AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027775.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027775.01.T01 MTR_4g029540 94.595 296 15 1 1 295 1 296 0.0 572
MsG0580027775.01.T01 MTR_8g006470 43.098 297 142 6 1 291 1 276 8.82e-59 190
MsG0580027775.01.T01 MTR_3g052450 42.748 131 65 1 6 126 36 166 2.51e-32 125
MsG0580027775.01.T01 MTR_1g021230 50.442 113 55 1 10 121 57 169 8.41e-32 122
MsG0580027775.01.T01 MTR_3g052430 48.113 106 55 0 10 115 41 146 2.04e-31 122
MsG0580027775.01.T01 MTR_8g042410 41.216 148 81 3 2 144 25 171 2.18e-30 120
MsG0580027775.01.T01 MTR_5g029840 46.218 119 56 2 10 120 12 130 5.65e-30 115
MsG0580027775.01.T01 MTR_5g007370 50.485 103 51 0 10 112 12 114 1.28e-29 114
MsG0580027775.01.T01 MTR_4g094982 54.455 101 45 1 12 112 5 104 2.21e-29 113
MsG0580027775.01.T01 MTR_3g011610 43.396 106 60 0 10 115 37 142 9.62e-29 115
MsG0580027775.01.T01 MTR_7g115650 46.729 107 57 0 6 112 8 114 1.72e-28 108
MsG0580027775.01.T01 MTR_1g085640 42.857 140 75 3 10 146 12 149 2.00e-28 112
MsG0580027775.01.T01 MTR_4g082230 41.304 138 76 3 6 140 8 143 2.68e-28 112
MsG0580027775.01.T01 MTR_8g017500 46.018 113 61 0 10 122 12 124 3.01e-28 111
MsG0580027775.01.T01 MTR_7g035075 33.929 168 97 3 10 169 14 175 3.01e-28 108
MsG0580027775.01.T01 MTR_5g016510 48.000 125 62 2 12 134 5 128 3.45e-28 110
MsG0580027775.01.T01 MTR_5g088080 31.274 259 162 9 11 264 13 260 6.12e-28 108
MsG0580027775.01.T01 MTR_5g088150 31.274 259 162 9 11 264 13 260 6.12e-28 108
MsG0580027775.01.T01 MTR_5g488210 31.274 259 162 9 11 264 13 260 6.12e-28 108
MsG0580027775.01.T01 MTR_1g062940 47.222 108 56 1 8 114 4 111 8.35e-28 107
MsG0580027775.01.T01 MTR_2g089620 42.975 121 66 2 6 123 8 128 1.06e-27 109
MsG0580027775.01.T01 MTR_8g017440 36.994 173 99 2 10 173 12 183 1.44e-27 109
MsG0580027775.01.T01 MTR_3g074520 45.631 103 56 0 10 112 12 114 1.84e-27 109
MsG0580027775.01.T01 MTR_1g043050 39.535 129 77 1 6 133 8 136 1.91e-27 107
MsG0580027775.01.T01 MTR_6g012690 44.660 103 57 0 10 112 12 114 2.04e-27 109
MsG0580027775.01.T01 MTR_6g006030 42.718 103 59 0 10 112 14 116 2.60e-27 105
MsG0580027775.01.T01 MTR_7g110830 49.057 106 54 0 10 115 12 117 2.80e-27 109
MsG0580027775.01.T01 MTR_0140s0030 43.925 107 60 0 6 112 9 115 2.98e-27 108
MsG0580027775.01.T01 MTR_0489s0020 43.925 107 60 0 6 112 9 115 2.98e-27 108
MsG0580027775.01.T01 MTR_5g488170 33.333 207 132 5 11 216 13 214 2.99e-27 106
MsG0580027775.01.T01 MTR_1g086530 44.340 106 59 0 10 115 33 138 3.55e-27 107
MsG0580027775.01.T01 MTR_4g082290 40.580 138 77 3 6 140 8 143 3.56e-27 109
MsG0580027775.01.T01 MTR_5g088640 37.500 168 99 5 11 177 13 175 5.38e-27 106
MsG0580027775.01.T01 MTR_7g096930 42.857 112 63 1 6 116 8 119 6.54e-27 106
MsG0580027775.01.T01 MTR_4g478180 44.660 103 57 0 10 112 13 115 6.58e-27 108
MsG0580027775.01.T01 MTR_2g011660 44.860 107 58 1 10 115 13 119 6.87e-27 107
MsG0580027775.01.T01 MTR_5g010020 47.475 99 52 0 10 108 12 110 7.30e-27 107
MsG0580027775.01.T01 MTR_7g010210 43.689 103 58 0 10 112 12 114 7.84e-27 106
MsG0580027775.01.T01 MTR_7g011170 44.860 107 59 0 6 112 8 114 1.06e-26 106
MsG0580027775.01.T01 MTR_7g010210 43.689 103 58 0 10 112 12 114 1.09e-26 107
MsG0580027775.01.T01 MTR_7g087130 37.594 133 83 0 6 138 8 140 1.30e-26 107
MsG0580027775.01.T01 MTR_8g017540 45.133 113 62 0 10 122 58 170 2.68e-26 107
MsG0580027775.01.T01 MTR_3g039990 42.342 111 63 1 6 115 9 119 2.68e-26 105
MsG0580027775.01.T01 MTR_4g105130 38.621 145 85 2 10 150 12 156 2.68e-26 106
MsG0580027775.01.T01 MTR_1g086510 41.121 107 62 1 3 109 15 120 3.31e-26 104
MsG0580027775.01.T01 MTR_2g096380 30.263 228 148 3 10 232 6 227 4.30e-26 103
MsG0580027775.01.T01 MTR_1g085040 40.000 155 87 3 10 160 12 164 4.43e-26 106
MsG0580027775.01.T01 MTR_2g099740 44.248 113 63 0 10 122 12 124 5.46e-26 106
MsG0580027775.01.T01 MTR_4g019370 47.525 101 52 1 12 112 38 137 5.59e-26 105
MsG0580027775.01.T01 MTR_2g088170 49.541 109 55 0 7 115 26 134 5.74e-26 107
MsG0580027775.01.T01 MTR_4g091490 43.925 107 59 1 10 115 13 119 7.36e-26 105
MsG0580027775.01.T01 MTR_8g017340 49.524 105 50 2 10 112 12 115 8.53e-26 106
MsG0580027775.01.T01 MTR_7g076740 35.802 162 98 3 10 165 12 173 9.08e-26 103
MsG0580027775.01.T01 MTR_8g098860 43.519 108 61 0 10 117 12 119 1.08e-25 104
MsG0580027775.01.T01 MTR_1g043080 42.056 107 62 0 6 112 8 114 1.14e-25 102
MsG0580027775.01.T01 MTR_8g017390 45.217 115 60 2 10 122 12 125 1.58e-25 105
MsG0580027775.01.T01 MTR_6g012180 43.434 99 56 0 10 108 12 110 1.75e-25 103
MsG0580027775.01.T01 MTR_5g062790 34.946 186 110 6 11 194 10 186 1.77e-25 103
MsG0580027775.01.T01 MTR_2g064160 45.631 103 56 0 10 112 11 113 1.78e-25 103
MsG0580027775.01.T01 MTR_1g110460 37.273 110 69 0 6 115 22 131 2.27e-25 103
MsG0580027775.01.T01 MTR_5g042030 42.857 119 65 2 10 125 7 125 5.82e-25 101
MsG0580027775.01.T01 MTR_1g073170 37.190 121 72 1 11 131 21 137 6.20e-25 100
MsG0580027775.01.T01 MTR_1g100653 40.909 110 65 0 6 115 8 117 7.46e-25 101
MsG0580027775.01.T01 MTR_2g067420 42.308 104 60 0 6 109 10 113 8.27e-25 102
MsG0580027775.01.T01 MTR_0251s0050 43.519 108 60 1 10 116 13 120 1.21e-24 100
MsG0580027775.01.T01 MTR_3g101290 48.515 101 51 1 12 112 37 136 1.57e-24 99.0
MsG0580027775.01.T01 MTR_8g017350 47.619 105 52 2 10 112 12 115 1.71e-24 103
MsG0580027775.01.T01 MTR_5g088610 45.283 106 57 1 11 115 10 115 1.77e-24 101
MsG0580027775.01.T01 MTR_2g097910 41.228 114 67 0 10 123 20 133 2.00e-24 100
MsG0580027775.01.T01 MTR_1g112760 44.660 103 57 0 10 112 13 115 2.32e-24 98.6
MsG0580027775.01.T01 MTR_0063s0090 40.833 120 69 1 5 122 7 126 2.38e-24 98.6
