Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027729.01.T01 | XP_003605525.1 | 75.217 | 230 | 57 | 0 | 1 | 230 | 1 | 230 | 3.73E-125 | 364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027729.01.T01 | Q9FJK3 | 52.903 | 155 | 72 | 1 | 1 | 155 | 1 | 154 | 2.35E-45 | 156 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027729.01.T01 | G7JN85 | 75.217 | 230 | 57 | 0 | 1 | 230 | 1 | 230 | 1.78e-125 | 364 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0580027729.01.T01 | TF | MADS-M-type |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027729.01.T01 | MTR_4g032620 | 75.217 | 230 | 57 | 0 | 1 | 230 | 1 | 230 | 4.51e-129 | 364 |
| MsG0580027729.01.T01 | MTR_8g036130 | 61.382 | 246 | 79 | 3 | 1 | 230 | 1 | 246 | 7.83e-96 | 280 |
| MsG0580027729.01.T01 | MTR_4g031910 | 52.743 | 237 | 96 | 2 | 1 | 230 | 1 | 228 | 1.47e-74 | 226 |
| MsG0580027729.01.T01 | MTR_4g032290 | 53.498 | 243 | 87 | 5 | 1 | 230 | 1 | 230 | 7.23e-71 | 216 |
| MsG0580027729.01.T01 | MTR_3g065100 | 50.417 | 240 | 105 | 5 | 1 | 228 | 1 | 238 | 1.25e-64 | 201 |
| MsG0580027729.01.T01 | MTR_3g466980 | 44.068 | 236 | 108 | 7 | 1 | 227 | 1 | 221 | 2.86e-57 | 181 |
| MsG0580027729.01.T01 | MTR_4g032260 | 63.057 | 157 | 58 | 0 | 1 | 157 | 1 | 157 | 3.74e-57 | 179 |
| MsG0580027729.01.T01 | MTR_2g035610 | 70.248 | 121 | 36 | 0 | 1 | 121 | 1 | 121 | 5.51e-50 | 159 |
| MsG0580027729.01.T01 | MTR_3g466830 | 44.785 | 163 | 82 | 3 | 3 | 160 | 2 | 161 | 6.22e-44 | 145 |
| MsG0580027729.01.T01 | MTR_5g047580 | 44.231 | 156 | 85 | 2 | 1 | 156 | 1 | 154 | 1.28e-42 | 142 |
| MsG0580027729.01.T01 | MTR_4g063790 | 40.909 | 154 | 91 | 0 | 1 | 154 | 1 | 154 | 5.59e-38 | 130 |
| MsG0580027729.01.T01 | MTR_3g466890 | 42.105 | 152 | 87 | 1 | 3 | 154 | 2 | 152 | 3.08e-37 | 128 |
| MsG0580027729.01.T01 | MTR_7g011950 | 43.590 | 156 | 86 | 2 | 1 | 156 | 1 | 154 | 4.20e-37 | 127 |
| MsG0580027729.01.T01 | MTR_1g090783 | 41.558 | 154 | 88 | 2 | 3 | 156 | 2 | 153 | 4.00e-36 | 125 |
| MsG0580027729.01.T01 | MTR_1g090697 | 38.462 | 156 | 94 | 2 | 1 | 156 | 1 | 154 | 1.44e-35 | 124 |
| MsG0580027729.01.T01 | MTR_4g028800 | 81.944 | 72 | 11 | 1 | 1 | 72 | 1 | 70 | 2.40e-35 | 120 |
| MsG0580027729.01.T01 | MTR_3g031100 | 37.576 | 165 | 103 | 0 | 1 | 165 | 1 | 165 | 1.07e-34 | 124 |
| MsG0580027729.01.T01 | MTR_3g467080 | 36.538 | 156 | 99 | 0 | 1 | 156 | 1 | 156 | 1.11e-34 | 121 |
| MsG0580027729.01.T01 | MTR_1g077390 | 38.462 | 156 | 94 | 2 | 1 | 156 | 1 | 154 | 2.67e-34 | 120 |
