGCGTGATTC+CGG 0.236900 5:+59262647 MsG0580027371.01.T01:CDS
AGTACACATTGGAAGGTAAA+TGG 0.240510 5:+59259368 MsG0580027371.01.T01:CDS
GCGATCCTGGGAGAAAATTT+TGG 0.243157 5:+59259820 MsG0580027371.01.T01:CDS
TTCTGAGGTGGATCATCATT+TGG 0.247961 5:-59262593 None:intergenic
TCTTCCATTGCCACCGTTAT+CGG 0.250411 5:-59262894 None:intergenic
AAGTTTGAGGCATTGAAAAT+TGG 0.251459 5:+59259541 MsG0580027371.01.T01:CDS
ATTGCTTTGTGGGCTTGTTC+TGG 0.261649 5:-59259421 None:intergenic
ATCTTCTTTGTCCAAATCTA+TGG 0.276724 5:-59259479 None:intergenic
TCAAGGTGAACACTTTCATT+TGG 0.293795 5:-59263139 None:intergenic
TGTGGGAATTTATTAGAAAC+TGG 0.307449 5:-59261592 None:intergenic
TTCGTTTCTATAGCTCTATT+TGG 0.309713 5:+59261637 MsG0580027371.01.T01:CDS
AAGTAACCTCTCAACCAAAA+TGG 0.327975 5:-59263016 None:intergenic
CAAGGTGAACACTTTCATTT+GGG 0.330258 5:-59263138 None:intergenic
CCTAGACAAATTTCAAGTTT+TGG 0.337198 5:-59262686 None:intergenic
TCTGAGGTGGATCATCATTT+GGG 0.343477 5:-59262592 None:intergenic
CTTATACCATGGAAGCTTGC+TGG 0.343880 5:-59260825 None:intergenic
GATGTGAAAATCTGAATCTC+TGG 0.345534 5:-59257663 None:intergenic
TATTCTTCACACTGCGATCC+TGG 0.348196 5:+59259807 MsG0580027371.01.T01:CDS
AGTTTGAGGCATTGAAAATT+GGG 0.351710 5:+59259542 MsG0580027371.01.T01:CDS
ACTTGTTGACTGGTGGTGAT+TGG 0.353336 5:+59263035 MsG0580027371.01.T01:CDS
GAATATGCAAGTGTATTATT+GGG 0.356192 5:+59259617 MsG0580027371.01.T01:CDS
AATAAATTCCCACAGAAGTA+TGG 0.360597 5:+59261601 MsG0580027371.01.T01:CDS
CGAGAGAAAGCTAGGAATCT+TGG 0.363181 5:+59262848 MsG0580027371.01.T01:CDS
TGCTATTAATTGGAGAAAAC+AGG 0.366359 5:+59259708 MsG0580027371.01.T01:CDS
GACACAAGGAGATCCATTTC+AGG 0.366386 5:+59257722 MsG0580027371.01.T01:CDS
CTCAAAGGATGTCCAGGTTC+TGG 0.368225 5:+59257629 MsG0580027371.01.T01:CDS
CCGTGTTGCAAACTTGTGTT+TGG 0.371162 5:-59262804 None:intergenic
CTCTGCTTCTGAAGATGATC+TGG 0.371848 5:-59257807 None:intergenic
TCATGAAAGAACCAAGCATT+TGG 0.378282 5:+59257970 MsG0580027371.01.T01:CDS
AGCATTATAAACATGTTTGA+TGG 0.383472 5:-59263239 None:intergenic
ATTACATGTAGCCATAGATT+TGG 0.386158 5:+59259468 MsG0580027371.01.T01:CDS
TTAAATGTGAGTGTCCATTT+TGG 0.386884 5:+59263002 MsG0580027371.01.T01:CDS
TTGCAAATTGACCATCCCTT+TGG 0.390016 5:-59259755 None:intergenic
GGAGTTGATCCTTCTTTGTT+CGG 0.398013 5:-59260761 None:intergenic
TCATCATTTGGGGCATCAAC+AGG 0.413649 5:-59262581 None:intergenic
ATCAGAGATAATTGCTTTGT+GGG 0.419362 5:-59259431 None:intergenic
AAAGCAATTATCTCTGATTC+AGG 0.422580 5:+59259436 MsG0580027371.01.T01:CDS
CACTTTCATTTGGGTTTAGA+CGG 0.426558 5:-59263129 None:intergenic
GTCTACCATCACCAACTTTG+AGG 0.435920 5:-59263060 None:intergenic
GGTGGTACAACATGAGGAAT+AGG 0.436378 5:-59262737 None:intergenic
TTGAATCCACCATCTCTTCA+AGG 0.437759 5:-59263156 None:intergenic
TTCACTACAATGCTGGTATG+AGG 0.442706 5:+59257594 MsG0580027371.01.T01:CDS
ACTGTTCTCTCAGCATCCAT+TGG 0.442845 5:-59261529 None:intergenic
TTTAACACATAATAAGTTTG+AGG 0.443686 5:+59259528 MsG0580027371.01.T01:CDS
TCAATACAAACAGCAACAAC+TGG 0.445681 5:-59262761 None:intergenic
TTTGTAATATATGTTATGTC+AGG 0.447945 5:-59257536 None:intergenic
ACAGTTCCTCTTCTTTAAGT+TGG 0.449962 5:-59263203 None:intergenic
AAAAGAAGCGACAACACAAT+AGG 0.451684 5:-59262623 None:intergenic
AATCAGAGATAATTGCTTTG+TGG 0.451787 5:-59259432 None:intergenic
TTATTAGAAACTGGATCAGC+AGG 0.453134 5:-59261583 None:intergenic
AAGAGTCGGCGCGAGATAGC+TGG 0.465860 5:+59262974 MsG0580027371.01.T01:CDS
TGTTACTTTGATATGTGAAA+GGG 0.471195 5:+59262925 MsG0580027371.01.T01:CDS
TCGGCGCGAGATAGCTGGTT+TGG 0.471217 5:+59262979 MsG0580027371.01.T01:CDS
TTGCCACATTGTTAGAGAAA+AGG 0.478741 5:+59258000 MsG0580027371.01.T01:CDS
GATCTTCTTGTACGAAATGA+TGG 0.486632 5:+59259778 MsG0580027371.01.T01:CDS
TCAACACATTTGTTATGTCA+TGG 0.492113 5:-59263087 None:intergenic
TGCAACACGGAATGATTTGT+TGG 0.493878 5:+59262817 MsG0580027371.01.T01:CDS
CATTGCATATTGCGGCATCA+AGG 0.498195 5:+59259584 MsG0580027371.01.T01:CDS
GTACACATTGGAAGGTAAAT+GGG 0.499826 5:+59259369 MsG0580027371.01.T01:CDS
AGTCTGCATCTGAAAATCCT+TGG 0.499867 5:-59257685 None:intergenic
TTGTTACTTTGATATGTGAA+AGG 0.502488 5:+59262924 MsG0580027371.01.T01:CDS
CTTATAGAATCGTAGTCATC+GGG 0.505151 5:-59259343 None:intergenic
CCGACTCTTTCTCTTGTACT+CGG 0.508036 5:-59262960 None:intergenic
CACGGAATGATTTGTTGGAG+TGG 0.511090 5:+59262822 MsG0580027371.01.T01:CDS
TTGAGAGGTTACTTGTTGAC+TGG 0.514842 5:+59263025 MsG0580027371.01.T01:CDS
TCTACCATCACCAACTTTGA+GGG 0.517000 5:-59263059 None:intergenic
AAATATCTCAAAGGATGTCC+AGG 0.519074 5:+59257623 MsG0580027371.01.T01:CDS
GCATTGAAAATTGGGAATGA+GGG 0.521641 5:+59259550 MsG0580027371.01.T01:CDS
AAAGTTCCAGCAAGCTTCCA+TGG 0.522500 5:+59260819 MsG0580027371.01.T01:CDS
TCTATCAACAATTGTTGTCA+TGG 0.522678 5:-59259293 None:intergenic
ACTTATAGAATCGTAGTCAT+CGG 0.522793 5:-59259344 None:intergenic
TTGTTGCTGTTTGTATTGAC+CGG 0.524012 5:+59262765 MsG0580027371.01.T01:CDS
CCAAAACTTGAAATTTGTCT+AGG 0.525342 5:+59262686 MsG0580027371.01.T01:CDS
AAATCCGATAACGGTGGCAA+TGG 0.526390 5:+59262890 MsG0580027371.01.T01:CDS
TGTTGCAAACTTGTGTTTGG+TGG 0.526447 5:-59262801 None:intergenic
ACGGAATGATTTGTTGGAGT+GGG 0.526599 5:+59262823 MsG0580027371.01.T01:CDS
ATTGCATATTGCGGCATCAA+GGG 0.527165 5:+59259585 MsG0580027371.01.T01:CDS
GGCATTGAAAATTGGGAATG+AGG 0.527756 5:+59259549 MsG0580027371.01.T01:CDS
TCATCGGGTGAATTAATGTT+GGG 0.529005 5:-59259328 None:intergenic
ATGTGAAAATCTGAATCTCT+GGG 0.531725 5:-59257662 None:intergenic
GTCATCGGGTGAATTAATGT+TGG 0.532936 5:-59259329 None:intergenic
TATACGATTCGCTTATACCA+TGG 0.534534 5:-59260836 None:intergenic
CTTTGTTCGGATGTGTGCAA+AGG 0.535963 5:-59260748 None:intergenic
ATTCTTCACACTGCGATCCT+GGG 0.537455 5:+59259808 MsG0580027371.01.T01:CDS
CAGCTTCATGTGAGATGCAA+TGG 0.539558 5:+59257846 MsG0580027371.01.T01:CDS
AGACATTCGTGTGGAACCAA+TGG 0.541281 5:+59261513 MsG0580027371.01.T01:intron
TTCTTACCAACTTAAAGAAG+AGG 0.541308 5:+59263197 MsG0580027371.01.T01:CDS