MsG0580027775.01.T01 MTR_4g063100 42.478 113 63 1 11 121 8 120 2.80e-24 99.0
MsG0580027775.01.T01 MTR_3g077110 45.631 103 56 0 10 112 12 114 3.11e-24 100
MsG0580027775.01.T01 MTR_1g100667 46.078 102 55 0 11 112 14 115 3.19e-24 99.4
MsG0580027775.01.T01 MTR_1g076150 42.056 107 62 0 6 112 8 114 4.08e-24 98.6
MsG0580027775.01.T01 MTR_8g031360 47.115 104 54 1 10 112 13 116 4.25e-24 99.4
MsG0580027775.01.T01 MTR_4g057635 34.715 193 97 6 10 192 12 185 5.00e-24 99.8
MsG0580027775.01.T01 MTR_5g079670 39.837 123 71 1 10 132 11 130 6.19e-24 97.1
MsG0580027775.01.T01 MTR_0008s0280 38.739 111 68 0 5 115 7 117 6.53e-24 97.4
MsG0580027775.01.T01 MTR_8g095390 40.164 122 71 1 6 127 8 127 9.34e-24 99.0
MsG0580027775.01.T01 MTR_7g102110 40.496 121 69 2 6 123 8 128 9.35e-24 98.2
MsG0580027775.01.T01 MTR_2g095520 44.231 104 57 1 6 108 8 111 9.97e-24 99.0
MsG0580027775.01.T01 MTR_1g045610 39.623 106 64 0 11 116 22 127 1.24e-23 97.4
MsG0580027775.01.T01 MTR_4g485530 43.689 103 57 1 12 113 14 116 1.76e-23 95.5
MsG0580027775.01.T01 MTR_7g111290 46.939 98 52 0 10 107 12 109 1.93e-23 99.0
MsG0580027775.01.T01 MTR_2g089450 34.899 149 96 1 10 157 12 160 2.06e-23 96.7
MsG0580027775.01.T01 MTR_2g034790 29.200 250 158 6 6 247 8 246 2.15e-23 98.2
MsG0580027775.01.T01 MTR_3g461490 42.056 107 62 0 6 112 8 114 2.24e-23 98.2
MsG0580027775.01.T01 MTR_4g065017 40.336 119 71 0 10 128 17 135 2.63e-23 97.8
MsG0580027775.01.T01 MTR_8g027345 41.667 108 62 1 10 116 12 119 3.63e-23 97.1
MsG0580027775.01.T01 MTR_0008s0390 39.535 129 73 2 10 137 13 137 4.56e-23 96.3
MsG0580027775.01.T01 MTR_4g073420 37.008 127 78 1 6 130 8 134 4.96e-23 96.3
MsG0580027775.01.T01 MTR_0008s0470 42.718 103 59 0 10 112 13 115 6.93e-23 95.9
MsG0580027775.01.T01 MTR_1g017000 37.405 131 70 2 10 128 12 142 7.14e-23 95.1
MsG0580027775.01.T01 MTR_4g121460 38.318 107 66 0 6 112 8 114 8.47e-23 96.7
MsG0580027775.01.T01 MTR_6g009430 38.060 134 80 2 6 136 8 141 1.08e-22 96.3
MsG0580027775.01.T01 MTR_1g083630 42.727 110 62 1 10 118 12 121 1.17e-22 98.2
MsG0580027775.01.T01 MTR_1g017140 41.667 108 62 1 6 112 8 115 2.01e-22 95.5
MsG0580027775.01.T01 MTR_1g026870 43.519 108 60 1 10 117 83 189 2.51e-22 97.4
MsG0580027775.01.T01 MTR_5g078140 39.062 128 72 1 10 137 12 133 2.59e-22 95.1
MsG0580027775.01.T01 MTR_6g090405 40.741 108 63 1 6 112 8 115 3.13e-22 93.6
MsG0580027775.01.T01 MTR_3g463400 46.535 101 53 1 12 112 133 232 3.73e-22 96.3
MsG0580027775.01.T01 MTR_3g028740 43.689 103 58 0 10 112 22 124 4.64e-22 94.7
MsG0580027775.01.T01 MTR_3g110028 42.593 108 61 1 10 117 83 189 4.81e-22 96.7
MsG0580027775.01.T01 MTR_3g065440 42.718 103 59 0 10 112 12 114 5.48e-22 94.0
MsG0580027775.01.T01 MTR_3g097450 30.526 190 121 3 6 188 8 193 6.08e-22 93.6
MsG0580027775.01.T01 MTR_6g055910 40.351 114 68 0 1 114 5 118 7.68e-22 93.2
MsG0580027775.01.T01 MTR_5g014990 41.667 108 62 1 6 112 8 115 1.53e-21 92.8
MsG0580027775.01.T01 MTR_5g049190 43.243 111 60 2 10 118 17 126 1.67e-21 91.3
MsG0580027775.01.T01 MTR_3g083540 37.607 117 70 1 10 123 41 157 1.88e-21 92.4
MsG0580027775.01.T01 MTR_7g117730 36.449 107 68 0 10 116 12 118 2.89e-21 90.9
MsG0580027775.01.T01 MTR_6g015455 49.505 101 50 1 12 112 5 104 2.94e-21 94.4
MsG0580027775.01.T01 MTR_4g100720 40.404 99 59 0 10 108 13 111 3.19e-21 89.0
MsG0580027775.01.T01 MTR_3g103570 39.815 108 64 1 6 112 8 115 4.60e-21 92.0
MsG0580027775.01.T01 MTR_7g061330 44.660 103 56 1 10 112 111 212 5.82e-21 93.2
MsG0580027775.01.T01 MTR_7g461410 44.660 103 56 1 10 112 111 212 5.82e-21 93.2
MsG0580027775.01.T01 MTR_2g089420 38.889 108 65 1 10 116 11 118 6.49e-21 92.4
MsG0580027775.01.T01 MTR_5g082910 45.631 103 55 1 6 108 13 114 6.66e-21 90.5
MsG0580027775.01.T01 MTR_7g061330 44.660 103 56 1 10 112 75 176 7.01e-21 92.8
MsG0580027775.01.T01 MTR_2g033170 39.623 106 64 0 10 115 24 129 1.25e-20 90.5
MsG0580027775.01.T01 MTR_4g097570 40.777 103 60 1 6 107 8 110 1.26e-20 89.7
MsG0580027775.01.T01 MTR_4g102380 38.843 121 71 1 10 127 12 132 1.27e-20 89.4
MsG0580027775.01.T01 MTR_6g074860 44.231 104 57 1 12 115 4 106 1.63e-20 88.6
MsG0580027775.01.T01 MTR_8g020490 40.404 99 59 0 10 108 8 106 1.65e-20 89.0
MsG0580027775.01.T01 MTR_5g070020 40.594 101 59 1 12 112 122 221 2.34e-20 90.1
MsG0580027775.01.T01 MTR_5g078950 41.414 99 58 0 10 108 7 105 2.67e-20 88.6
MsG0580027775.01.T01 MTR_8g060940 41.584 101 59 0 8 108 5 105 3.04e-20 87.8
MsG0580027775.01.T01 MTR_4g088015 40.777 103 60 1 10 112 219 320 3.06e-20 90.5
MsG0580027775.01.T01 MTR_7g451170 33.125 160 93 4 12 169 191 338 4.09e-20 90.1
MsG0580027775.01.T01 MTR_7g037130 28.272 191 112 5 1 189 134 301 5.20e-20 89.0
MsG0580027775.01.T01 MTR_5g078930 41.584 101 59 0 11 111 10 110 5.79e-20 86.7
MsG0580027775.01.T01 MTR_7g035350 31.016 187 118 5 15 200 228 404 6.10e-20 89.7
MsG0580027775.01.T01 MTR_4g125520 31.746 126 82 1 10 131 12 137 8.07e-20 87.8
MsG0580027775.01.T01 MTR_4g128670 40.385 104 61 1 6 108 8 111 8.09e-20 88.6
MsG0580027775.01.T01 MTR_7g037260 31.111 180 103 5 10 189 143 301 8.17e-20 88.6
MsG0580027775.01.T01 MTR_5g079290 39.474 114 67 2 1 113 9 121 1.10e-19 86.7
MsG0580027775.01.T01 MTR_4g123040 38.679 106 65 0 10 115 24 129 1.24e-19 87.4
MsG0580027775.01.T01 MTR_4g097570 40.385 104 60 2 6 107 8 111 1.43e-19 87.0
MsG0580027775.01.T01 MTR_4g105660 40.187 107 63 1 6 112 174 279 1.50e-19 88.6
MsG0580027775.01.T01 MTR_7g109320 42.991 107 61 0 6 112 8 114 1.55e-19 87.8
MsG0580027775.01.T01 MTR_5g041570 40.625 128 61 3 12 125 134 260 2.45e-19 87.8
MsG0580027775.01.T01 MTR_5g079220 40.351 114 66 2 1 113 13 125 3.06e-19 85.9
MsG0580027775.01.T01 MTR_4g082040 43.103 116 62 2 3 115 93 207 4.28e-19 87.0
