AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027493.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027493.01.T01 MTR_5g060780 63.613 393 99 11 1 376 9 374 2.48e-154 449
MsG0580027493.01.T01 MTR_5g061890 64.491 383 97 10 1 368 9 367 3.71e-154 448
MsG0580027493.01.T01 MTR_5g460920 63.359 393 100 11 1 376 9 374 9.24e-154 447
MsG0580027493.01.T01 MTR_5g061220 47.797 454 167 14 1 407 16 446 1.43e-119 364
MsG0580027493.01.T01 MTR_5g060630 49.883 427 131 10 1 364 9 415 1.76e-115 354
MsG0580027493.01.T01 MTR_5g460740 49.883 427 131 10 1 364 9 415 1.76e-115 354
MsG0580027493.01.T01 MTR_1g058210 50.396 379 144 11 1 360 9 362 1.99e-110 338
MsG0580027493.01.T01 MTR_2g024430 46.530 389 160 13 1 370 17 376 6.20e-94 298
MsG0580027493.01.T01 MTR_5g040880 47.293 351 142 11 1 335 8 331 2.35e-83 270
MsG0580027493.01.T01 MTR_5g040740 49.206 315 132 9 1 296 9 314 5.89e-79 255
MsG0580027493.01.T01 MTR_2g006270 43.200 375 168 12 4 360 13 360 8.49e-77 251
MsG0580027493.01.T01 MTR_5g082140 44.795 317 145 10 1 296 9 316 1.19e-73 243
MsG0580027493.01.T01 MTR_2g006380 40.761 368 170 12 4 352 20 358 2.50e-72 239
MsG0580027493.01.T01 MTR_5g060770 46.646 328 97 9 53 373 7 263 1.99e-68 226
MsG0580027493.01.T01 MTR_5g062970 54.808 208 72 7 3 193 37 239 5.43e-63 207
MsG0580027493.01.T01 MTR_3g073420 32.051 546 248 19 1 478 16 506 4.22e-54 194
MsG0580027493.01.T01 MTR_5g460910 39.474 342 100 11 43 373 13 258 1.60e-48 172
MsG0580027493.01.T01 MTR_1g064430 31.277 470 217 15 1 392 37 478 6.15e-47 176
MsG0580027493.01.T01 MTR_1g064430 31.277 470 217 15 1 392 24 465 7.24e-47 175
MsG0580027493.01.T01 MTR_2g094570 34.637 358 162 13 1 296 8 355 5.44e-46 173
MsG0580027493.01.T01 MTR_2g094570 34.078 358 164 12 1 296 8 355 8.32e-46 172
MsG0580027493.01.T01 MTR_2g094570 34.637 358 162 13 1 296 64 411 1.00e-45 172
MsG0580027493.01.T01 MTR_1g094960 30.858 431 194 15 1 366 16 407 5.43e-43 163
MsG0580027493.01.T01 MTR_4g058930 34.066 364 162 12 1 296 9 362 3.29e-41 159
MsG0580027493.01.T01 MTR_4g058930 34.066 364 162 12 1 296 9 362 3.41e-41 159
MsG0580027493.01.T01 MTR_7g101280 27.731 476 229 16 1 392 28 472 2.85e-40 155
MsG0580027493.01.T01 MTR_0041s0110 27.731 476 229 16 1 392 28 472 2.85e-40 155
MsG0580027493.01.T01 MTR_7g101275 32.459 305 164 9 14 291 2 291 2.89e-38 146
MsG0580027493.01.T01 MTR_2g005240 30.374 428 209 17 4 396 23 396 3.33e-33 135
MsG0580027493.01.T01 MTR_2g018690 33.934 333 168 16 1 296 20 337 1.15e-32 134
MsG0580027493.01.T01 MTR_0041s0120 31.132 318 163 11 14 291 2 303 1.16e-31 127
MsG0580027493.01.T01 MTR_8g079492 32.024 331 176 14 1 296 20 336 5.13e-31 129
MsG0580027493.01.T01 MTR_8g100050 29.859 355 204 11 4 335 59 391 5.26e-31 129
MsG0580027493.01.T01 MTR_8g079492 32.024 331 176 14 1 296 20 336 5.57e-31 129
MsG0580027493.01.T01 MTR_8g100050 29.859 355 204 11 4 335 59 391 6.55e-31 128
MsG0580027493.01.T01 MTR_1g024025 31.944 288 174 7 1 267 40 326 9.71e-31 129
MsG0580027493.01.T01 MTR_2g014770 29.032 372 205 15 4 344 53 396 2.08e-30 126
MsG0580027493.01.T01 MTR_2g043250 33.677 291 165 12 1 268 20 305 2.09e-30 127
MsG0580027493.01.T01 MTR_2g014770 29.032 372 205 15 4 344 53 396 3.33e-30 126
MsG0580027493.01.T01 MTR_5g076270 32.733 333 172 16 1 296 21 338 3.70e-30 126
MsG0580027493.01.T01 MTR_4g088210 30.513 390 212 16 4 361 38 400 4.74e-30 125
MsG0580027493.01.T01 MTR_4g088210 30.513 390 212 16 4 361 38 400 6.24e-30 125
MsG0580027493.01.T01 MTR_2g093740 31.429 385 205 17 4 354 56 415 2.37e-29 124
MsG0580027493.01.T01 MTR_2g093740 33.673 294 153 12 4 260 56 344 2.69e-29 123
MsG0580027493.01.T01 MTR_2g093740 33.673 294 153 12 4 260 56 344 2.81e-29 124
MsG0580027493.01.T01 MTR_3g064050 32.268 313 166 14 1 282 23 320 3.51e-29 123
MsG0580027493.01.T01 MTR_4g124900 32.414 290 169 11 1 267 20 305 2.24e-28 121
MsG0580027493.01.T01 MTR_4g124900 32.414 290 169 11 1 267 20 305 2.39e-28 121
MsG0580027493.01.T01 MTR_4g021580 28.385 384 223 15 2 362 17 371 4.25e-28 119
MsG0580027493.01.T01 MTR_4g021580 28.385 384 223 15 2 362 17 371 4.64e-28 119
MsG0580027493.01.T01 MTR_2g093740 32.248 307 153 12 4 260 56 357 1.48e-27 118
MsG0580027493.01.T01 MTR_2g093740 32.248 307 153 12 4 260 56 357 1.60e-27 118
MsG0580027493.01.T01 MTR_2g093740 32.248 307 153 12 4 260 56 357 1.87e-27 118
MsG0580027493.01.T01 MTR_8g027440 29.428 367 215 14 4 350 29 371 3.84e-27 117
MsG0580027493.01.T01 MTR_7g062540 26.893 383 219 14 4 355 14 366 6.11e-27 116
MsG0580027493.01.T01 MTR_8g101360 33.480 227 107 7 1 197 28 240 1.78e-25 112
MsG0580027493.01.T01 MTR_4g060460 30.952 294 171 8 4 267 54 345 1.04e-23 106