| MsG0580027729.01.T01 | MTR_4g028720 | 41.667 | 156 | 89 | 2 | 1 | 156 | 1 | 154 | 3.47e-34 | 120 |
| MsG0580027729.01.T01 | MTR_1g084950 | 42.308 | 156 | 88 | 2 | 1 | 156 | 1 | 154 | 8.57e-34 | 119 |
| MsG0580027729.01.T01 | MTR_1g090710 | 35.484 | 155 | 99 | 1 | 1 | 155 | 1 | 154 | 1.26e-33 | 119 |
| MsG0580027729.01.T01 | MTR_5g075380 | 38.312 | 154 | 94 | 1 | 1 | 154 | 1 | 153 | 8.81e-32 | 114 |
| MsG0580027729.01.T01 | MTR_2g016210 | 37.580 | 157 | 98 | 0 | 1 | 157 | 1 | 157 | 1.50e-31 | 116 |
| MsG0580027729.01.T01 | MTR_7g055800 | 52.101 | 119 | 29 | 2 | 1 | 119 | 1 | 91 | 6.77e-31 | 109 |
| MsG0580027729.01.T01 | MTR_3g031240 | 32.051 | 156 | 106 | 0 | 1 | 156 | 1 | 156 | 1.11e-30 | 112 |
| MsG0580027729.01.T01 | MTR_1g077320 | 37.821 | 156 | 95 | 2 | 1 | 156 | 1 | 154 | 4.99e-30 | 109 |
| MsG0580027729.01.T01 | MTR_1g077300 | 39.744 | 156 | 90 | 2 | 1 | 156 | 1 | 152 | 2.35e-27 | 102 |
| MsG0580027729.01.T01 | MTR_7g055790 | 53.153 | 111 | 34 | 1 | 1 | 111 | 59 | 151 | 1.78e-26 | 100 |
| MsG0580027729.01.T01 | MTR_7g055940 | 51.429 | 105 | 23 | 2 | 1 | 105 | 1 | 77 | 4.34e-26 | 97.1 |
| MsG0580027729.01.T01 | MTR_2g035580 | 35.256 | 156 | 100 | 1 | 1 | 156 | 1 | 155 | 9.17e-26 | 98.6 |
| MsG0580027729.01.T01 | MTR_5g047560 | 41.270 | 126 | 57 | 2 | 1 | 126 | 1 | 109 | 9.75e-26 | 98.2 |
| MsG0580027729.01.T01 | MTR_3g466930 | 35.772 | 123 | 78 | 1 | 32 | 154 | 2 | 123 | 3.73e-25 | 96.3 |
| MsG0580027729.01.T01 | MTR_3g466900 | 36.585 | 123 | 77 | 1 | 32 | 154 | 2 | 123 | 6.16e-25 | 95.9 |
| MsG0580027729.01.T01 | MTR_3g465410 | 35.714 | 126 | 81 | 0 | 29 | 154 | 1 | 126 | 2.94e-24 | 94.4 |
| MsG0580027729.01.T01 | MTR_4g019670 | 34.337 | 166 | 92 | 4 | 1 | 155 | 1 | 160 | 5.51e-19 | 85.5 |
| MsG0580027729.01.T01 | MTR_7g106510 | 33.735 | 166 | 93 | 4 | 1 | 155 | 1 | 160 | 5.52e-19 | 85.5 |
| MsG0580027729.01.T01 | MTR_3g093900 | 29.870 | 154 | 105 | 2 | 3 | 155 | 6 | 157 | 3.81e-18 | 83.2 |
| MsG0580027729.01.T01 | MTR_4g032270 | 41.667 | 96 | 55 | 1 | 135 | 230 | 36 | 130 | 3.28e-16 | 72.8 |
| MsG0580027729.01.T01 | MTR_2g035590 | 46.237 | 93 | 49 | 1 | 74 | 166 | 1 | 92 | 1.55e-14 | 67.4 |
| MsG0580027729.01.T01 | MTR_6g018920 | 26.106 | 226 | 135 | 10 | 1 | 211 | 1 | 209 | 8.24e-13 | 67.0 |
| MsG0580027729.01.T01 | MTR_1g114730 | 33.333 | 102 | 57 | 4 | 1 | 94 | 1 | 99 | 5.67e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027729.01.T01 | AT5G48670 | 52.903 | 155 | 72 | 1 | 1 | 155 | 1 | 154 | 2.40e-46 | 156 |
