AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028997.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028997.01.T01 MTR_3g005460 70.153 392 96 3 13 384 40 430 0.0 540
MsG0580028997.01.T01 MTR_3g005460 45.607 239 80 4 13 202 277 514 6.78e-57 195
MsG0580028997.01.T01 MTR_3g005460 54.348 184 62 1 194 377 2 163 9.37e-57 194
MsG0580028997.01.T01 MTR_3g005420 66.418 402 105 3 13 384 55 456 2.58e-174 498
MsG0580028997.01.T01 MTR_3g005420 48.918 231 76 2 13 202 304 533 3.39e-62 209
MsG0580028997.01.T01 MTR_3g005420 53.448 174 58 3 212 384 35 186 6.99e-47 168
MsG0580028997.01.T01 MTR_3g005495 70.000 350 92 2 3 340 18 366 7.33e-171 486
MsG0580028997.01.T01 MTR_3g005495 47.926 217 82 4 13 201 258 471 1.14e-55 190
MsG0580028997.01.T01 MTR_3g005420 59.453 402 98 4 13 384 36 402 1.24e-146 425
MsG0580028997.01.T01 MTR_3g005420 53.448 174 58 3 212 384 16 167 2.42e-47 169
MsG0580028997.01.T01 MTR_3g005420 46.429 196 98 2 13 202 285 479 1.05e-42 156
MsG0580028997.01.T01 MTR_3g005440 57.805 410 116 4 10 389 32 414 1.58e-145 421
MsG0580028997.01.T01 MTR_5g070440 73.988 173 45 0 212 384 16 188 3.70e-85 261
MsG0580028997.01.T01 MTR_5g070440 53.247 231 66 2 13 202 36 265 4.83e-73 229
MsG0580028997.01.T01 MTR_3g005490 67.630 173 46 1 212 384 16 178 4.38e-78 242
MsG0580028997.01.T01 MTR_3g005490 52.632 228 75 3 13 208 36 262 1.02e-69 221
MsG0580028997.01.T01 MTR_3g005480 66.474 173 48 1 212 384 16 178 1.58e-75 236
MsG0580028997.01.T01 MTR_3g005480 51.293 232 79 3 4 202 27 257 3.29e-67 214
MsG0580028997.01.T01 MTR_1g034240 45.455 99 54 0 217 315 7 105 2.82e-26 110
MsG0580028997.01.T01 MTR_1g034240 41.935 93 54 0 4 96 13 105 2.45e-19 89.7
MsG0580028997.01.T01 MTR_1g015350 41.379 145 54 2 42 186 59 172 2.81e-22 93.2
MsG0580028997.01.T01 MTR_1g015350 39.716 141 58 4 260 399 58 172 4.02e-17 79.0
MsG0580028997.01.T01 MTR_4g068320 42.157 102 59 0 214 315 3 104 3.23e-22 98.2
MsG0580028997.01.T01 MTR_4g068320 35.577 104 67 0 1 104 9 112 4.34e-16 80.1
MsG0580028997.01.T01 MTR_1g034210 44.444 90 50 0 217 306 7 96 1.32e-21 95.1
MsG0580028997.01.T01 MTR_1g034210 41.667 84 47 1 13 96 22 103 1.02e-14 75.1
MsG0580028997.01.T01 MTR_1g034210 44.444 90 50 0 217 306 7 96 2.48e-21 95.1
MsG0580028997.01.T01 MTR_1g034210 37.500 96 58 1 1 96 10 103 1.36e-14 75.1
MsG0580028997.01.T01 MTR_7g050560 31.658 199 108 7 216 387 12 209 7.31e-19 87.0
MsG0580028997.01.T01 MTR_7g050560 34.286 105 65 1 14 114 29 133 1.63e-16 80.1