MsG0580027493.01.T01 MTR_4g060460 30.952 294 171 8 4 267 54 345 1.21e-23 106
MsG0580027493.01.T01 MTR_5g062960 35.644 202 94 7 211 409 1 169 4.59e-22 94.7
MsG0580027493.01.T01 MTR_8g079492 30.075 266 143 12 62 296 1 254 4.35e-17 85.5
MsG0580027493.01.T01 MTR_8g446900 27.391 230 140 8 53 260 12 236 3.73e-15 77.8
MsG0580027493.01.T01 MTR_2g093740 29.720 286 157 13 93 354 20 285 8.25e-14 74.7
MsG0580027493.01.T01 MTR_2g093740 32.308 195 105 8 93 260 20 214 9.80e-14 74.7
MsG0580027493.01.T01 MTR_2g093740 28.428 299 157 13 93 354 20 298 3.41e-12 69.7
MsG0580027493.01.T01 MTR_2g093740 30.288 208 105 8 93 260 20 227 4.72e-12 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027493.01.T01 AT1G77850 31.520 533 260 21 1 466 16 510 2.81e-58 205
MsG0580027493.01.T01 AT1G77850 31.520 533 260 21 1 466 16 510 4.51e-58 205
MsG0580027493.01.T01 AT4G30080 30.913 482 222 17 1 405 16 463 1.84e-44 168
MsG0580027493.01.T01 AT2G28350 32.353 374 156 15 1 296 7 361 1.16e-37 149
MsG0580027493.01.T01 AT2G28350 32.353 374 156 15 1 296 7 361 1.35e-37 148
MsG0580027493.01.T01 AT3G61830 30.250 400 221 15 3 378 24 389 9.97e-35 139
MsG0580027493.01.T01 AT2G46530 30.469 384 210 14 3 362 20 370 9.89e-34 136
MsG0580027493.01.T01 AT2G46530 30.469 384 210 14 3 362 41 391 1.46e-33 136
MsG0580027493.01.T01 AT5G37020 31.845 336 171 16 1 296 19 336 2.70e-33 136
MsG0580027493.01.T01 AT5G37020 31.845 336 171 16 1 296 19 336 4.66e-33 135
MsG0580027493.01.T01 AT1G30330 32.903 310 168 12 1 282 20 317 3.06e-32 133
MsG0580027493.01.T01 AT1G30330 32.903 310 168 12 1 282 22 319 3.12e-32 133
MsG0580027493.01.T01 AT1G30330 32.903 310 168 12 1 282 22 319 3.12e-32 133
MsG0580027493.01.T01 AT2G33860 32.383 386 198 19 4 357 54 408 4.91e-32 131
MsG0580027493.01.T01 AT1G59750 32.177 317 186 11 4 296 22 333 5.60e-30 125
MsG0580027493.01.T01 AT1G59750 32.177 317 186 11 4 296 22 333 5.60e-30 125
MsG0580027493.01.T01 AT1G59750 32.177 317 186 11 4 296 22 333 6.13e-30 125
MsG0580027493.01.T01 AT1G59750 32.177 317 186 11 4 296 22 333 6.23e-30 125
MsG0580027493.01.T01 AT5G62000 29.006 362 198 12 4 335 61 393 3.32e-29 124
MsG0580027493.01.T01 AT5G62000 29.006 362 198 12 4 335 61 393 3.32e-29 124
MsG0580027493.01.T01 AT5G62000 29.006 362 198 12 4 335 61 393 3.32e-29 124
MsG0580027493.01.T01 AT5G62000 29.006 362 198 12 4 335 61 393 3.32e-29 124
MsG0580027493.01.T01 AT5G62000 29.006 362 198 12 4 335 61 393 4.23e-29 123
MsG0580027493.01.T01 AT1G19850 31.915 282 165 8 1 256 40 320 7.42e-29 122
MsG0580027493.01.T01 AT1G19850 31.915 282 165 8 1 256 51 331 7.71e-29 122
MsG0580027493.01.T01 AT1G35540 28.967 397 229 15 1 374 24 390 1.33e-28 120
MsG0580027493.01.T01 AT1G34390 31.310 313 177 11 1 291 24 320 3.14e-28 119
MsG0580027493.01.T01 AT5G20730 33.216 283 163 10 1 260 21 300 3.92e-28 120
MsG0580027493.01.T01 AT1G35520 31.429 315 176 12 1 291 24 322 5.52e-28 119
MsG0580027493.01.T01 AT5G20730 33.216 283 163 10 1 260 21 300 5.90e-28 120
MsG0580027493.01.T01 AT5G20730 33.333 282 163 10 1 260 21 299 9.45e-28 119
MsG0580027493.01.T01 AT1G34310 32.051 312 172 12 4 291 27 322 1.80e-27 117
MsG0580027493.01.T01 AT1G19220 31.494 308 173 12 1 282 20 315 3.23e-27 117
MsG0580027493.01.T01 AT1G34410 30.476 315 179 12 1 291 24 322 3.98e-27 116
MsG0580027493.01.T01 AT1G35240 31.111 315 177 12 1 291 24 322 5.26e-27 116
MsG0580027493.01.T01 AT5G60450 29.091 385 214 13 3 354 40 398 1.19e-26 115
MsG0580027493.01.T01 AT5G60450 29.091 385 214 13 3 354 64 422 1.38e-26 115
MsG0580027493.01.T01 AT4G23980 27.577 388 219 14 4 364 12 364 1.42e-26 115
MsG0580027493.01.T01 AT4G23980 27.577 388 219 14 4 364 12 364 1.73e-26 114
MsG0580027493.01.T01 AT1G34170 29.338 317 182 13 1 291 22 322 6.75e-23 102
MsG0580027493.01.T01 AT1G43950 33.816 207 113 7 1 191 24 222 1.32e-22 97.1
MsG0580027493.01.T01 AT3G61830 28.889 360 202 14 39 378 13 338 1.30e-21 99.4
MsG0580027493.01.T01 AT1G34170 31.373 255 141 10 1 229 22 268 2.25e-20 95.1
MsG0580027493.01.T01 AT1G34170 31.373 255 141 10 1 229 22 268 4.43e-20 94.4
MsG0580027493.01.T01 AT2G33860 30.909 275 144 14 104 357 2 251 6.21e-17 84.0
MsG0580027493.01.T01 AT5G37020 30.400 250 130 13 77 296 6 241 1.70e-15 80.5
MsG0580027493.01.T01 AT2G46530 28.625 269 154 10 103 354 36 283 8.24e-14 74.7

Find 156 sgRNAs with CRISPR-Local

Find 178 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTTATCATAGGTTAAA+TGG 0.116737 5:-62031277 MsG0580027493.01.T01:intron
TGTTTCCATCGTCGTCTTCT+TGG 0.207983 5:+62032327 None:intergenic
GATGAAAACAACGGAATCTT+TGG 0.224669 5:+62032088 None:intergenic
CGCAGAGTCGACTGATAATT+TGG 0.232255 5:-62030873 MsG0580027493.01.T01:CDS