GCAATCTATCTCCAAATGCT+TGG 0.541747 5:-59257981 None:intergenic
TCTCAAGTTCACTACAATGC+TGG 0.541832 5:+59257587 MsG0580027371.01.T01:CDS
TATCTTGCTCATATATCCAA+AGG 0.542355 5:+59259739 MsG0580027371.01.T01:CDS
GTAGTGAACTTGAGAAGGGT+TGG 0.543392 5:-59257579 None:intergenic
GCATTGTAGTGAACTTGAGA+AGG 0.545056 5:-59257584 None:intergenic
TGCACACATCCGAACAAAGA+AGG 0.545768 5:+59260752 MsG0580027371.01.T01:CDS
TTGAAAATTGGGAATGAGGG+TGG 0.553720 5:+59259553 MsG0580027371.01.T01:CDS
GTTATTGGTAAATCCGATAA+CGG 0.555749 5:+59262881 MsG0580027371.01.T01:CDS
GACATAACAAATGTGTTGAA+AGG 0.556363 5:+59263091 MsG0580027371.01.T01:CDS
ATCTTGCTCATATATCCAAA+GGG 0.558231 5:+59259740 MsG0580027371.01.T01:CDS
AGTGGGTTCGAGAGAAAGCT+AGG 0.558564 5:+59262840 MsG0580027371.01.T01:CDS
GTTACTTTGATATGTGAAAG+GGG 0.563272 5:+59262926 MsG0580027371.01.T01:CDS
TTGGTTCTTTCATGAAACAC+AGG 0.575029 5:-59257962 None:intergenic
TGCTCATATATCCAAAGGGA+TGG 0.583038 5:+59259744 MsG0580027371.01.T01:CDS
TGGTGGTAAAATGTTCTCGC+CGG 0.583144 5:-59262784 None:intergenic
TGTTCACCTTGAAGAGATGG+TGG 0.584190 5:+59263150 MsG0580027371.01.T01:CDS
AATATGCAAGTGTATTATTG+GGG 0.585799 5:+59259618 MsG0580027371.01.T01:CDS
TTGAAAGGTCATAAAACTGT+CGG 0.589415 5:+59263106 MsG0580027371.01.T01:CDS
TTGCATATTGCGGCATCAAG+GGG 0.590476 5:+59259586 MsG0580027371.01.T01:CDS
CATTGTAGTGAACTTGAGAA+GGG 0.591684 5:-59257583 None:intergenic
TTTGAAGGCTGAAGGTCTAG+TGG 0.592102 5:-59260798 None:intergenic
TCACTACAATGCTGGTATGA+GGG 0.593785 5:+59257595 MsG0580027371.01.T01:CDS
AGAAGCGACAACACAATAGG+AGG 0.594055 5:-59262620 None:intergenic
AGAGGTTACTTGTTGACTGG+TGG 0.598508 5:+59263028 MsG0580027371.01.T01:CDS
ACAAGGCACCATACTTCTGT+GGG 0.600019 5:-59261609 None:intergenic
CACAAGGCACCATACTTCTG+TGG 0.600148 5:-59261610 None:intergenic
ATAAGTGAGTACACATTGGA+AGG 0.601738 5:+59259361 MsG0580027371.01.T01:CDS
ATGTTTGATGGTAGTTGAAG+TGG 0.608295 5:-59263227 None:intergenic
ACAACATGAGGAATAGGAGG+AGG 0.610231 5:-59262731 None:intergenic
GGGAAGAAGATACCAGAACC+TGG 0.611069 5:-59257641 None:intergenic
AAGTTGTCACAGTAAATCAC+AGG 0.613117 5:-59257914 None:intergenic
TCTAGGCGGTTCGAAAGTAG+AGG 0.613520 5:+59262703 MsG0580027371.01.T01:CDS
GGTGATTGGACCCTCAAAGT+TGG 0.613622 5:+59263049 MsG0580027371.01.T01:CDS
GGTACAACATGAGGAATAGG+AGG 0.616924 5:-59262734 None:intergenic
CAAACAGCAACAACTGGAGG+TGG 0.617754 5:-59262755 None:intergenic
TTCTATAAGTGAGTACACAT+TGG 0.618566 5:+59259357 MsG0580027371.01.T01:CDS
AGGGTTCTCAAATATCTCAA+AGG 0.618594 5:+59257614 MsG0580027371.01.T01:CDS
TGGTTCTTTCATGAAACACA+GGG 0.622353 5:-59257961 None:intergenic
CTAGTGGCAAGAACTTTGAG+AGG 0.630821 5:-59260782 None:intergenic
AAGTGTTCACCTTGAAGAGA+TGG 0.631553 5:+59263147 MsG0580027371.01.T01:CDS
TCTTGCCAAAGACATTCGTG+TGG 0.636130 5:+59261504 MsG0580027371.01.T01:intron
ATCGGATTTACCAATAACAG+TGG 0.639307 5:-59262876 None:intergenic
ACAATAGGAGGTTCATTCTG+AGG 0.642037 5:-59262608 None:intergenic
AAACTTGAAATTTGTCTAGG+CGG 0.643765 5:+59262689 MsG0580027371.01.T01:CDS
CTGAGGTGGATCATCATTTG+GGG 0.645315 5:-59262591 None:intergenic
GGGAAGGTTGCAAAGACACA+AGG 0.651228 5:+59257708 MsG0580027371.01.T01:CDS
ACTGGAGGTGGTACAACATG+AGG 0.651621 5:-59262743 None:intergenic
AAGTTGGTAAGAATTTGGCT+CGG 0.652305 5:-59263187 None:intergenic
ATAGGAGGTTCATTCTGAGG+TGG 0.656033 5:-59262605 None:intergenic
TTGGTAAGAATTTGGCTCGG+AGG 0.657696 5:-59263184 None:intergenic
ATACAAACAGCAACAACTGG+AGG 0.659848 5:-59262758 None:intergenic
TGGACCCTCAAAGTTGGTGA+TGG 0.660067 5:+59263055 MsG0580027371.01.T01:CDS
TATGGCTACATGTAATGCAG+TGG 0.666695 5:-59259461 None:intergenic
CCAAACACAAGTTTGCAACA+CGG 0.667573 5:+59262804 MsG0580027371.01.T01:CDS
AGACACACCATTGCATATTG+CGG 0.677347 5:+59259576 MsG0580027371.01.T01:CDS
TTATTGGGGATAATGATGAG+AGG 0.677593 5:+59259632 MsG0580027371.01.T01:CDS
CTTGATGCCGCAATATGCAA+TGG 0.687436 5:-59259583 None:intergenic
ACTTTGATATGTGAAAGGGG+AGG 0.702845 5:+59262929 MsG0580027371.01.T01:CDS
TATAGAAACGAAATCACACA+AGG 0.710639 5:-59261626 None:intergenic
CCGAGTACAAGAGAAAGAGT+CGG 0.714747 5:+59262960 MsG0580027371.01.T01:CDS
TGTGAAAATCTGAATCTCTG+GGG 0.722438 5:-59257661 None:intergenic
ATTGGTAAATCCGATAACGG+TGG 0.729012 5:+59262884 MsG0580027371.01.T01:CDS
TGGATGCTGAGAGAACAGTG+AGG 0.871862 5:+59261533 MsG0580027371.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTAATTTTTTTTTTT+TGG - Chr5:59258925-59258944 None:intergenic 0.0%
!! ATATTAAAGAAAAATGTTAT+CGG + Chr5:59260532-59260551 MsG0580027371.01.T01:intron 10.0%
!! TTAAAAAATTTAAGAGTTTA+AGG + Chr5:59261289-59261308 MsG0580027371.01.T01:intron 10.0%
!!! ACATTTTTCTTTAATATTTA+TGG - Chr5:59260529-59260548 None:intergenic 10.0%
!!! ATAATATTTTGTCAAAAATA+TGG - Chr5:59260056-59260075 None:intergenic 10.0%
!!! ATTAACTATTTTTATAGATT+CGG + Chr5:59260246-59260265 MsG0580027371.01.T01:intron 10.0%
!!! ATTTTTAATCATATAATGAA+GGG - Chr5:59261453-59261472 None:intergenic 10.0%
!!! ATTTTTCTTTAATATTTATG+GGG - Chr5:59260527-59260546 None:intergenic 10.0%
!!! CATTTTTCTTTAATATTTAT+GGG - Chr5:59260528-59260547 None:intergenic 10.0%
!!! TAATTTTTTTTTTTTGGATA+CGG - Chr5:59258919-59258938 None:intergenic 10.0%
!! AAAAGGAAAGAATAAATTAA+TGG - Chr5:59259107-59259126 None:intergenic 15.0%
!! AAAGCTATTAAAATTAAGTA+AGG + Chr5:59261379-59261398 MsG0580027371.01.T01:intron 15.0%
!! AAAGGAAAGAATAAATTAAT+GGG - Chr5:59259106-59259125 None:intergenic 15.0%
!! AAAGGAATTATTACTATAAA+AGG + Chr5:59258575-59258594 MsG0580027371.01.T01:intron 15.0%
!! AAGCATAAATTAAACAAATT+TGG - Chr5:59261039-59261058 None:intergenic 15.0%
!! AAGTAATTAACATTCATTAT+AGG + Chr5:59260893-59260912 MsG0580027371.01.T01:intron 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - Chr5:59260967-59260986 None:intergenic 15.0%
!! AGATATAAGTAACAAAAATA+TGG - Chr5:59261158-59261177 None:intergenic 15.0%
