AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028989.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028989.01.T01 MTR_5g079670 94.977 219 2 3 1 216 1 213 1.33e-147 409
MsG0580028989.01.T01 MTR_4g485530 77.444 133 29 1 1 132 1 133 3.17e-72 218
MsG0580028989.01.T01 MTR_4g073420 55.495 182 74 2 2 183 3 177 9.55e-70 214
MsG0580028989.01.T01 MTR_3g097450 71.200 125 36 0 2 126 3 127 2.14e-68 212
MsG0580028989.01.T01 MTR_8g095390 68.000 125 40 0 2 126 3 127 2.73e-64 202
MsG0580028989.01.T01 MTR_2g011660 68.000 125 39 1 2 125 3 127 7.17e-62 196
MsG0580028989.01.T01 MTR_4g091490 67.200 125 40 1 2 125 3 127 3.12e-61 195
MsG0580028989.01.T01 MTR_1g085040 65.600 125 43 0 2 126 3 127 8.29e-61 194
MsG0580028989.01.T01 MTR_5g029840 66.400 125 42 0 2 126 3 127 1.19e-60 193
MsG0580028989.01.T01 MTR_4g105130 65.600 125 43 0 2 126 3 127 1.79e-60 193
MsG0580028989.01.T01 MTR_3g074520 62.400 125 47 0 2 126 3 127 2.09e-60 192
MsG0580028989.01.T01 MTR_7g011170 65.600 125 43 0 2 126 3 127 2.60e-60 191
MsG0580028989.01.T01 MTR_1g112760 64.800 125 44 0 2 126 4 128 4.44e-60 188
MsG0580028989.01.T01 MTR_3g077110 64.800 125 44 0 2 126 3 127 1.92e-59 190
MsG0580028989.01.T01 MTR_4g102380 64.800 125 44 0 2 126 3 127 6.18e-59 187
MsG0580028989.01.T01 MTR_2g089620 64.516 124 44 0 2 125 3 126 9.46e-59 188
MsG0580028989.01.T01 MTR_4g125520 71.053 114 33 0 2 115 3 116 1.26e-58 187
MsG0580028989.01.T01 MTR_6g012690 64.800 125 44 0 2 126 3 127 3.10e-58 187
MsG0580028989.01.T01 MTR_4g082290 64.000 125 45 0 2 126 3 127 3.92e-58 189
MsG0580028989.01.T01 MTR_3g083540 65.041 123 43 0 4 126 34 156 4.41e-58 186
MsG0580028989.01.T01 MTR_3g065440 63.492 126 46 0 2 127 3 128 5.81e-58 185
MsG0580028989.01.T01 MTR_4g478180 60.800 125 49 0 2 126 4 128 7.95e-58 186
MsG0580028989.01.T01 MTR_1g085640 45.161 217 91 3 2 216 3 193 8.59e-58 187
MsG0580028989.01.T01 MTR_7g110830 44.651 215 97 4 2 216 3 195 1.00e-57 186
MsG0580028989.01.T01 MTR_5g078140 54.839 155 69 1 2 155 3 157 1.03e-57 185
MsG0580028989.01.T01 MTR_7g076740 49.730 185 72 4 2 173 3 179 5.06e-57 183
MsG0580028989.01.T01 MTR_4g082230 63.200 125 46 0 2 126 3 127 5.71e-57 186
MsG0580028989.01.T01 MTR_5g007370 61.111 126 49 0 1 126 2 127 7.48e-57 182
MsG0580028989.01.T01 MTR_8g027345 68.421 114 36 0 2 115 3 116 3.77e-56 180
MsG0580028989.01.T01 MTR_2g064160 62.992 127 47 0 1 127 1 127 7.59e-56 180
MsG0580028989.01.T01 MTR_7g111290 64.800 125 44 0 2 126 3 127 9.05e-56 182
MsG0580028989.01.T01 MTR_6g009430 54.605 152 65 1 2 153 3 150 1.05e-55 180
MsG0580028989.01.T01 MTR_7g117730 66.667 114 38 0 2 115 3 116 1.59e-55 177
MsG0580028989.01.T01 MTR_8g031360 62.205 127 46 2 2 126 3 129 1.81e-54 176
MsG0580028989.01.T01 MTR_4g121460 66.957 115 38 0 2 116 3 117 3.62e-54 176
MsG0580028989.01.T01 MTR_1g100653 62.281 114 43 0 2 115 3 116 8.57e-54 174
MsG0580028989.01.T01 MTR_8g017440 62.712 118 44 0 5 122 6 123 1.10e-53 175
MsG0580028989.01.T01 MTR_7g115650 52.703 148 66 1 2 145 3 150 2.19e-53 170
MsG0580028989.01.T01 MTR_3g461490 60.800 125 49 0 2 126 3 127 2.22e-53 174
MsG0580028989.01.T01 MTR_2g099740 63.559 118 43 0 5 122 6 123 5.00e-53 175
MsG0580028989.01.T01 MTR_8g017500 62.712 118 44 0 5 122 6 123 7.93e-53 173
MsG0580028989.01.T01 MTR_8g098860 64.602 113 40 0 5 117 6 118 8.33e-53 172
MsG0580028989.01.T01 MTR_4g100720 59.091 132 54 0 2 133 4 135 2.46e-52 167
MsG0580028989.01.T01 MTR_1g076150 62.609 115 43 0 1 115 2 116 3.92e-52 169
MsG0580028989.01.T01 MTR_8g017540 62.712 118 44 0 5 122 52 169 6.03e-52 172
MsG0580028989.01.T01 MTR_2g034790 64.035 114 41 0 2 115 3 116 1.22e-51 170
MsG0580028989.01.T01 MTR_8g017340 63.866 119 42 1 5 122 6 124 2.91e-51 172
MsG0580028989.01.T01 MTR_8g017390 65.487 113 38 1 5 116 6 118 1.12e-50 171
MsG0580028989.01.T01 MTR_5g010020 65.714 105 36 0 5 109 6 110 1.72e-50 167
MsG0580028989.01.T01 MTR_1g043050 58.621 116 48 0 1 116 2 117 3.79e-50 164
MsG0580028989.01.T01 MTR_2g089450 60.684 117 46 0 1 117 2 118 4.03e-50 163
MsG0580028989.01.T01 MTR_8g017350 63.025 119 43 1 5 122 6 124 5.14e-50 172
MsG0580028989.01.T01 MTR_1g043080 57.759 116 49 0 1 116 2 117 1.41e-49 162
MsG0580028989.01.T01 MTR_4g065017 58.268 127 47 2 1 121 1 127 2.31e-49 164
MsG0580028989.01.T01 MTR_7g010210 61.207 116 45 0 2 117 3 118 4.20e-49 163
MsG0580028989.01.T01 MTR_7g010210 61.207 116 45 0 2 117 3 118 5.50e-49 161
MsG0580028989.01.T01 MTR_7g096930 56.911 123 53 0 2 124 3 125 6.17e-49 161
MsG0580028989.01.T01 MTR_2g097910 62.857 105 39 0 11 115 20 124 1.77e-48 161
MsG0580028989.01.T01 MTR_3g039990 61.017 118 46 0 1 118 3 120 2.42e-48 160
MsG0580028989.01.T01 MTR_8g020490 63.636 110 40 0 9 118 6 115 7.49e-48 158
MsG0580028989.01.T01 MTR_0140s0030 61.207 116 45 0 2 117 4 119 8.80e-48 160
MsG0580028989.01.T01 MTR_0489s0020 61.207 116 45 0 2 117 4 119 8.80e-48 160
MsG0580028989.01.T01 MTR_0063s0090 59.821 112 45 0 1 112 2 113 1.51e-47 156
MsG0580028989.01.T01 MTR_7g087130 58.400 125 50 1 2 124 3 127 1.82e-47 159
MsG0580028989.01.T01 MTR_1g017000 56.897 116 49 1 2 116 3 118 2.25e-47 156
MsG0580028989.01.T01 MTR_0251s0050 60.000 115 45 1 2 115 3 117 3.06e-47 157
MsG0580028989.01.T01 MTR_3g028740 58.871 124 42 2 1 115 3 126 4.63e-47 158
MsG0580028989.01.T01 MTR_3g103570 58.621 116 47 1 2 116 3 118 6.64e-47 158
MsG0580028989.01.T01 MTR_7g102110 57.627 118 49 1 2 118 3 120 8.43e-47 155
MsG0580028989.01.T01 MTR_4g057635 54.762 126 56 1 2 126 3 128 1.02e-46 157