ATAGTTAAATTTGAAGATTC+AGG 0.238302 5:+62031810 None:intergenic
ACCTTAAGCATGTGCCAATT+AGG 0.244625 5:+62031738 None:intergenic
GGTGGTTTCTGCGGGGTATT+AGG 0.250113 5:+62031248 None:intergenic
TAAACTTTAGAGTGAATCTT+TGG 0.260426 5:+62032554 None:intergenic
ATTCTTCTAATGTCCCTAAT+TGG 0.268826 5:-62031752 MsG0580027493.01.T01:CDS
TCTTGAGACTTCTGCAACTC+TGG 0.293011 5:+62032218 None:intergenic
ATGGTGATTGTGGCAGCATT+AGG 0.295879 5:+62032491 None:intergenic
TCACTTGGTGCTTGGCTCAT+TGG 0.308376 5:+62030448 None:intergenic
CTTGGTCTGTTACGGGAGTT+AGG 0.314595 5:+62032375 None:intergenic
CTACTTCCCACAAGGTCATT+TGG 0.318755 5:-62032531 MsG0580027493.01.T01:CDS
CTCGACTCTGCGCCCAAGTC+AGG 0.332469 5:+62030815 None:intergenic
ATGAAGATTGGTTGGAAATC+TGG 0.337904 5:-62031861 MsG0580027493.01.T01:CDS
ATGAAAACAACGGAATCTTT+GGG 0.342474 5:+62032089 None:intergenic
CAGTTCTAAAGGTGCGGACT+TGG 0.342634 5:-62030759 MsG0580027493.01.T01:CDS
CTCTTTATCATAGGTTAAAT+GGG 0.347475 5:-62031276 MsG0580027493.01.T01:intron
TCTTCAAATTTAACTATAAG+AGG 0.347983 5:-62031804 MsG0580027493.01.T01:CDS
CCAAGCTTTAGCCTTGTATC+AGG 0.353230 5:+62030920 None:intergenic
TGGTGATTGTGGCAGCATTA+GGG 0.354813 5:+62032492 None:intergenic
AGCGCATTTCTGCCATAGTT+TGG 0.354882 5:+62032595 None:intergenic
AGTGATACTTTGGCTGATAC+AGG 0.356278 5:-62030587 MsG0580027493.01.T01:CDS
AGTGATACTTTGGCGGATAC+AGG 0.358719 5:-62030794 MsG0580027493.01.T01:CDS
TTCTCACCTCTTTCAGCTGC+AGG 0.358959 5:+62032014 None:intergenic
GAGGGCAAAGCTTCGTTTGA+TGG 0.363032 5:-62031835 MsG0580027493.01.T01:CDS
GTCTCTGTCACTGACCTTCC+AGG 0.363192 5:-62032194 MsG0580027493.01.T01:CDS
AGTGGTACTTTGCTTGATAC+AGG 0.364586 5:-62031001 MsG0580027493.01.T01:CDS
CCACAGGAGGAGGAGGTTCT+TGG 0.364923 5:+62032357 None:intergenic
GCCACAATCACCATTCTTGA+TGG 0.366631 5:-62032482 MsG0580027493.01.T01:CDS
ATTAACTGAGAGTGCGGTCT+TGG 0.368633 5:-62031991 MsG0580027493.01.T01:CDS
AGGAGGTTCTTGGTCTGTTA+CGG 0.370719 5:+62032367 None:intergenic
CAGTTCTAAAGGTGCGGACT+TGG 0.371782 5:-62030552 MsG0580027493.01.T01:CDS
CAGTTCTAAAGGTGCGGACT+TGG 0.371782 5:-62030621 MsG0580027493.01.T01:CDS
GAAGAACTCTGAGATAGTTT+AGG 0.377530 5:+62031148 None:intergenic
CCTTAAGCATGTGCCAATTA+GGG 0.381506 5:+62031739 None:intergenic
AGATTTCCAACCAATCTTCA+TGG 0.383662 5:+62031863 None:intergenic
CAGTTCTAAAGGTGCATACT+TGG 0.394032 5:-62030690 MsG0580027493.01.T01:CDS
GGAGGTTCTTGGTCTGTTAC+GGG 0.397553 5:+62032368 None:intergenic
CCCTAATTGGCACATGCTTA+AGG 0.403221 5:-62031739 MsG0580027493.01.T01:CDS
ACACAATCTGATACTAAATC+TGG 0.404848 5:-62032278 MsG0580027493.01.T01:CDS
CAGTTCTAAAGGCGCTGACT+TGG 0.411550 5:-62030897 MsG0580027493.01.T01:CDS
GGTCTTGGGTGCAGTGGATT+TGG 0.411620 5:-62031976 MsG0580027493.01.T01:CDS
TTTATCCCACAGATGGGAAT+TGG 0.411809 5:-62031923 MsG0580027493.01.T01:CDS
CTCCTATGGACTCCAAACTA+TGG 0.424679 5:-62032607 None:intergenic
GTGTGGAGTTGTTGCCTCAT+AGG 0.439750 5:-62030472 MsG0580027493.01.T01:CDS
CACAGATTCGAGTGATACTT+TGG 0.444058 5:-62030597 MsG0580027493.01.T01:CDS
CTAAAGCTTGGCAGTTCTAA+AGG 0.450303 5:-62030632 MsG0580027493.01.T01:CDS
CTAAAGCTTGGCAGTTCTAA+AGG 0.450303 5:-62030701 MsG0580027493.01.T01:CDS
TACGGGAGTTAGGAGCAGTT+TGG 0.451525 5:+62032385 None:intergenic
GGTAATGGTGTCAGTGTACT+TGG 0.452357 5:+62031097 None:intergenic
ATCTTTGGAATCTTGACGTC+GGG 0.453371 5:+62032569 None:intergenic
CGCAGAGTCGAGTGATACTT+TGG 0.455775 5:-62030666 MsG0580027493.01.T01:CDS
CGCAGAGTCGAGTGATACTT+TGG 0.455775 5:-62030735 MsG0580027493.01.T01:CDS
CTAAAGCTTGGCAGTTCTAA+AGG 0.457123 5:-62030770 MsG0580027493.01.T01:CDS
CTAAAGCTTGGCAGTTCTAA+AGG 0.461797 5:-62030494 MsG0580027493.01.T01:CDS
ATAAACAGTGGAGGCGGTAA+TGG 0.462686 5:+62031082 None:intergenic
CTAAAGCTTGGCAGTTCTAA+AGG 0.463200 5:-62030908 MsG0580027493.01.T01:CDS
CACAGAGTCGAGTGATACTT+TGG 0.463899 5:-62030528 MsG0580027493.01.T01:CDS
CAGTTCTAAAGGCCCTGACT+TGG 0.463921 5:-62030828 MsG0580027493.01.T01:CDS
CATCTGGCATGCAAGGAGTC+AGG 0.465776 5:-62031054 MsG0580027493.01.T01:CDS
CGCAGAGTCGAGTGATACTT+TGG 0.467857 5:-62030804 MsG0580027493.01.T01:CDS
CTAAAGCTTGGCAGTTCTAA+AGG 0.468643 5:-62030839 MsG0580027493.01.T01:CDS
TTAACTGAGAGTGCGGTCTT+GGG 0.478339 5:-62031990 MsG0580027493.01.T01:CDS
AACTTCCCTGCAGCTGAAAG+AGG 0.482726 5:-62032020 MsG0580027493.01.T01:CDS
ATAAAGCTTGGCAGTTCTAA+AGG 0.485741 5:-62030563 MsG0580027493.01.T01:CDS
AGTTCTAAAGGCGCTGACTT+GGG 0.494023 5:-62030896 MsG0580027493.01.T01:CDS
GTATAGGTGTAGACTTTGCC+TGG 0.494583 5:+62032176 None:intergenic
GTAGATGATGCCATGAAGAT+TGG 0.497274 5:-62031873 MsG0580027493.01.T01:CDS
CATGGCATCATCTACAACCT+TGG 0.499201 5:+62031881 None:intergenic