MsG0580027775.01.T01 MTR_5g078910 38.835 103 63 0 10 112 7 109 9.40e-19 84.7
MsG0580027775.01.T01 MTR_0001s0360 39.000 100 61 0 10 109 7 106 1.12e-18 84.0
MsG0580027775.01.T01 MTR_1g085880 37.107 159 87 5 10 156 11 168 1.28e-18 82.4
MsG0580027775.01.T01 MTR_5g079120 38.532 109 66 1 4 112 56 163 1.41e-18 84.3
MsG0580027775.01.T01 MTR_3g077650 40.594 101 59 1 12 112 181 280 1.42e-18 85.9
MsG0580027775.01.T01 MTR_7g450950 32.215 149 88 3 12 156 157 296 1.74e-18 84.7
MsG0580027775.01.T01 MTR_7g017260 42.157 102 57 1 10 109 25 126 1.86e-18 83.6
MsG0580027775.01.T01 MTR_4g128190 35.443 158 83 5 10 163 11 153 2.84e-18 82.4
MsG0580027775.01.T01 MTR_1g085770 37.107 159 87 5 10 156 11 168 3.33e-18 83.6
MsG0580027775.01.T01 MTR_0193s0090 36.893 103 65 0 10 112 7 109 6.94e-18 80.5
MsG0580027775.01.T01 MTR_3g045430 38.095 105 65 0 8 112 11 115 9.20e-18 82.0
MsG0580027775.01.T01 MTR_5g078860 39.474 114 66 2 4 115 2 114 9.54e-18 82.0
MsG0580027775.01.T01 MTR_2g096380 29.897 194 125 4 44 232 21 208 1.10e-17 80.5
MsG0580027775.01.T01 MTR_0197s0010 31.544 149 83 1 14 143 5 153 1.15e-17 80.5
MsG0580027775.01.T01 MTR_0247s0040 39.394 99 60 0 10 108 7 105 1.19e-17 79.3
MsG0580027775.01.T01 MTR_5g078800 39.474 114 66 2 4 115 2 114 1.69e-17 80.9
MsG0580027775.01.T01 MTR_1g057980 32.692 156 98 4 10 162 78 229 2.16e-17 80.9
MsG0580027775.01.T01 MTR_5g007300 48.052 77 40 0 10 86 64 140 4.13e-17 76.6
MsG0580027775.01.T01 MTR_3g089045 45.192 104 56 1 12 115 16 118 5.30e-17 79.7
MsG0580027775.01.T01 MTR_7g086960 44.144 111 58 2 8 115 82 191 6.72e-17 80.1
MsG0580027775.01.T01 MTR_4g063100 45.000 80 42 1 44 121 12 91 8.57e-17 78.2
MsG0580027775.01.T01 MTR_6g027340 36.538 104 65 1 12 115 16 118 2.29e-16 76.3
MsG0580027775.01.T01 MTR_8g468380 35.294 102 65 1 15 116 25 125 2.31e-16 79.3
MsG0580027775.01.T01 MTR_6g027360 35.135 111 71 1 5 115 71 180 2.33e-16 78.2
MsG0580027775.01.T01 MTR_6g027370 38.462 104 63 1 12 115 99 201 5.57e-16 77.4
MsG0580027775.01.T01 MTR_5g010650 28.916 249 133 8 10 215 108 355 2.46e-15 76.3
MsG0580027775.01.T01 MTR_7g061550 36.893 103 63 1 15 115 10 112 7.36e-15 74.3
MsG0580027775.01.T01 MTR_5g038910 36.735 98 61 1 15 112 29 125 1.54e-14 73.9
MsG0580027775.01.T01 MTR_5g038910 37.234 94 58 1 15 108 29 121 1.98e-14 73.2
MsG0580027775.01.T01 MTR_6g055910 42.857 84 43 1 36 114 6 89 7.19e-14 70.5
MsG0580027775.01.T01 MTR_7g111290 48.438 64 33 0 44 107 4 67 8.05e-14 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027775.01.T01 AT3G60460 37.821 312 146 7 4 291 5 292 1.77e-52 174
MsG0580027775.01.T01 AT4G26930 47.967 123 62 2 10 131 19 140 1.55e-32 124
MsG0580027775.01.T01 AT5G06100 48.113 106 55 0 10 115 32 137 1.22e-31 122
MsG0580027775.01.T01 AT5G06100 48.113 106 55 0 10 115 32 137 3.28e-31 122
MsG0580027775.01.T01 AT5G06100 48.113 106 55 0 10 115 32 137 3.28e-31 122
MsG0580027775.01.T01 AT5G06100 48.113 106 55 0 10 115 32 137 3.28e-31 122
MsG0580027775.01.T01 AT5G06100 48.113 106 55 0 10 115 32 137 3.28e-31 122
MsG0580027775.01.T01 AT3G11440 45.455 110 60 0 6 115 37 146 7.03e-31 120
MsG0580027775.01.T01 AT3G11440 45.455 110 60 0 6 115 37 146 2.32e-30 120
MsG0580027775.01.T01 AT3G11440 45.455 110 60 0 6 115 37 146 2.32e-30 120
MsG0580027775.01.T01 AT3G11440 45.455 110 60 0 6 115 37 146 2.32e-30 120
MsG0580027775.01.T01 AT5G55020 46.226 106 57 0 10 115 26 131 8.36e-30 118
MsG0580027775.01.T01 AT2G32460 44.340 106 59 0 10 115 18 123 2.65e-29 116
MsG0580027775.01.T01 AT2G32460 44.954 109 59 1 7 115 4 111 2.74e-29 116
MsG0580027775.01.T01 AT3G27810 34.731 167 104 2 10 173 20 184 1.30e-28 109
MsG0580027775.01.T01 AT3G50060 55.446 101 44 1 12 112 6 105 1.69e-28 111
MsG0580027775.01.T01 AT3G01530 39.200 125 73 1 6 130 21 142 3.99e-28 108
MsG0580027775.01.T01 AT2G26960 46.154 104 56 0 12 115 22 125 5.14e-28 112
MsG0580027775.01.T01 AT1G34670 45.631 103 56 0 10 112 12 114 6.80e-28 111
MsG0580027775.01.T01 AT4G28110 42.975 121 66 2 6 123 8 128 1.06e-27 108
MsG0580027775.01.T01 AT5G65230 45.631 103 56 0 10 112 12 114 2.16e-27 108
MsG0580027775.01.T01 AT4G21440 44.628 121 64 2 6 123 8 128 2.36e-27 109
MsG0580027775.01.T01 AT5G67300 54.455 101 45 1 12 112 6 105 3.20e-27 108
MsG0580027775.01.T01 AT3G13890 48.544 103 53 0 10 112 12 114 3.32e-27 108
MsG0580027775.01.T01 AT3G55730 53.465 101 46 1 12 112 56 155 3.39e-27 109
MsG0580027775.01.T01 AT5G40350 41.748 103 60 0 10 112 17 119 4.91e-27 105
MsG0580027775.01.T01 AT5G15310 44.660 103 57 0 10 112 12 114 5.57e-27 106
MsG0580027775.01.T01 AT3G12720 44.262 122 68 0 10 131 22 143 5.61e-27 107
MsG0580027775.01.T01 AT1G63910 47.170 106 56 0 10 115 12 117 7.32e-27 108
MsG0580027775.01.T01 AT5G54230 44.660 103 57 0 10 112 12 114 7.66e-27 107
MsG0580027775.01.T01 AT2G47190 42.056 107 62 0 10 116 20 126 1.18e-26 105
MsG0580027775.01.T01 AT5G15310 44.660 103 57 0 10 112 12 114 1.41e-26 106
MsG0580027775.01.T01 AT1G74650 42.991 107 61 0 6 112 8 114 1.58e-26 106
MsG0580027775.01.T01 AT5G15310 44.660 103 57 0 10 112 12 114 1.64e-26 106
MsG0580027775.01.T01 AT4G01680 47.170 106 56 0 10 115 12 117 1.72e-26 104
MsG0580027775.01.T01 AT1G08810 45.631 103 56 0 10 112 12 114 2.00e-26 105
MsG0580027775.01.T01 AT5G59780 42.982 114 63 1 11 122 9 122 2.08e-26 104
MsG0580027775.01.T01 AT3G61250 39.456 147 75 3 10 142 12 158 2.34e-26 105
MsG0580027775.01.T01 AT3G02940 43.810 105 58 1 10 113 12 116 2.93e-26 105
MsG0580027775.01.T01 AT3G28910 41.121 107 63 0 6 112 8 114 3.29e-26 105
MsG0580027775.01.T01 AT3G46130 43.860 114 62 1 11 122 10 123 3.30e-26 104
MsG0580027775.01.T01 AT4G01680 47.170 106 56 0 10 115 12 117 3.44e-26 105