MsG0580028989.01.T01 MTR_0008s0390 59.483 116 46 1 2 116 3 118 1.09e-46 155
MsG0580028989.01.T01 MTR_6g012180 61.818 110 42 0 1 110 2 111 1.58e-46 156
MsG0580028989.01.T01 MTR_5g042030 59.483 116 47 0 11 126 7 122 2.35e-46 155
MsG0580028989.01.T01 MTR_2g067420 61.468 109 42 0 2 110 5 113 3.46e-46 155
MsG0580028989.01.T01 MTR_0008s0280 57.522 113 48 0 1 113 2 114 3.81e-46 152
MsG0580028989.01.T01 MTR_5g014990 56.897 116 49 1 2 116 3 118 4.17e-46 155
MsG0580028989.01.T01 MTR_0008s0470 57.759 116 48 1 2 116 3 118 7.26e-46 154
MsG0580028989.01.T01 MTR_0197s0010 55.303 132 57 1 15 144 5 136 7.50e-46 152
MsG0580028989.01.T01 MTR_1g017140 56.034 116 50 1 2 116 3 118 9.70e-46 155
MsG0580028989.01.T01 MTR_2g089420 55.556 117 52 0 1 117 1 117 1.32e-45 157
MsG0580028989.01.T01 MTR_2g095520 61.468 109 41 1 2 109 3 111 1.34e-45 154
MsG0580028989.01.T01 MTR_7g109320 60.684 117 46 0 2 118 3 119 3.64e-45 154
MsG0580028989.01.T01 MTR_6g055910 57.143 112 48 0 6 117 9 120 7.89e-45 151
MsG0580028989.01.T01 MTR_1g100667 57.018 114 48 1 13 126 15 127 1.22e-44 150
MsG0580028989.01.T01 MTR_5g079290 61.321 106 41 0 11 116 17 122 1.44e-44 149
MsG0580028989.01.T01 MTR_5g079220 57.658 111 47 0 6 116 16 126 8.88e-44 148
MsG0580028989.01.T01 MTR_5g079120 52.713 129 61 0 7 135 57 185 8.97e-44 149
MsG0580028989.01.T01 MTR_4g097570 59.259 108 43 1 2 108 3 110 1.79e-43 147
MsG0580028989.01.T01 MTR_6g090405 55.172 116 51 1 2 116 3 118 2.34e-43 146
MsG0580028989.01.T01 MTR_3g052450 57.407 108 46 0 7 114 36 143 2.90e-43 152
MsG0580028989.01.T01 MTR_1g073170 55.455 110 49 0 5 114 14 123 6.02e-43 145
MsG0580028989.01.T01 MTR_3g052430 59.048 105 43 0 10 114 40 144 7.27e-43 151
MsG0580028989.01.T01 MTR_5g078800 61.321 106 41 0 11 116 7 112 2.40e-42 144
MsG0580028989.01.T01 MTR_1g045610 56.364 110 48 0 5 114 15 124 2.48e-42 144
MsG0580028989.01.T01 MTR_7g017260 60.185 108 41 1 11 116 25 132 3.52e-42 144
MsG0580028989.01.T01 MTR_6g006030 56.034 116 49 1 2 115 3 118 3.74e-42 142
MsG0580028989.01.T01 MTR_0247s0040 60.748 107 42 0 6 112 2 108 4.11e-42 140
MsG0580028989.01.T01 MTR_0001s0360 60.377 106 42 0 11 116 7 112 4.52e-42 143
MsG0580028989.01.T01 MTR_7g035075 56.034 116 49 1 2 115 3 118 4.82e-42 141
MsG0580028989.01.T01 MTR_4g097570 58.716 109 43 2 2 108 3 111 5.96e-42 144
MsG0580028989.01.T01 MTR_5g078910 58.879 107 44 0 10 116 6 112 6.60e-42 144
MsG0580028989.01.T01 MTR_8g060940 62.376 101 38 0 11 111 7 107 7.72e-42 142
MsG0580028989.01.T01 MTR_4g128670 56.881 109 46 1 2 109 3 111 1.03e-41 144
MsG0580028989.01.T01 MTR_3g011610 57.692 104 44 0 11 114 37 140 2.87e-41 147
MsG0580028989.01.T01 MTR_5g078930 62.745 102 38 0 13 114 11 112 3.38e-41 139
MsG0580028989.01.T01 MTR_0193s0090 56.034 116 50 1 11 126 7 121 9.23e-41 138
MsG0580028989.01.T01 MTR_5g078860 59.434 106 43 0 11 116 7 112 1.33e-40 140
MsG0580028989.01.T01 MTR_5g078950 60.784 102 40 0 11 112 7 108 2.11e-40 139
MsG0580028989.01.T01 MTR_1g110460 49.587 121 61 0 7 127 22 142 3.91e-40 139
MsG0580028989.01.T01 MTR_1g086510 49.231 130 63 1 1 127 8 137 4.62e-40 138
MsG0580028989.01.T01 MTR_1g086530 49.573 117 59 0 11 127 33 149 7.74e-40 138
MsG0580028989.01.T01 MTR_8g042410 56.731 104 45 0 11 114 37 140 1.86e-39 142
MsG0580028989.01.T01 MTR_1g062940 43.195 169 84 5 10 173 5 166 2.54e-39 135
MsG0580028989.01.T01 MTR_2g096380 52.336 107 51 0 8 114 3 109 6.57e-38 132
MsG0580028989.01.T01 MTR_4g063100 55.882 102 45 0 13 114 9 110 7.76e-38 132
MsG0580028989.01.T01 MTR_3g045430 47.244 127 66 1 1 126 2 128 2.92e-36 129
MsG0580028989.01.T01 MTR_7g111290 69.048 84 26 0 43 126 2 85 5.64e-36 129
MsG0580028989.01.T01 MTR_1g021230 51.923 104 50 0 11 114 57 160 1.18e-35 130
MsG0580028989.01.T01 MTR_1g083630 47.656 128 59 2 7 127 8 134 2.76e-35 131
MsG0580028989.01.T01 MTR_2g033170 49.587 121 61 0 7 127 20 140 5.95e-35 126
MsG0580028989.01.T01 MTR_5g488170 35.266 207 103 7 10 194 11 208 6.06e-35 124
MsG0580028989.01.T01 MTR_2g088170 55.769 104 46 0 11 114 29 132 6.14e-35 129
MsG0580028989.01.T01 MTR_5g088640 36.408 206 96 8 13 194 14 208 7.36e-35 125
MsG0580028989.01.T01 MTR_5g088080 35.885 209 99 8 10 194 11 208 8.05e-35 124
MsG0580028989.01.T01 MTR_5g088150 35.885 209 99 8 10 194 11 208 8.05e-35 124
MsG0580028989.01.T01 MTR_5g488210 35.885 209 99 8 10 194 11 208 8.05e-35 124
MsG0580028989.01.T01 MTR_5g007300 59.770 87 35 0 1 87 54 140 2.70e-33 117
MsG0580028989.01.T01 MTR_4g123040 47.934 121 63 0 7 127 20 140 2.82e-33 122
MsG0580028989.01.T01 MTR_5g062790 47.748 111 56 2 13 122 11 120 5.54e-33 120
MsG0580028989.01.T01 MTR_6g055910 62.162 74 28 0 44 117 18 91 6.62e-31 114
MsG0580028989.01.T01 MTR_8g006470 48.148 108 55 1 7 113 6 113 1.03e-30 114
MsG0580028989.01.T01 MTR_5g088610 45.946 111 58 2 13 122 11 120 6.00e-29 111
MsG0580028989.01.T01 MTR_5g070020 48.544 103 50 2 13 114 122 222 8.27e-29 110
MsG0580028989.01.T01 MTR_4g029540 49.038 104 52 1 11 113 10 113 1.21e-28 109
MsG0580028989.01.T01 MTR_5g049190 45.946 111 59 1 7 117 13 122 1.42e-28 107
MsG0580028989.01.T01 MTR_4g063100 61.644 73 28 0 42 114 9 81 2.34e-28 107
MsG0580028989.01.T01 MTR_5g016510 47.706 109 56 1 13 121 5 112 3.20e-28 108
MsG0580028989.01.T01 MTR_4g019370 46.610 118 61 2 13 130 38 153 9.89e-28 107
MsG0580028989.01.T01 MTR_3g463400 47.573 103 51 2 13 114 133 233 1.12e-27 109
MsG0580028989.01.T01 MTR_3g077650 47.059 119 58 3 2 117 168 284 1.23e-27 108