AGTTCTAAAGGTGCGGACTT+GGG 0.500873 5:-62030758 MsG0580027493.01.T01:CDS
TCGACTCTGCGCCCAAGTCA+GGG 0.505174 5:+62030816 None:intergenic
AGTTCTAAAGGCCCTGACTT+GGG 0.505688 5:-62030827 MsG0580027493.01.T01:CDS
AAGATACCTCACTTGGTGCT+TGG 0.507669 5:+62030440 None:intergenic
CTTGATACAGGGCTAAAGCT+TGG 0.508063 5:-62030989 MsG0580027493.01.T01:CDS
TCTTCTTGGCCGTGAACCAC+AGG 0.514079 5:+62032341 None:intergenic
CCTCCTCCTCCTGTGGTTCA+CGG 0.519022 5:-62032350 MsG0580027493.01.T01:CDS
GAAGGTGCTGACTTGTTCGC+AGG 0.520378 5:-62031028 MsG0580027493.01.T01:CDS
GGAGATGTTGACAGTGGAGG+AGG 0.528074 5:+62031183 None:intergenic
GCTGATACAGTGCTAAAGCT+TGG 0.530738 5:-62030506 MsG0580027493.01.T01:CDS
GCGGATACAGGGCTAAAGCT+TGG 0.532091 5:-62030782 MsG0580027493.01.T01:CDS
CAACCTCCCAAGGATTGACC+AGG 0.532421 5:+62031224 None:intergenic
GCTGATACAGGGATAAAGCT+TGG 0.532500 5:-62030575 MsG0580027493.01.T01:CDS
AGGTGTAGACTTTGCCTGGA+AGG 0.536557 5:+62032180 None:intergenic
GCTGATACAGAGCTAAAGCT+TGG 0.537434 5:-62030851 MsG0580027493.01.T01:CDS
TGGCCGTGAACCACAGGAGG+AGG 0.540091 5:+62032347 None:intergenic
CCATGCATCGTCTCTACTGT+TGG 0.543464 5:-62032443 MsG0580027493.01.T01:CDS
AAATATATGTCGGAATTCGC+AGG 0.543716 5:-62032049 MsG0580027493.01.T01:CDS
CCTGATACAAGGCTAAAGCT+TGG 0.543990 5:-62030920 MsG0580027493.01.T01:CDS
GAGACGATGCATGGAATGGA+TGG 0.546365 5:+62032452 None:intergenic
AGTTCTAAAGGTGCGGACTT+GGG 0.546645 5:-62030551 MsG0580027493.01.T01:CDS
AGTTCTAAAGGTGCGGACTT+GGG 0.546645 5:-62030620 MsG0580027493.01.T01:CDS
TTGGTTGGAAATCTGGAATG+AGG 0.547760 5:-62031854 MsG0580027493.01.T01:CDS
CTTGGCTCATTGGACCTATG+AGG 0.550878 5:+62030458 None:intergenic
GCTGATACAAGGCTAAAGCT+TGG 0.556830 5:-62030644 MsG0580027493.01.T01:CDS
GCTGATACAAGGCTAAAGCT+TGG 0.556830 5:-62030713 MsG0580027493.01.T01:CDS
ATGATGCCATGAAGATTGGT+TGG 0.558711 5:-62031869 MsG0580027493.01.T01:CDS
AGTTCTAAAGGTGCATACTT+GGG 0.560941 5:-62030689 MsG0580027493.01.T01:CDS
GTGATACTTTGGCTGATACA+AGG 0.561337 5:-62030655 MsG0580027493.01.T01:CDS
GTGATACTTTGGCTGATACA+AGG 0.561337 5:-62030724 MsG0580027493.01.T01:CDS
CCGTGAACCACAGGAGGAGG+AGG 0.561880 5:+62032350 None:intergenic
GTGGTACTTTGCCTGATACA+AGG 0.562508 5:-62030931 MsG0580027493.01.T01:CDS
GAGTGCGGTCTTGGGTGCAG+TGG 0.564030 5:-62031982 MsG0580027493.01.T01:CDS
ATGCAAGGAGTCAGGCAAGA+AGG 0.567091 5:-62031046 MsG0580027493.01.T01:CDS
AAACTATGGCAGAAATGCGC+TGG 0.567239 5:-62032593 MsG0580027493.01.T01:CDS
GTGATACTTTGGCGGATACA+GGG 0.568488 5:-62030793 MsG0580027493.01.T01:CDS
ATTACACCAATTCCCATCTG+TGG 0.570163 5:+62031917 None:intergenic
AGTAGAGACGATGCATGGAA+TGG 0.572932 5:+62032448 None:intergenic
GACTTGTTCGCAGGGTCGAG+TGG 0.575371 5:-62031019 MsG0580027493.01.T01:CDS
AAACAGAGTAGACTAACTAA+AGG 0.575699 5:-62032146 MsG0580027493.01.T01:CDS
TGTTGTGGAGATGTTGACAG+TGG 0.578376 5:+62031177 None:intergenic
TCTCACCTCTTTCAGCTGCA+GGG 0.578496 5:+62032015 None:intergenic
CTGACTCCTTGCATGCCAGA+TGG 0.584361 5:+62031055 None:intergenic
CATGTTCCAAATGACCTTGT+GGG 0.588081 5:+62032525 None:intergenic
GGTGATTGTGGCAGCATTAG+GGG 0.588227 5:+62032493 None:intergenic
TGGTTGGAAATCTGGAATGA+GGG 0.589287 5:-62031853 MsG0580027493.01.T01:CDS
TGGACGGTAACCATCAAGAA+TGG 0.589526 5:+62032472 None:intergenic
ACCATCAAGAATGGTGATTG+TGG 0.590838 5:+62032481 None:intergenic
GTGGTACTTTGCTTGATACA+GGG 0.591580 5:-62031000 MsG0580027493.01.T01:CDS
CCAAGAACCTCCTCCTCCTG+TGG 0.595254 5:-62032357 MsG0580027493.01.T01:CDS
TTACACCAATTCCCATCTGT+GGG 0.595749 5:+62031918 None:intergenic
ACAGTGGAGGAGGAAGTTGA+CGG 0.601762 5:+62031193 None:intergenic
TGAAAACAACGGAATCTTTG+GGG 0.604042 5:+62032090 None:intergenic
TGCCATAGTTTGGAGTCCAT+AGG 0.605278 5:+62032605 None:intergenic
ATCAAGTCTGTGCATTGACG+AGG 0.606145 5:+62032245 None:intergenic
GCCAATGAAGATACCTCACT+TGG 0.608165 5:+62030433 None:intergenic
GCAAAGACCTCGTCGGTGTG+AGG 0.608714 5:+62032407 None:intergenic
GTGATACTTTGGCTGATACA+GGG 0.609258 5:-62030586 MsG0580027493.01.T01:CDS
GCTTGGCAGTTCTAAAGGTG+TGG 0.615631 5:-62030489 MsG0580027493.01.T01:CDS
CGATGCATGGAATGGATGGA+CGG 0.620709 5:+62032456 None:intergenic
CAGTGGAGGAGGAAGTTGAC+GGG 0.623769 5:+62031194 None:intergenic
TGTGGAGATGTTGACAGTGG+AGG 0.625945 5:+62031180 None:intergenic
AGAGTAGACTAACTAAAGGA+TGG 0.627717 5:-62032142 MsG0580027493.01.T01:CDS
GGGTAAACTTCAACCTCCCA+AGG 0.632620 5:+62031214 None:intergenic
GCATGTTCCAAATGACCTTG+TGG 0.633704 5:+62032524 None:intergenic
TTGTGTGAGAGTCTTGACAT+AGG 0.637006 5:+62032295 None:intergenic
AATCTTTGGAATCTTGACGT+CGG 0.641188 5:+62032568 None:intergenic
AAGGTGCTGACTTGTTCGCA+GGG 0.642119 5:-62031027 MsG0580027493.01.T01:CDS