!! AGTAATTAACATTCATTATA+GGG + Chr5:59260894-59260913 MsG0580027371.01.T01:intron 15.0%
!! GTAATAATATATTCATATGT+TGG + Chr5:59260868-59260887 MsG0580027371.01.T01:intron 15.0%
!! TATTTAAGTATTAGATTCTT+GGG + Chr5:59259209-59259228 MsG0580027371.01.T01:intron 15.0%
!! TTATTTAAGTATTAGATTCT+TGG + Chr5:59259208-59259227 MsG0580027371.01.T01:intron 15.0%
!! TTCAAAAAAATACATAATCT+AGG - Chr5:59258763-59258782 None:intergenic 15.0%
!! TTGACAAAATATTATATAGA+GGG + Chr5:59260061-59260080 MsG0580027371.01.T01:intron 15.0%
!! TTTGACAAAATATTATATAG+AGG + Chr5:59260060-59260079 MsG0580027371.01.T01:intron 15.0%
!!! AAACAAAATTTATTTTAGCA+GGG + Chr5:59261318-59261337 MsG0580027371.01.T01:intron 15.0%
!!! AAATTGTCGAATTTTATAAT+AGG + Chr5:59260088-59260107 MsG0580027371.01.T01:intron 15.0%
!!! AATTGTCGAATTTTATAATA+GGG + Chr5:59260089-59260108 MsG0580027371.01.T01:intron 15.0%
!!! AATTTTTGCGATATTTTTTT+CGG - Chr5:59261123-59261142 None:intergenic 15.0%
!!! ATAGTAATAATTCCTTTTTA+TGG - Chr5:59258572-59258591 None:intergenic 15.0%
!!! ATCTTATCTTCATTTAATTT+TGG + Chr5:59259873-59259892 MsG0580027371.01.T01:intron 15.0%
!!! ATTATAAAATTCGACAATTT+TGG - Chr5:59260088-59260107 None:intergenic 15.0%
!!! ATTTGTTATTTGTTTTAAGA+AGG - Chr5:59260637-59260656 None:intergenic 15.0%
!!! CATTTTTAATCATATAATGA+AGG - Chr5:59261454-59261473 None:intergenic 15.0%
!!! GTTTTAAATAAAGTTTTCAA+AGG - Chr5:59260022-59260041 None:intergenic 15.0%
!!! TAAACAAAATTTATTTTAGC+AGG + Chr5:59261317-59261336 MsG0580027371.01.T01:intron 15.0%
!!! TGTTATTGAAATTTTTTACA+AGG - Chr5:59260465-59260484 None:intergenic 15.0%
!!! TTAACTATTTTTATAGATTC+GGG + Chr5:59260247-59260266 MsG0580027371.01.T01:intron 15.0%
!! ATTATCCTCTCAAAAAAAAA+AGG - Chr5:59259124-59259143 None:intergenic 20.0%
!! ATTCTTGGGTATAAATATAA+CGG + Chr5:59259223-59259242 MsG0580027371.01.T01:intron 20.0%
!! GCTACTAATGTTATATAAAT+TGG - Chr5:59261911-59261930 None:intergenic 20.0%
!! TAGAGAAATAATGATACATT+AGG + Chr5:59259249-59259268 MsG0580027371.01.T01:intron 20.0%
!! TGATTAAACATACCATAAAA+AGG + Chr5:59258557-59258576 MsG0580027371.01.T01:intron 20.0%
!! TTATATAAATTGGCCAATTA+AGG - Chr5:59261901-59261920 None:intergenic 20.0%
!! TTCTTTAGGTAAAAATATGA+TGG - Chr5:59259917-59259936 None:intergenic 20.0%
!! TTTAACACATAATAAGTTTG+AGG + Chr5:59259528-59259547 MsG0580027371.01.T01:CDS 20.0%
!! TTTGTAATATATGTTATGTC+AGG - Chr5:59257539-59257558 None:intergenic 20.0%
!!! AAAGTGCGATTTTATTTTAT+AGG - Chr5:59260406-59260425 None:intergenic 20.0%
!!! AACTCATACTTGTTTTTTTT+AGG + Chr5:59260195-59260214 MsG0580027371.01.T01:intron 20.0%
!!! AAGAAAAAAAAGAGTATTGA+TGG - Chr5:59261691-59261710 None:intergenic 20.0%
!!! AAGTGCGATTTTATTTTATA+GGG - Chr5:59260405-59260424 None:intergenic 20.0%
!!! ATTGTCGAATTTTATAATAG+GGG + Chr5:59260090-59260109 MsG0580027371.01.T01:intron 20.0%
!!! GTTTTTCAACAATTTTTTAC+AGG + Chr5:59261069-59261088 MsG0580027371.01.T01:intron 20.0%
!!! TATAGGGTTAATTATGTTTT+TGG + Chr5:59260910-59260929 MsG0580027371.01.T01:intron 20.0%
!!! TCATATTTTTACCTAAAGAA+AGG + Chr5:59259917-59259936 MsG0580027371.01.T01:intron 20.0%
!!! TGTTGATATTTTCTCTTTTT+CGG - Chr5:59259977-59259996 None:intergenic 20.0%
!!! TTCCTTTTTCATATCTTTAA+CGG + Chr5:59258661-59258680 MsG0580027371.01.T01:intron 20.0%
!!! TTTTGCAAAATGGTAAAAAT+AGG + Chr5:59260119-59260138 MsG0580027371.01.T01:intron 20.0%
!!! TTTTTACCATTTTGCAAAAT+TGG - Chr5:59260118-59260137 None:intergenic 20.0%
! AAGAAGATGTGAAATACTTA+AGG + Chr5:59258506-59258525 MsG0580027371.01.T01:intron 25.0%
! AAGTATTTGGAAATGTTAAC+CGG - Chr5:59258700-59258719 None:intergenic 25.0%
! AATATGCAAGTGTATTATTG+GGG + Chr5:59259618-59259637 MsG0580027371.01.T01:CDS 25.0%
! AATTATTTAATGTCTGTGCA+TGG + Chr5:59261727-59261746 MsG0580027371.01.T01:intron 25.0%
! ACAAGGACTAAAAATGTTAA+TGG - Chr5:59260448-59260467 None:intergenic 25.0%
! AGAAGATGTGAAATACTTAA+GGG + Chr5:59258507-59258526 MsG0580027371.01.T01:intron 25.0%
! AGAATATGCAAGTGTATTAT+TGG + Chr5:59259616-59259635 MsG0580027371.01.T01:CDS 25.0%
! AGCATTATAAACATGTTTGA+TGG - Chr5:59263242-59263261 None:intergenic 25.0%
! ATATATGCATATGAAGGAAA+AGG + Chr5:59261851-59261870 MsG0580027371.01.T01:intron 25.0%
! CACACATAAACAATTACATA+AGG - Chr5:59260683-59260702 None:intergenic 25.0%
! CTTGTTTGCATTTATTAGAA+AGG - Chr5:59258800-59258819 None:intergenic 25.0%
! GAATATGCAAGTGTATTATT+GGG + Chr5:59259617-59259636 MsG0580027371.01.T01:CDS 25.0%
! GAGAAAATATATGCATATGA+AGG + Chr5:59261845-59261864 MsG0580027371.01.T01:intron 25.0%
! GTGTTAAGAACGTTATTAAA+AGG + Chr5:59261093-59261112 MsG0580027371.01.T01:intron 25.0%
! TATATGCATATGAAGGAAAA+GGG + Chr5:59261852-59261871 MsG0580027371.01.T01:intron 25.0%
! TCTAAAAAACACTCCATTTA+GGG + Chr5:59262284-59262303 MsG0580027371.01.T01:intron 25.0%
! TTGAGTCTTAAAAATGAACA+TGG + Chr5:59259664-59259683 MsG0580027371.01.T01:CDS 25.0%
! TTTAGGTAAAAATATGATGG+AGG - Chr5:59259914-59259933 None:intergenic 25.0%
!! TGAAGGGTTAAATATGTTTT+TGG - Chr5:59261437-59261456 None:intergenic 25.0%
!! TTGTCGAATTTTATAATAGG+GGG + Chr5:59260091-59260110 MsG0580027371.01.T01:intron 25.0%
!!! AGGAAAAATAGTCGTTTTTT+CGG + Chr5:59262173-59262192 MsG0580027371.01.T01:intron 25.0%
!!! CTTTTCTCTAGTTTCATAAT+AGG + Chr5:59258354-59258373 MsG0580027371.01.T01:intron 25.0%
!!! TAGGAAAATCATTGATTTCT+TGG + Chr5:59257759-59257778 MsG0580027371.01.T01:CDS 25.0%
!!! TCCTTTTTCATATCTTTAAC+GGG + Chr5:59258662-59258681 MsG0580027371.01.T01:intron 25.0%
!!! TCTTTAAGTTGGTAAGAATT+TGG - Chr5:59263195-59263214 None:intergenic 25.0%
!!! TCTTTCCTTTTTTTTTTGAG+AGG + Chr5:59259116-59259135 MsG0580027371.01.T01:intron 25.0%
!!! TGTTACTTTGATATGTGAAA+GGG + Chr5:59262925-59262944 MsG0580027371.01.T01:CDS 25.0%
!!! TTGTTACTTTGATATGTGAA+AGG + Chr5:59262924-59262943 MsG0580027371.01.T01:CDS 25.0%
!!! TTTTTCAAGCTGCTATTAAT+TGG + Chr5:59259698-59259717 MsG0580027371.01.T01:CDS 25.0%