| MsG0580027729.01.T01 | AT1G65300 | 41.243 | 177 | 97 | 2 | 3 | 173 | 2 | 177 | 7.28e-39 | 136 |
| MsG0580027729.01.T01 | AT5G26630 | 40.284 | 211 | 124 | 2 | 1 | 210 | 1 | 210 | 1.28e-37 | 131 |
| MsG0580027729.01.T01 | AT1G65330 | 39.247 | 186 | 108 | 2 | 3 | 184 | 2 | 186 | 2.86e-36 | 129 |
| MsG0580027729.01.T01 | AT3G05860 | 42.000 | 150 | 86 | 1 | 1 | 150 | 1 | 149 | 6.30e-36 | 126 |
| MsG0580027729.01.T01 | AT5G27960 | 42.484 | 153 | 87 | 1 | 4 | 156 | 2 | 153 | 7.24e-36 | 129 |
| MsG0580027729.01.T01 | AT5G26650 | 43.137 | 153 | 86 | 1 | 4 | 156 | 2 | 153 | 8.09e-36 | 130 |
| MsG0580027729.01.T01 | AT3G05860 | 39.752 | 161 | 96 | 1 | 1 | 161 | 1 | 160 | 3.57e-35 | 125 |
| MsG0580027729.01.T01 | AT3G05860 | 42.000 | 150 | 86 | 1 | 1 | 150 | 1 | 149 | 4.06e-35 | 125 |
| MsG0580027729.01.T01 | AT5G27810 | 50.538 | 93 | 46 | 0 | 29 | 121 | 1 | 93 | 5.87e-30 | 108 |
| MsG0580027729.01.T01 | AT1G31630 | 34.857 | 175 | 102 | 4 | 3 | 173 | 2 | 168 | 2.82e-29 | 112 |
| MsG0580027729.01.T01 | AT5G26580 | 38.710 | 155 | 80 | 2 | 1 | 155 | 1 | 140 | 3.78e-28 | 109 |
| MsG0580027729.01.T01 | AT1G31640 | 33.333 | 180 | 111 | 4 | 3 | 175 | 2 | 179 | 8.87e-27 | 107 |
| MsG0580027729.01.T01 | AT2G28700 | 30.052 | 193 | 125 | 3 | 1 | 186 | 1 | 190 | 3.61e-24 | 98.6 |
| MsG0580027729.01.T01 | AT5G06500 | 38.129 | 139 | 71 | 4 | 1 | 135 | 1 | 128 | 4.24e-21 | 88.6 |
| MsG0580027729.01.T01 | AT1G22590 | 36.190 | 105 | 67 | 0 | 1 | 105 | 1 | 105 | 9.28e-21 | 85.9 |
| MsG0580027729.01.T01 | AT2G40210 | 41.176 | 119 | 70 | 0 | 1 | 119 | 1 | 119 | 3.71e-19 | 85.5 |
| MsG0580027729.01.T01 | AT5G55690 | 39.216 | 102 | 49 | 3 | 1 | 95 | 1 | 96 | 4.16e-13 | 67.4 |
| MsG0580027729.01.T01 | AT5G55690 | 39.216 | 102 | 49 | 3 | 1 | 95 | 1 | 96 | 4.16e-13 | 67.4 |
| MsG0580027729.01.T01 | AT5G58890 | 42.857 | 98 | 46 | 4 | 1 | 90 | 1 | 96 | 1.74e-12 | 65.9 |
Find 51 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAACAATGACTCGGAAAA+AGG | 0.208892 | 5:-67534400 | None:intergenic |
| TTGTGTCTTCAGTTTCTCTT+TGG | 0.304045 | 5:+67534104 | None:intergenic |
| GAAGCTTGTGCCATTGTCTA+TGG | 0.334796 | 5:-67534270 | MsG0580027729.01.T01:CDS |
| ATTCATTCAAAGAAGTAGAT+TGG | 0.368355 | 5:+67533714 | None:intergenic |
| ATCTCCAGTTGAGGCTCATA+TGG | 0.393582 | 5:+67534246 | None:intergenic |
| GTGGGAGAAGAGCCAGAAAA+TGG | 0.406526 | 5:-67534166 | MsG0580027729.01.T01:CDS |
| TTCATTCAAAGAAGTAGATT+GGG | 0.410094 | 5:+67533715 | None:intergenic |