MsG0580027775.01.T01 AT5G26660 47.170 106 56 0 10 115 12 117 3.67e-26 106
MsG0580027775.01.T01 AT3G01140 42.056 107 62 0 6 112 8 114 4.40e-26 105
MsG0580027775.01.T01 AT3G02940 43.810 105 58 1 10 113 12 116 4.51e-26 105
MsG0580027775.01.T01 AT3G02940 43.810 105 58 1 10 113 12 116 4.51e-26 105
MsG0580027775.01.T01 AT3G47600 42.718 103 59 0 10 112 12 114 5.40e-26 105
MsG0580027775.01.T01 AT4G05100 44.762 105 57 1 10 113 13 117 5.98e-26 105
MsG0580027775.01.T01 AT5G62470 42.056 107 62 0 6 112 8 114 6.67e-26 105
MsG0580027775.01.T01 AT1G48000 44.000 100 56 0 10 109 32 131 8.27e-26 102
MsG0580027775.01.T01 AT1G57560 41.221 131 74 2 10 137 12 142 8.29e-26 104
MsG0580027775.01.T01 AT3G01140 42.056 107 62 0 6 112 51 157 8.62e-26 105
MsG0580027775.01.T01 AT4G37260 51.485 101 48 1 12 112 13 112 9.34e-26 104
MsG0580027775.01.T01 AT5G16770 43.810 105 58 1 10 113 12 116 1.19e-25 104
MsG0580027775.01.T01 AT5G16770 43.810 105 58 1 10 113 12 116 1.19e-25 104
MsG0580027775.01.T01 AT1G57560 39.850 133 77 2 10 139 12 144 1.30e-25 103
MsG0580027775.01.T01 AT1G16490 43.925 107 60 0 6 112 10 116 1.34e-25 103
MsG0580027775.01.T01 AT3G23250 37.879 132 81 1 6 136 8 139 1.52e-25 103
MsG0580027775.01.T01 AT5G16770 43.810 105 58 1 10 113 12 116 1.78e-25 103
MsG0580027775.01.T01 AT5G16770 43.810 105 58 1 10 113 12 116 1.78e-25 103
MsG0580027775.01.T01 AT1G79180 40.496 121 71 1 6 125 10 130 2.11e-25 102
MsG0580027775.01.T01 AT3G30210 37.500 136 78 1 11 146 28 156 2.27e-25 102
MsG0580027775.01.T01 AT1G09540 46.602 103 55 0 10 112 12 114 2.35e-25 104
MsG0580027775.01.T01 AT3G53200 43.750 112 61 1 10 119 9 120 3.52e-25 101
MsG0580027775.01.T01 AT5G61420 33.163 196 106 5 10 200 12 187 3.70e-25 103
MsG0580027775.01.T01 AT2G23290 51.485 101 48 1 12 112 13 112 4.08e-25 102
MsG0580027775.01.T01 AT5G10280 43.689 103 58 0 10 112 12 114 5.29e-25 102
MsG0580027775.01.T01 AT4G17785 44.660 103 57 0 10 112 13 115 1.05e-24 102
MsG0580027775.01.T01 AT4G17785 44.660 103 57 0 10 112 13 115 1.06e-24 102
MsG0580027775.01.T01 AT3G48920 46.078 102 55 0 11 112 19 120 1.06e-24 100
MsG0580027775.01.T01 AT1G18570 40.876 137 74 3 10 146 13 142 1.16e-24 102
MsG0580027775.01.T01 AT3G13890 44.643 112 53 1 10 112 12 123 1.34e-24 102
MsG0580027775.01.T01 AT5G62470 42.056 107 61 1 6 112 8 113 1.42e-24 101
MsG0580027775.01.T01 AT1G18710 42.149 121 67 2 10 127 12 132 1.73e-24 100
MsG0580027775.01.T01 AT2G31180 39.286 112 67 1 6 116 8 119 1.81e-24 99.4
MsG0580027775.01.T01 AT5G07690 42.308 104 60 0 10 113 12 115 1.89e-24 101
MsG0580027775.01.T01 AT1G56160 41.121 107 63 0 6 112 10 116 2.10e-24 100
MsG0580027775.01.T01 AT5G57620 43.519 108 60 1 6 112 8 115 2.20e-24 100
MsG0580027775.01.T01 AT4G09460 37.956 137 81 3 6 141 8 141 2.88e-24 98.6
MsG0580027775.01.T01 AT2G47460 40.171 117 70 0 6 122 8 124 3.08e-24 101
MsG0580027775.01.T01 AT5G07700 43.689 103 58 0 10 112 12 114 3.99e-24 100
MsG0580027775.01.T01 AT5G07700 43.689 103 58 0 10 112 12 114 3.99e-24 100
MsG0580027775.01.T01 AT5G23000 45.283 106 56 2 10 113 12 117 5.10e-24 99.8
MsG0580027775.01.T01 AT1G68320 39.623 106 64 0 10 115 19 124 5.27e-24 99.0
MsG0580027775.01.T01 AT3G24310 37.500 128 73 2 6 133 15 135 5.96e-24 98.6
MsG0580027775.01.T01 AT5G60890 44.660 103 57 0 10 112 12 114 6.81e-24 99.0
MsG0580027775.01.T01 AT1G35515 42.593 108 60 2 6 112 8 114 1.47e-23 96.3
MsG0580027775.01.T01 AT4G34990 31.176 170 102 3 6 160 8 177 1.51e-23 97.4
MsG0580027775.01.T01 AT4G37780 43.269 104 58 1 10 112 12 115 1.52e-23 98.2
MsG0580027775.01.T01 AT2G36890 40.741 108 63 1 6 112 8 115 1.62e-23 97.8
MsG0580027775.01.T01 AT4G38620 32.961 179 106 4 6 174 8 182 1.74e-23 97.4
MsG0580027775.01.T01 AT2G36890 40.741 108 63 1 6 112 49 156 2.09e-23 98.6
MsG0580027775.01.T01 AT1G25340 39.048 105 64 0 11 115 19 123 2.56e-23 97.1
MsG0580027775.01.T01 AT2G39880 48.515 101 51 1 12 112 50 149 2.60e-23 98.6
MsG0580027775.01.T01 AT1G22640 41.121 107 63 0 6 112 8 114 2.98e-23 96.3
MsG0580027775.01.T01 AT4G13480 40.196 102 61 0 11 112 7 108 3.18e-23 96.3
MsG0580027775.01.T01 AT4G18770 37.838 148 89 3 3 148 208 354 3.43e-23 99.0
MsG0580027775.01.T01 AT5G49330 41.121 107 63 0 6 112 8 114 3.78e-23 97.8
MsG0580027775.01.T01 AT4G01680 43.220 118 55 2 10 115 12 129 4.16e-23 97.8
MsG0580027775.01.T01 AT5G14750 43.434 99 56 0 11 109 17 115 5.21e-23 94.4
MsG0580027775.01.T01 AT5G40330 41.284 109 64 0 1 109 3 111 6.50e-23 94.7
MsG0580027775.01.T01 AT1G06180 40.187 107 64 0 6 112 8 114 1.21e-22 94.4
MsG0580027775.01.T01 AT2G16720 42.593 108 60 2 6 112 8 114 1.51e-22 94.7
MsG0580027775.01.T01 AT3G62610 39.316 117 71 0 6 122 8 124 1.67e-22 95.9
MsG0580027775.01.T01 AT5G56110 40.187 107 64 0 6 112 8 114 2.07e-22 95.5
MsG0580027775.01.T01 AT3G12820 42.056 107 62 0 6 112 10 116 2.27e-22 93.6
MsG0580027775.01.T01 AT5G52600 40.187 107 64 0 2 108 4 110 2.31e-22 92.8
MsG0580027775.01.T01 AT3G13540 37.600 125 75 2 10 131 23 147 2.49e-22 93.6
MsG0580027775.01.T01 AT3G28470 43.689 103 58 0 6 108 8 110 2.77e-22 95.1
MsG0580027775.01.T01 AT1G66230 40.650 123 70 1 10 129 12 134 2.90e-22 94.4
MsG0580027775.01.T01 AT2G26950 39.806 103 62 0 12 114 18 120 4.02e-22 95.5
MsG0580027775.01.T01 AT3G27920 39.516 124 66 2 11 125 15 138 4.39e-22 92.4
MsG0580027775.01.T01 AT5G02320 43.333 120 64 2 10 126 65 183 4.60e-22 96.3
MsG0580027775.01.T01 AT5G02320 43.333 120 64 2 10 126 125 243 5.08e-22 96.3
MsG0580027775.01.T01 AT5G02320 43.333 120 64 2 10 126 125 243 5.08e-22 96.3
MsG0580027775.01.T01 AT3G49690 41.739 115 66 1 6 119 8 122 5.11e-22 94.0
MsG0580027775.01.T01 AT4G25560 43.137 102 58 0 11 112 11 112 5.15e-22 93.6