CCAACAGTAGAGACGATGCA+TGG 0.649094 5:+62032443 None:intergenic
TCTTGGCCGTGAACCACAGG+AGG 0.650102 5:+62032344 None:intergenic
GCTTGGCAGTTCTAAAGGTG+CGG 0.654753 5:-62030558 MsG0580027493.01.T01:CDS
GCTTGGCAGTTCTAAAGGTG+CGG 0.654753 5:-62030627 MsG0580027493.01.T01:CDS
GCTTGGCAGTTCTAAAGGTG+CGG 0.654753 5:-62030765 MsG0580027493.01.T01:CDS
AATGAGCCAAGCACCAAGTG+AGG 0.655123 5:-62030446 None:intergenic
TGTTGATCCTCACACCGACG+AGG 0.655379 5:-62032414 MsG0580027493.01.T01:CDS
AGAGTCGAGTGATACTTTGG+CGG 0.658205 5:-62030801 MsG0580027493.01.T01:CDS
CAGTTTGGCAAAGACCTCGT+CGG 0.663811 5:+62032400 None:intergenic
GACTTGTTTGCAGAGTCGAG+TGG 0.669905 5:-62030950 MsG0580027493.01.T01:CDS
ACCTCCCAAGGATTGACCAG+GGG 0.672076 5:+62031226 None:intergenic
AACCTCCCAAGGATTGACCA+GGG 0.674108 5:+62031225 None:intergenic
CCTCCCAAGGATTGACCAGG+GGG 0.677450 5:+62031227 None:intergenic
AAAGTTTACTACTTCCCACA+AGG 0.678948 5:-62032539 MsG0580027493.01.T01:CDS
TGAGAAATTAACTGAGAGTG+CGG 0.683957 5:-62031997 MsG0580027493.01.T01:CDS
CACGGCCAAGAAGACGACGA+TGG 0.706758 5:-62032332 MsG0580027493.01.T01:CDS
GGATTTGGCTAACAAGAACG+TGG 0.730069 5:-62031961 MsG0580027493.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATGATAAAGAGATAAAAAA+TGG + Chr5:62031766-62031785 None:intergenic 15.0%
!!! ATTTTTTATCTCTTTATCAT+AGG - Chr5:62031765-62031784 MsG0580027493.01.T01:CDS 15.0%
!!! TAAATCAATCTTGTTTATTA+TGG + Chr5:62031399-62031418 None:intergenic 15.0%
!!! TTAAAGAATTTTGAATTTGT+CGG + Chr5:62031931-62031950 None:intergenic 15.0%
!! ATAGTTAAATTTGAAGATTC+AGG + Chr5:62031243-62031262 None:intergenic 20.0%
!! TCTTCAAATTTAACTATAAG+AGG - Chr5:62031246-62031265 MsG0580027493.01.T01:CDS 20.0%
!!! ATAAAATTTTGAGACTTAGT+AGG - Chr5:62031460-62031479 MsG0580027493.01.T01:intron 20.0%
!!! TAAAGAATTTTGAATTTGTC+GGG + Chr5:62031930-62031949 None:intergenic 20.0%
! ACGTAATCTACTTACATTAA+CGG + Chr5:62031595-62031614 None:intergenic 25.0%
! CTCTTTATCATAGGTTAAAT+GGG - Chr5:62031774-62031793 MsG0580027493.01.T01:CDS 25.0%
! TCTCTTTATCATAGGTTAAA+TGG - Chr5:62031773-62031792 MsG0580027493.01.T01:CDS 25.0%
!! AAAGAATTTTGAATTTGTCG+GGG + Chr5:62031929-62031948 None:intergenic 25.0%
!! AATTCCGACATATATTTTTC+CGG + Chr5:62030998-62031017 None:intergenic 25.0%
!! AGAGTTTTTGATGAAAACAA+CGG + Chr5:62030974-62030993 None:intergenic 25.0%
!!! GCTTTCTTATTTTGTTCTAA+TGG - Chr5:62031341-62031360 MsG0580027493.01.T01:intron 25.0%
!!! TAAACTTTAGAGTGAATCTT+TGG + Chr5:62030499-62030518 None:intergenic 25.0%
AAACAGAGTAGACTAACTAA+AGG - Chr5:62030904-62030923 MsG0580027493.01.T01:CDS 30.0%
ACACAATCTGATACTAAATC+TGG - Chr5:62030772-62030791 MsG0580027493.01.T01:CDS 30.0%
ATGAAAACAACGGAATCTTT+GGG + Chr5:62030964-62030983 None:intergenic 30.0%
ATTCTTCTAATGTCCCTAAT+TGG - Chr5:62031298-62031317 MsG0580027493.01.T01:intron 30.0%
CCAAAATAGAGATTCTACTT+AGG + Chr5:62031643-62031662 None:intergenic 30.0%
GGAAATAATAATGTAGCAGA+TGG + Chr5:62031551-62031570 None:intergenic 30.0%
TCATGAGATATCAAGAACAA+TGG + Chr5:62031572-62031591 None:intergenic 30.0%
! CCTAAGTAGAATCTCTATTT+TGG - Chr5:62031640-62031659 MsG0580027493.01.T01:intron 30.0%
! GAATTGGTGTAATTTTGTAG+TGG - Chr5:62031143-62031162 MsG0580027493.01.T01:CDS 30.0%
! TAACTATAAGAGGTTTTCAG+CGG - Chr5:62031256-62031275 MsG0580027493.01.T01:CDS 30.0%
!! TAGTTTAGGACTTTTTGTTG+TGG + Chr5:62031891-62031910 None:intergenic 30.0%
AAAGTTTACTACTTCCCACA+AGG - Chr5:62030511-62030530 MsG0580027493.01.T01:CDS 35.0%
AAATATATGTCGGAATTCGC+AGG - Chr5:62031001-62031020 MsG0580027493.01.T01:CDS 35.0%
AGAGTAGACTAACTAAAGGA+TGG - Chr5:62030908-62030927 MsG0580027493.01.T01:CDS 35.0%
AGATTTCCAACCAATCTTCA+TGG + Chr5:62031190-62031209 None:intergenic 35.0%
CCAGATGGAAAAATAAACAG+TGG + Chr5:62031983-62032002 None:intergenic 35.0%
GATGAAAACAACGGAATCTT+TGG + Chr5:62030965-62030984 None:intergenic 35.0%
GATGGAAAAATAAACAGTGG+AGG + Chr5:62031980-62031999 None:intergenic 35.0%
TCTGCCGGAAAAATATATGT+CGG - Chr5:62030991-62031010 MsG0580027493.01.T01:CDS 35.0%
TGAAAACAACGGAATCTTTG+GGG + Chr5:62030963-62030982 None:intergenic 35.0%
TGAGAAATTAACTGAGAGTG+CGG - Chr5:62031053-62031072 MsG0580027493.01.T01:CDS 35.0%
! AACTATAAGAGGTTTTCAGC+GGG - Chr5:62031257-62031276 MsG0580027493.01.T01:CDS 35.0%
! ATAAAGCTTGGCAGTTCTAA+AGG - Chr5:62032487-62032506 MsG0580027493.01.T01:CDS 35.0%
! ATGAAGATTGGTTGGAAATC+TGG - Chr5:62031189-62031208 MsG0580027493.01.T01:CDS 35.0%
! GTTTTCATCAAAAACTCTGC+CGG - Chr5:62030976-62030995 MsG0580027493.01.T01:CDS 35.0%
! TTGTGTTTTATCCCACAGAT+GGG - Chr5:62031121-62031140 MsG0580027493.01.T01:CDS 35.0%