MsG0580028989.01.T01 MTR_2g096380 58.904 73 30 0 42 114 18 90 1.39e-26 102
MsG0580028989.01.T01 MTR_4g094982 47.059 102 53 1 13 114 5 105 3.60e-26 102
MsG0580028989.01.T01 MTR_4g128190 39.496 119 58 2 11 128 11 116 5.63e-26 100
MsG0580028989.01.T01 MTR_3g101290 49.020 102 51 1 13 114 37 137 1.05e-25 100
MsG0580028989.01.T01 MTR_6g074860 46.364 110 53 3 13 118 4 111 1.63e-25 99.8
MsG0580028989.01.T01 MTR_3g110028 44.660 103 56 1 13 115 85 186 4.39e-25 102
MsG0580028989.01.T01 MTR_4g105660 45.370 108 56 2 11 117 178 283 4.81e-25 101
MsG0580028989.01.T01 MTR_1g057980 34.667 150 96 2 10 159 77 224 5.53e-25 99.8
MsG0580028989.01.T01 MTR_7g037260 46.296 108 57 1 10 117 142 248 1.16e-24 99.8
MsG0580028989.01.T01 MTR_7g061330 44.660 103 56 1 13 115 113 214 1.56e-24 101
MsG0580028989.01.T01 MTR_7g461410 44.660 103 56 1 13 115 113 214 1.56e-24 101
MsG0580028989.01.T01 MTR_7g061330 44.660 103 56 1 13 115 77 178 2.55e-24 100
MsG0580028989.01.T01 MTR_7g061330 32.000 100 66 2 13 111 25 123 1.02e-11 63.9
MsG0580028989.01.T01 MTR_6g015455 47.059 102 53 1 13 114 5 105 3.19e-24 100
MsG0580028989.01.T01 MTR_1g026870 38.514 148 76 4 13 152 85 225 4.37e-24 100
MsG0580028989.01.T01 MTR_4g088015 44.231 104 57 1 10 113 218 320 4.77e-24 99.0
MsG0580028989.01.T01 MTR_1g085880 45.455 99 53 1 16 113 17 115 1.17e-23 94.0
MsG0580028989.01.T01 MTR_7g451170 43.137 102 57 1 13 114 191 291 1.30e-23 97.4
MsG0580028989.01.T01 MTR_5g082910 46.465 99 52 1 13 111 19 116 1.32e-23 95.9
MsG0580028989.01.T01 MTR_7g035350 44.660 103 56 1 10 112 222 323 1.42e-23 97.8
MsG0580028989.01.T01 MTR_4g082040 45.192 104 54 2 13 115 105 206 3.41e-23 96.7
MsG0580028989.01.T01 MTR_5g041570 45.192 104 54 2 13 115 134 235 4.38e-23 96.3
MsG0580028989.01.T01 MTR_6g027340 36.527 167 81 4 13 156 16 180 5.83e-23 92.4
MsG0580028989.01.T01 MTR_1g085770 44.762 105 56 2 11 113 11 115 8.52e-23 94.0
MsG0580028989.01.T01 MTR_0023s0210 49.351 77 39 0 11 87 7 83 8.37e-22 85.9
MsG0580028989.01.T01 MTR_6g027360 45.455 99 51 2 11 108 76 172 8.71e-22 91.3
MsG0580028989.01.T01 MTR_3g089045 45.872 109 56 2 7 114 10 116 2.02e-21 90.1
MsG0580028989.01.T01 MTR_7g037130 42.718 103 58 1 10 112 142 243 1.59e-20 88.6
MsG0580028989.01.T01 MTR_7g450950 38.532 109 66 1 10 118 154 261 1.65e-20 88.2
MsG0580028989.01.T01 MTR_5g010650 41.667 96 55 1 13 108 110 204 2.23e-20 89.0
MsG0580028989.01.T01 MTR_6g027370 36.620 142 86 3 13 153 99 237 7.80e-20 86.7
MsG0580028989.01.T01 MTR_7g086960 41.748 103 59 1 12 114 88 189 4.16e-19 84.7
MsG0580028989.01.T01 MTR_7g061550 31.544 149 82 3 16 144 10 158 1.56e-16 77.4
MsG0580028989.01.T01 MTR_2g088730 68.293 41 13 0 69 109 34 74 1.27e-15 69.7
MsG0580028989.01.T01 MTR_5g038910 35.000 100 64 1 15 114 28 126 3.86e-15 73.9
MsG0580028989.01.T01 MTR_5g038910 36.842 95 59 1 15 109 28 121 5.84e-15 73.2
MsG0580028989.01.T01 MTR_8g017480 57.447 47 20 0 5 51 6 52 6.04e-15 67.0
MsG0580028989.01.T01 MTR_6g055910 54.000 50 23 0 68 117 1 50 6.25e-15 71.2
MsG0580028989.01.T01 MTR_8g468380 35.714 112 70 2 15 126 24 133 7.10e-15 73.2
MsG0580028989.01.T01 MTR_4g063100 61.905 42 16 0 73 114 5 46 2.97e-13 66.2
MsG0580028989.01.T01 MTR_2g096380 59.524 42 17 0 73 114 5 46 1.71e-12 63.5
MsG0580028989.01.T01 MTR_4g046737 56.098 41 18 0 69 109 28 68 2.56e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028989.01.T01 AT1G22640 73.016 126 34 0 2 127 3 128 4.90e-71 217
MsG0580028989.01.T01 AT4G38620 50.237 211 79 2 2 192 3 207 2.95e-70 216
MsG0580028989.01.T01 AT2G16720 48.661 224 102 5 2 216 3 222 3.02e-70 215
MsG0580028989.01.T01 AT4G09460 51.185 211 89 4 2 198 3 213 1.49e-69 213
MsG0580028989.01.T01 AT4G34990 70.400 125 37 0 2 126 3 127 2.83e-67 208
MsG0580028989.01.T01 AT1G35515 49.074 216 79 5 2 198 3 206 4.18e-66 203
MsG0580028989.01.T01 AT4G28110 66.129 124 42 0 2 125 3 126 1.06e-63 199
MsG0580028989.01.T01 AT4G21440 60.274 146 51 1 2 147 3 141 1.33e-63 201
MsG0580028989.01.T01 AT5G16770 66.400 125 42 0 2 126 3 127 9.14e-63 198
MsG0580028989.01.T01 AT5G16770 66.400 125 42 0 2 126 3 127 9.14e-63 198
MsG0580028989.01.T01 AT4G05100 67.200 125 40 1 2 125 3 127 1.61e-62 197
MsG0580028989.01.T01 AT5G16770 66.400 125 42 0 2 126 3 127 2.20e-62 197
MsG0580028989.01.T01 AT5G16770 66.400 125 42 0 2 126 3 127 2.20e-62 197
MsG0580028989.01.T01 AT3G02940 67.200 125 41 0 2 126 3 127 6.55e-62 196
MsG0580028989.01.T01 AT3G02940 67.200 125 41 0 2 126 3 127 1.10e-61 195
MsG0580028989.01.T01 AT3G02940 67.200 125 41 0 2 126 3 127 1.10e-61 195
MsG0580028989.01.T01 AT5G15310 67.200 125 41 0 2 126 3 127 1.13e-61 193
MsG0580028989.01.T01 AT5G26660 67.200 125 41 0 2 126 3 127 1.91e-61 196
MsG0580028989.01.T01 AT5G15310 67.200 125 41 0 2 126 3 127 2.21e-61 194
MsG0580028989.01.T01 AT5G15310 67.200 125 41 0 2 126 3 127 3.02e-61 194
MsG0580028989.01.T01 AT1G57560 57.233 159 56 2 2 160 3 149 5.04e-61 193
MsG0580028989.01.T01 AT1G57560 65.600 125 43 0 2 126 3 127 1.25e-60 191
MsG0580028989.01.T01 AT3G01140 67.200 125 41 0 2 126 3 127 1.34e-60 193
MsG0580028989.01.T01 AT1G09540 65.600 125 43 0 2 126 3 127 1.27e-59 191
MsG0580028989.01.T01 AT4G01680 65.873 126 43 0 2 127 3 128 1.77e-59 187
MsG0580028989.01.T01 AT4G12350 56.410 156 65 2 2 156 3 156 2.04e-59 188
MsG0580028989.01.T01 AT3G01140 67.480 123 40 0 4 126 48 170 3.02e-59 191
MsG0580028989.01.T01 AT1G74080 56.688 157 65 1 1 154 2 158 4.25e-59 189
MsG0580028989.01.T01 AT4G01680 65.873 126 43 0 2 127 3 128 8.99e-59 188