| GGTGCCATTTGGAATTGAAT+TGG | 0.421214 | 5:+67533904 | None:intergenic |
| ATGAGCCTCAACTGGAGATC+TGG | 0.421304 | 5:-67534242 | MsG0580027729.01.T01:CDS |
| TTTGTATCATATAAGTCTCT+TGG | 0.443115 | 5:+67534139 | None:intergenic |
| GAAGGACATTAGTAGAAGGT+TGG | 0.444167 | 5:-67533953 | MsG0580027729.01.T01:CDS |
| TGGACCATATGAGCCTCAAC+TGG | 0.450896 | 5:-67534250 | MsG0580027729.01.T01:CDS |
| AATTGAAGGACATTAGTAGA+AGG | 0.455635 | 5:-67533957 | MsG0580027729.01.T01:CDS |
| TTGATTCAAAACATCTTTGT+TGG | 0.470119 | 5:-67533993 | MsG0580027729.01.T01:CDS |
| ATGTCAATGGTGGTGCCATT+TGG | 0.473417 | 5:+67533893 | None:intergenic |
| GGAGATCTGGCCATCACCAC+GGG | 0.478240 | 5:-67534229 | MsG0580027729.01.T01:CDS |
| ATTAGTAGAAGGTTGGAAGC+AGG | 0.491391 | 5:-67533946 | MsG0580027729.01.T01:CDS |
| GCAGAAGGGTCTATTGAAGA+AGG | 0.498190 | 5:-67534322 | MsG0580027729.01.T01:CDS |
| GGATTGATGATGAATGATAA+AGG | 0.511410 | 5:-67533781 | MsG0580027729.01.T01:CDS |
| ACATCCAATTCAATTCCAAA+TGG | 0.514429 | 5:-67533908 | MsG0580027729.01.T01:CDS |
| TAGGAACAATGGTGACATCA+TGG | 0.530450 | 5:-67533821 | MsG0580027729.01.T01:CDS |
| TGATTGGTCATGGCTATGTT+GGG | 0.530714 | 5:-67533849 | MsG0580027729.01.T01:CDS |
| ATGTTTCAATGTCTTTGTGA+AGG | 0.533884 | 5:-67534045 | MsG0580027729.01.T01:CDS |
| CTAGGATCGACCTCGCCAAA+GGG | 0.537658 | 5:+67533745 | None:intergenic |
| AGTGCAGAATAATATCTCCT+TGG | 0.537754 | 5:-67534016 | MsG0580027729.01.T01:CDS |
| ATGATTGGTCATGGCTATGT+TGG | 0.538765 | 5:-67533850 | MsG0580027729.01.T01:CDS |
| ATGGCTATGTTGGGATGACT+AGG | 0.544058 | 5:-67533840 | MsG0580027729.01.T01:CDS |
| AATTCAGAACAATGTCTAAG+TGG | 0.549030 | 5:-67534185 | MsG0580027729.01.T01:CDS |
| GTATGGACTCCCCGTGGTGA+TGG | 0.556504 | 5:+67534219 | None:intergenic |
| TCTAGGATCGACCTCGCCAA+AGG | 0.563277 | 5:+67533744 | None:intergenic |
| AACCTACAATAAAAGGCAGA+AGG | 0.564320 | 5:-67534337 | MsG0580027729.01.T01:CDS |
| TAGTAGAAGGTTGGAAGCAG+GGG | 0.565783 | 5:-67533944 | MsG0580027729.01.T01:CDS |
| ATTCAGAACAATGTCTAAGT+GGG | 0.572255 | 5:-67534184 | MsG0580027729.01.T01:CDS |
| AGAGACTTATATGATACAAA+GGG | 0.576379 | 5:-67534136 | MsG0580027729.01.T01:CDS |
| TTAGTAGAAGGTTGGAAGCA+GGG | 0.576545 | 5:-67533945 | MsG0580027729.01.T01:CDS |
| GGAGACGAGACAGTACCCTT+TGG | 0.577776 | 5:-67533760 | MsG0580027729.01.T01:CDS |
| AAGAGACTTATATGATACAA+AGG | 0.581969 | 5:-67534137 | MsG0580027729.01.T01:CDS |
| GGCACCACCATTGACATCCA+AGG | 0.599236 | 5:-67533887 | MsG0580027729.01.T01:CDS |