MsG0580028997.01.T01 MTR_3g061310 47.191 89 45 1 10 96 20 108 2.42e-18 85.1
MsG0580028997.01.T01 MTR_3g061310 28.261 184 103 5 217 374 12 192 9.06e-13 68.6
MsG0580028997.01.T01 MTR_3g098790 30.872 149 94 1 216 355 12 160 1.30e-17 83.6
MsG0580028997.01.T01 MTR_3g098790 34.118 85 56 0 14 98 29 113 5.15e-13 70.1
MsG0580028997.01.T01 MTR_3g061350 40.351 114 65 2 10 121 20 132 3.94e-17 81.6
MsG0580028997.01.T01 MTR_3g061350 28.108 185 103 5 217 374 12 193 8.42e-12 65.9
MsG0580028997.01.T01 MTR_7g050720 31.159 138 95 0 216 353 9 146 5.12e-17 81.6
MsG0580028997.01.T01 MTR_7g050720 33.333 84 56 0 14 97 26 109 3.57e-12 67.4
MsG0580028997.01.T01 MTR_7g050710 31.034 145 89 3 210 343 4 148 2.28e-16 79.7
MsG0580028997.01.T01 MTR_7g050710 34.579 107 62 1 13 111 28 134 7.32e-16 78.2
MsG0580028997.01.T01 MTR_3g061320 46.067 89 46 1 10 96 20 108 2.37e-16 79.0
MsG0580028997.01.T01 MTR_3g061320 32.192 146 92 3 216 359 11 151 2.22e-12 67.4
MsG0580028997.01.T01 MTR_3g061290 44.944 89 47 1 10 96 20 108 6.10e-16 76.3
MsG0580028997.01.T01 MTR_3g061290 34.188 117 74 2 216 332 11 124 1.13e-13 69.7
MsG0580028997.01.T01 MTR_7g050580 34.579 107 69 1 210 316 7 112 6.31e-16 78.6
MsG0580028997.01.T01 MTR_7g050580 30.357 112 75 2 14 124 29 138 6.84e-13 69.3
MsG0580028997.01.T01 MTR_5g044670 32.743 113 76 0 203 315 2 114 9.62e-16 78.2
MsG0580028997.01.T01 MTR_5g044670 36.145 83 53 0 14 96 32 114 3.12e-15 76.6
MsG0580028997.01.T01 MTR_3g061370 42.857 84 48 0 13 96 22 105 2.84e-15 75.9
MsG0580028997.01.T01 MTR_3g061370 28.082 146 103 1 214 359 6 149 9.06e-12 65.5
MsG0580028997.01.T01 MTR_3g061330 42.857 84 48 0 13 96 25 108 4.49e-15 75.1
MsG0580028997.01.T01 MTR_3g061330 28.108 185 102 4 217 374 12 192 9.49e-13 68.2
MsG0580028997.01.T01 MTR_3g061340 30.890 191 111 7 217 390 12 198 5.29e-15 75.1
MsG0580028997.01.T01 MTR_3g061340 46.667 90 45 2 10 96 20 109 3.01e-14 72.8
MsG0580028997.01.T01 MTR_7g050590 33.929 112 67 3 14 118 2 113 2.66e-14 73.6
MsG0580028997.01.T01 MTR_7g050590 31.532 111 70 1 233 337 2 112 4.71e-14 72.8
MsG0580028997.01.T01 MTR_3g061220 41.573 89 37 2 10 96 20 95 8.75e-14 67.8
MsG0580028997.01.T01 MTR_1g108780 30.909 110 71 1 11 115 10 119 1.63e-13 72.4
MsG0580028997.01.T01 MTR_1g035460 36.047 86 55 0 233 318 2 87 1.94e-12 68.6
MsG0580028997.01.T01 MTR_1g035460 21.785 381 252 13 14 375 2 355 8.98e-12 66.6
MsG0580028997.01.T01 MTR_8g103940 25.899 139 95 1 217 347 39 177 3.03e-12 68.6