MsG0580027775.01.T01 AT5G35550 30.909 220 126 7 7 224 11 206 6.87e-22 92.8
MsG0580027775.01.T01 AT5G11050 39.831 118 68 2 10 125 103 219 8.54e-22 94.7
MsG0580027775.01.T01 AT3G08500 43.689 103 58 0 10 112 30 132 1.01e-21 94.0
MsG0580027775.01.T01 AT1G74430 38.655 119 70 2 10 125 12 130 1.04e-21 92.4
MsG0580027775.01.T01 AT5G16600 39.850 133 74 2 10 136 12 144 1.30e-21 93.2
MsG0580027775.01.T01 AT5G12870 42.056 107 61 1 10 115 18 124 1.57e-21 92.0
MsG0580027775.01.T01 AT3G09230 46.535 101 53 1 12 112 55 154 1.73e-21 93.6
MsG0580027775.01.T01 AT5G65790 40.870 115 67 1 6 119 8 122 1.77e-21 93.6
MsG0580027775.01.T01 AT4G22680 42.718 103 59 0 10 112 12 114 2.61e-21 91.3
MsG0580027775.01.T01 AT5G14340 37.168 113 71 0 10 122 24 136 3.83e-21 90.9
MsG0580027775.01.T01 AT1G25340 38.095 105 60 1 11 115 19 118 1.10e-20 89.7
MsG0580027775.01.T01 AT3G29020 44.231 104 57 1 12 115 67 169 1.25e-20 90.1
MsG0580027775.01.T01 AT1G74080 40.777 103 61 0 10 112 12 114 1.28e-20 90.5
MsG0580027775.01.T01 AT3G09370 43.396 106 59 1 12 117 135 239 1.34e-20 92.0
MsG0580027775.01.T01 AT3G29020 44.231 104 57 1 12 115 65 167 1.39e-20 88.6
MsG0580027775.01.T01 AT4G32730 42.202 109 61 2 10 117 85 192 1.43e-20 92.4
MsG0580027775.01.T01 AT4G32730 42.202 109 61 2 10 117 85 192 1.43e-20 92.4
MsG0580027775.01.T01 AT4G32730 42.202 109 61 2 10 117 85 192 1.43e-20 92.4
MsG0580027775.01.T01 AT4G32730 42.202 109 61 2 10 117 85 192 1.43e-20 92.4
MsG0580027775.01.T01 AT4G32730 42.202 109 61 2 10 117 85 192 1.48e-20 92.0
MsG0580027775.01.T01 AT3G09370 43.396 106 59 1 12 117 130 234 1.49e-20 91.7
MsG0580027775.01.T01 AT4G12350 40.496 121 67 2 10 126 12 131 1.58e-20 89.7
MsG0580027775.01.T01 AT1G25340 38.095 105 60 1 11 115 19 118 1.65e-20 89.7
MsG0580027775.01.T01 AT5G58850 41.818 110 61 2 12 119 105 213 1.89e-20 91.3
MsG0580027775.01.T01 AT1G79180 32.903 155 68 3 6 125 10 163 1.96e-20 90.1
MsG0580027775.01.T01 AT3G09370 43.396 106 59 1 12 117 143 247 2.12e-20 91.3
MsG0580027775.01.T01 AT3G06490 42.453 106 61 0 10 115 19 124 2.68e-20 89.7
MsG0580027775.01.T01 AT5G11510 38.889 108 65 1 10 117 79 185 3.42e-20 91.3
MsG0580027775.01.T01 AT5G11510 38.889 108 65 1 10 117 79 185 3.42e-20 91.3
MsG0580027775.01.T01 AT5G11510 38.889 108 65 1 10 117 79 185 3.42e-20 91.3
MsG0580027775.01.T01 AT5G49620 42.718 103 59 0 10 112 26 128 3.45e-20 89.0
MsG0580027775.01.T01 AT5G11510 38.889 108 65 1 10 117 79 185 4.54e-20 90.9
MsG0580027775.01.T01 AT5G11510 38.889 108 65 1 10 117 79 185 4.91e-20 90.5
MsG0580027775.01.T01 AT5G40360 38.532 109 66 1 6 114 152 259 1.02e-19 88.6
MsG0580027775.01.T01 AT5G52260 41.379 116 67 1 11 125 13 128 1.36e-19 86.7
MsG0580027775.01.T01 AT1G69560 44.000 100 55 1 7 106 102 200 2.47e-19 87.0
MsG0580027775.01.T01 AT1G69560 44.000 100 55 1 7 106 118 216 2.81e-19 87.0
MsG0580027775.01.T01 AT1G26780 39.200 125 62 2 10 121 96 219 3.44e-19 85.9
MsG0580027775.01.T01 AT1G26780 39.200 125 62 2 10 121 96 219 3.50e-19 87.0
MsG0580027775.01.T01 AT5G17800 41.739 115 63 2 12 123 93 206 5.13e-19 85.9
MsG0580027775.01.T01 AT3G27810 35.338 133 81 2 44 173 5 135 7.25e-19 82.4
MsG0580027775.01.T01 AT5G62320 40.000 110 59 1 10 112 13 122 1.32e-18 83.6
MsG0580027775.01.T01 AT3G27785 37.383 107 66 1 6 112 183 288 1.81e-18 85.5
MsG0580027775.01.T01 AT1G17950 43.269 104 55 2 12 112 5 107 2.33e-18 82.8
MsG0580027775.01.T01 AT4G33450 39.837 123 68 3 11 130 18 137 2.95e-18 82.8
MsG0580027775.01.T01 AT1G66370 37.209 129 72 2 10 129 8 136 4.01e-18 82.0
MsG0580027775.01.T01 AT3G46130 45.349 86 45 1 39 122 6 91 8.07e-18 80.9
MsG0580027775.01.T01 AT5G59780 46.914 81 41 1 44 122 21 101 1.13e-17 80.1
MsG0580027775.01.T01 AT2G25230 35.652 115 71 3 10 123 24 136 1.48e-17 80.5
MsG0580027775.01.T01 AT3G46130 46.914 81 41 1 44 122 21 101 1.50e-17 80.5
MsG0580027775.01.T01 AT1G66380 40.404 99 59 0 10 108 8 106 2.10e-17 77.4
MsG0580027775.01.T01 AT1G56650 40.404 99 59 0 10 108 8 106 3.75e-17 79.7
MsG0580027775.01.T01 AT5G40350 46.377 69 37 0 44 112 6 74 4.56e-17 77.4
MsG0580027775.01.T01 AT5G26660 49.315 73 36 1 44 115 15 87 7.04e-17 79.7
MsG0580027775.01.T01 AT5G39700 38.261 115 70 1 1 115 45 158 8.47e-17 77.4
MsG0580027775.01.T01 AT1G73410 44.231 104 54 2 12 112 6 108 8.94e-17 78.6
MsG0580027775.01.T01 AT5G49620 37.607 117 59 1 10 112 26 142 1.08e-16 79.3
MsG0580027775.01.T01 AT1G73410 44.231 104 54 2 12 112 6 108 1.38e-16 77.0
MsG0580027775.01.T01 AT4G00540 42.727 110 58 3 10 115 101 209 2.11e-16 79.3
MsG0580027775.01.T01 AT4G00540 42.727 110 58 3 10 115 99 207 3.22e-16 79.0
MsG0580027775.01.T01 AT3G53200 46.154 78 40 1 44 119 10 87 3.80e-16 75.9
MsG0580027775.01.T01 AT1G66390 38.000 100 62 0 10 109 8 107 1.85e-15 74.7
MsG0580027775.01.T01 AT5G40430 34.234 111 71 2 10 120 52 160 1.93e-14 72.0
MsG0580027775.01.T01 AT2G02820 31.034 145 79 3 15 159 33 156 2.57e-14 73.2
MsG0580027775.01.T01 AT3G47600 44.928 69 38 0 44 112 40 108 3.68e-14 72.0
MsG0580027775.01.T01 AT2G02820 31.034 145 79 3 15 159 33 156 4.25e-14 72.8
MsG0580027775.01.T01 AT2G02820 31.034 145 79 3 15 159 33 156 5.50e-14 71.6
MsG0580027775.01.T01 AT5G35550 36.752 117 68 3 44 158 51 163 5.72e-14 70.9
MsG0580027775.01.T01 AT3G12820 46.269 67 36 0 46 112 2 68 6.50e-14 69.3
MsG0580027775.01.T01 AT1G14350 33.962 106 69 1 15 120 28 132 8.11e-14 71.6
MsG0580027775.01.T01 AT1G14350 33.962 106 69 1 15 120 28 132 8.11e-14 71.6
MsG0580027775.01.T01 AT2G37630 36.893 103 63 1 15 115 7 109 9.18e-14 71.2
MsG0580027775.01.T01 AT5G14750 45.312 64 35 0 46 109 18 81 3.94e-13 66.6
MsG0580027775.01.T01 AT5G59780 48.148 54 26 1 71 122 4 57 4.86e-11 60.8