!!! TTTTTCGGAAAAATGTAATC+TGG + Chr5:59262188-59262207 MsG0580027371.01.T01:intron 25.0%
!!! TTTTTTTTTTTTGGATACGG+TGG - Chr5:59258916-59258935 None:intergenic 25.0%
AAACTTGAAATTTGTCTAGG+CGG + Chr5:59262689-59262708 MsG0580027371.01.T01:CDS 30.0%
AAAGCAATTATCTCTGATTC+AGG + Chr5:59259436-59259455 MsG0580027371.01.T01:CDS 30.0%
AAGTAAGGACTAAACTTACA+AGG - Chr5:59260952-59260971 None:intergenic 30.0%
AAGTAAGGACTAAACTTAGA+AGG + Chr5:59261394-59261413 MsG0580027371.01.T01:intron 30.0%
AATAAATTCCCACAGAAGTA+TGG + Chr5:59261601-59261620 MsG0580027371.01.T01:CDS 30.0%
AATAGCACTTGTCTATCATT+GGG + Chr5:59261753-59261772 MsG0580027371.01.T01:intron 30.0%
AATCAGAGATAATTGCTTTG+TGG - Chr5:59259435-59259454 None:intergenic 30.0%
AATCGCTTAAAAATCGACTA+GGG - Chr5:59262403-59262422 None:intergenic 30.0%
ACCCGTTAAAGATATGAAAA+AGG - Chr5:59258666-59258685 None:intergenic 30.0%
ACTTATAGAATCGTAGTCAT+CGG - Chr5:59259347-59259366 None:intergenic 30.0%
ACTTGAAGAGTGAAAAATGT+AGG - Chr5:59259075-59259094 None:intergenic 30.0%
ATATAACATTAGTAGCTCAG+TGG + Chr5:59261915-59261934 MsG0580027371.01.T01:intron 30.0%
ATATGCATATGAAGGAAAAG+GGG + Chr5:59261853-59261872 MsG0580027371.01.T01:intron 30.0%
ATCAGAGATAATTGCTTTGT+GGG - Chr5:59259434-59259453 None:intergenic 30.0%
ATCATGTAATCCGAAATGAT+TGG + Chr5:59262017-59262036 MsG0580027371.01.T01:intron 30.0%
ATCTTCTTTGTCCAAATCTA+TGG - Chr5:59259482-59259501 None:intergenic 30.0%
ATCTTGCTCATATATCCAAA+GGG + Chr5:59259740-59259759 MsG0580027371.01.T01:CDS 30.0%
ATGTGAAAATCTGAATCTCT+GGG - Chr5:59257665-59257684 None:intergenic 30.0%
ATTACATGTAGCCATAGATT+TGG + Chr5:59259468-59259487 MsG0580027371.01.T01:CDS 30.0%
CCAAAACTTGAAATTTGTCT+AGG + Chr5:59262686-59262705 MsG0580027371.01.T01:CDS 30.0%
CTAGTTTCATAATAGGAAGA+AGG + Chr5:59258361-59258380 MsG0580027371.01.T01:intron 30.0%
GACATAACAAATGTGTTGAA+AGG + Chr5:59263091-59263110 MsG0580027371.01.T01:CDS 30.0%
GAGTGAAACATAAGATTACT+TGG + Chr5:59258204-59258223 MsG0580027371.01.T01:intron 30.0%
GTAACTTTATCTAGATGACA+AGG - Chr5:59259156-59259175 None:intergenic 30.0%
GTAATTGTTTATGTGTGTGA+TGG + Chr5:59260686-59260705 MsG0580027371.01.T01:intron 30.0%
GTTATTGGTAAATCCGATAA+CGG + Chr5:59262881-59262900 MsG0580027371.01.T01:CDS 30.0%
TATAGAAACGAAATCACACA+AGG - Chr5:59261629-59261648 None:intergenic 30.0%
TATAGATTCGGGAATTAGAT+AGG + Chr5:59260258-59260277 MsG0580027371.01.T01:intron 30.0%
TATCTTGCTCATATATCCAA+AGG + Chr5:59259739-59259758 MsG0580027371.01.T01:CDS 30.0%
TCATGTAATCCGAAATGATT+GGG + Chr5:59262018-59262037 MsG0580027371.01.T01:intron 30.0%
TCTATCAACAATTGTTGTCA+TGG - Chr5:59259296-59259315 None:intergenic 30.0%
TGATCTGTATTGTATTGTTC+CGG + Chr5:59262442-59262461 MsG0580027371.01.T01:intron 30.0%
TGCAAAATGGTAAAAATAGG+AGG + Chr5:59260122-59260141 MsG0580027371.01.T01:intron 30.0%
TGCTATTAATTGGAGAAAAC+AGG + Chr5:59259708-59259727 MsG0580027371.01.T01:CDS 30.0%
TGTGGGAATTTATTAGAAAC+TGG - Chr5:59261595-59261614 None:intergenic 30.0%
TTAATAGCAGCTTGAAAAAG+AGG - Chr5:59259697-59259716 None:intergenic 30.0%
TTACCTAAAGAAAGGTGATA+TGG + Chr5:59259925-59259944 MsG0580027371.01.T01:intron 30.0%
TTCTATAAGTGAGTACACAT+TGG + Chr5:59259357-59259376 MsG0580027371.01.T01:CDS 30.0%
TTCTTACCAACTTAAAGAAG+AGG + Chr5:59263197-59263216 MsG0580027371.01.T01:CDS 30.0%
TTGAAAGGTCATAAAACTGT+CGG + Chr5:59263106-59263125 MsG0580027371.01.T01:CDS 30.0%
TTGAAATTAGGACATGAGAA+TGG + Chr5:59259006-59259025 MsG0580027371.01.T01:intron 30.0%
! ATGTCGACGGAAAATTTTAT+AGG - Chr5:59260497-59260516 None:intergenic 30.0%
! ATTTACCAAAATTTTCTCCC+AGG - Chr5:59259828-59259847 None:intergenic 30.0%
! CAAGTTTAGAACACTATGAA+AGG - Chr5:59261255-59261274 None:intergenic 30.0%
! CTCTAAAAAACACTCCATTT+AGG + Chr5:59262283-59262302 MsG0580027371.01.T01:intron 30.0%
! GTTACTTTGATATGTGAAAG+GGG + Chr5:59262926-59262945 MsG0580027371.01.T01:CDS 30.0%
! TAGAAGGTCGCAATTTTATA+GGG + Chr5:59261410-59261429 MsG0580027371.01.T01:intron 30.0%
! TCTCACATTCTTTTTCCTTT+TGG - Chr5:59259042-59259061 None:intergenic 30.0%
! TGTCGACGGAAAATTTTATA+GGG - Chr5:59260496-59260515 None:intergenic 30.0%
! TTAAATGTGAGTGTCCATTT+TGG + Chr5:59263002-59263021 MsG0580027371.01.T01:CDS 30.0%
! TTAGAAGGTCGCAATTTTAT+AGG + Chr5:59261409-59261428 MsG0580027371.01.T01:intron 30.0%
! TTCGTTTCTATAGCTCTATT+TGG + Chr5:59261637-59261656 MsG0580027371.01.T01:CDS 30.0%
!! AAGTTTGAGGCATTGAAAAT+TGG + Chr5:59259541-59259560 MsG0580027371.01.T01:CDS 30.0%
!! AATTTTGAAAATGATGGAGG+AGG + Chr5:59261558-59261577 MsG0580027371.01.T01:CDS 30.0%
!! AGTTTGAGGCATTGAAAATT+GGG + Chr5:59259542-59259561 MsG0580027371.01.T01:CDS 30.0%
!! GAGGTCAATTTTGAAAATGA+TGG + Chr5:59261552-59261571 MsG0580027371.01.T01:CDS 30.0%
!! GTCAATTTTGAAAATGATGG+AGG + Chr5:59261555-59261574 MsG0580027371.01.T01:CDS 30.0%
!! TCAACACATTTGTTATGTCA+TGG - Chr5:59263090-59263109 None:intergenic 30.0%
!! TCCTGCTCATTTTTAATACA+GGG - Chr5:59262157-59262176 None:intergenic 30.0%
!! TTCCTGCTCATTTTTAATAC+AGG - Chr5:59262158-59262177 None:intergenic 30.0%
!!! AGTATGTGCTCATTTTAACT+TGG + Chr5:59258479-59258498 MsG0580027371.01.T01:intron 30.0%
!!! CAAATTTCAAGTTTTGGTTG+TGG - Chr5:59262683-59262702 None:intergenic 30.0%
!!! CCTAGACAAATTTCAAGTTT+TGG - Chr5:59262689-59262708 None:intergenic 30.0%
!!! CTAAATGGAGTGTTTTTTAG+AGG - Chr5:59262285-59262304 None:intergenic 30.0%
!!! GAGTGCAGAATTTTTTTGTA+GGG - Chr5:59260996-59261015 None:intergenic 30.0%
!!! TAATTTTGGTTCTCCTGTTT+TGG + Chr5:59259887-59259906 MsG0580027371.01.T01:intron 30.0%
!!! TGAGTGCAGAATTTTTTTGT+AGG - Chr5:59260997-59261016 None:intergenic 30.0%
!!! TTCTCTTTTTCGGATCATAT+AGG - Chr5:59259967-59259986 None:intergenic 30.0%
!!! TTTTGCGATATTTTTTTCGG+AGG - Chr5:59261120-59261139 None:intergenic 30.0%
AAAAGAAGCGACAACACAAT+AGG - Chr5:59262626-59262645 None:intergenic 35.0%
AAAATGTAATCTGGACAGCT+AGG + Chr5:59262197-59262216 MsG0580027371.01.T01:intron 35.0%