!! AATCTTTGGAATCTTGACGT+CGG + Chr5:62030485-62030504 None:intergenic 35.0%
!! ACTCTGTTTTGAGTAGGTAT+AGG + Chr5:62030893-62030912 None:intergenic 35.0%
!! AGTTCTAAAGGTGCATACTT+GGG - Chr5:62032361-62032380 MsG0580027493.01.T01:CDS 35.0%
!! CCACTGTTTATTTTTCCATC+TGG - Chr5:62031980-62031999 MsG0580027493.01.T01:CDS 35.0%
!! GAAGAACTCTGAGATAGTTT+AGG + Chr5:62031905-62031924 None:intergenic 35.0%
!! TAGTCTACTCTGTTTTGAGT+AGG + Chr5:62030899-62030918 None:intergenic 35.0%
!!! TAATTTTGTAGTGGATGCCA+AGG - Chr5:62031152-62031171 MsG0580027493.01.T01:CDS 35.0%
ACCATCAAGAATGGTGATTG+TGG + Chr5:62030572-62030591 None:intergenic 40.0%
ACCTTAAGCATGTGCCAATT+AGG + Chr5:62031315-62031334 None:intergenic 40.0%
AGTGATACTTTGGCTGATAC+AGG - Chr5:62032325-62032344 MsG0580027493.01.T01:CDS 40.0%
AGTGGTACTTTGCTTGATAC+AGG - Chr5:62032049-62032068 MsG0580027493.01.T01:CDS 40.0%
ATGATGCCATGAAGATTGGT+TGG - Chr5:62031181-62031200 MsG0580027493.01.T01:CDS 40.0%
ATTACACCAATTCCCATCTG+TGG + Chr5:62031136-62031155 None:intergenic 40.0%
CACAGATTCGAGTGATACTT+TGG - Chr5:62032453-62032472 MsG0580027493.01.T01:CDS 40.0%
CATGTTCCAAATGACCTTGT+GGG + Chr5:62030528-62030547 None:intergenic 40.0%
CCTTAAGCATGTGCCAATTA+GGG + Chr5:62031314-62031333 None:intergenic 40.0%
GGAAAAATAAACAGTGGAGG+CGG + Chr5:62031977-62031996 None:intergenic 40.0%
GTAGATGATGCCATGAAGAT+TGG - Chr5:62031177-62031196 MsG0580027493.01.T01:CDS 40.0%
GTGATACTTTGGCTGATACA+AGG - Chr5:62032326-62032345 MsG0580027493.01.T01:CDS 40.0%
GTGATACTTTGGCTGATACA+GGG - Chr5:62032326-62032345 MsG0580027493.01.T01:CDS 40.0%
GTGGTACTTTGCTTGATACA+GGG - Chr5:62032050-62032069 MsG0580027493.01.T01:CDS 40.0%
TTACACCAATTCCCATCTGT+GGG + Chr5:62031135-62031154 None:intergenic 40.0%
TTGTGTGAGAGTCTTGACAT+AGG + Chr5:62030758-62030777 None:intergenic 40.0%
TTTATCCCACAGATGGGAAT+TGG - Chr5:62031127-62031146 MsG0580027493.01.T01:CDS 40.0%
! ATTTTTCCATCTGGCATGCA+AGG - Chr5:62031989-62032008 MsG0580027493.01.T01:CDS 40.0%
! CTAAAGCTTGGCAGTTCTAA+AGG - Chr5:62032073-62032092 MsG0580027493.01.T01:CDS 40.0%
! GTTGTGTTTTATCCCACAGA+TGG - Chr5:62031120-62031139 MsG0580027493.01.T01:CDS 40.0%
! TGGTTGGAAATCTGGAATGA+GGG - Chr5:62031197-62031216 MsG0580027493.01.T01:CDS 40.0%
! TTGGTTGGAAATCTGGAATG+AGG - Chr5:62031196-62031215 MsG0580027493.01.T01:CDS 40.0%
!! ATCTTTGGAATCTTGACGTC+GGG + Chr5:62030484-62030503 None:intergenic 40.0%
!! CAGTTCTAAAGGTGCATACT+TGG - Chr5:62032360-62032379 MsG0580027493.01.T01:CDS 40.0%
AAACTATGGCAGAAATGCGC+TGG - Chr5:62030457-62030476 MsG0580027493.01.T01:CDS 45.0%
AGAGTCGAGTGATACTTTGG+CGG - Chr5:62032249-62032268 MsG0580027493.01.T01:CDS 45.0%
AGCGCATTTCTGCCATAGTT+TGG + Chr5:62030458-62030477 None:intergenic 45.0%
AGGAGGTTCTTGGTCTGTTA+CGG + Chr5:62030686-62030705 None:intergenic 45.0%
AGTAGAGACGATGCATGGAA+TGG + Chr5:62030605-62030624 None:intergenic 45.0%
ATAAACAGTGGAGGCGGTAA+TGG + Chr5:62031971-62031990 None:intergenic 45.0%
ATGGTGATTGTGGCAGCATT+AGG + Chr5:62030562-62030581 None:intergenic 45.0%
CACAGAGTCGAGTGATACTT+TGG - Chr5:62032522-62032541 MsG0580027493.01.T01:CDS 45.0%
CATGGCATCATCTACAACCT+TGG + Chr5:62031172-62031191 None:intergenic 45.0%
CCCTAATTGGCACATGCTTA+AGG - Chr5:62031311-62031330 MsG0580027493.01.T01:intron 45.0%
CCTGATACAAGGCTAAAGCT+TGG - Chr5:62032130-62032149 MsG0580027493.01.T01:CDS 45.0%
CGCAGAGTCGACTGATAATT+TGG - Chr5:62032177-62032196 MsG0580027493.01.T01:CDS 45.0%
CTACTTCCCACAAGGTCATT+TGG - Chr5:62030519-62030538 MsG0580027493.01.T01:CDS 45.0%
CTTGATACAGGGCTAAAGCT+TGG - Chr5:62032061-62032080 MsG0580027493.01.T01:CDS 45.0%
GCATGTTCCAAATGACCTTG+TGG + Chr5:62030529-62030548 None:intergenic 45.0%
GCCACAATCACCATTCTTGA+TGG - Chr5:62030568-62030587 MsG0580027493.01.T01:CDS 45.0%
GCTGATACAAGGCTAAAGCT+TGG - Chr5:62032337-62032356 MsG0580027493.01.T01:CDS 45.0%
GCTGATACAGAGCTAAAGCT+TGG - Chr5:62032199-62032218 MsG0580027493.01.T01:CDS 45.0%
GCTGATACAGGGATAAAGCT+TGG - Chr5:62032475-62032494 MsG0580027493.01.T01:CDS 45.0%
GCTGATACAGTGCTAAAGCT+TGG - Chr5:62032544-62032563 MsG0580027493.01.T01:CDS 45.0%
GGATTTGGCTAACAAGAACG+TGG - Chr5:62031089-62031108 MsG0580027493.01.T01:CDS 45.0%
GTATAGGTGTAGACTTTGCC+TGG + Chr5:62030877-62030896 None:intergenic 45.0%
GTGGTACTTTGCCTGATACA+AGG - Chr5:62032119-62032138 MsG0580027493.01.T01:CDS 45.0%
TCTTGAGACTTCTGCAACTC+TGG + Chr5:62030835-62030854 None:intergenic 45.0%
TGGACGGTAACCATCAAGAA+TGG + Chr5:62030581-62030600 None:intergenic 45.0%
TGGTGATTGTGGCAGCATTA+GGG + Chr5:62030561-62030580 None:intergenic 45.0%
TGTTGTGGAGATGTTGACAG+TGG + Chr5:62031876-62031895 None:intergenic 45.0%
TGTTTCCATCGTCGTCTTCT+TGG + Chr5:62030726-62030745 None:intergenic 45.0%