MsG0580027775.01.T01 AT3G46130 48.148 54 26 1 71 122 4 57 8.62e-11 60.5

Find 70 sgRNAs with CRISPR-Local

Find 121 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAAACATGTCCATAAAAT+TGG 0.122667 5:+68328048 None:intergenic
TTCCAAATATGTAGCAATTT+TGG 0.130777 5:+68328808 None:intergenic
GGCCAAAATTGCTACATATT+TGG 0.140847 5:-68328810 MsG0580027775.01.T01:CDS
TACTTACCCAACTTCTTATA+TGG 0.155167 5:-68328299 MsG0580027775.01.T01:CDS
ATTGAACTACAGGGGCAATT+TGG 0.218760 5:-68328842 MsG0580027775.01.T01:CDS
TAAGTTCACTTTCCAAATTT+TGG 0.233054 5:+68328221 None:intergenic
TTGTGTTTCTGCTGCTTTGA+TGG 0.256433 5:+68328701 None:intergenic
AAAGCCAAACTACCAAAATT+TGG 0.257129 5:-68328233 MsG0580027775.01.T01:CDS
AAGTTCAAACTGTTTCTTTC+AGG 0.283752 5:-68327939 MsG0580027775.01.T01:CDS
GGAAAGTCCATCTGTGATTC+AGG 0.284117 5:+68328115 None:intergenic
TTTGGAGTAGCAGGAGAAAA+AGG 0.292990 5:-68328757 MsG0580027775.01.T01:CDS
ACAATGATGTGAAGAACTTT+TGG 0.305459 5:-68328775 MsG0580027775.01.T01:CDS
TTGAAACATGTTAACAAATA+TGG 0.313597 5:-68329771 MsG0580027775.01.T01:CDS
AATTTGGAAAGTGAACTTAA+TGG 0.324796 5:-68328217 MsG0580027775.01.T01:CDS
TAGTTTGGCTTTGTCAAATC+TGG 0.330481 5:+68328244 None:intergenic
TTGAACTACAGGGGCAATTT+GGG 0.372711 5:-68328841 MsG0580027775.01.T01:CDS
AGTTCTTGGCAAAAGACCTT+TGG 0.382985 5:+68329722 None:intergenic
AGGGGCAATTTGGGAACAAA+TGG 0.384910 5:-68328832 MsG0580027775.01.T01:CDS
GAAAATCATGTCGGTTAAGA+TGG 0.389252 5:-68329698 MsG0580027775.01.T01:CDS
GTCCATAAAATTGGGATCAA+AGG 0.405968 5:+68328057 None:intergenic
ACTTACCCAACTTCTTATAT+GGG 0.406058 5:-68328298 MsG0580027775.01.T01:CDS
TGCTGCTTTGATGGTGGTGA+TGG 0.407537 5:+68328710 None:intergenic
ACAAATATGGTCCTAGAGAT+TGG 0.416347 5:-68329758 MsG0580027775.01.T01:CDS
AAGGGTGGTGATTGAACTAC+AGG 0.423925 5:-68328852 MsG0580027775.01.T01:CDS
TTGCCAACTCTTGGACTTGA+AGG 0.431599 5:-68327977 MsG0580027775.01.T01:CDS
TAATGGAATTATTGAGTTTG+AGG 0.433166 5:-68328200 MsG0580027775.01.T01:CDS
TGTTTCCCATATAAGAAGTT+GGG 0.440519 5:+68328293 None:intergenic
GGAACTAGGTTGCCAACTCT+TGG 0.442660 5:-68327986 MsG0580027775.01.T01:CDS
TCAAACATGTCCATAAAATT+GGG 0.444603 5:+68328049 None:intergenic
AGCTGATTTGAACCGCATTC+AGG 0.447499 5:+68328334 None:intergenic
TGAACAAGATCTTGGCACTC+TGG 0.451297 5:+68328085 None:intergenic
TCCATAAAATTGGGATCAAA+GGG 0.451870 5:+68328058 None:intergenic
TCTTGGCACTCTGGGAATAG+TGG 0.453927 5:+68328094 None:intergenic
TTGTTTCCCATATAAGAAGT+TGG 0.464251 5:+68328292 None:intergenic
GATGGTGGTGATGGTGTCCT+TGG 0.466017 5:+68328719 None:intergenic
TAATCAAGTAAAAGTTGAAA+AGG 0.467889 5:-68328663 MsG0580027775.01.T01:intron
AGGGATCTTGAACAAGATCT+TGG 0.482835 5:+68328077 None:intergenic
CAAAAGACCTTTGGATCGAA+TGG 0.500376 5:+68329731 None:intergenic
ATCTGTGATTCAGGGAGTAA+TGG 0.504206 5:+68328124 None:intergenic
TGAATGCGGTTCAAATCAGC+TGG 0.514929 5:-68328332 MsG0580027775.01.T01:CDS
TTCGTTAGAGGAAGAAAGGG+TGG 0.516710 5:-68328867 MsG0580027775.01.T01:CDS
CGAATGGAGCTCCAATCTCT+AGG 0.517393 5:+68329747 None:intergenic
AGCGTGTGGAGCAAGAAGAA+TGG 0.524074 5:-68328007 MsG0580027775.01.T01:CDS
ATCAAAGCAGCAGAAACACA+AGG 0.531957 5:-68328699 MsG0580027775.01.T01:CDS
GAACAAGATCTTGGCACTCT+GGG 0.532503 5:+68328086 None:intergenic
GGGGCAATTTGGGAACAAAT+GGG 0.537798 5:-68328831 MsG0580027775.01.T01:CDS
TTTCCTTCAAGTCCAAGAGT+TGG 0.543581 5:+68327974 None:intergenic
TCATCTTCTTCACTACTCCA+TGG 0.545375 5:+68329801 None:intergenic
TGTTTCTGCTGCTTTGATGG+TGG 0.546809 5:+68328704 None:intergenic
AAAATTGCTACATATTTGGA+AGG 0.549906 5:-68328806 MsG0580027775.01.T01:CDS
ATGGAAAGAGAATATGAAAG+AGG 0.565781 5:-68329840 MsG0580027775.01.T01:CDS
CTATTTCAGGTTCCTGAATG+CGG 0.567538 5:-68328346 MsG0580027775.01.T01:intron
AAAATCATGTCGGTTAAGAT+GGG 0.567797 5:-68329697 MsG0580027775.01.T01:intron
TGGAGCTCCATTCGATCCAA+AGG 0.580870 5:-68329738 MsG0580027775.01.T01:CDS
TTGGCTTTGTCAAATCTGGA+AGG 0.584704 5:+68328248 None:intergenic
GAAAGTCCATCTGTGATTCA+GGG 0.593626 5:+68328116 None:intergenic
TTCTTATATGGGAAACAAAG+AGG 0.593635 5:-68328287 MsG0580027775.01.T01:CDS
TGCTGATGATGACTCAAATG+AGG 0.604159 5:+68328156 None:intergenic
ATTACTCCCTGAATCACAGA+TGG 0.605254 5:-68328122 MsG0580027775.01.T01:CDS
GGATGGAGAGGAATTATCCA+AGG 0.606339 5:-68328736 MsG0580027775.01.T01:CDS
ATGTGTGATTTCAATTGTAG+AGG 0.626982 5:-68328899 MsG0580027775.01.T01:CDS
AATGAGGGTACTGTGTGAAG+TGG 0.635827 5:+68328172 None:intergenic
GGAGCAAGAAGAATGGAACT+AGG 0.645590 5:-68328000 MsG0580027775.01.T01:CDS
CAAGAACTGGAAAATCATGT+CGG 0.674438 5:-68329707 MsG0580027775.01.T01:CDS
ATGCGGTTCAAATCAGCTGG+AGG 0.677910 5:-68328329 MsG0580027775.01.T01:CDS
TCAAAGCAGCAGAAACACAA+GGG 0.678275 5:-68328698 MsG0580027775.01.T01:CDS
GGGTACTGTGTGAAGTGGAG+TGG 0.686347 5:+68328177 None:intergenic
GCTGATGATGACTCAAATGA+GGG 0.694198 5:+68328157 None:intergenic
GGGTGGTGATTGAACTACAG+GGG 0.701174 5:-68328850 MsG0580027775.01.T01:CDS
AGGGTGGTGATTGAACTACA+GGG 0.704521 5:-68328851 MsG0580027775.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTAATAATAATTAAAGTT+AGG + Chr5:68328118-68328137 None:intergenic 10.0%
!! TGTAATAATAATTAAAGTTA+GGG + Chr5:68328117-68328136 None:intergenic 10.0%
!! ATATTACAAATTTGCAAAAT+AGG + Chr5:68329255-68329274 None:intergenic 15.0%
!! ATTACATTAAAAACAAAAAG+TGG + Chr5:68328178-68328197 None:intergenic 15.0%
!! ATGAATCATCTGATTAATAT+CGG - Chr5:68329273-68329292 MsG0580027775.01.T01:intron 20.0%
!! TAATCAAGTAAAAGTTGAAA+AGG - Chr5:68329078-68329097 MsG0580027775.01.T01:intron 20.0%
!! TTGAAACATGTTAACAAATA+TGG - Chr5:68327970-68327989 MsG0580027775.01.T01:CDS 20.0%
!!! AATGTGTTTGTGTTTTTTTA+TGG - Chr5:68328195-68328214 MsG0580027775.01.T01:CDS 20.0%