MsG0580028997.01.T01 MTR_8g103940 33.333 84 56 0 13 96 54 137 3.66e-12 68.2
MsG0580028997.01.T01 MTR_7g050640 35.922 103 64 2 216 317 12 113 9.17e-12 62.0
MsG0580028997.01.T01 MTR_1g021290 34.737 95 61 1 216 310 27 120 3.45e-11 64.7
MsG0580028997.01.T01 MTR_6g043890 31.818 132 75 4 216 338 14 139 6.63e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028997.01.T01 AT3G18990 42.424 99 57 0 217 315 6 104 1.17e-20 92.8
MsG0580028997.01.T01 AT3G18990 41.667 84 49 0 13 96 21 104 2.72e-17 82.8
MsG0580028997.01.T01 AT3G18990 42.424 99 57 0 217 315 6 104 1.92e-20 92.4
MsG0580028997.01.T01 AT3G18990 41.667 84 49 0 13 96 21 104 5.33e-17 82.4
MsG0580028997.01.T01 AT4G01580 35.537 121 76 1 202 320 13 133 8.10e-20 87.0
MsG0580028997.01.T01 AT4G01580 34.737 95 62 0 4 98 36 130 5.23e-15 73.6
MsG0580028997.01.T01 AT3G18960 33.607 122 79 1 201 320 12 133 1.06e-18 84.3
MsG0580028997.01.T01 AT3G18960 33.684 95 63 0 4 98 36 130 3.12e-14 71.6
MsG0580028997.01.T01 AT3G18960 33.607 122 79 1 201 320 12 133 1.16e-18 84.0
MsG0580028997.01.T01 AT3G18960 33.684 95 63 0 4 98 36 130 1.67e-14 72.0
MsG0580028997.01.T01 AT1G49475 36.937 111 69 1 215 325 32 141 1.37e-16 77.8
MsG0580028997.01.T01 AT1G49475 38.542 96 58 1 11 106 47 141 7.78e-16 75.9
MsG0580028997.01.T01 AT3G18960 33.708 89 59 0 232 320 8 96 2.35e-14 71.2
MsG0580028997.01.T01 AT3G18960 35.632 87 56 0 12 98 7 93 1.02e-13 69.3
MsG0580028997.01.T01 AT2G24645 23.796 353 233 13 36 362 43 385 5.97e-12 67.4
MsG0580028997.01.T01 AT2G24645 24.011 379 249 15 12 362 4 371 7.70e-12 67.0
MsG0580028997.01.T01 AT2G24645 24.011 379 249 15 12 362 26 393 8.26e-12 67.0
MsG0580028997.01.T01 AT2G24645 23.796 353 233 13 36 362 43 385 8.66e-12 67.0

Find 83 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGACTTTATAACAATATT+TGG 0.103105 5:+90108306 MsG0580028997.01.T01:CDS
ACTGCTTTCCTTGAGAATTT+TGG 0.150373 5:-90106098 None:intergenic
TGTCTAAATATGCTTCTAAA+AGG 0.186290 5:+90108658 MsG0580028997.01.T01:CDS
GAGCACTTTGAACGAAAATA+AGG 0.215729 5:-90108717 None:intergenic
GGATGGTCTAATTTGGAAAA+TGG 0.229629 5:+90108365 MsG0580028997.01.T01:CDS
CTGTTCCGGATGGTCTAATT+TGG 0.238913 5:+90108358 MsG0580028997.01.T01:CDS
GATGAGTTTATAACAAGATT+TGG 0.242784 5:+90105620 MsG0580028997.01.T01:CDS
TATGGCCTTCTTAAAATGTT+TGG 0.280661 5:-90108124 None:intergenic
AATATTGTTATAAAGTCTTC+TGG 0.286515 5:-90108303 None:intergenic