| GATGGCCAGATCTCCAGTTG+AGG | 0.607571 | 5:+67534237 | None:intergenic |
| TCATCCTTGGATGTCAATGG+TGG | 0.611981 | 5:+67533883 | None:intergenic |
| TGGAGATCTGGCCATCACCA+CGG | 0.614340 | 5:-67534230 | MsG0580027729.01.T01:CDS |
| ACCTACAATAAAAGGCAGAA+GGG | 0.621576 | 5:-67534336 | MsG0580027729.01.T01:CDS |
| AAAATGGCAATGATTGGTCA+TGG | 0.627083 | 5:-67533859 | MsG0580027729.01.T01:CDS |
| TATGAACTAAGCACTCTATG+TGG | 0.633229 | 5:-67534297 | MsG0580027729.01.T01:CDS |
| CTCATATGGTCCATAGACAA+TGG | 0.638902 | 5:+67534260 | None:intergenic |
| TGACAACTATGAGAAAGAGA+TGG | 0.664057 | 5:-67534076 | MsG0580027729.01.T01:CDS |
| AAGAGAAACTGAAGACACAA+AGG | 0.673063 | 5:-67534101 | MsG0580027729.01.T01:CDS |
| CGAGACAGTACCCTTTGGCG+AGG | 0.701727 | 5:-67533755 | MsG0580027729.01.T01:CDS |
| GTTGGGATGACTAGGAACAA+TGG | 0.708539 | 5:-67533832 | MsG0580027729.01.T01:CDS |
| GAGATCTGGCCATCACCACG+GGG | 0.761872 | 5:-67534228 | MsG0580027729.01.T01:CDS |
| AGCACTGTATGGACTCCCCG+TGG | 0.777500 | 5:+67534213 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAGAGACTTATATGATACAA+AGG | - | Chr5:67533976-67533995 | MsG0580027729.01.T01:CDS | 25.0% |
| ! | AGAGACTTATATGATACAAA+GGG | - | Chr5:67533977-67533996 | MsG0580027729.01.T01:CDS | 25.0% |
| ! | GAAAAACAACCTACAATAAA+AGG | - | Chr5:67533769-67533788 | MsG0580027729.01.T01:CDS | 25.0% |
| ! | TTGATTCAAAACATCTTTGT+TGG | - | Chr5:67534120-67534139 | MsG0580027729.01.T01:CDS | 25.0% |
| ! | TTTGTATCATATAAGTCTCT+TGG | + | Chr5:67533977-67533996 | None:intergenic | 25.0% |
| !! | ATGGAAAGTCAAATTTTCAT+GGG | - | Chr5:67534311-67534330 | MsG0580027729.01.T01:CDS | 25.0% |
| !! | GTTGATTTACCAAAAATTGA+AGG | - | Chr5:67534142-67534161 | MsG0580027729.01.T01:CDS | 25.0% |
| !! | TACTAATGTCCTTCAATTTT+TGG | + | Chr5:67534154-67534173 | None:intergenic | 25.0% |
| AATTCAGAACAATGTCTAAG+TGG | - | Chr5:67533928-67533947 | MsG0580027729.01.T01:CDS | 30.0% | |
| AATTGAAGGACATTAGTAGA+AGG | - | Chr5:67534156-67534175 | MsG0580027729.01.T01:CDS | 30.0% | |
| ACATCCAATTCAATTCCAAA+TGG | - | Chr5:67534205-67534224 | MsG0580027729.01.T01:CDS | 30.0% | |
| ATGTTTCAATGTCTTTGTGA+AGG | - | Chr5:67534068-67534087 | MsG0580027729.01.T01:CDS | 30.0% | |
| ATTCAGAACAATGTCTAAGT+GGG | - | Chr5:67533929-67533948 | MsG0580027729.01.T01:CDS | 30.0% | |
| GATGAAAAAATGGCAATGAT+TGG | - | Chr5:67534248-67534267 | MsG0580027729.01.T01:CDS | 30.0% | |
| ! | CATGGAAAGTCAAATTTTCA+TGG | - | Chr5:67534310-67534329 | MsG0580027729.01.T01:CDS | 30.0% |