AAATATCTCAAAGGATGTCC+AGG + Chr5:59257623-59257642 MsG0580027371.01.T01:CDS 35.0%
AACCATATATTCGCCCTAAA+TGG - Chr5:59262300-59262319 None:intergenic 35.0%
AAGTAACCTCTCAACCAAAA+TGG - Chr5:59263019-59263038 None:intergenic 35.0%
AAGTTGTCACAGTAAATCAC+AGG - Chr5:59257917-59257936 None:intergenic 35.0%
ACAGTTCCTCTTCTTTAAGT+TGG - Chr5:59263206-59263225 None:intergenic 35.0%
ACCCTGTATTAAAAATGAGC+AGG + Chr5:59262153-59262172 MsG0580027371.01.T01:intron 35.0%
AGCAGTAATCTAGCTATAAG+GGG + Chr5:59262323-59262342 MsG0580027371.01.T01:intron 35.0%
AGGGTTCTCAAATATCTCAA+AGG + Chr5:59257614-59257633 MsG0580027371.01.T01:CDS 35.0%
AGTACACATTGGAAGGTAAA+TGG + Chr5:59259368-59259387 MsG0580027371.01.T01:CDS 35.0%
ATAAGTGAGTACACATTGGA+AGG + Chr5:59259361-59259380 MsG0580027371.01.T01:CDS 35.0%
ATATATCAACCTCCAACTTG+TGG + Chr5:59258145-59258164 MsG0580027371.01.T01:intron 35.0%
ATCGCTTAAAAATCGACTAG+GGG - Chr5:59262402-59262421 None:intergenic 35.0%
ATCGGATTTACCAATAACAG+TGG - Chr5:59262879-59262898 None:intergenic 35.0%
ATGGGGATAAAAAATGTCGA+CGG - Chr5:59260510-59260529 None:intergenic 35.0%
ATTCGGGAATTAGATAGGAA+AGG + Chr5:59260263-59260282 MsG0580027371.01.T01:intron 35.0%
CAAGGTGAACACTTTCATTT+GGG - Chr5:59263141-59263160 None:intergenic 35.0%
CAATAGCACTTGTCTATCAT+TGG + Chr5:59261752-59261771 MsG0580027371.01.T01:intron 35.0%
CAATGATAGACAAGTGCTAT+TGG - Chr5:59261754-59261773 None:intergenic 35.0%
CATTGTAGTGAACTTGAGAA+GGG - Chr5:59257586-59257605 None:intergenic 35.0%
CTAAAGAAAGGTGATATGGT+AGG + Chr5:59259929-59259948 MsG0580027371.01.T01:intron 35.0%
CTACCATATCACCTTTCTTT+AGG - Chr5:59259931-59259950 None:intergenic 35.0%
CTTATAGAATCGTAGTCATC+GGG - Chr5:59259346-59259365 None:intergenic 35.0%
GAATCGCTTAAAAATCGACT+AGG - Chr5:59262404-59262423 None:intergenic 35.0%
GAGATACTACAGTCTTGAAA+TGG - Chr5:59258826-59258845 None:intergenic 35.0%
GAGCAGTAATCTAGCTATAA+GGG + Chr5:59262322-59262341 MsG0580027371.01.T01:intron 35.0%
GATCTTCTTGTACGAAATGA+TGG + Chr5:59259778-59259797 MsG0580027371.01.T01:CDS 35.0%
GATGTGAAAATCTGAATCTC+TGG - Chr5:59257666-59257685 None:intergenic 35.0%
GCATTGAAAATTGGGAATGA+GGG + Chr5:59259550-59259569 MsG0580027371.01.T01:CDS 35.0%
GGTATGTTTAATCAATGTCC+CGG - Chr5:59258551-59258570 None:intergenic 35.0%
GTACACATTGGAAGGTAAAT+GGG + Chr5:59259369-59259388 MsG0580027371.01.T01:CDS 35.0%
GTATGTTTAATCAATGTCCC+GGG - Chr5:59258550-59258569 None:intergenic 35.0%
TATACGATTCGCTTATACCA+TGG - Chr5:59260839-59260858 None:intergenic 35.0%
TATATCAACCTCCAACTTGT+GGG + Chr5:59258146-59258165 MsG0580027371.01.T01:intron 35.0%
TATGCATATGAAGGAAAAGG+GGG + Chr5:59261854-59261873 MsG0580027371.01.T01:intron 35.0%
TATGTTTAATCAATGTCCCG+GGG - Chr5:59258549-59258568 None:intergenic 35.0%
TCAAGGTGAACACTTTCATT+TGG - Chr5:59263142-59263161 None:intergenic 35.0%
TCAATACAAACAGCAACAAC+TGG - Chr5:59262764-59262783 None:intergenic 35.0%
TCATAATAGGAAGAAGGCAA+CGG + Chr5:59258367-59258386 MsG0580027371.01.T01:intron 35.0%
TCATCGGGTGAATTAATGTT+GGG - Chr5:59259331-59259350 None:intergenic 35.0%
TCATGAAAGAACCAAGCATT+TGG + Chr5:59257970-59257989 MsG0580027371.01.T01:CDS 35.0%
TGGTTCTTTCATGAAACACA+GGG - Chr5:59257964-59257983 None:intergenic 35.0%
TGTGAAAATCTGAATCTCTG+GGG - Chr5:59257664-59257683 None:intergenic 35.0%
TTATTAGAAACTGGATCAGC+AGG - Chr5:59261586-59261605 None:intergenic 35.0%
TTATTGGGGATAATGATGAG+AGG + Chr5:59259632-59259651 MsG0580027371.01.T01:CDS 35.0%
TTCAAGACTGTAGTATCTCT+TGG + Chr5:59258827-59258846 MsG0580027371.01.T01:intron 35.0%
TTGCCACATTGTTAGAGAAA+AGG + Chr5:59258000-59258019 MsG0580027371.01.T01:CDS 35.0%
! AATGGCATGTTTTGTCCAAA+AGG + Chr5:59259024-59259043 MsG0580027371.01.T01:intron 35.0%
! ATGTTTGATGGTAGTTGAAG+TGG - Chr5:59263230-59263249 None:intergenic 35.0%
! ATTTTCTTACATTGACCACG+TGG - Chr5:59261816-59261835 None:intergenic 35.0%
! CACTTTCATTTGGGTTTAGA+CGG - Chr5:59263132-59263151 None:intergenic 35.0%
! CATTGTTAGAGAAAAGGTAC+AGG + Chr5:59258006-59258025 MsG0580027371.01.T01:intron 35.0%
! CATTTTTAATACAGGGTGTG+CGG - Chr5:59262150-59262169 None:intergenic 35.0%
! GATTCAGATTTTCACATCCA+AGG + Chr5:59257668-59257687 MsG0580027371.01.T01:CDS 35.0%
! GTACCTTTTCTCTAACAATG+TGG - Chr5:59258006-59258025 None:intergenic 35.0%
! GTGTTCTGAATTACGATTTC+TGG + Chr5:59262490-59262509 MsG0580027371.01.T01:intron 35.0%
! TCATGTGACTTGTGAAACTT+GGG + Chr5:59262054-59262073 MsG0580027371.01.T01:intron 35.0%
! TCATTTTCGTCTGAATGCAA+AGG + Chr5:59262357-59262376 MsG0580027371.01.T01:intron 35.0%
! TTACAAGGTCGCAATTTTGT+AGG - Chr5:59260937-59260956 None:intergenic 35.0%
! TTCATGTGACTTGTGAAACT+TGG + Chr5:59262053-59262072 MsG0580027371.01.T01:intron 35.0%
! TTGGTTCTTTCATGAAACAC+AGG - Chr5:59257965-59257984 None:intergenic 35.0%
! TTTAGGGCGAATATATGGTT+TGG + Chr5:59262300-59262319 MsG0580027371.01.T01:intron 35.0%
!! AAAAGAGTATTGATGGACGT+TGG - Chr5:59261684-59261703 None:intergenic 35.0%
!! AAGTTGGTAAGAATTTGGCT+CGG - Chr5:59263190-59263209 None:intergenic 35.0%
!! CTTGGTTTTTCCACTGTTAT+TGG + Chr5:59262866-59262885 MsG0580027371.01.T01:CDS 35.0%
!! GAAAAAGCATTGTCCTGAAA+TGG - Chr5:59257738-59257757 None:intergenic 35.0%
!! TCTCTAAGATGATGTATTCG+TGG - Chr5:59261959-59261978 None:intergenic 35.0%
!! TTGTTGCTGTTTGTATTGAC+CGG + Chr5:59262765-59262784 MsG0580027371.01.T01:CDS 35.0%
!!! ATTTCAAGTTTTGGTTGTGG+TGG - Chr5:59262680-59262699 None:intergenic 35.0%
!!! GAGTGTTTTTTAGAGGTGTA+GGG - Chr5:59262278-59262297 None:intergenic 35.0%
!!! TCAGGACAATGCTTTTTCAT+AGG + Chr5:59257740-59257759 MsG0580027371.01.T01:CDS 35.0%
!!! TTTCAAGTTTTGGTTGTGGT+GGG - Chr5:59262679-59262698 None:intergenic 35.0%
AACAAACTGCTGAAAGGTTG+AGG - Chr5:59258103-59258122 None:intergenic 40.0%
AAGTGTTCACCTTGAAGAGA+TGG + Chr5:59263147-59263166 MsG0580027371.01.T01:CDS 40.0%
ACAATAGGAGGTTCATTCTG+AGG - Chr5:59262611-59262630 None:intergenic 40.0%