ATTTCCTATCCATTCAAAAC+TGG 0.287220 5:+90105854 MsG0580028997.01.T01:CDS
CTGTAGTGACCAATCTTTAG+AGG 0.292480 5:-90105588 None:intergenic
GGACTATGACACTCTTTGTT+TGG 0.315553 5:-90108579 None:intergenic
GTTTATTGTGTATTGAATAA+AGG 0.319096 5:+90106126 MsG0580028997.01.T01:CDS
TTCAATACTCTAAGTACTAA+TGG 0.339883 5:+90108552 MsG0580028997.01.T01:CDS
AAGTGAGAGTCAAGAGAAAA+AGG 0.347170 5:+90108626 MsG0580028997.01.T01:CDS
GGTGAAATTTACAATTTGTT+TGG 0.353537 5:-90108166 None:intergenic
TACAATTTGTTTGGCATGAA+TGG 0.360092 5:-90108157 None:intergenic
ATGAGTTTATAACAAGATTT+GGG 0.360502 5:+90105621 MsG0580028997.01.T01:CDS
AAAGCAATGCGAATAACATT+TGG 0.360568 5:+90106156 MsG0580028997.01.T01:CDS
AAGACTTTATAACAATATTT+GGG 0.361172 5:+90108307 MsG0580028997.01.T01:CDS
TGCAGGCAGAGAAGGAAGTT+AGG 0.372030 5:+90108097 MsG0580028997.01.T01:intron
TTCAAAACTGGGAAGACTAA+TGG 0.374313 5:+90105866 MsG0580028997.01.T01:CDS
TGGAGCTTGAACAGAACATT+TGG 0.381563 5:-90106078 None:intergenic
CCTCACCACATATCTTCCTT+TGG 0.412092 5:-90108739 None:intergenic
AATCTTGTTATAAACTCATC+TGG 0.413404 5:-90105617 None:intergenic
TACTTGTCTTTCAAATATGA+AGG 0.413899 5:+90108471 MsG0580028997.01.T01:CDS
ACTCTCACTTGTTTCGACCT+TGG 0.417847 5:-90108613 None:intergenic
ATGAATGGGTGACGGAAGTA+TGG 0.419901 5:-90108142 None:intergenic
GAACACTACTCTATCTGTTA+TGG 0.428310 5:+90105758 MsG0580028997.01.T01:CDS
TATGTAGATTTCAAGTATGA+AGG 0.431237 5:+90105785 MsG0580028997.01.T01:CDS
TGTTGCTACAGTTACTGTTC+CGG 0.431782 5:+90108344 MsG0580028997.01.T01:CDS
AGCACTTTGAACGAAAATAA+GGG 0.459706 5:-90108716 None:intergenic
GCAGGCAGAGAAGGAAGTTA+GGG 0.460776 5:+90108098 MsG0580028997.01.T01:intron
ATCACCCTTCCTCTAAAGAT+TGG 0.475124 5:+90105579 MsG0580028997.01.T01:CDS
TGATGGTTGCGAATGGCATA+TGG 0.478132 5:+90105679 MsG0580028997.01.T01:CDS
ACAAAGAGTGTCATAGTCCT+AGG 0.483569 5:+90108583 MsG0580028997.01.T01:CDS
GTCTAAATATGCTTCTAAAA+GGG 0.483677 5:+90108659 MsG0580028997.01.T01:CDS
TTAGTACTTAGAGTATTGAA+TGG 0.488897 5:-90108549 None:intergenic
TATCCTGCGGCGAATTCAGC+AGG 0.490099 5:-90106048 None:intergenic
ATATGCCATTCGCAACCATC+AGG 0.491528 5:-90105677 None:intergenic
ATATCGACAGTCAAAGGATT+GGG 0.499850 5:-90105921 None:intergenic
ACAATTTGTTTGGCATGAAT+GGG 0.501644 5:-90108156 None:intergenic
AAATACTATTCTGTAGGATA+CGG 0.506013 5:+90108444 MsG0580028997.01.T01:CDS
ACTTGTCTTTCAAATATGAA+GGG 0.512057 5:+90108472 MsG0580028997.01.T01:CDS
TTGGATTCTTTAGATTTGCA+AGG 0.512993 5:+90106175 MsG0580028997.01.T01:CDS