| !! | AAGATGTTTTGAATCAACCA+AGG | + | Chr5:67534117-67534136 | None:intergenic | 30.0% |
| !! | GGATTGATGATGAATGATAA+AGG | - | Chr5:67534332-67534351 | MsG0580027729.01.T01:CDS | 30.0% |
| AACCTACAATAAAAGGCAGA+AGG | - | Chr5:67533776-67533795 | MsG0580027729.01.T01:CDS | 35.0% | |
| AAGAGAAACTGAAGACACAA+AGG | - | Chr5:67534012-67534031 | MsG0580027729.01.T01:CDS | 35.0% | |
| ACCTACAATAAAAGGCAGAA+GGG | - | Chr5:67533777-67533796 | MsG0580027729.01.T01:CDS | 35.0% | |
| AGTAGATTGGGCAAAAATCT+AGG | + | Chr5:67534389-67534408 | None:intergenic | 35.0% | |
| AGTGCAGAATAATATCTCCT+TGG | - | Chr5:67534097-67534116 | MsG0580027729.01.T01:CDS | 35.0% | |
| GACATCCAAGGATGAAAAAA+TGG | - | Chr5:67534238-67534257 | MsG0580027729.01.T01:CDS | 35.0% | |
| TATGAACTAAGCACTCTATG+TGG | - | Chr5:67533816-67533835 | MsG0580027729.01.T01:CDS | 35.0% | |
| TGACAACTATGAGAAAGAGA+TGG | - | Chr5:67534037-67534056 | MsG0580027729.01.T01:CDS | 35.0% | |
| TTGTGTCTTCAGTTTCTCTT+TGG | + | Chr5:67534012-67534031 | None:intergenic | 35.0% | |
| ! | AAAATGGCAATGATTGGTCA+TGG | - | Chr5:67534254-67534273 | MsG0580027729.01.T01:CDS | 35.0% |
| ! | TTTTCATCCTTGGATGTCAA+TGG | + | Chr5:67534236-67534255 | None:intergenic | 35.0% |
| !!! | CATTGCCATTTTTTCATCCT+TGG | + | Chr5:67534246-67534265 | None:intergenic | 35.0% |
| !!! | TGAATTTTGAGAGCACTGTA+TGG | + | Chr5:67533914-67533933 | None:intergenic | 35.0% |
| ATTAGTAGAAGGTTGGAAGC+AGG | - | Chr5:67534167-67534186 | MsG0580027729.01.T01:CDS | 40.0% | |
| CTCATATGGTCCATAGACAA+TGG | + | Chr5:67533856-67533875 | None:intergenic | 40.0% | |
| GAAGGACATTAGTAGAAGGT+TGG | - | Chr5:67534160-67534179 | MsG0580027729.01.T01:CDS | 40.0% | |
| TAGGAACAATGGTGACATCA+TGG | - | Chr5:67534292-67534311 | MsG0580027729.01.T01:CDS | 40.0% | |
| TTAGTAGAAGGTTGGAAGCA+GGG | - | Chr5:67534168-67534187 | MsG0580027729.01.T01:CDS | 40.0% | |
| ! | ACCCTTCTGCCTTTTATTGT+AGG | + | Chr5:67533781-67533800 | None:intergenic | 40.0% |
| ! | ATGATTGGTCATGGCTATGT+TGG | - | Chr5:67534263-67534282 | MsG0580027729.01.T01:CDS | 40.0% |
| ! | TCTCTTGGTTCACCATTTTC+TGG | + | Chr5:67533962-67533981 | None:intergenic | 40.0% |
| ! | TGATTGGTCATGGCTATGTT+GGG | - | Chr5:67534264-67534283 | MsG0580027729.01.T01:CDS | 40.0% |
| !! | GGTGCCATTTGGAATTGAAT+TGG | + | Chr5:67534212-67534231 | None:intergenic | 40.0% |
| ATCTCCAGTTGAGGCTCATA+TGG | + | Chr5:67533870-67533889 | None:intergenic | 45.0% | |