MsG0580028989.01.T01 AT3G13540 51.765 170 73 3 4 167 16 182 1.02e-58 185
MsG0580028989.01.T01 AT4G22680 64.000 125 45 0 2 126 3 127 1.43e-58 186
MsG0580028989.01.T01 AT5G60890 63.492 126 46 0 1 126 2 127 4.84e-58 185
MsG0580028989.01.T01 AT1G34670 62.400 125 47 0 2 126 3 127 1.09e-57 186
MsG0580028989.01.T01 AT3G61250 61.600 125 48 0 2 126 3 127 1.17e-57 184
MsG0580028989.01.T01 AT5G61420 48.087 183 90 1 2 184 3 180 3.37e-57 185
MsG0580028989.01.T01 AT1G18570 65.354 127 43 1 1 126 2 128 3.55e-57 184
MsG0580028989.01.T01 AT4G17785 63.492 126 45 1 2 126 3 128 8.13e-57 184
MsG0580028989.01.T01 AT4G17785 63.492 126 45 1 2 126 3 128 9.33e-57 183
MsG0580028989.01.T01 AT5G62320 60.606 132 45 1 2 126 4 135 9.40e-57 180
MsG0580028989.01.T01 AT5G10280 59.200 125 51 0 2 126 3 127 9.71e-57 183
MsG0580028989.01.T01 AT5G07690 64.000 125 45 0 2 126 3 127 1.13e-56 183
MsG0580028989.01.T01 AT5G65230 60.000 125 50 0 2 126 3 127 1.76e-56 182
MsG0580028989.01.T01 AT1G66230 61.600 125 48 0 2 126 3 127 5.80e-56 179
MsG0580028989.01.T01 AT5G54230 52.381 168 76 2 11 178 12 175 2.52e-55 179
MsG0580028989.01.T01 AT4G01680 60.145 138 43 1 2 127 3 140 3.10e-55 179
MsG0580028989.01.T01 AT5G07700 60.448 134 52 1 2 134 3 136 6.06e-55 178
MsG0580028989.01.T01 AT5G07700 60.448 134 52 1 2 134 3 136 6.06e-55 178
MsG0580028989.01.T01 AT5G16600 62.400 125 47 0 2 126 3 127 7.54e-55 178
MsG0580028989.01.T01 AT3G12720 60.163 123 49 0 5 127 16 138 1.53e-54 176
MsG0580028989.01.T01 AT5G56110 62.400 125 47 0 2 126 3 127 1.80e-54 177
MsG0580028989.01.T01 AT3G13890 66.071 112 38 0 5 116 6 117 8.45e-54 176
MsG0580028989.01.T01 AT5G49330 59.843 127 50 1 2 127 3 129 2.89e-52 172
MsG0580028989.01.T01 AT2G47460 66.667 114 38 0 2 115 3 116 3.58e-52 172
MsG0580028989.01.T01 AT1G63910 54.861 144 58 2 5 148 6 142 4.47e-52 172
MsG0580028989.01.T01 AT3G62610 66.667 114 38 0 2 115 3 116 1.07e-51 170
MsG0580028989.01.T01 AT1G74430 60.800 125 49 0 2 126 3 127 3.84e-51 167
MsG0580028989.01.T01 AT5G35550 67.273 110 36 0 8 117 11 120 6.49e-51 166
MsG0580028989.01.T01 AT1G06180 63.158 114 42 0 2 115 3 116 1.25e-50 164
MsG0580028989.01.T01 AT3G13890 61.157 121 38 1 5 116 6 126 1.42e-50 168
MsG0580028989.01.T01 AT3G28470 60.000 125 50 0 2 126 3 127 4.93e-50 165
MsG0580028989.01.T01 AT5G14340 56.800 125 54 0 2 126 15 139 9.41e-50 163
MsG0580028989.01.T01 AT3G23250 58.772 114 47 0 2 115 3 116 1.34e-49 163
MsG0580028989.01.T01 AT1G56160 61.739 115 44 0 2 116 5 119 1.94e-49 163
MsG0580028989.01.T01 AT5G12870 63.889 108 39 0 11 118 18 125 2.13e-49 162
MsG0580028989.01.T01 AT3G47600 61.538 117 45 0 2 118 3 119 3.65e-49 163
MsG0580028989.01.T01 AT2G31180 43.229 192 95 2 2 179 3 194 4.73e-49 160
MsG0580028989.01.T01 AT1G16490 60.526 114 45 0 2 115 5 118 5.10e-49 161
MsG0580028989.01.T01 AT1G74650 61.538 117 45 0 2 118 3 119 6.04e-49 163
MsG0580028989.01.T01 AT5G14750 65.049 103 36 0 13 115 18 120 8.13e-49 159
MsG0580028989.01.T01 AT1G79180 42.453 212 114 3 2 205 5 216 9.47e-49 161
MsG0580028989.01.T01 AT5G40330 44.565 184 95 4 13 195 14 191 1.94e-48 158
MsG0580028989.01.T01 AT3G28910 58.678 121 50 0 1 121 2 122 7.43e-48 160
MsG0580028989.01.T01 AT5G62470 59.829 117 47 0 2 118 3 119 2.52e-47 159
MsG0580028989.01.T01 AT1G08810 60.833 120 47 0 2 121 3 122 2.72e-47 157
MsG0580028989.01.T01 AT5G23000 58.621 116 47 1 2 116 3 118 1.84e-46 156
MsG0580028989.01.T01 AT3G08500 62.385 109 41 0 7 115 26 134 1.86e-46 157
MsG0580028989.01.T01 AT2G36890 54.331 127 57 1 2 127 3 129 2.88e-46 155
MsG0580028989.01.T01 AT3G27920 42.781 187 86 3 2 173 5 185 3.29e-46 153
MsG0580028989.01.T01 AT2G36890 54.331 127 57 1 2 127 44 170 4.12e-46 155
MsG0580028989.01.T01 AT5G65790 56.897 116 49 1 2 116 3 118 4.96e-46 156
MsG0580028989.01.T01 AT3G49690 57.759 116 48 1 2 116 3 118 5.55e-46 154
MsG0580028989.01.T01 AT3G12820 56.034 116 51 0 2 117 5 120 9.96e-46 152
MsG0580028989.01.T01 AT5G57620 56.897 116 49 1 2 116 3 118 1.09e-45 154
MsG0580028989.01.T01 AT5G62470 59.829 117 46 1 2 118 3 118 1.16e-45 155
MsG0580028989.01.T01 AT5G52600 61.682 107 41 0 8 114 9 115 2.14e-45 150
MsG0580028989.01.T01 AT1G18710 55.200 125 56 0 2 126 3 127 7.60e-45 150
MsG0580028989.01.T01 AT3G01530 55.932 118 52 0 11 128 25 142 3.87e-44 147
MsG0580028989.01.T01 AT5G06100 59.259 108 44 0 7 114 28 135 8.30e-44 152
MsG0580028989.01.T01 AT5G06100 59.259 108 44 0 7 114 28 135 3.51e-43 152
MsG0580028989.01.T01 AT5G06100 59.259 108 44 0 7 114 28 135 3.51e-43 152
MsG0580028989.01.T01 AT5G06100 59.259 108 44 0 7 114 28 135 3.51e-43 152
MsG0580028989.01.T01 AT5G06100 59.259 108 44 0 7 114 28 135 3.51e-43 152
MsG0580028989.01.T01 AT3G24310 59.813 107 43 0 8 114 15 121 4.29e-43 146
MsG0580028989.01.T01 AT4G37780 54.310 116 52 1 2 116 3 118 1.09e-42 146
MsG0580028989.01.T01 AT5G40350 51.562 128 62 0 11 138 17 144 1.58e-42 143
MsG0580028989.01.T01 AT4G13480 59.813 107 43 0 8 114 3 109 3.87e-42 143
MsG0580028989.01.T01 AT3G11440 57.692 104 44 0 11 114 41 144 5.96e-42 147
MsG0580028989.01.T01 AT1G79180 36.735 245 114 4 2 205 5 249 7.86e-42 144
MsG0580028989.01.T01 AT3G48920 46.923 130 64 1 8 137 15 139 2.57e-41 141
MsG0580028989.01.T01 AT3G11440 57.692 104 44 0 11 114 41 144 2.82e-41 147
MsG0580028989.01.T01 AT3G11440 57.692 104 44 0 11 114 41 144 2.82e-41 147
MsG0580028989.01.T01 AT3G11440 57.692 104 44 0 11 114 41 144 2.82e-41 147
MsG0580028989.01.T01 AT1G48000 53.390 118 53 1 11 126 32 149 3.87e-41 140