TATTGAATTGCAGGCAGAGA+AGG 0.515225 5:+90108089 MsG0580028997.01.T01:intron
AGTGTCATAGTCCTAGGAAA+AGG 0.516090 5:+90108589 MsG0580028997.01.T01:CDS
CATATCGACAGTCAAAGGAT+TGG 0.519552 5:-90105922 None:intergenic
AAGGATTGGGAACGAAAAGA+AGG 0.522583 5:-90105908 None:intergenic
CACCGCATATCGACAGTCAA+AGG 0.544452 5:-90105927 None:intergenic
TTTCCTATCCATTCAAAACT+GGG 0.546790 5:+90105855 MsG0580028997.01.T01:CDS
TATTGTGTATTGAATAAAGG+TGG 0.548350 5:+90106129 MsG0580028997.01.T01:CDS
AGGGAAAACAATCTATCAGA+TGG 0.548736 5:+90106195 MsG0580028997.01.T01:CDS
ATGTAGATTTCAAGTATGAA+GGG 0.551054 5:+90105786 MsG0580028997.01.T01:CDS
TTTCGTTCAAAGTGCTCCAA+AGG 0.552472 5:+90108723 MsG0580028997.01.T01:CDS
TTCAAGCTCCAAAATTCTCA+AGG 0.552648 5:+90106090 MsG0580028997.01.T01:CDS
ATATGCTTCTAAAAGGGCTG+AGG 0.564166 5:+90108665 MsG0580028997.01.T01:CDS
TGGATTCTTTAGATTTGCAA+GGG 0.564826 5:+90106176 MsG0580028997.01.T01:CDS
AGTGACCAATCTTTAGAGGA+AGG 0.568653 5:-90105584 None:intergenic
TGTGTATTGAATAAAGGTGG+CGG 0.569727 5:+90106132 MsG0580028997.01.T01:CDS
GCCACGATTACTGTTCCTGA+TGG 0.580999 5:+90105662 MsG0580028997.01.T01:CDS
GTTCCTGCTGAATTCGCCGC+AGG 0.591184 5:+90106045 MsG0580028997.01.T01:CDS
AAAATTCTCAAGGAAAGCAG+TGG 0.599450 5:+90106100 MsG0580028997.01.T01:CDS
ATAGAGTAGTGTTCTGCGAA+CGG 0.599484 5:-90105749 None:intergenic
AAAATGGAGTTGAAGATATG+TGG 0.601427 5:+90108381 MsG0580028997.01.T01:CDS
AGGATTGGGAACGAAAAGAA+GGG 0.605751 5:-90105907 None:intergenic
GTGACCAATCTTTAGAGGAA+GGG 0.612342 5:-90105583 None:intergenic
GTGCTCCAAAGGAAGATATG+TGG 0.623189 5:+90108734 MsG0580028997.01.T01:CDS
ATCCTTTGACTGTCGATATG+CGG 0.632326 5:+90105925 MsG0580028997.01.T01:CDS
GCTACAGTTACTGTTCCGGA+TGG 0.632577 5:+90108348 MsG0580028997.01.T01:CDS
AAATTCTCAAGGAAAGCAGT+GGG 0.637805 5:+90106101 MsG0580028997.01.T01:CDS
TAGTCCTAGGAAAAGGTCCA+AGG 0.641569 5:+90108596 MsG0580028997.01.T01:CDS
CTGTTCCTGATGGTTGCGAA+TGG 0.641772 5:+90105672 MsG0580028997.01.T01:CDS
GGAGTTGAAGATATGTGGCA+AGG 0.642891 5:+90108386 MsG0580028997.01.T01:CDS
ACAAGTTACAGCTTCTCACA+CGG 0.646742 5:+90106266 MsG0580028997.01.T01:CDS
ATGAGTTTGAGCTTATCAAG+AGG 0.652349 5:+90106226 MsG0580028997.01.T01:CDS
ACCATCAGGAACAGTAATCG+TGG 0.663147 5:-90105663 None:intergenic
CCAAAGGAAGATATGTGGTG+AGG 0.663159 5:+90108739 MsG0580028997.01.T01:CDS
TGTTTGGCATGAATGGGTGA+CGG 0.666868 5:-90108150 None:intergenic
ATTTGGCTTCAAATATCCTG+CGG 0.667382 5:-90106061 None:intergenic