| ATGGCTATGTTGGGATGACT+AGG | - | Chr5:67534273-67534292 | MsG0580027729.01.T01:CDS | 45.0% | |
| GCAGAAGGGTCTATTGAAGA+AGG | - | Chr5:67533791-67533810 | MsG0580027729.01.T01:CDS | 45.0% | |
| GTTGGGATGACTAGGAACAA+TGG | - | Chr5:67534281-67534300 | MsG0580027729.01.T01:CDS | 45.0% | |
| TAGTAGAAGGTTGGAAGCAG+GGG | - | Chr5:67534169-67534188 | MsG0580027729.01.T01:CDS | 45.0% | |
| TCATCCTTGGATGTCAATGG+TGG | + | Chr5:67534233-67534252 | None:intergenic | 45.0% | |
| ! | GAAGCTTGTGCCATTGTCTA+TGG | - | Chr5:67533843-67533862 | MsG0580027729.01.T01:CDS | 45.0% |
| !! | ATGTCAATGGTGGTGCCATT+TGG | + | Chr5:67534223-67534242 | None:intergenic | 45.0% |
| ATGAGCCTCAACTGGAGATC+TGG | - | Chr5:67533871-67533890 | MsG0580027729.01.T01:CDS | 50.0% | |
| GTGGGAGAAGAGCCAGAAAA+TGG | - | Chr5:67533947-67533966 | MsG0580027729.01.T01:CDS | 50.0% | |
| TGGACCATATGAGCCTCAAC+TGG | - | Chr5:67533863-67533882 | MsG0580027729.01.T01:CDS | 50.0% | |
| CTAGGATCGACCTCGCCAAA+GGG | + | Chr5:67534371-67534390 | None:intergenic | 55.0% | |
| GATGGCCAGATCTCCAGTTG+AGG | + | Chr5:67533879-67533898 | None:intergenic | 55.0% | |
| GGAGACGAGACAGTACCCTT+TGG | - | Chr5:67534353-67534372 | MsG0580027729.01.T01:CDS | 55.0% | |
| GGCACCACCATTGACATCCA+AGG | - | Chr5:67534226-67534245 | MsG0580027729.01.T01:CDS | 55.0% | |
| TGGAGATCTGGCCATCACCA+CGG | - | Chr5:67533883-67533902 | MsG0580027729.01.T01:CDS | 55.0% | |
| ! | TCTAGGATCGACCTCGCCAA+AGG | + | Chr5:67534372-67534391 | None:intergenic | 55.0% |
| AGCACTGTATGGACTCCCCG+TGG | + | Chr5:67533903-67533922 | None:intergenic | 60.0% | |
| CGAGACAGTACCCTTTGGCG+AGG | - | Chr5:67534358-67534377 | MsG0580027729.01.T01:CDS | 60.0% | |
| GAGATCTGGCCATCACCACG+GGG | - | Chr5:67533885-67533904 | MsG0580027729.01.T01:CDS | 60.0% | |
| GGAGATCTGGCCATCACCAC+GGG | - | Chr5:67533884-67533903 | MsG0580027729.01.T01:CDS | 60.0% | |
| GTATGGACTCCCCGTGGTGA+TGG | + | Chr5:67533897-67533916 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 67533720 | 67534415 | 67533720 | ID=MsG0580027729.01;Name=MsG0580027729.01 |
| Chr5 | mRNA | 67533720 | 67534415 | 67533720 | ID=MsG0580027729.01.T01;Parent=MsG0580027729.01;Name=MsG0580027729.01.T01;_AED=0.43;_eAED=0.43;_QI=0|-1|0|1|-1|1|1|0|231 |
| Chr5 | exon | 67533720 | 67534415 | 67533720 | ID=MsG0580027729.01.T01:exon:44189;Parent=MsG0580027729.01.T01 |
| Chr5 | CDS | 67533720 | 67534415 | 67533720 | ID=MsG0580027729.01.T01:cds;Parent=MsG0580027729.01.T01 |
| Gene Sequence |
| Protein sequence |