MsG0580028989.01.T01 AT2G26960 53.982 113 51 1 8 120 17 128 4.36e-41 145
MsG0580028989.01.T01 AT5G55020 56.364 110 47 1 11 120 26 134 4.72e-41 146
MsG0580028989.01.T01 AT5G26660 73.494 83 22 0 44 126 14 96 5.26e-41 142
MsG0580028989.01.T01 AT1G66370 60.577 104 41 0 11 114 8 111 6.81e-41 140
MsG0580028989.01.T01 AT4G25560 54.128 109 50 0 9 117 8 116 1.28e-40 140
MsG0580028989.01.T01 AT2G32460 57.692 104 44 0 11 114 6 109 1.54e-40 144
MsG0580028989.01.T01 AT2G32460 57.692 104 44 0 11 114 18 121 1.71e-40 144
MsG0580028989.01.T01 AT3G27810 56.190 105 46 0 11 115 20 124 3.33e-40 137
MsG0580028989.01.T01 AT3G53200 35.931 231 124 6 8 216 6 234 1.16e-39 136
MsG0580028989.01.T01 AT2G47190 47.458 118 62 0 7 124 16 133 1.21e-39 137
MsG0580028989.01.T01 AT5G52260 55.455 110 49 0 8 117 9 118 1.35e-39 137
MsG0580028989.01.T01 AT1G25340 52.174 115 55 0 13 127 20 134 3.23e-39 136
MsG0580028989.01.T01 AT4G26930 55.340 103 46 0 11 113 19 121 7.30e-39 138
MsG0580028989.01.T01 AT1G68320 48.438 128 66 0 9 136 17 144 1.21e-38 135
MsG0580028989.01.T01 AT3G30210 56.436 101 44 0 13 113 29 129 1.78e-38 134
MsG0580028989.01.T01 AT1G66380 62.264 106 40 0 9 114 6 111 2.61e-38 130
MsG0580028989.01.T01 AT5G59780 52.336 107 51 0 8 114 5 111 9.16e-38 131
MsG0580028989.01.T01 AT3G46130 53.271 107 50 0 8 114 6 112 3.44e-37 130
MsG0580028989.01.T01 AT1G56650 62.500 104 39 0 11 114 8 111 4.53e-37 130
MsG0580028989.01.T01 AT1G71030 52.991 117 47 2 40 156 11 119 1.14e-36 127
MsG0580028989.01.T01 AT1G71030 55.140 107 42 1 50 156 5 105 2.01e-36 126
MsG0580028989.01.T01 AT3G06490 49.587 121 61 0 7 127 15 135 3.84e-36 129
MsG0580028989.01.T01 AT1G66390 62.500 104 39 0 11 114 8 111 4.36e-36 127
MsG0580028989.01.T01 AT5G49620 42.484 153 76 1 7 147 22 174 2.36e-35 127
MsG0580028989.01.T01 AT1G22640 73.239 71 19 0 57 127 1 71 3.52e-35 124
MsG0580028989.01.T01 AT5G14750 73.913 69 18 0 47 115 18 86 1.06e-34 121
MsG0580028989.01.T01 AT1G25340 49.565 115 53 1 13 127 20 129 1.22e-34 124
MsG0580028989.01.T01 AT5G35550 75.676 74 18 0 44 117 50 123 1.88e-34 123
MsG0580028989.01.T01 AT1G25340 49.565 115 53 1 13 127 20 129 1.90e-34 124
MsG0580028989.01.T01 AT3G60460 50.877 114 55 1 1 113 1 114 5.76e-33 120
MsG0580028989.01.T01 AT5G49620 38.922 167 76 2 7 147 22 188 1.31e-31 117
MsG0580028989.01.T01 AT3G47600 68.000 75 24 0 44 118 39 113 2.89e-31 117
MsG0580028989.01.T01 AT2G26950 44.545 110 59 1 8 117 13 120 5.71e-31 117
MsG0580028989.01.T01 AT3G53200 36.923 195 99 6 44 216 9 201 9.62e-31 112
MsG0580028989.01.T01 AT3G12820 63.380 71 26 0 47 117 2 72 1.37e-29 109
MsG0580028989.01.T01 AT1G66380 70.130 77 23 0 38 114 2 78 7.50e-29 104
MsG0580028989.01.T01 AT5G40350 51.579 95 46 0 44 138 5 99 1.21e-28 106
MsG0580028989.01.T01 AT3G46130 61.644 73 28 0 42 114 8 80 6.47e-28 105
MsG0580028989.01.T01 AT3G27785 45.690 116 60 2 1 114 175 289 7.64e-28 109
MsG0580028989.01.T01 AT1G18960 42.029 138 65 6 1 136 1 125 1.44e-27 106
MsG0580028989.01.T01 AT5G59780 63.380 71 26 0 44 114 20 90 1.69e-27 104
MsG0580028989.01.T01 AT3G46130 63.380 71 26 0 44 114 20 90 2.00e-27 104
MsG0580028989.01.T01 AT5G58850 47.170 106 53 2 10 114 102 205 3.06e-27 107
MsG0580028989.01.T01 AT3G27810 59.722 72 29 0 44 115 4 75 3.95e-27 102
MsG0580028989.01.T01 AT5G11050 48.113 106 52 2 10 114 102 205 5.04e-27 107
MsG0580028989.01.T01 AT4G18770 43.636 110 61 1 8 117 212 320 1.35e-26 105
MsG0580028989.01.T01 AT3G09230 48.113 106 54 1 13 118 55 159 2.50e-26 104
MsG0580028989.01.T01 AT1G69560 45.872 109 56 2 8 115 118 224 4.98e-26 103
MsG0580028989.01.T01 AT1G69560 45.872 109 56 2 8 115 102 208 5.05e-26 103
MsG0580028989.01.T01 AT5G14750 69.492 59 18 0 57 115 1 59 5.34e-26 98.6
MsG0580028989.01.T01 AT5G14750 69.492 59 18 0 57 115 1 59 5.34e-26 98.6
MsG0580028989.01.T01 AT5G40360 33.000 200 109 5 8 199 153 335 5.70e-26 103
MsG0580028989.01.T01 AT4G37260 49.020 102 51 1 13 114 13 113 7.12e-26 102
MsG0580028989.01.T01 AT2G23290 50.000 102 50 1 13 114 13 113 3.56e-25 100
MsG0580028989.01.T01 AT3G50060 46.078 102 54 1 13 114 6 106 6.39e-25 99.8
MsG0580028989.01.T01 AT2G39880 39.161 143 81 3 13 151 50 190 1.14e-24 100
MsG0580028989.01.T01 AT3G55730 48.598 107 52 2 13 118 56 160 1.61e-24 100
MsG0580028989.01.T01 AT1G26780 45.283 106 55 2 11 115 96 199 2.46e-24 97.8
MsG0580028989.01.T01 AT4G32730 43.689 103 57 1 13 115 87 188 2.58e-24 100
MsG0580028989.01.T01 AT4G32730 43.689 103 57 1 13 115 87 188 2.58e-24 100
MsG0580028989.01.T01 AT4G32730 43.689 103 57 1 13 115 87 188 2.58e-24 100
MsG0580028989.01.T01 AT4G32730 43.689 103 57 1 13 115 87 188 2.58e-24 100
MsG0580028989.01.T01 AT5G02320 42.718 103 58 1 13 115 127 228 2.72e-24 100
MsG0580028989.01.T01 AT5G02320 42.718 103 58 1 13 115 127 228 2.72e-24 100
MsG0580028989.01.T01 AT4G32730 43.689 103 57 1 13 115 87 188 3.17e-24 100
MsG0580028989.01.T01 AT5G67300 33.163 196 100 6 13 200 6 178 3.47e-24 97.8
MsG0580028989.01.T01 AT5G11510 42.718 103 58 1 13 115 81 182 4.02e-24 100
MsG0580028989.01.T01 AT5G11510 42.718 103 58 1 13 115 81 182 4.02e-24 100
MsG0580028989.01.T01 AT5G11510 42.718 103 58 1 13 115 81 182 4.02e-24 100
MsG0580028989.01.T01 AT5G02320 42.718 103 58 1 13 115 67 168 4.14e-24 99.8
MsG0580028989.01.T01 AT1G26780 45.283 106 55 2 11 115 96 199 4.97e-24 98.2
MsG0580028989.01.T01 AT5G11510 42.718 103 58 1 13 115 81 182 5.06e-24 99.8
MsG0580028989.01.T01 AT5G11510 42.718 103 58 1 13 115 81 182 5.97e-24 99.8