ACAATCCGGAAAACTAAGTC+CGG + Chr5:59262094-59262113 MsG0580027371.01.T01:intron 40.0%
ACTTTGATATGTGAAAGGGG+AGG + Chr5:59262929-59262948 MsG0580027371.01.T01:CDS 40.0%
AGACACACCATTGCATATTG+CGG + Chr5:59259576-59259595 MsG0580027371.01.T01:CDS 40.0%
AGTCTGCATCTGAAAATCCT+TGG - Chr5:59257688-59257707 None:intergenic 40.0%
ATACAAACAGCAACAACTGG+AGG - Chr5:59262761-59262780 None:intergenic 40.0%
ATATCAACCTCCAACTTGTG+GGG + Chr5:59258147-59258166 MsG0580027371.01.T01:intron 40.0%
ATGTTTAATCAATGTCCCGG+GGG - Chr5:59258548-59258567 None:intergenic 40.0%
ATTGCATATTGCGGCATCAA+GGG + Chr5:59259585-59259604 MsG0580027371.01.T01:CDS 40.0%
CAGTAATCTAGCTATAAGGG+GGG + Chr5:59262325-59262344 MsG0580027371.01.T01:intron 40.0%
CCAAACACAAGTTTGCAACA+CGG + Chr5:59262804-59262823 MsG0580027371.01.T01:CDS 40.0%
CTTAAAAATCGACTAGGGGA+AGG - Chr5:59262398-59262417 None:intergenic 40.0%
GCAATCTATCTCCAAATGCT+TGG - Chr5:59257984-59258003 None:intergenic 40.0%
GCAGTAATCTAGCTATAAGG+GGG + Chr5:59262324-59262343 MsG0580027371.01.T01:intron 40.0%
GCATTGTAGTGAACTTGAGA+AGG - Chr5:59257587-59257606 None:intergenic 40.0%
GGAGCAGTAATCTAGCTATA+AGG + Chr5:59262321-59262340 MsG0580027371.01.T01:intron 40.0%
GGATTACATGATCCGAATTC+TGG - Chr5:59262009-59262028 None:intergenic 40.0%
GGCACAATATATGTGTAGAG+TGG - Chr5:59260662-59260681 None:intergenic 40.0%
GGGTGATTTCCCAATCATTT+CGG - Chr5:59262030-59262049 None:intergenic 40.0%
GGTAAGGGTTAAAGACAATC+CGG + Chr5:59262080-59262099 MsG0580027371.01.T01:intron 40.0%
GTCATCGGGTGAATTAATGT+TGG - Chr5:59259332-59259351 None:intergenic 40.0%
TATGGCTACATGTAATGCAG+TGG - Chr5:59259464-59259483 None:intergenic 40.0%
TCACTACAATGCTGGTATGA+GGG + Chr5:59257595-59257614 MsG0580027371.01.T01:CDS 40.0%
TCTACCATCACCAACTTTGA+GGG - Chr5:59263062-59263081 None:intergenic 40.0%
TCTCAAGTTCACTACAATGC+TGG + Chr5:59257587-59257606 MsG0580027371.01.T01:CDS 40.0%
TGCTCATATATCCAAAGGGA+TGG + Chr5:59259744-59259763 MsG0580027371.01.T01:CDS 40.0%
TGTTGCAAACTTGTGTTTGG+TGG - Chr5:59262804-59262823 None:intergenic 40.0%
TTCACAAGTCACATGAAGCA+GGG - Chr5:59262050-59262069 None:intergenic 40.0%
TTCACTACAATGCTGGTATG+AGG + Chr5:59257594-59257613 MsG0580027371.01.T01:CDS 40.0%
TTGAAAATTGGGAATGAGGG+TGG + Chr5:59259553-59259572 MsG0580027371.01.T01:CDS 40.0%
TTGAATCCACCATCTCTTCA+AGG - Chr5:59263159-59263178 None:intergenic 40.0%
TTGCAAATTGACCATCCCTT+TGG - Chr5:59259758-59259777 None:intergenic 40.0%
TTGGACAACAAACTGCTGAA+AGG - Chr5:59258109-59258128 None:intergenic 40.0%
TTTCACAAGTCACATGAAGC+AGG - Chr5:59262051-59262070 None:intergenic 40.0%
! AAGGATTTTCAGATGCAGAC+TGG + Chr5:59257687-59257706 MsG0580027371.01.T01:CDS 40.0%
! AGGATTTTCAGATGCAGACT+GGG + Chr5:59257688-59257707 MsG0580027371.01.T01:CDS 40.0%
! ATATGATGGAGGACCAAAAC+AGG - Chr5:59259903-59259922 None:intergenic 40.0%
! ATTGGTAAATCCGATAACGG+TGG + Chr5:59262884-59262903 MsG0580027371.01.T01:CDS 40.0%
! CTCCATTTAGGGCGAATATA+TGG + Chr5:59262295-59262314 MsG0580027371.01.T01:intron 40.0%
! GCAGTCTGGAATGTAATTTC+CGG - Chr5:59262464-59262483 None:intergenic 40.0%
! GGAGTTGATCCTTCTTTGTT+CGG - Chr5:59260764-59260783 None:intergenic 40.0%
! GGCATTGAAAATTGGGAATG+AGG + Chr5:59259549-59259568 MsG0580027371.01.T01:CDS 40.0%
! TCTGAGGTGGATCATCATTT+GGG - Chr5:59262595-59262614 None:intergenic 40.0%
! TGCAACACGGAATGATTTGT+TGG + Chr5:59262817-59262836 MsG0580027371.01.T01:CDS 40.0%
! TTGAGAGGTTACTTGTTGAC+TGG + Chr5:59263025-59263044 MsG0580027371.01.T01:CDS 40.0%
!! ACGGAATGATTTGTTGGAGT+GGG + Chr5:59262823-59262842 MsG0580027371.01.T01:CDS 40.0%
!! AGAGATTTACTTTTCCCACC+CGG + Chr5:59261974-59261993 MsG0580027371.01.T01:intron 40.0%
!! AGCAGTTTGTTGTCCAAGTT+GGG + Chr5:59258112-59258131 MsG0580027371.01.T01:intron 40.0%
!! CTTTTGATGCTTTGAGCTCA+TGG - Chr5:59258183-59258202 None:intergenic 40.0%
!! GGGAGTGTTTGTGATAAAAG+TGG - Chr5:59262258-59262277 None:intergenic 40.0%
!! TTCTGAGGTGGATCATCATT+TGG - Chr5:59262596-59262615 None:intergenic 40.0%
!!! AAGCTTGCTGGAACTTTTGA+AGG - Chr5:59260816-59260835 None:intergenic 40.0%
!!! GGAGTGTTTTTTAGAGGTGT+AGG - Chr5:59262279-59262298 None:intergenic 40.0%
!!! TTCAAGTTTTGGTTGTGGTG+GGG - Chr5:59262678-59262697 None:intergenic 40.0%
AAAGTTCCAGCAAGCTTCCA+TGG + Chr5:59260819-59260838 MsG0580027371.01.T01:CDS 45.0%
ACAACATGAGGAATAGGAGG+AGG - Chr5:59262734-59262753 None:intergenic 45.0%
ACCAATTAAGATGTGCCACG+TGG + Chr5:59261798-59261817 MsG0580027371.01.T01:intron 45.0%
ACCACGTGGCACATCTTAAT+TGG - Chr5:59261802-59261821 None:intergenic 45.0%
ACTGTTCTCTCAGCATCCAT+TGG - Chr5:59261532-59261551 None:intergenic 45.0%
AGAAGCGACAACACAATAGG+AGG - Chr5:59262623-59262642 None:intergenic 45.0%
AGACATTCGTGTGGAACCAA+TGG + Chr5:59261513-59261532 MsG0580027371.01.T01:intron 45.0%
AGTTGCACACCTATATACCC+AGG + Chr5:59258948-59258967 MsG0580027371.01.T01:intron 45.0%
ATTCTTCACACTGCGATCCT+GGG + Chr5:59259808-59259827 MsG0580027371.01.T01:CDS 45.0%
ATTGCAGTCCCTGGGTATAT+AGG - Chr5:59258960-59258979 None:intergenic 45.0%
CAGAACACTTGAATGCAGTC+TGG - Chr5:59262478-59262497 None:intergenic 45.0%
CAGCTTCATGTGAGATGCAA+TGG + Chr5:59257846-59257865 MsG0580027371.01.T01:CDS 45.0%
CATTGCATATTGCGGCATCA+AGG + Chr5:59259584-59259603 MsG0580027371.01.T01:CDS 45.0%
CCGACTCTTTCTCTTGTACT+CGG - Chr5:59262963-59262982 None:intergenic 45.0%
CCGAGTACAAGAGAAAGAGT+CGG + Chr5:59262960-59262979 MsG0580027371.01.T01:CDS 45.0%
CCGTGTTGCAAACTTGTGTT+TGG - Chr5:59262807-59262826 None:intergenic 45.0%
CGAAACGTAACTACTGTGTC+CGG - Chr5:59262116-59262135 None:intergenic 45.0%
CGAGAGAAAGCTAGGAATCT+TGG + Chr5:59262848-59262867 MsG0580027371.01.T01:CDS 45.0%
CGGACACAGTAGTTACGTTT+CGG + Chr5:59262114-59262133 MsG0580027371.01.T01:intron 45.0%
CTAGTGGCAAGAACTTTGAG+AGG - Chr5:59260785-59260804 None:intergenic 45.0%
CTGAGGTGGATCATCATTTG+GGG - Chr5:59262594-59262613 None:intergenic 45.0%