CATATGGAAGTAAAGAAACG+TGG 0.701477 5:+90105695 MsG0580028997.01.T01:CDS
GTAACTTGTAACACAACACG+CGG 0.742805 5:-90106252 None:intergenic
AATCACGATAGTCAACCACG+CGG 0.904290 5:-90108785 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATTCTTCTATTTTTTA+TGG + Chr5:90107026-90107045 MsG0580028997.01.T01:intron 10.0%
!! AAGACTTTATAACAATATTT+GGG + Chr5:90108307-90108326 MsG0580028997.01.T01:CDS 15.0%
!!! ATGTTTGAGTTATATATTTA+TGG + Chr5:90105985-90106004 MsG0580028997.01.T01:intron 15.0%
!!! TTTTTTTGTTGTATTTTTCT+GGG - Chr5:90107258-90107277 None:intergenic 15.0%
!!! TTTTTTTTGTTGTATTTTTC+TGG - Chr5:90107259-90107278 None:intergenic 15.0%
!! AATATTGTTATAAAGTCTTC+TGG - Chr5:90108306-90108325 None:intergenic 20.0%
!! AGTATTAATGTATGAATGTA+CGG - Chr5:90107811-90107830 None:intergenic 20.0%
!! ATAAAAAAGGAATATATTCC+CGG + Chr5:90107391-90107410 MsG0580028997.01.T01:intron 20.0%
!! ATGAGTTTATAACAAGATTT+GGG + Chr5:90105621-90105640 MsG0580028997.01.T01:CDS 20.0%
!! GAAGACTTTATAACAATATT+TGG + Chr5:90108306-90108325 MsG0580028997.01.T01:CDS 20.0%
!! GTTTATTGTGTATTGAATAA+AGG + Chr5:90106126-90106145 MsG0580028997.01.T01:CDS 20.0%
!! TAAATGGATGTATGAATATA+TGG - Chr5:90107783-90107802 None:intergenic 20.0%
!! TTGGAAAATGGTAAATATAT+GGG - Chr5:90106903-90106922 None:intergenic 20.0%
!! TTTGGAAAATGGTAAATATA+TGG - Chr5:90106904-90106923 None:intergenic 20.0%
!!! AAAAATTAAGGGCATAAAAA+AGG + Chr5:90107378-90107397 MsG0580028997.01.T01:intron 20.0%
!!! AAGTTTTCTTTTGCAAAAAT+TGG + Chr5:90105723-90105742 MsG0580028997.01.T01:CDS 20.0%
!!! ATTGATGATAGCTATAAAAA+GGG - Chr5:90106598-90106617 None:intergenic 20.0%
!!! GGATTTTACTATACATTATT+TGG + Chr5:90105951-90105970 MsG0580028997.01.T01:intron 20.0%
!!! TATCATATAGATAGTTTTGT+TGG + Chr5:90106372-90106391 MsG0580028997.01.T01:intron 20.0%
!!! TCTTTGTTTATAATGTGAAT+CGG + Chr5:90108031-90108050 MsG0580028997.01.T01:intron 20.0%
!!! TTGATGATAATATAACTCAT+CGG - Chr5:90108253-90108272 None:intergenic 20.0%
!!! TTTTCAAAATACTATTCTGT+AGG + Chr5:90108438-90108457 MsG0580028997.01.T01:CDS 20.0%
! AAAATGGTAAATATATGGGA+GGG - Chr5:90106899-90106918 None:intergenic 25.0%
! AAATACTATTCTGTAGGATA+CGG + Chr5:90108444-90108463 MsG0580028997.01.T01:CDS 25.0%
! ACAACCTCTTATGTAAAAAT+AGG + Chr5:90106490-90106509 MsG0580028997.01.T01:intron 25.0%
! ACTTGTCTTTCAAATATGAA+GGG + Chr5:90108472-90108491 MsG0580028997.01.T01:CDS 25.0%