MsG0580028989.01.T01 AT3G23250 62.712 59 22 0 57 115 1 59 1.03e-23 94.7
MsG0580028989.01.T01 AT3G09370 42.157 102 58 1 13 114 135 235 3.35e-23 97.1
MsG0580028989.01.T01 AT3G09370 42.157 102 58 1 13 114 130 230 3.39e-23 97.1
MsG0580028989.01.T01 AT2G25230 39.286 112 67 1 8 119 21 131 5.01e-23 93.2
MsG0580028989.01.T01 AT3G09370 42.157 102 58 1 13 114 143 243 5.69e-23 96.7
MsG0580028989.01.T01 AT1G17950 44.231 104 55 2 12 114 4 105 5.74e-23 93.2
MsG0580028989.01.T01 AT3G29020 35.172 145 83 3 12 146 64 207 1.76e-22 91.7
MsG0580028989.01.T01 AT1G66380 56.627 83 36 0 9 91 6 88 2.65e-22 87.8
MsG0580028989.01.T01 AT3G29020 40.385 104 61 1 12 115 66 168 3.37e-22 92.4
MsG0580028989.01.T01 AT1G73410 45.192 104 54 2 12 114 5 106 1.88e-21 89.4
MsG0580028989.01.T01 AT4G33450 42.105 114 58 3 2 114 13 119 2.13e-21 89.4
MsG0580028989.01.T01 AT1G73410 45.192 104 54 2 12 114 5 106 3.86e-21 87.4
MsG0580028989.01.T01 AT5G17800 42.718 103 58 1 12 114 92 193 9.71e-21 88.6
MsG0580028989.01.T01 AT1G22640 61.667 60 17 1 68 127 3 56 1.15e-18 80.5
MsG0580028989.01.T01 AT5G40430 35.714 112 70 2 8 119 49 158 1.79e-18 81.6
MsG0580028989.01.T01 AT4G00540 37.500 112 66 2 10 118 100 210 2.02e-18 83.2
MsG0580028989.01.T01 AT4G00540 37.500 112 66 2 10 118 98 208 3.26e-18 82.8
MsG0580028989.01.T01 AT5G39700 39.000 100 60 1 14 113 57 155 2.99e-16 74.3
MsG0580028989.01.T01 AT5G61420 59.574 47 19 0 80 126 2 48 3.88e-15 72.8
MsG0580028989.01.T01 AT1G14350 36.000 100 63 1 15 114 27 125 5.27e-15 73.6
MsG0580028989.01.T01 AT1G14350 36.000 100 63 1 15 114 27 125 5.27e-15 73.6
MsG0580028989.01.T01 AT2G37630 37.895 95 57 1 16 108 7 101 5.43e-15 73.2
MsG0580028989.01.T01 AT4G28110 65.000 40 14 0 87 126 4 43 2.03e-14 69.3
MsG0580028989.01.T01 AT2G02820 36.000 100 63 1 15 114 32 130 2.35e-14 71.6
MsG0580028989.01.T01 AT1G74650 65.116 43 15 0 76 118 1 43 2.70e-14 70.1
MsG0580028989.01.T01 AT2G02820 37.895 95 58 1 15 109 32 125 2.87e-14 70.9
MsG0580028989.01.T01 AT2G02820 37.895 95 58 1 15 109 32 125 2.94e-14 71.2
MsG0580028989.01.T01 AT4G25560 52.000 50 24 0 68 117 1 50 3.83e-14 68.9
MsG0580028989.01.T01 AT5G15310 61.364 44 17 0 83 126 5 48 6.65e-14 68.9
MsG0580028989.01.T01 AT5G59780 64.286 42 15 0 73 114 5 46 1.02e-13 67.0
MsG0580028989.01.T01 AT3G46130 64.286 42 15 0 73 114 5 46 1.22e-13 67.4
MsG0580028989.01.T01 AT3G28910 57.143 49 21 0 76 124 1 49 1.51e-13 67.8
MsG0580028989.01.T01 AT4G01060 53.846 39 18 0 69 107 32 70 9.06e-12 59.3
MsG0580028989.01.T01 AT4G01060 53.846 39 18 0 69 107 35 73 9.75e-12 59.3
MsG0580028989.01.T01 AT4G01060 53.846 39 18 0 69 107 33 71 1.27e-11 58.9
MsG0580028989.01.T01 AT2G46410 43.860 57 25 1 70 126 39 88 3.96e-11 58.2
MsG0580028989.01.T01 AT1G01380 56.410 39 17 0 69 107 34 72 4.54e-11 57.8

Find 53 sgRNAs with CRISPR-Local

Find 100 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTTGGATCATTATTAA+TGG 0.217277 5:+90027617 None:intergenic
AAGATTCCACGTTTGATATC+TGG 0.258514 5:+90028591 None:intergenic
TTAGGTATAACAATCCTATT+TGG 0.261279 5:+90027528 None:intergenic
ATTGTTATTCTCTTTATTCA+TGG 0.280906 5:+90027668 None:intergenic
ATTGATGTAGTATCTTTCTT+TGG 0.291687 5:+90027603 None:intergenic
TTGCTTTACCTTCTCCAAAT+AGG 0.293572 5:-90027542 MsG0580028989.01.T01:CDS
TTCTTTGGATCATTATTAAT+GGG 0.329210 5:+90027618 None:intergenic
TTGTGTAGTTTGTGATTGTT+TGG 0.338193 5:+90027744 None:intergenic
ATTGATTATATACAAGTTCA+TGG 0.341918 5:-90028956 MsG0580028989.01.T01:CDS
ATATCCATATCCCTAGTCTT+AGG 0.363929 5:+90027495 None:intergenic
CACCTCATTATCTGTACGTC+CGG 0.373242 5:+90027821 None:intergenic
GTCTTAGGAGACCCACAATT+AGG 0.397706 5:+90027510 None:intergenic
GTCTCCTAAGACTAGGGATA+TGG 0.399312 5:-90027499 MsG0580028989.01.T01:CDS
AGTTCATGGTGAAGGATGTT+GGG 0.408944 5:-90028942 MsG0580028989.01.T01:CDS
GGGTGCATCACACGACTTGA+TGG 0.428600 5:+90027638 None:intergenic
GGCTCCATTCCCAAGGCTGC+TGG 0.440946 5:-90028920 MsG0580028989.01.T01:intron
GAACTAATTACCAGCAGCCT+TGG 0.441808 5:+90028910 None:intergenic
CTCATAGCTGGAAGGTTGCC+CGG 0.450506 5:-90027840 MsG0580028989.01.T01:CDS
ATTAGGTGGGCACTCATAGC+TGG 0.451246 5:-90027852 MsG0580028989.01.T01:intron
ATCGTTGTGGCAAAAGTTGT+AGG 0.454949 5:-90028638 MsG0580028989.01.T01:CDS
TTGTGGGTCTCCTAAGACTA+GGG 0.463012 5:-90027505 MsG0580028989.01.T01:CDS
ATCAAACTCCATGCCCTCCT+TGG 0.465369 5:-90028543 MsG0580028989.01.T01:CDS
GCAAAAGTTGTAGGCTAAGA+TGG 0.469351 5:-90028629 MsG0580028989.01.T01:CDS
ACCTATTGCCAAGGAGGGCA+TGG 0.478073 5:+90028535 None:intergenic
AACTAATTACCAGCAGCCTT+GGG 0.489756 5:+90028911 None:intergenic
TCCATGCCCTCCTTGGCAAT+AGG 0.493745 5:-90028536 MsG0580028989.01.T01:intron
AGGATTGTTATACCTAATTG+TGG 0.497280 5:-90027522 MsG0580028989.01.T01:CDS
GGATTGTTATACCTAATTGT+GGG 0.506270 5:-90027521 MsG0580028989.01.T01:CDS
AAGTTCATGGTGAAGGATGT+TGG 0.511367 5:-90028943 MsG0580028989.01.T01:CDS
AGTCCTCATGTTTCTACTGT+GGG 0.525990 5:-90027711 MsG0580028989.01.T01:CDS
TAGTCCTCATGTTTCTACTG+TGG 0.527361 5:-90027712 MsG0580028989.01.T01:CDS
ATTACCAGCAGCCTTGGGAA+TGG 0.546588 5:+90028916 None:intergenic
AAAACATCAACAAAGGTGCT+TGG 0.548391 5:-90029003 MsG0580028989.01.T01:CDS
ACCTCATTATCTGTACGTCC+GGG 0.555070 5:+90027822 None:intergenic
TATATACAAGTTCATGGTGA+AGG 0.571901 5:-90028950 MsG0580028989.01.T01:CDS
TGATTAGGGTTGCATCGTTG+TGG 0.581158 5:-90028651 MsG0580028989.01.T01:intron
GGGCATGGAGTTTGATGATG+AGG 0.585117 5:+90028550 None:intergenic
ATTGTGGGTCTCCTAAGACT+AGG 0.585549 5:-90027506 MsG0580028989.01.T01:CDS