CTTATACCATGGAAGCTTGC+TGG - Chr5:59260828-59260847 None:intergenic 45.0%
CTTGATGCCGCAATATGCAA+TGG - Chr5:59259586-59259605 None:intergenic 45.0%
CTTTGTTCGGATGTGTGCAA+AGG - Chr5:59260751-59260770 None:intergenic 45.0%
GACACAAGGAGATCCATTTC+AGG + Chr5:59257722-59257741 MsG0580027371.01.T01:CDS 45.0%
GGTACAACATGAGGAATAGG+AGG - Chr5:59262737-59262756 None:intergenic 45.0%
GGTGGTACAACATGAGGAAT+AGG - Chr5:59262740-59262759 None:intergenic 45.0%
GTAGTGAACTTGAGAAGGGT+TGG - Chr5:59257582-59257601 None:intergenic 45.0%
GTCTACCATCACCAACTTTG+AGG - Chr5:59263063-59263082 None:intergenic 45.0%
GTGACCTGACACACCTTAAT+TGG + Chr5:59261885-59261904 MsG0580027371.01.T01:intron 45.0%
GTTGCACACCTATATACCCA+GGG + Chr5:59258949-59258968 MsG0580027371.01.T01:intron 45.0%
TACTTAAGGGTCCTGCTAAC+CGG + Chr5:59258520-59258539 MsG0580027371.01.T01:intron 45.0%
TATCAACCTCCAACTTGTGG+GGG + Chr5:59258148-59258167 MsG0580027371.01.T01:intron 45.0%
TATGTTGACCATCCCCAACT+TGG - Chr5:59258128-59258147 None:intergenic 45.0%
TATTCTTCACACTGCGATCC+TGG + Chr5:59259807-59259826 MsG0580027371.01.T01:CDS 45.0%
TCTTCCATTGCCACCGTTAT+CGG - Chr5:59262897-59262916 None:intergenic 45.0%
TGCACACATCCGAACAAAGA+AGG + Chr5:59260752-59260771 MsG0580027371.01.T01:CDS 45.0%
TGGTGGTAAAATGTTCTCGC+CGG - Chr5:59262787-59262806 None:intergenic 45.0%
TGGTTCCACACGAATGTCTT+TGG - Chr5:59261512-59261531 None:intergenic 45.0%
TGTTCACCTTGAAGAGATGG+TGG + Chr5:59263150-59263169 MsG0580027371.01.T01:CDS 45.0%
TTGCATATTGCGGCATCAAG+GGG + Chr5:59259586-59259605 MsG0580027371.01.T01:CDS 45.0%
TTGGCCAATTAAGGTGTGTC+AGG - Chr5:59261892-59261911 None:intergenic 45.0%
TTTGAAGGCTGAAGGTCTAG+TGG - Chr5:59260801-59260820 None:intergenic 45.0%
! AAATCCGATAACGGTGGCAA+TGG + Chr5:59262890-59262909 MsG0580027371.01.T01:CDS 45.0%
! ACAAGGCACCATACTTCTGT+GGG - Chr5:59261612-59261631 None:intergenic 45.0%
! ACTTGTTGACTGGTGGTGAT+TGG + Chr5:59263035-59263054 MsG0580027371.01.T01:CDS 45.0%
! AGAGGTTACTTGTTGACTGG+TGG + Chr5:59263028-59263047 MsG0580027371.01.T01:CDS 45.0%
! ATAGGAGGTTCATTCTGAGG+TGG - Chr5:59262608-59262627 None:intergenic 45.0%
! ATTGCTTTGTGGGCTTGTTC+TGG - Chr5:59259424-59259443 None:intergenic 45.0%
! CATGATCCGAATTCTGGAGA+AGG - Chr5:59262003-59262022 None:intergenic 45.0%
! CTCTGCTTCTGAAGATGATC+TGG - Chr5:59257810-59257829 None:intergenic 45.0%
! CTTCGCACTGTTTTCAGTCA+TGG + Chr5:59262553-59262572 MsG0580027371.01.T01:intron 45.0%
! GCGATCCTGGGAGAAAATTT+TGG + Chr5:59259820-59259839 MsG0580027371.01.T01:CDS 45.0%
! GGGGGACCAATTTTGCAAAA+TGG + Chr5:59260109-59260128 MsG0580027371.01.T01:intron 45.0%
! GTGAAACTTGGGCTTGGTAA+GGG + Chr5:59262065-59262084 MsG0580027371.01.T01:intron 45.0%
! GTTAGAGAAAAGGTACAGGC+AGG + Chr5:59258010-59258029 MsG0580027371.01.T01:intron 45.0%
! TCATCATTTGGGGCATCAAC+AGG - Chr5:59262584-59262603 None:intergenic 45.0%
! TGACTTGTGAAACTTGGGCT+TGG + Chr5:59262059-59262078 MsG0580027371.01.T01:intron 45.0%
! TGTGAAACTTGGGCTTGGTA+AGG + Chr5:59262064-59262083 MsG0580027371.01.T01:intron 45.0%
! TTTGTTGTCCAAGTTGGGGA+TGG + Chr5:59258117-59258136 MsG0580027371.01.T01:intron 45.0%
! TTTTCAGATGCAGACTGGGA+AGG + Chr5:59257692-59257711 MsG0580027371.01.T01:CDS 45.0%
!! CACGGAATGATTTGTTGGAG+TGG + Chr5:59262822-59262841 MsG0580027371.01.T01:CDS 45.0%
!! CAGCAGTTTGTTGTCCAAGT+TGG + Chr5:59258111-59258130 MsG0580027371.01.T01:intron 45.0%
!! CTGGAACTTTTGAAGGCTGA+AGG - Chr5:59260809-59260828 None:intergenic 45.0%
!! GCAGTTTGTTGTCCAAGTTG+GGG + Chr5:59258113-59258132 MsG0580027371.01.T01:intron 45.0%
!! TGTGTCCGGACTTAGTTTTC+CGG - Chr5:59262102-59262121 None:intergenic 45.0%
!! TTGGTAAGAATTTGGCTCGG+AGG - Chr5:59263187-59263206 None:intergenic 45.0%
!!! GAGTGTCCATTTTGGTTGAG+AGG + Chr5:59263010-59263029 MsG0580027371.01.T01:CDS 45.0%
!!! TCAAGTTTTGGTTGTGGTGG+GGG - Chr5:59262677-59262696 None:intergenic 45.0%
!! AAGAATATAAATAAAATATT+AGG - Chr5:59260327-59260346 None:intergenic 5.0%
!! TTAATAAAAAAATTGAAATT+AGG + Chr5:59258994-59259013 MsG0580027371.01.T01:intron 5.0%
!!! AATAATTTATTTTAAGTATT+TGG - Chr5:59258713-59258732 None:intergenic 5.0%
!!! ATAAGTAATTTTTTTTTATA+GGG + Chr5:59261350-59261369 MsG0580027371.01.T01:intron 5.0%
!!! CAAAATTTTAAATATTTATA+AGG - Chr5:59260374-59260393 None:intergenic 5.0%
!!! CAATTTTTTTATTAATTTTA+AGG - Chr5:59258989-59259008 None:intergenic 5.0%
!!! TATAAGTAATTTTTTTTTAT+AGG + Chr5:59261349-59261368 MsG0580027371.01.T01:intron 5.0%
ACTGGAGGTGGTACAACATG+AGG - Chr5:59262746-59262765 None:intergenic 50.0%
ATACCCAGGGACTGCAATAC+AGG + Chr5:59258962-59258981 MsG0580027371.01.T01:intron 50.0%
ATCAACCTCCAACTTGTGGG+GGG + Chr5:59258149-59258168 MsG0580027371.01.T01:intron 50.0%
CAAACAGCAACAACTGGAGG+TGG - Chr5:59262758-59262777 None:intergenic 50.0%
CGGTTGCCTTCTCCAGAATT+CGG + Chr5:59261994-59262013 MsG0580027371.01.T01:intron 50.0%
CTCAAAGGATGTCCAGGTTC+TGG + Chr5:59257629-59257648 MsG0580027371.01.T01:CDS 50.0%
CTTGAAGATGCGCGTGATTC+CGG + Chr5:59262647-59262666 MsG0580027371.01.T01:CDS 50.0%
GGGAAGAAGATACCAGAACC+TGG - Chr5:59257644-59257663 None:intergenic 50.0%
GGGAAGGTTGCAAAGACACA+AGG + Chr5:59257708-59257727 MsG0580027371.01.T01:CDS 50.0%
GGTGATTGGACCCTCAAAGT+TGG + Chr5:59263049-59263068 MsG0580027371.01.T01:CDS 50.0%
TACCCAGGGACTGCAATACA+GGG + Chr5:59258963-59258982 MsG0580027371.01.T01:intron 50.0%
TCTAGGCGGTTCGAAAGTAG+AGG + Chr5:59262703-59262722 MsG0580027371.01.T01:CDS 50.0%
TGGATGCTGAGAGAACAGTG+AGG + Chr5:59261533-59261552 MsG0580027371.01.T01:CDS 50.0%
TGTAATAGCCCCCCACAAGT+TGG - Chr5:59258160-59258179 None:intergenic 50.0%
! AGTGGGTTCGAGAGAAAGCT+AGG + Chr5:59262840-59262859 MsG0580027371.01.T01:CDS 50.0%
! ATATCTTTAACGGGTGCCCC+GGG + Chr5:59258671-59258690 MsG0580027371.01.T01:intron 50.0%
! CACAAGGCACCATACTTCTG+TGG - Chr5:59261613-59261632 None:intergenic 50.0%
! CATATCTTTAACGGGTGCCC+CGG + Chr5:59258670-59258689 MsG0580027371.01.T01:intron 50.0%