! AGTGATACTTTGGCGGATAC+AGG - Chr5:62032256-62032275 MsG0580027493.01.T01:CDS 45.0%
! ATAAGAGGTTTTCAGCGGGA+GGG - Chr5:62031261-62031280 MsG0580027493.01.T01:CDS 45.0%
! ATCAAGTCTGTGCATTGACG+AGG + Chr5:62030808-62030827 None:intergenic 45.0%
! ATTAACTGAGAGTGCGGTCT+TGG - Chr5:62031059-62031078 MsG0580027493.01.T01:CDS 45.0%
! GGTAATGGTGTCAGTGTACT+TGG + Chr5:62031956-62031975 None:intergenic 45.0%
! GTGATACTTTGGCGGATACA+GGG - Chr5:62032257-62032276 MsG0580027493.01.T01:CDS 45.0%
! TATAAGAGGTTTTCAGCGGG+AGG - Chr5:62031260-62031279 MsG0580027493.01.T01:CDS 45.0%
! TTAACTGAGAGTGCGGTCTT+GGG - Chr5:62031060-62031079 MsG0580027493.01.T01:CDS 45.0%
!! AGTTCTAAAGGCCCTGACTT+GGG - Chr5:62032223-62032242 MsG0580027493.01.T01:CDS 45.0%
!! AGTTCTAAAGGCGCTGACTT+GGG - Chr5:62032154-62032173 MsG0580027493.01.T01:CDS 45.0%
!! AGTTCTAAAGGTGCGGACTT+GGG - Chr5:62032292-62032311 MsG0580027493.01.T01:CDS 45.0%
!! CCAAGCTTTAGCCTTGTATC+AGG + Chr5:62032133-62032152 None:intergenic 45.0%
AACCTCCCAAGGATTGACCA+GGG + Chr5:62031828-62031847 None:intergenic 50.0%
AACTTCCCTGCAGCTGAAAG+AGG - Chr5:62031030-62031049 MsG0580027493.01.T01:CDS 50.0%
ACAGTGGAGGAGGAAGTTGA+CGG + Chr5:62031860-62031879 None:intergenic 50.0%
AGGTGTAGACTTTGCCTGGA+AGG + Chr5:62030873-62030892 None:intergenic 50.0%
ATGCAAGGAGTCAGGCAAGA+AGG - Chr5:62032004-62032023 MsG0580027493.01.T01:CDS 50.0%
CAGTTTGGCAAAGACCTCGT+CGG + Chr5:62030653-62030672 None:intergenic 50.0%
CCAACAGTAGAGACGATGCA+TGG + Chr5:62030610-62030629 None:intergenic 50.0%
CCATGCATCGTCTCTACTGT+TGG - Chr5:62030607-62030626 MsG0580027493.01.T01:CDS 50.0%
CGATGCATGGAATGGATGGA+CGG + Chr5:62030597-62030616 None:intergenic 50.0%
CGCAGAGTCGAGTGATACTT+TGG - Chr5:62032246-62032265 MsG0580027493.01.T01:CDS 50.0%
CTTGGCTCATTGGACCTATG+AGG + Chr5:62032595-62032614 None:intergenic 50.0%
CTTGGTCTGTTACGGGAGTT+AGG + Chr5:62030678-62030697 None:intergenic 50.0%
GAGACGATGCATGGAATGGA+TGG + Chr5:62030601-62030620 None:intergenic 50.0%
GAGGGCAAAGCTTCGTTTGA+TGG - Chr5:62031215-62031234 MsG0580027493.01.T01:CDS 50.0%
GGAGGTTCTTGGTCTGTTAC+GGG + Chr5:62030685-62030704 None:intergenic 50.0%
GGGTAAACTTCAACCTCCCA+AGG + Chr5:62031839-62031858 None:intergenic 50.0%
GGTGATTGTGGCAGCATTAG+GGG + Chr5:62030560-62030579 None:intergenic 50.0%
GTGTGGAGTTGTTGCCTCAT+AGG - Chr5:62032578-62032597 MsG0580027493.01.T01:CDS 50.0%
TACGGGAGTTAGGAGCAGTT+TGG + Chr5:62030668-62030687 None:intergenic 50.0%
TCTCACCTCTTTCAGCTGCA+GGG + Chr5:62031038-62031057 None:intergenic 50.0%
TGTGGAGATGTTGACAGTGG+AGG + Chr5:62031873-62031892 None:intergenic 50.0%
TTCTCACCTCTTTCAGCTGC+AGG + Chr5:62031039-62031058 None:intergenic 50.0%
! GACTTGTTTGCAGAGTCGAG+TGG - Chr5:62032100-62032119 MsG0580027493.01.T01:CDS 50.0%
! TAAGAGGTTTTCAGCGGGAG+GGG - Chr5:62031262-62031281 MsG0580027493.01.T01:CDS 50.0%
!! AAGGTGCTGACTTGTTCGCA+GGG - Chr5:62032023-62032042 MsG0580027493.01.T01:CDS 50.0%
!! CAGTTCTAAAGGCCCTGACT+TGG - Chr5:62032222-62032241 MsG0580027493.01.T01:CDS 50.0%
!! CAGTTCTAAAGGCGCTGACT+TGG - Chr5:62032153-62032172 MsG0580027493.01.T01:CDS 50.0%
!! CAGTTCTAAAGGTGCGGACT+TGG - Chr5:62032291-62032310 MsG0580027493.01.T01:CDS 50.0%
!! GCTTGGCAGTTCTAAAGGTG+CGG - Chr5:62032285-62032304 MsG0580027493.01.T01:CDS 50.0%
!! GCTTGGCAGTTCTAAAGGTG+TGG - Chr5:62032285-62032304 MsG0580027493.01.T01:CDS 50.0%
!! TCACTTGGTGCTTGGCTCAT+TGG + Chr5:62032605-62032624 None:intergenic 50.0%
ACCTCCCAAGGATTGACCAG+GGG + Chr5:62031827-62031846 None:intergenic 55.0%
CAACCTCCCAAGGATTGACC+AGG + Chr5:62031829-62031848 None:intergenic 55.0%
CAGTGGAGGAGGAAGTTGAC+GGG + Chr5:62031859-62031878 None:intergenic 55.0%
CATCTGGCATGCAAGGAGTC+AGG - Chr5:62031996-62032015 MsG0580027493.01.T01:CDS 55.0%
CTGACTCCTTGCATGCCAGA+TGG + Chr5:62031998-62032017 None:intergenic 55.0%
GCGGATACAGGGCTAAAGCT+TGG - Chr5:62032268-62032287 MsG0580027493.01.T01:CDS 55.0%
GGAGATGTTGACAGTGGAGG+AGG + Chr5:62031870-62031889 None:intergenic 55.0%
GTCTCTGTCACTGACCTTCC+AGG - Chr5:62030856-62030875 MsG0580027493.01.T01:CDS 55.0%
TCTTCTTGGCCGTGAACCAC+AGG + Chr5:62030712-62030731 None:intergenic 55.0%
TGTTGATCCTCACACCGACG+AGG - Chr5:62030636-62030655 MsG0580027493.01.T01:CDS 55.0%
! GGTCTTGGGTGCAGTGGATT+TGG - Chr5:62031074-62031093 MsG0580027493.01.T01:CDS 55.0%
! GGTGGTTTCTGCGGGGTATT+AGG + Chr5:62031805-62031824 None:intergenic 55.0%
!! GAAGGTGCTGACTTGTTCGC+AGG - Chr5:62032022-62032041 MsG0580027493.01.T01:CDS 55.0%
ACCACCCCCTGGTCAATCCT+TGG - Chr5:62031819-62031838 MsG0580027493.01.T01:CDS 60.0%
CACGGCCAAGAAGACGACGA+TGG - Chr5:62030718-62030737 MsG0580027493.01.T01:CDS 60.0%