GCCCGGACGTACAGATAATG+AGG 0.592159 5:-90027823 MsG0580028989.01.T01:CDS
ATAACAATCCTATTTGGAGA+AGG 0.596544 5:+90027534 None:intergenic
AACTAGGGTACCTATTGCCA+AGG 0.603623 5:+90028526 None:intergenic
ACAGTAGAAACATGAGGACT+AGG 0.612620 5:+90027714 None:intergenic
GTTCATGGTGAAGGATGTTG+GGG 0.613354 5:-90028941 MsG0580028989.01.T01:CDS
ATGTTGGGGCTCCATTCCCA+AGG 0.614235 5:-90028927 MsG0580028989.01.T01:CDS
ATTTGGAGAAGGTAAAGCAA+TGG 0.617996 5:+90027545 None:intergenic
GACAAAGAAAACATCAACAA+AGG 0.643163 5:-90029010 MsG0580028989.01.T01:CDS
AGGGTACCTATTGCCAAGGA+GGG 0.645067 5:+90028530 None:intergenic
GGTTAAGTCAAGATTCAAAG+AGG 0.653013 5:+90027566 None:intergenic
AACAATCACAAACTACACAA+AGG 0.653555 5:-90027741 MsG0580028989.01.T01:CDS
GGTGGGCACTCATAGCTGGA+AGG 0.655708 5:-90027848 MsG0580028989.01.T01:CDS
TAGGGTACCTATTGCCAAGG+AGG 0.656191 5:+90028529 None:intergenic
GTACCCACAGTAGAAACATG+AGG 0.714846 5:+90027708 None:intergenic
TTACGACCAGATATCAAACG+TGG 0.720036 5:-90028597 MsG0580028989.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAATATAATTTAAGT+GGG + Chr5:90028274-90028293 None:intergenic 10.0%
!! TAAAACAAATATAATTTAAG+TGG + Chr5:90028275-90028294 None:intergenic 10.0%
!! TATTTAAATTAGTATATGCT+CGG - Chr5:90028494-90028513 MsG0580028989.01.T01:intron 15.0%
!! ACAAACATATTTCCTTATAA+GGG + Chr5:90028525-90028544 None:intergenic 20.0%
!! ATTGATTATATACAAGTTCA+TGG - Chr5:90027551-90027570 MsG0580028989.01.T01:CDS 20.0%
!! ATTTAAATTAGTATATGCTC+GGG - Chr5:90028495-90028514 MsG0580028989.01.T01:intron 20.0%
!! GTGTATTATTATCATGATTA+GGG - Chr5:90027842-90027861 MsG0580028989.01.T01:CDS 20.0%
!! TGTGTATTATTATCATGATT+AGG - Chr5:90027841-90027860 MsG0580028989.01.T01:CDS 20.0%
!! TTCTTTGGATCATTATTAAT+GGG + Chr5:90028892-90028911 None:intergenic 20.0%
!! TTTCTTTGGATCATTATTAA+TGG + Chr5:90028893-90028912 None:intergenic 20.0%
!!! ATTGTTATTCTCTTTATTCA+TGG + Chr5:90028842-90028861 None:intergenic 20.0%
!!! ATTTTAGTAATATCACCTTT+TGG - Chr5:90028556-90028575 MsG0580028989.01.T01:CDS 20.0%
!!! TAGAACTATATGAGATTTTT+TGG + Chr5:90028616-90028635 None:intergenic 20.0%
! AAAAGCTTGTAATGAAAACT+AGG + Chr5:90028000-90028019 None:intergenic 25.0%
! AAAGCTTGTAATGAAAACTA+GGG + Chr5:90027999-90028018 None:intergenic 25.0%
! AAGTTAAATTCATTGCCAAA+AGG + Chr5:90028574-90028593 None:intergenic 25.0%
! ATAATGAGGTGAAAAACTAT+TGG - Chr5:90028698-90028717 MsG0580028989.01.T01:intron 25.0%
! ATATCGTTCTTCTTAATTCA+TGG - Chr5:90027646-90027665 MsG0580028989.01.T01:CDS 25.0%
! ATGTATGTATCTATATTAGG+TGG - Chr5:90028641-90028660 MsG0580028989.01.T01:CDS 25.0%
! ATTGATGTAGTATCTTTCTT+TGG + Chr5:90028907-90028926 None:intergenic 25.0%
! CGTAGAAAGCTAATAAAAAT+GGG - Chr5:90028733-90028752 MsG0580028989.01.T01:intron 25.0%
! GACAAACATATTTCCTTATA+AGG + Chr5:90028526-90028545 None:intergenic 25.0%
! TCGTAGAAAGCTAATAAAAA+TGG - Chr5:90028732-90028751 MsG0580028989.01.T01:intron 25.0%
! TGAACTTGAATTAACAAAGA+TGG + Chr5:90027728-90027747 None:intergenic 25.0%
! TGCATGTATGTATCTATATT+AGG - Chr5:90028638-90028657 MsG0580028989.01.T01:CDS 25.0%
! TGTATGTATCTATATTAGGT+GGG - Chr5:90028642-90028661 MsG0580028989.01.T01:CDS 25.0%
! TTAGGTATAACAATCCTATT+TGG + Chr5:90028982-90029001 None:intergenic 25.0%
!!! ACAAGCTTTTATTTACCTAT+CGG - Chr5:90028010-90028029 MsG0580028989.01.T01:intron 25.0%
AACAATCACAAACTACACAA+AGG - Chr5:90028766-90028785 MsG0580028989.01.T01:intron 30.0%
AACATATTTCCTTATAAGGG+AGG + Chr5:90028522-90028541 None:intergenic 30.0%
AGGATTGTTATACCTAATTG+TGG - Chr5:90028985-90029004 MsG0580028989.01.T01:CDS 30.0%
ATAACAATCCTATTTGGAGA+AGG + Chr5:90028976-90028995 None:intergenic 30.0%
GACAAAGAAAACATCAACAA+AGG - Chr5:90027497-90027516 MsG0580028989.01.T01:CDS 30.0%
GGATTGTTATACCTAATTGT+GGG - Chr5:90028986-90029005 MsG0580028989.01.T01:CDS 30.0%
TATATACAAGTTCATGGTGA+AGG - Chr5:90027557-90027576 MsG0580028989.01.T01:CDS 30.0%
TGAACCAATATGAGAATTCA+TGG + Chr5:90027672-90027691 None:intergenic 30.0%
TTCCAACACATTAATCCTTT+AGG - Chr5:90028170-90028189 MsG0580028989.01.T01:intron 30.0%
! ACCATGATAATTTGGAACTT+CGG - Chr5:90028231-90028250 MsG0580028989.01.T01:intron 30.0%
! ATCCTTTAGGTGAATCTTTT+TGG - Chr5:90028183-90028202 MsG0580028989.01.T01:intron 30.0%
! ATGTTTTCTTTGTCACAACA+AGG + Chr5:90027491-90027510 None:intergenic 30.0%
! ATTCTTTGAGAATCCAAGTT+CGG + Chr5:90028306-90028325 None:intergenic 30.0%
! TTGTGTAGTTTGTGATTGTT+TGG + Chr5:90028766-90028785 None:intergenic 30.0%
! TTTTATCCAAAAACCGAACT+TGG - Chr5:90028290-90028309 MsG0580028989.01.T01:intron 30.0%
!! GAATTCTCATATTGGTTCAA+TGG - Chr5:90027673-90027692 MsG0580028989.01.T01:CDS 30.0%
AAGATTCCACGTTTGATATC+TGG + Chr5:90027919-90027938 None:intergenic 35.0%
AAGTTCAACGACTCTTTAGT+AGG - Chr5:90027741-90027760 MsG0580028989.01.T01:CDS 35.0%
ACCGAAGTTCCAAATTATCA+TGG + Chr5:90028235-90028254 None:intergenic 35.0%
ATGGCCATGAATTCTCATAT+TGG - Chr5:90027665-90027684 MsG0580028989.01.T01:CDS 35.0%
ATTTGGAGAAGGTAAAGCAA+TGG + Chr5:90028965-90028984 None:intergenic 35.0%
CACCTAAAGGATTAATGTGT+TGG + Chr5:90028175-90028194 None:intergenic 35.0%
CTCCAAAAAGATTCACCTAA+AGG + Chr5:90028188-90028207 None:intergenic 35.0%
GGTTAAGTCAAGATTCAAAG+AGG + Chr5:90028944-90028963 None:intergenic 35.0%
TTGCTTTACCTTCTCCAAAT+AGG - Chr5:90028965-90028984 MsG0580028989.01.T01:CDS 35.0%
! ATATCCATATCCCTAGTCTT+AGG + Chr5:90029015-90029034 None:intergenic 35.0%
!! AAAACATCAACAAAGGTGCT+TGG - Chr5:90027504-90027523 MsG0580028989.01.T01:CDS 35.0%