!!! ATTTTTCAAAATCAAACAGA+TGG + Chr5:68328604-68328623 None:intergenic 20.0%
! AAAATTGCTACATATTTGGA+AGG - Chr5:68328935-68328954 MsG0580027775.01.T01:intron 25.0%
! AAGTATTCAAAAATCTCAGT+TGG + Chr5:68329833-68329852 None:intergenic 25.0%
! AATACCACCAAAAATTTGAA+AGG + Chr5:68328312-68328331 None:intergenic 25.0%
! AATTTGGAAAGTGAACTTAA+TGG - Chr5:68329524-68329543 MsG0580027775.01.T01:intron 25.0%
! ATACCACCAAAAATTTGAAA+GGG + Chr5:68328311-68328330 None:intergenic 25.0%
! GAAAGAGGTTACATAAAAAA+AGG - Chr5:68327916-68327935 MsG0580027775.01.T01:CDS 25.0%
! TAATGGAATTATTGAGTTTG+AGG - Chr5:68329541-68329560 MsG0580027775.01.T01:intron 25.0%
! TCAAACATGTCCATAAAATT+GGG + Chr5:68329695-68329714 None:intergenic 25.0%
! TGTTTGATTCAATACTTCAT+AGG - Chr5:68328496-68328515 MsG0580027775.01.T01:intron 25.0%
!! ACTTTCACACAGTTAATTTT+TGG + Chr5:68328560-68328579 None:intergenic 25.0%
!! CTTTCACACAGTTAATTTTT+GGG + Chr5:68328559-68328578 None:intergenic 25.0%
!! TAAGTTCACTTTCCAAATTT+TGG + Chr5:68329523-68329542 None:intergenic 25.0%
!! TTCCAAATATGTAGCAATTT+TGG + Chr5:68328936-68328955 None:intergenic 25.0%
!! TTGTTTGTTCCTACTATTTT+TGG + Chr5:68328636-68328655 None:intergenic 25.0%
!!! AATCGATAATTTTAGTGTGA+AGG - Chr5:68329339-68329358 MsG0580027775.01.T01:intron 25.0%
!!! ATCGATAATTTTAGTGTGAA+GGG - Chr5:68329340-68329359 MsG0580027775.01.T01:intron 25.0%
!!! TTGTTTTGTCTCTTCTTTAA+AGG - Chr5:68328716-68328735 MsG0580027775.01.T01:CDS 25.0%
AAAGCCAAACTACCAAAATT+TGG - Chr5:68329508-68329527 MsG0580027775.01.T01:intron 30.0%
ACTTACCCAACTTCTTATAT+GGG - Chr5:68329443-68329462 MsG0580027775.01.T01:intron 30.0%
ATGGAAAGAGAATATGAAAG+AGG - Chr5:68327901-68327920 MsG0580027775.01.T01:CDS 30.0%
ATGGTGAAAATGTCTATTTC+AGG - Chr5:68329382-68329401 MsG0580027775.01.T01:intron 30.0%
ATGTGTGATTTCAATTGTAG+AGG - Chr5:68328842-68328861 MsG0580027775.01.T01:CDS 30.0%
ATTACCAATGTTAATGTGTC+AGG - Chr5:68328456-68328475 MsG0580027775.01.T01:intron 30.0%
CTCAAACATGTCCATAAAAT+TGG + Chr5:68329696-68329715 None:intergenic 30.0%
GTTACATAAAAAAAGGACCA+TGG - Chr5:68327923-68327942 MsG0580027775.01.T01:CDS 30.0%
TACTTACCCAACTTCTTATA+TGG - Chr5:68329442-68329461 MsG0580027775.01.T01:intron 30.0%
TCCATAAAATTGGGATCAAA+GGG + Chr5:68329686-68329705 None:intergenic 30.0%
TGTTTCCCATATAAGAAGTT+GGG + Chr5:68329451-68329470 None:intergenic 30.0%
TTACCAATGTTAATGTGTCA+GGG - Chr5:68328457-68328476 MsG0580027775.01.T01:intron 30.0%
TTCTTATATGGGAAACAAAG+AGG - Chr5:68329454-68329473 MsG0580027775.01.T01:intron 30.0%
TTGTTTCCCATATAAGAAGT+TGG + Chr5:68329452-68329471 None:intergenic 30.0%
! AAAATCATGTCGGTTAAGAT+GGG - Chr5:68328044-68328063 MsG0580027775.01.T01:CDS 30.0%
! AAGTTCAAACTGTTTCTTTC+AGG - Chr5:68329802-68329821 MsG0580027775.01.T01:CDS 30.0%
! AATTTTCGTTAGAGGAAGAA+AGG - Chr5:68328870-68328889 MsG0580027775.01.T01:CDS 30.0%
! ACAATGATGTGAAGAACTTT+TGG - Chr5:68328966-68328985 MsG0580027775.01.T01:intron 30.0%
! ATTAGAAAGTATGGACTTGA+TGG - Chr5:68329363-68329382 MsG0580027775.01.T01:intron 30.0%
! ATTTTCGTTAGAGGAAGAAA+GGG - Chr5:68328871-68328890 MsG0580027775.01.T01:CDS 30.0%
! CTGAATTGTCCAATTTTGTT+CGG - Chr5:68329199-68329218 MsG0580027775.01.T01:intron 30.0%
! TACTTCATAGGTTGAAACAT+TGG - Chr5:68328508-68328527 MsG0580027775.01.T01:intron 30.0%
! TTCACACCCTTTCAAATTTT+TGG - Chr5:68328302-68328321 MsG0580027775.01.T01:CDS 30.0%
!! CTTTCCAAATTTTGGTAGTT+TGG + Chr5:68329515-68329534 None:intergenic 30.0%
!!! TGTTACTACGTTTTCAAGTT+GGG + Chr5:68328084-68328103 None:intergenic 30.0%
!!! TTGTTACTACGTTTTCAAGT+TGG + Chr5:68328085-68328104 None:intergenic 30.0%
ACAAATATGGTCCTAGAGAT+TGG - Chr5:68327983-68328002 MsG0580027775.01.T01:CDS 35.0%
CAAGAACTGGAAAATCATGT+CGG - Chr5:68328034-68328053 MsG0580027775.01.T01:CDS 35.0%
CATAAGCGTCACTGTTAAAT+AGG + Chr5:68328367-68328386 None:intergenic 35.0%
CTTATGATCGAATGGATGAT+TGG - Chr5:68328381-68328400 MsG0580027775.01.T01:intron 35.0%
GGCCAAAATTGCTACATATT+TGG - Chr5:68328931-68328950 MsG0580027775.01.T01:intron 35.0%
GTCCATAAAATTGGGATCAA+AGG + Chr5:68329687-68329706 None:intergenic 35.0%
TGTGAAGGGATTAGAAAGTA+TGG - Chr5:68329354-68329373 MsG0580027775.01.T01:intron 35.0%
TTACCCTGACACATTAACAT+TGG + Chr5:68328463-68328482 None:intergenic 35.0%
! AAGGGTGTGAAAAAAAGATC+AGG + Chr5:68328293-68328312 None:intergenic 35.0%
! AGGATGCAAATTTTCGTTAG+AGG - Chr5:68328862-68328881 MsG0580027775.01.T01:CDS 35.0%
! GAAAATCATGTCGGTTAAGA+TGG - Chr5:68328043-68328062 MsG0580027775.01.T01:CDS 35.0%
! TCCCTTTGATCCCAATTTTA+TGG - Chr5:68329682-68329701 MsG0580027775.01.T01:intron 35.0%
!! AAAAATGTTCTGAAAGCGTG+TGG - Chr5:68329720-68329739 MsG0580027775.01.T01:CDS 35.0%
!! ACACCCTTTCAAATTTTTGG+TGG - Chr5:68328305-68328324 MsG0580027775.01.T01:CDS 35.0%
!! TAGTTTGGCTTTGTCAAATC+TGG + Chr5:68329500-68329519 None:intergenic 35.0%
AGGGATCTTGAACAAGATCT+TGG + Chr5:68329667-68329686 None:intergenic 40.0%
AGTTCTTGGCAAAAGACCTT+TGG + Chr5:68328022-68328041 None:intergenic 40.0%
ATCAAAGCAGCAGAAACACA+AGG - Chr5:68329042-68329061 MsG0580027775.01.T01:intron 40.0%
ATCTGTGATTCAGGGAGTAA+TGG + Chr5:68329620-68329639 None:intergenic 40.0%
ATTACTCCCTGAATCACAGA+TGG - Chr5:68329619-68329638 MsG0580027775.01.T01:intron 40.0%
ATTGAACTACAGGGGCAATT+TGG - Chr5:68328899-68328918 MsG0580027775.01.T01:CDS 40.0%
CAAAACGCGAAGTCAAAATG+TGG + Chr5:68329230-68329249 None:intergenic 40.0%
CAAAAGACCTTTGGATCGAA+TGG + Chr5:68328013-68328032 None:intergenic 40.0%
GAAAGTCCATCTGTGATTCA+GGG + Chr5:68329628-68329647 None:intergenic 40.0%
GTCTCTGTGCCAAAAATAGT+AGG - Chr5:68328624-68328643 MsG0580027775.01.T01:intron 40.0%