CCAAGAACCTCCTCCTCCTG+TGG - Chr5:62030693-62030712 MsG0580027493.01.T01:CDS 60.0%
CCACAGGAGGAGGAGGTTCT+TGG + Chr5:62030696-62030715 None:intergenic 60.0%
CCACCCCCTGGTCAATCCTT+GGG - Chr5:62031820-62031839 MsG0580027493.01.T01:CDS 60.0%
CCTCCCAAGGATTGACCAGG+GGG + Chr5:62031826-62031845 None:intergenic 60.0%
CCTCCTCCTCCTGTGGTTCA+CGG - Chr5:62030700-62030719 MsG0580027493.01.T01:CDS 60.0%
GCAAAGACCTCGTCGGTGTG+AGG + Chr5:62030646-62030665 None:intergenic 60.0%
TCGACTCTGCGCCCAAGTCA+GGG + Chr5:62032168-62032187 None:intergenic 60.0%
TCTTGGCCGTGAACCACAGG+AGG + Chr5:62030709-62030728 None:intergenic 60.0%
TGACCAGGGGGTGGTTTCTG+CGG + Chr5:62031814-62031833 None:intergenic 60.0%
! GACTTGTTCGCAGGGTCGAG+TGG - Chr5:62032031-62032050 MsG0580027493.01.T01:CDS 60.0%
ACCAGGGGGTGGTTTCTGCG+GGG + Chr5:62031812-62031831 None:intergenic 65.0%
CCCAAGGATTGACCAGGGGG+TGG + Chr5:62031823-62031842 None:intergenic 65.0%
CCCCCTGGTCAATCCTTGGG+AGG - Chr5:62031823-62031842 MsG0580027493.01.T01:CDS 65.0%
CCGTGAACCACAGGAGGAGG+AGG + Chr5:62030703-62030722 None:intergenic 65.0%
CTCGACTCTGCGCCCAAGTC+AGG + Chr5:62032238-62032257 None:intergenic 65.0%
GACCAGGGGGTGGTTTCTGC+GGG + Chr5:62031813-62031832 None:intergenic 65.0%
GAGTGCGGTCTTGGGTGCAG+TGG - Chr5:62031068-62031087 MsG0580027493.01.T01:CDS 65.0%
TGGCCGTGAACCACAGGAGG+AGG + Chr5:62030706-62030725 None:intergenic 65.0%
ACCCCGCAGAAACCACCCCC+TGG - Chr5:62031808-62031827 MsG0580027493.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr5 gene 62030448 62032624 62030448 ID=MsG0580027493.01;Name=MsG0580027493.01
Chr5 mRNA 62030448 62032624 62030448 ID=MsG0580027493.01.T01;Parent=MsG0580027493.01;Name=MsG0580027493.01.T01;_AED=0.53;_eAED=0.53;_QI=0|0|0|1|1|1|2|0|592
Chr5 exon 62031684 62032624 62031684 ID=MsG0580027493.01.T01:exon:13643;Parent=MsG0580027493.01.T01
Chr5 exon 62030448 62031285 62030448 ID=MsG0580027493.01.T01:exon:13642;Parent=MsG0580027493.01.T01
Chr5 CDS 62031684 62032624 62031684 ID=MsG0580027493.01.T01:cds;Parent=MsG0580027493.01.T01
Chr5 CDS 62030448 62031285 62030448 ID=MsG0580027493.01.T01:cds;Parent=MsG0580027493.01.T01
Gene Sequence

>MsG0580027493.01.T01

ATGGACTCCAAACTATGGCAGAAATGCGCTGGTCCCGACGTCAAGATTCCAAAGATTCACTCTAAAGTTTACTACTTCCCACAAGGTCATTTGGAACATGCATGTTCTTCCCCTAATGCTGCCACAATCACCATTCTTGATGGTTACCGTCCATCCATTCCATGCATCGTCTCTACTGTTGGTCTCTTTGTTGATCCTCACACCGACGAGGTCTTTGCCAAACTGCTCCTAACTCCCGTAACAGACCAAGAACCTCCTCCTCCTGTGGTTCACGGCCAAGAAGACGACGATGGAAACAATCTTGTTTCCTATGTCAAGACTCTCACACAATCTGATACTAAATCTGGATTCAATATGCCTCGTCAATGCACAGACTTGATCTTTCCAGAGTTGCAGAAGTCTCAAGAAGTCTCTGTCACTGACCTTCCAGGCAAAGTCTACACCTATACCTACTCAAAACAGAGTAGACTAACTAAAGGATGGTTTAATTTTGTAAGTGAGAAGAAACTCGTCCCCAAAGATTCCGTTGTTTTCATCAAAAACTCTGCCGGAAAAATATATGTCGGAATTCGCAGGAACACTAACTTCCCTGCAGCTGAAAGAGGTGAGAAATTAACTGAGAGTGCGGTCTTGGGTGCAGTGGATTTGGCTAACAAGAACGTGGCGTTTGAAGTTGTGTTTTATCCCACAGATGGGAATTGGTGTAATTTTGTAGTGGATGCCAAGGTTGTAGATGATGCCATGAAGATTGGTTGGAAATCTGGAATGAGGGCAAAGCTTCGTTTGATGGAACCTGAATCTTCAAATTTAACTATAAGAGGTTTTCAGCGGGAGGGGACAATCTCTAATGATTCTTCTAATGTCCCTAATTGGCACATGCTTAAGGTACTTATGCTTTCTTATTTTGTTCTAATGGTATTTCAATTGCATATTGTTATCAAGTTAAATGGGATGAACCTAATACCCCGCAGAAACCACCCCCTGGTCAATCCTTGGGAGGTTGAAGTTTACCCGTCAACTTCCTCCTCCACTGTCAACATCTCCACAACAAAAAGTCCTAAACTATCTCAGAGTTCTTCTCCCCGACAAATTCAAAATTCTTTAATGCCAAGTACACTGACACCATTACCGCCTCCACTGTTTATTTTTCCATCTGGCATGCAAGGAGTCAGGCAAGAAGGTGCTGACTTGTTCGCAGGGTCGAGTGGTACTTTGCTTGATACAGGGCTAAAGCTTGGCAGTTCTAAAGATGCTGACTTGTTTGCAGAGTCGAGTGGTACTTTGCCTGATACAAGGCTAAAGCTTGGCAGTTCTAAAGGCGCTGACTTGGGCGCAGAGTCGACTGATAATTTGGCTGATACAGAGCTAAAGCTTGGCAGTTCTAAAGGCCCTGACTTGGGCGCAGAGTCGAGTGATACTTTGGCGGATACAGGGCTAAAGCTTGGCAGTTCTAAAGGTGCGGACTTGGGCGCAGAGTCGAGTGATACTTTGGCTGATACAAGGCTAAAGCTTGGCAGTTCTAAAGGTGCATACTTGGGCGCAGAGTCGAGTGATACTTTGGCTGATACAAGGCTAAAGCTTGGCAGTTCTAAAGGTGCGGACTTGGGCACAGATTCGAGTGATACTTTGGCTGATACAGGGATAAAGCTTGGCAGTTCTAAAGGTGCGGACTTGGGCACAGAGTCGAGTGATACTTTGGCTGATACAGTGCTAAAGCTTGGCAGTTCTAAAGGTGTGGAGTTGTTGCCTCATAGGTCCAATGAGCCAAGCACCAAGTGA
Protein sequence

>MsG0580027493.01.T01

MDSKLWQKCAGPDVKIPKIHSKVYYFPQGHLEHACSSPNAATITILDGYRPSIPCIVSTVGLFVDPHTDEVFAKLLLTPVTDQEPPPPVVHGQEDDDGNNLVSYVKTLTQSDTKSGFNMPRQCTDLIFPELQKSQEVSVTDLPGKVYTYTYSKQSRLTKGWFNFVSEKKLVPKDSVVFIKNSAGKIYVGIRRNTNFPAAERGEKLTESAVLGAVDLANKNVAFEVVFYPTDGNWCNFVVDAKVVDDAMKIGWKSGMRAKLRLMEPESSNLTIRGFQREGTISNDSSNVPNWHMLKVLMLSYFVLMVFQLHIVIKLNGMNLIPRRNHPLVNPWEVEVYPSTSSSTVNISTTKSPKLSQSSSPRQIQNSLMPSTLTPLPPPLFIFPSGMQGVRQEGADLFAGSSGTLLDTGLKLGSSKDADLFAESSGTLPDTRLKLGSSKGADLGAESTDNLADTELKLGSSKGPDLGAESSDTLADTGLKLGSSKGADLGAESSDTLADTRLKLGSSKGAYLGAESSDTLADTRLKLGSSKGADLGTDSSDTLADTGIKLGSSKGADLGTESSDTLADTVLKLGSSKGVELLPHRSNEPSTK*