AACTAATTACCAGCAGCCTT+GGG + Chr5:90027599-90027618 None:intergenic 40.0%
AAGTTCATGGTGAAGGATGT+TGG - Chr5:90027564-90027583 MsG0580028989.01.T01:CDS 40.0%
ACAGTAGAAACATGAGGACT+AGG + Chr5:90028796-90028815 None:intergenic 40.0%
AGTTCATGGTGAAGGATGTT+GGG - Chr5:90027565-90027584 MsG0580028989.01.T01:CDS 40.0%
ATCGTTGTGGCAAAAGTTGT+AGG - Chr5:90027869-90027888 MsG0580028989.01.T01:intron 40.0%
GCAAAAGTTGTAGGCTAAGA+TGG - Chr5:90027878-90027897 MsG0580028989.01.T01:intron 40.0%
TTACGACCAGATATCAAACG+TGG - Chr5:90027910-90027929 MsG0580028989.01.T01:intron 40.0%
! AGTCCTCATGTTTCTACTGT+GGG - Chr5:90028796-90028815 MsG0580028989.01.T01:intron 40.0%
! GAGAATCCAAGTTCGGTTTT+TGG + Chr5:90028299-90028318 None:intergenic 40.0%
! TAGTCCTCATGTTTCTACTG+TGG - Chr5:90028795-90028814 MsG0580028989.01.T01:intron 40.0%
!! GGGGAAGTACCATGATAATT+TGG - Chr5:90028223-90028242 MsG0580028989.01.T01:intron 40.0%
!!! ATCTTTTTGGAGTAAACCCC+AGG - Chr5:90028196-90028215 MsG0580028989.01.T01:intron 40.0%
!!! GTGCTTTTAAAACGACCGAT+AGG + Chr5:90028028-90028047 None:intergenic 40.0%
ACCTCATTATCTGTACGTCC+GGG + Chr5:90028688-90028707 None:intergenic 45.0%
ATTGTGGGTCTCCTAAGACT+AGG - Chr5:90029001-90029020 MsG0580028989.01.T01:CDS 45.0%
CACCTCATTATCTGTACGTC+CGG + Chr5:90028689-90028708 None:intergenic 45.0%
GAACTAATTACCAGCAGCCT+TGG + Chr5:90027600-90027619 None:intergenic 45.0%
GTACCCACAGTAGAAACATG+AGG + Chr5:90028802-90028821 None:intergenic 45.0%
GTCTCCTAAGACTAGGGATA+TGG - Chr5:90029008-90029027 MsG0580028989.01.T01:CDS 45.0%
GTCTTAGGAGACCCACAATT+AGG + Chr5:90029000-90029019 None:intergenic 45.0%
GTTCATGGTGAAGGATGTTG+GGG - Chr5:90027566-90027585 MsG0580028989.01.T01:CDS 45.0%
TGATTAGGGTTGCATCGTTG+TGG - Chr5:90027856-90027875 MsG0580028989.01.T01:intron 45.0%
TTGTGGGTCTCCTAAGACTA+GGG - Chr5:90029002-90029021 MsG0580028989.01.T01:CDS 45.0%
! AACTAGGGTACCTATTGCCA+AGG + Chr5:90027984-90028003 None:intergenic 45.0%
ATCAAACTCCATGCCCTCCT+TGG - Chr5:90027964-90027983 MsG0580028989.01.T01:intron 50.0%
ATGGTACTTCCCCAGTTCCT+GGG + Chr5:90028216-90028235 None:intergenic 50.0%
ATTACCAGCAGCCTTGGGAA+TGG + Chr5:90027594-90027613 None:intergenic 50.0%
ATTAGGTGGGCACTCATAGC+TGG - Chr5:90028655-90028674 MsG0580028989.01.T01:intron 50.0%
TGGAGTAAACCCCAGGAACT+GGG - Chr5:90028203-90028222 MsG0580028989.01.T01:intron 50.0%
TTGGAGTAAACCCCAGGAAC+TGG - Chr5:90028202-90028221 MsG0580028989.01.T01:intron 50.0%
! AGGGTACCTATTGCCAAGGA+GGG + Chr5:90027980-90027999 None:intergenic 50.0%
! TAGGGTACCTATTGCCAAGG+AGG + Chr5:90027981-90028000 None:intergenic 50.0%
!! GGGCATGGAGTTTGATGATG+AGG + Chr5:90027960-90027979 None:intergenic 50.0%
ACCTATTGCCAAGGAGGGCA+TGG + Chr5:90027975-90027994 None:intergenic 55.0%
ATGTTGGGGCTCCATTCCCA+AGG - Chr5:90027580-90027599 MsG0580028989.01.T01:CDS 55.0%
CATGGTACTTCCCCAGTTCC+TGG + Chr5:90028217-90028236 None:intergenic 55.0%
CTCATAGCTGGAAGGTTGCC+CGG - Chr5:90028667-90028686 MsG0580028989.01.T01:intron 55.0%
GCCCGGACGTACAGATAATG+AGG - Chr5:90028684-90028703 MsG0580028989.01.T01:intron 55.0%
GGAGTAAACCCCAGGAACTG+GGG - Chr5:90028204-90028223 MsG0580028989.01.T01:intron 55.0%
GGGTGCATCACACGACTTGA+TGG + Chr5:90028872-90028891 None:intergenic 55.0%
TCCATGCCCTCCTTGGCAAT+AGG - Chr5:90027971-90027990 MsG0580028989.01.T01:intron 55.0%
TGCTCGGGTCCTCCCTTATA+AGG - Chr5:90028510-90028529 MsG0580028989.01.T01:intron 55.0%
TGGTACTTCCCCAGTTCCTG+GGG + Chr5:90028215-90028234 None:intergenic 55.0%
GGTGGGCACTCATAGCTGGA+AGG - Chr5:90028659-90028678 MsG0580028989.01.T01:intron 60.0%
GGCTCCATTCCCAAGGCTGC+TGG - Chr5:90027587-90027606 MsG0580028989.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 90027479 90029050 90027479 ID=MsG0580028989.01;Name=MsG0580028989.01
Chr5 mRNA 90027479 90029050 90027479 ID=MsG0580028989.01.T01;Parent=MsG0580028989.01;Name=MsG0580028989.01.T01;_AED=0.45;_eAED=0.46;_QI=0|0|0|1|1|1|3|0|216
Chr5 exon 90028921 90029050 90028921 ID=MsG0580028989.01.T01:exon:26080;Parent=MsG0580028989.01.T01
Chr5 exon 90028537 90028666 90028537 ID=MsG0580028989.01.T01:exon:26079;Parent=MsG0580028989.01.T01
Chr5 exon 90027479 90027869 90027479 ID=MsG0580028989.01.T01:exon:26078;Parent=MsG0580028989.01.T01
Chr5 CDS 90028921 90029050 90028921 ID=MsG0580028989.01.T01:cds;Parent=MsG0580028989.01.T01
Chr5 CDS 90028537 90028666 90028537 ID=MsG0580028989.01.T01:cds;Parent=MsG0580028989.01.T01
Chr5 CDS 90027479 90027869 90027479 ID=MsG0580028989.01.T01:cds;Parent=MsG0580028989.01.T01
Gene Sequence

>MsG0580028989.01.T01

ATGAGAAAGCCTTGTTGTGACAAAGAAAACATCAACAAAGGTGCTTGGTCTAAGCAAGAAGATCAAAAGCTCATTGATTATATACAAGTTCATGGTGAAGGATGTTGGGGCTCCATTCCCAAGGCTGCTGGGTTGCATCGTTGTGGCAAAAGTTGTAGGCTAAGATGGTTAAACTACTTACGACCAGATATCAAACGTGGAATCTTTGCACAAGATGAAGAAGACCTCATCATCAAACTCCATGCCCTCCTTGGCAATAGGTGGGCACTCATAGCTGGAAGGTTGCCCGGACGTACAGATAATGAGGTGAAAAACTATTGGAATTCTCATATTCGTAGAAAGCTAATAAAAATGGGAATTGATCCAAACAATCACAAACTACACAAAGGCTTTCCTAGTCCTCATGTTTCTACTGTGGGTACATCATCATGTGTTGAGTCCATGAATAAAGAGAATAACAATAAACTCTCCATCAAGTCGTGTGATGCACCCATTAATAATGATCCAAAGAAAGATACTACATCAATAATTAATTCTTCATCCTCTTTGAATCTTGACTTAACCATTGCTTTACCTTCTCCAAATAGGATTGTTATACCTAATTGTGGGTCTCCTAAGACTAGGGATATGGATATTGATCTTAATTGTTAA

Protein sequence

>MsG0580028989.01.T01

MRKPCCDKENINKGAWSKQEDQKLIDYIQVHGEGCWGSIPKAAGLHRCGKSCRLRWLNYLRPDIKRGIFAQDEEDLIIKLHALLGNRWALIAGRLPGRTDNEVKNYWNSHIRRKLIKMGIDPNNHKLHKGFPSPHVSTVGTSSCVESMNKENNNKLSIKSCDAPINNDPKKDTTSIINSSSSLNLDLTIALPSPNRIVIPNCGSPKTRDMDIDLNC*