TCAAAGCAGCAGAAACACAA+GGG - Chr5:68329043-68329062 MsG0580027775.01.T01:intron 40.0%
TCAGAATGATTGCGTGATTG+CGG + Chr5:68329183-68329202 None:intergenic 40.0%
TCATCTTCTTCACTACTCCA+TGG + Chr5:68327943-68327962 None:intergenic 40.0%
TTGAACTACAGGGGCAATTT+GGG - Chr5:68328900-68328919 MsG0580027775.01.T01:CDS 40.0%
TTTCCTTCAAGTCCAAGAGT+TGG + Chr5:68329770-68329789 None:intergenic 40.0%
! AAAGGTCTTTTGCCAAGAAC+TGG - Chr5:68328021-68328040 MsG0580027775.01.T01:CDS 40.0%
! CGACATGATTTTCCAGTTCT+TGG + Chr5:68328036-68328055 None:intergenic 40.0%
! GCTGATGATGACTCAAATGA+GGG + Chr5:68329587-68329606 None:intergenic 40.0%
! GTGGACTATCCGAACAAAAT+TGG + Chr5:68329211-68329230 None:intergenic 40.0%
! TGCTGATGATGACTCAAATG+AGG + Chr5:68329588-68329607 None:intergenic 40.0%
! TTTGGAGTAGCAGGAGAAAA+AGG - Chr5:68328984-68329003 MsG0580027775.01.T01:intron 40.0%
!! CTATTTCAGGTTCCTGAATG+CGG - Chr5:68329395-68329414 MsG0580027775.01.T01:intron 40.0%
!! TTGGCTTTGTCAAATCTGGA+AGG + Chr5:68329496-68329515 None:intergenic 40.0%
!! TTGTGTTTCTGCTGCTTTGA+TGG + Chr5:68329043-68329062 None:intergenic 40.0%
!!! TGAAGAACTTTTGGAGTAGC+AGG - Chr5:68328975-68328994 MsG0580027775.01.T01:intron 40.0%
AAGGGTGGTGATTGAACTAC+AGG - Chr5:68328889-68328908 MsG0580027775.01.T01:CDS 45.0%
AGGGGCAATTTGGGAACAAA+TGG - Chr5:68328909-68328928 MsG0580027775.01.T01:intron 45.0%
AGGGTGGTGATTGAACTACA+GGG - Chr5:68328890-68328909 MsG0580027775.01.T01:CDS 45.0%
CAGTGACGCTTATGATCGAA+TGG - Chr5:68328373-68328392 MsG0580027775.01.T01:intron 45.0%
CGTGTGACAATGTGAATGCA+AGG - Chr5:68329306-68329325 MsG0580027775.01.T01:intron 45.0%
GAACAAGATCTTGGCACTCT+GGG + Chr5:68329658-68329677 None:intergenic 45.0%
GAGTAGCAGGAGAAAAAGGA+TGG - Chr5:68328988-68329007 MsG0580027775.01.T01:intron 45.0%
GGAAAGTCCATCTGTGATTC+AGG + Chr5:68329629-68329648 None:intergenic 45.0%
GGAGCAAGAAGAATGGAACT+AGG - Chr5:68329741-68329760 MsG0580027775.01.T01:CDS 45.0%
GGATGGAGAGGAATTATCCA+AGG - Chr5:68329005-68329024 MsG0580027775.01.T01:intron 45.0%
GGGGCAATTTGGGAACAAAT+GGG - Chr5:68328910-68328929 MsG0580027775.01.T01:intron 45.0%
TGAACAAGATCTTGGCACTC+TGG + Chr5:68329659-68329678 None:intergenic 45.0%
TGAATGCGGTTCAAATCAGC+TGG - Chr5:68329409-68329428 MsG0580027775.01.T01:intron 45.0%
TTCGTTAGAGGAAGAAAGGG+TGG - Chr5:68328874-68328893 MsG0580027775.01.T01:CDS 45.0%
TTGCCAACTCTTGGACTTGA+AGG - Chr5:68329764-68329783 MsG0580027775.01.T01:CDS 45.0%
!! AATGAGGGTACTGTGTGAAG+TGG + Chr5:68329572-68329591 None:intergenic 45.0%
!! AGCTGATTTGAACCGCATTC+AGG + Chr5:68329410-68329429 None:intergenic 45.0%
!! TGTTTCTGCTGCTTTGATGG+TGG + Chr5:68329040-68329059 None:intergenic 45.0%
AGCGTGTGGAGCAAGAAGAA+TGG - Chr5:68329734-68329753 MsG0580027775.01.T01:CDS 50.0%
ATGCGGTTCAAATCAGCTGG+AGG - Chr5:68329412-68329431 MsG0580027775.01.T01:intron 50.0%
CGAATGGAGCTCCAATCTCT+AGG + Chr5:68327997-68328016 None:intergenic 50.0%
GCAGGAGAAAAAGGATGGAG+AGG - Chr5:68328993-68329012 MsG0580027775.01.T01:intron 50.0%
GGAACTAGGTTGCCAACTCT+TGG - Chr5:68329755-68329774 MsG0580027775.01.T01:CDS 50.0%
GGGTGGTGATTGAACTACAG+GGG - Chr5:68328891-68328910 MsG0580027775.01.T01:CDS 50.0%
TGGAGCTCCATTCGATCCAA+AGG - Chr5:68328003-68328022 MsG0580027775.01.T01:CDS 50.0%
! TCTTGGCACTCTGGGAATAG+TGG + Chr5:68329650-68329669 None:intergenic 50.0%
!! TGCTGCTTTGATGGTGGTGA+TGG + Chr5:68329034-68329053 None:intergenic 50.0%
! GGGTACTGTGTGAAGTGGAG+TGG + Chr5:68329567-68329586 None:intergenic 55.0%
!! GATGGTGGTGATGGTGTCCT+TGG + Chr5:68329025-68329044 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr5 gene 68327901 68329862 68327901 ID=MsG0580027775.01;Name=MsG0580027775.01
Chr5 mRNA 68327901 68329862 68327901 ID=MsG0580027775.01.T01;Parent=MsG0580027775.01;Name=MsG0580027775.01.T01;_AED=0.50;_eAED=0.51;_QI=0|0|0|1|0.5|0.33|3|0|295
Chr5 exon 68329698 68329862 68329698 ID=MsG0580027775.01.T01:exon:44393;Parent=MsG0580027775.01.T01
Chr5 exon 68328664 68328927 68328664 ID=MsG0580027775.01.T01:exon:44392;Parent=MsG0580027775.01.T01
Chr5 exon 68327901 68328359 68327901 ID=MsG0580027775.01.T01:exon:44391;Parent=MsG0580027775.01.T01
Chr5 CDS 68329698 68329862 68329698 ID=MsG0580027775.01.T01:cds;Parent=MsG0580027775.01.T01
Chr5 CDS 68328664 68328927 68328664 ID=MsG0580027775.01.T01:cds;Parent=MsG0580027775.01.T01
Chr5 CDS 68327901 68328359 68327901 ID=MsG0580027775.01.T01:cds;Parent=MsG0580027775.01.T01
Gene Sequence

>MsG0580027775.01.T01

ATGGAAAGAGAATATGAAAGAGGTTACATAAAAAAAGGACCATGGAGTAGTGAAGAAGATGAAGTGTTATTGAAACATGTTAACAAATATGGTCCTAGAGATTGGAGCTCCATTCGATCCAAAGGTCTTTTGCCAAGAACTGGAAAATCATGTCGGTTAAGATGGTTTGAAATGTGTGATTTCAATTGTAGAGGATGCAAATTTTCGTTAGAGGAAGAAAGGGTGGTGATTGAACTACAGGGGCAATTTGGGAACAAATGGGCCAAAATTGCTACATATTTGGAAGGAAGAACAGACAATGATGTGAAGAACTTTTGGAGTAGCAGGAGAAAAAGGATGGAGAGGAATTATCCAAGGACACCATCACCACCATCAAAGCAGCAGAAACACAAGGGAAAAGCTACTTCTAATCAAGTAAAAGTTGAAAAGGTTCCTGAATGCGGTTCAAATCAGCTGGAGGAAAATCTTACTTACCCAACTTCTTATATGGGAAACAAAGAGGAATTCAAGATGATCAACCTTCCAGATTTGACAAAGCCAAACTACCAAAATTTGGAAAGTGAACTTAATGGAATTATTGAGTTTGAGGCCACTCCACTTCACACAGTACCCTCATTTGAGTCATCATCAGCATACAACTTTCCATTACTCCCTGAATCACAGATGGACTTTCCACTATTCCCAGAGTGCCAAGATCTTGTTCAAGATCCCTTTGATCCCAATTTTATGGACATGTTTGAGCAGAAAAAATGTTCTGAAAGCGTGTGGAGCAAGAAGAATGGAACTAGGTTGCCAACTCTTGGACTTGAAGGAAATTCTCAGAGTACAAGTTCAAACTGTTTCTTTCAGGACATTCCAACTGAGATTTTTGAATACTTTTCTCAGTAA

Protein sequence

>MsG0580027775.01.T01

MEREYERGYIKKGPWSSEEDEVLLKHVNKYGPRDWSSIRSKGLLPRTGKSCRLRWFEMCDFNCRGCKFSLEEERVVIELQGQFGNKWAKIATYLEGRTDNDVKNFWSSRRKRMERNYPRTPSPPSKQQKHKGKATSNQVKVEKVPECGSNQLEENLTYPTSYMGNKEEFKMINLPDLTKPNYQNLESELNGIIEFEATPLHTVPSFESSSAYNFPLLPESQMDFPLFPECQDLVQDPFDPNFMDMFEQKKCSESVWSKKNGTRLPTLGLEGNSQSTSSNCFFQDIPTEIFEYFSQ*