! CGAATTCTGGAGAAGGCAAC+CGG - Chr5:59261996-59262015 None:intergenic 50.0%
! GAATTCTGGAGAAGGCAACC+GGG - Chr5:59261995-59262014 None:intergenic 50.0%
! GGTCTGCTTCAGCTACGTTT+TGG - Chr5:59262237-59262256 None:intergenic 50.0%
!! TGGACCCTCAAAGTTGGTGA+TGG + Chr5:59263055-59263074 MsG0580027371.01.T01:CDS 50.0%
AAATGTTAACCGGTGCCCCG+GGG - Chr5:59258690-59258709 None:intergenic 55.0%
GAAATGTTAACCGGTGCCCC+GGG - Chr5:59258691-59258710 None:intergenic 55.0%
GGAAATGTTAACCGGTGCCC+CGG - Chr5:59258692-59258711 None:intergenic 55.0%
! AATAGCCCCCCACAAGTTGG+AGG - Chr5:59258157-59258176 None:intergenic 55.0%
! TATCTTTAACGGGTGCCCCG+GGG + Chr5:59258672-59258691 MsG0580027371.01.T01:intron 55.0%
! TGGTTGTGGTGGGGGATTTC+CGG - Chr5:59262669-59262688 None:intergenic 55.0%
AAGAGTCGGCGCGAGATAGC+TGG + Chr5:59262974-59262993 MsG0580027371.01.T01:CDS 60.0%
AGGCCCTGTATTGCAGTCCC+TGG - Chr5:59258969-59258988 None:intergenic 60.0%
GGCCCTGTATTGCAGTCCCT+GGG - Chr5:59258968-59258987 None:intergenic 60.0%
TCGGCGCGAGATAGCTGGTT+TGG + Chr5:59262979-59262998 MsG0580027371.01.T01:CDS 60.0%
TCTGGAGAAGGCAACCGGGT+GGG - Chr5:59261991-59262010 None:intergenic 60.0%
! AATCAATGTCCCGGGGGCAC+CGG - Chr5:59258542-59258561 None:intergenic 60.0%
! TTCTGGAGAAGGCAACCGGG+TGG - Chr5:59261992-59262011 None:intergenic 60.0%
GTCCTGCTAACCGGTGCCCC+CGG + Chr5:59258529-59258548 MsG0580027371.01.T01:intron 70.0%
TCCTGCTAACCGGTGCCCCC+GGG + Chr5:59258530-59258549 MsG0580027371.01.T01:intron 70.0%
! TAACGGGTGCCCCGGGGCAC+CGG + Chr5:59258678-59258697 MsG0580027371.01.T01:intron 75.0%
!! TCCCGGGGGCACCGGTTAGC+AGG - Chr5:59258534-59258553 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr5 gene 59257506 59263267 59257506 ID=MsG0580027371.01;Name=MsG0580027371.01
Chr5 mRNA 59257506 59263267 59257506 ID=MsG0580027371.01.T01;Parent=MsG0580027371.01;Name=MsG0580027371.01.T01;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|1|1|5|0|692
Chr5 exon 59257506 59258021 59257506 ID=MsG0580027371.01.T01:exon:13336;Parent=MsG0580027371.01.T01
Chr5 exon 59259271 59259841 59259271 ID=MsG0580027371.01.T01:exon:13337;Parent=MsG0580027371.01.T01
Chr5 exon 59260714 59260863 59260714 ID=MsG0580027371.01.T01:exon:13338;Parent=MsG0580027371.01.T01
Chr5 exon 59261515 59261658 59261515 ID=MsG0580027371.01.T01:exon:13339;Parent=MsG0580027371.01.T01
Chr5 exon 59262570 59263267 59262570 ID=MsG0580027371.01.T01:exon:13340;Parent=MsG0580027371.01.T01
Chr5 CDS 59257506 59258021 59257506 ID=MsG0580027371.01.T01:cds;Parent=MsG0580027371.01.T01
Chr5 CDS 59259271 59259841 59259271 ID=MsG0580027371.01.T01:cds;Parent=MsG0580027371.01.T01
Chr5 CDS 59260714 59260863 59260714 ID=MsG0580027371.01.T01:cds;Parent=MsG0580027371.01.T01
Chr5 CDS 59261515 59261658 59261515 ID=MsG0580027371.01.T01:cds;Parent=MsG0580027371.01.T01
Chr5 CDS 59262570 59263267 59262570 ID=MsG0580027371.01.T01:cds;Parent=MsG0580027371.01.T01
Gene Sequence

>MsG0580027371.01.T01

ATGTTGATGCACTGTCATCACACAACAAGACCTGACATAACATATATTACAAAGCAACTGAGTCAATTTCTCTCCAACCCTTCTCAAGTTCACTACAATGCTGGTATGAGGGTTCTCAAATATCTCAAAGGATGTCCAGGTTCTGGTATCTTCTTCCCCAGAGATTCAGATTTTCACATCCAAGGATTTTCAGATGCAGACTGGGAAGGTTGCAAAGACACAAGGAGATCCATTTCAGGACAATGCTTTTTCATAGGAAAATCATTGATTTCTTGGAGAACTAAGAAACAAATTACTGTTTCCAGATCATCTTCAGAAGCAGAGTATATAGCACTTGCATCAGCTTCATGTGAGATGCAATGGATGTTGTATTTGATGAAAGATCTTCAAGTTCAATGCAGCAAAACTCCTGTGATTTACTGTGACAACTTGAGTGCTATTCACATAGCAACACACCCTGTGTTTCATGAAAGAACCAAGCATTTGGAGATAGATTGCCACATTGTTAGAGAAAAGGATCAACAAATTAATTTTGCTACCATGACAACAATTGTTGATAGAGAGAACATATTACCCAACATTAATTCACCCGATGACTACGATTCTATAAGTGAGTACACATTGGAAGGTAAATGGGATAGTGTGATAAAGTTGTACAAAGAATGTCCAGAACAAGCCCACAAAGCAATTATCTCTGATTCAGGTGCCACTGCATTACATGTAGCCATAGATTTGGACAAAGAAGATGTTGTCAAAGAGCTTGTGAATGCAATTTTAACACATAATAAGTTTGAGGCATTGAAAATTGGGAATGAGGGTGGAGACACACCATTGCATATTGCGGCATCAAGGGGTTTTGATAGAATATGCAAGTGTATTATTGGGGATAATGATGAGAGGATATATTTGTTGAGTCTTAAAAATGAACATGGTGAGACACCTCTTTTTCAAGCTGCTATTAATTGGAGAAAACAGGCTTTTGCTTATCTTGCTCATATATCCAAAGGGATGGTCAATTTGCAAGATCTTCTTGTACGAAATGATGGTGATAGTATTCTTCACACTGCGATCCTGGGAGAAAATTTTGATTTAGCTGTGATAATAGCACATTACTATGATTTCCTTTGCACACATCCGAACAAAGAAGGATCAACTCCTCTCAAAGTTCTTGCCACTAGACCTTCAGCCTTCAAAAGTTCCAGCAAGCTTCCATGGTATAAGCGAATCGTATACAACTACATTCGTGTGGAACCAATGGATGCTGAGAGAACAGTGAGGTCAATTTTGAAAATGATGGAGGAGGATCCTGCTGATCCAGTTTCTAATAAATTCCCACAGAAGTATGGTGCCTTGTGTGATTTCGTTTCTATAGCTCTATTTGTCATGGTTGTTCCTGTTGATGCCCCAAATGATGATCCACCTCAGAATGAACCTCCTATTGTGTTGTCGCTTCTTTTACTTGAAGATGCGCGTGATTCCGGAAATCCCCCACCACAACCAAAACTTGAAATTTGTCTAGGCGGTTCGAAAGTAGAGGATGCTCCTCCTCCTATTCCTCATGTTGTACCACCTCCAGTTGTTGCTGTTTGTATTGACCGGCGAGAACATTTTACCACCAAACACAAGTTTGCAACACGGAATGATTTGTTGGAGTGGGTTCGAGAGAAAGCTAGGAATCTTGGTTTTTCCACTGTTATTGGTAAATCCGATAACGGTGGCAATGGAAGAAGCGCATTTGTTACTTTGATATGTGAAAGGGGAGGTTCATACACCGAGTACAAGAGAAAGAGTCGGCGCGAGATAGCTGGTTTGGTTAAATGTGAGTGTCCATTTTGGTTGAGAGGTTACTTGTTGACTGGTGGTGATTGGACCCTCAAAGTTGGTGATGGTAGACACAACCATGACATAACAAATGTGTTGAAAGGTCATAAAACTGTCGGCCGTCTAAACCCAAATGAAAGTGTTCACCTTGAAGAGATGGTGGATTCAAACGTTCCTCCGAGCCAAATTCTTACCAACTTAAAGAAGAGGAACTGTACCACTTCAACTACCATCAAACATGTTTATAATGCTACTTAA
Protein sequence

>MsG0580027371.01.T01

MLMHCHHTTRPDITYITKQLSQFLSNPSQVHYNAGMRVLKYLKGCPGSGIFFPRDSDFHIQGFSDADWEGCKDTRRSISGQCFFIGKSLISWRTKKQITVSRSSSEAEYIALASASCEMQWMLYLMKDLQVQCSKTPVIYCDNLSAIHIATHPVFHERTKHLEIDCHIVREKDQQINFATMTTIVDRENILPNINSPDDYDSISEYTLEGKWDSVIKLYKECPEQAHKAIISDSGATALHVAIDLDKEDVVKELVNAILTHNKFEALKIGNEGGDTPLHIAASRGFDRICKCIIGDNDERIYLLSLKNEHGETPLFQAAINWRKQAFAYLAHISKGMVNLQDLLVRNDGDSILHTAILGENFDLAVIIAHYYDFLCTHPNKEGSTPLKVLATRPSAFKSSSKLPWYKRIVYNYIRVEPMDAERTVRSILKMMEEDPADPVSNKFPQKYGALCDFVSIALFVMVVPVDAPNDDPPQNEPPIVLSLLLLEDARDSGNPPPQPKLEICLGGSKVEDAPPPIPHVVPPPVVAVCIDRREHFTTKHKFATRNDLLEWVREKARNLGFSTVIGKSDNGGNGRSAFVTLICERGGSYTEYKRKSRREIAGLVKCECPFWLRGYLLTGGDWTLKVGDGRHNHDITNVLKGHKTVGRLNPNESVHLEEMVDSNVPPSQILTNLKKRNCTTSTTIKHVYNAT*