! CAACCTCTTATGTAAAAATA+GGG + Chr5:90106491-90106510 MsG0580028997.01.T01:intron 25.0%
! CTTATTACTTATTGAATTGC+AGG + Chr5:90108080-90108099 MsG0580028997.01.T01:intron 25.0%
! GAATGAGAATTCCAAATAAA+TGG - Chr5:90106995-90107014 None:intergenic 25.0%
! GATGAGTTTATAACAAGATT+TGG + Chr5:90105620-90105639 MsG0580028997.01.T01:CDS 25.0%
! TACTTGTCTTTCAAATATGA+AGG + Chr5:90108471-90108490 MsG0580028997.01.T01:CDS 25.0%
! TATTGTGTATTGAATAAAGG+TGG + Chr5:90106129-90106148 MsG0580028997.01.T01:CDS 25.0%
! TCTTATGTAAAAATAGGGTA+AGG + Chr5:90106496-90106515 MsG0580028997.01.T01:intron 25.0%
! TGCTTGAAAAATTTGGAAAA+TGG - Chr5:90106915-90106934 None:intergenic 25.0%
! TGTCTAAATATGCTTCTAAA+AGG + Chr5:90108658-90108677 MsG0580028997.01.T01:CDS 25.0%
! TTCAATACTCTAAGTACTAA+TGG + Chr5:90108552-90108571 MsG0580028997.01.T01:CDS 25.0%
!! AATCTTGTTATAAACTCATC+TGG - Chr5:90105620-90105639 None:intergenic 25.0%
!! ATGTAGATTTCAAGTATGAA+GGG + Chr5:90105786-90105805 MsG0580028997.01.T01:CDS 25.0%
!! CATTGATGATAGCTATAAAA+AGG - Chr5:90106599-90106618 None:intergenic 25.0%
!! GGATTTTACTTTGTAGTTTT+TGG + Chr5:90108760-90108779 MsG0580028997.01.T01:CDS 25.0%
!! GGTGAAATTTACAATTTGTT+TGG - Chr5:90108169-90108188 None:intergenic 25.0%
!! GTCTAAATATGCTTCTAAAA+GGG + Chr5:90108659-90108678 MsG0580028997.01.T01:CDS 25.0%
!! TATGTAGATTTCAAGTATGA+AGG + Chr5:90105785-90105804 MsG0580028997.01.T01:CDS 25.0%
!!! AACGAAAATAAGGGTTTTTT+GGG - Chr5:90108710-90108729 None:intergenic 25.0%
!!! TTACCCTATTTTTACATAAG+AGG - Chr5:90106497-90106516 None:intergenic 25.0%
!!! TTAGTACTTAGAGTATTGAA+TGG - Chr5:90108552-90108571 None:intergenic 25.0%
AAAATGGAGTTGAAGATATG+TGG + Chr5:90108381-90108400 MsG0580028997.01.T01:CDS 30.0%
AAAGCAATGCGAATAACATT+TGG + Chr5:90106156-90106175 MsG0580028997.01.T01:CDS 30.0%
AAGAATAATGAACTCGTATG+TGG - Chr5:90108015-90108034 None:intergenic 30.0%
AATGGAGGAACAATCTATTT+AGG - Chr5:90106016-90106035 None:intergenic 30.0%
AGCACTTTGAACGAAAATAA+GGG - Chr5:90108719-90108738 None:intergenic 30.0%
AGTTATCATCAATGACTGAA+AGG + Chr5:90106419-90106438 MsG0580028997.01.T01:intron 30.0%
ATTTCCTATCCATTCAAAAC+TGG + Chr5:90105854-90105873 MsG0580028997.01.T01:CDS 30.0%
CTCAAATTTGATGAATTGAG+TGG - Chr5:90106966-90106985 None:intergenic 30.0%
CTGTATAAACTGTATATGAC+AGG - Chr5:90107745-90107764 None:intergenic 30.0%
GAAAATGGTAAATATATGGG+AGG - Chr5:90106900-90106919 None:intergenic 30.0%
TACAATACACCAAAAATGGT+GGG + Chr5:90106524-90106543 MsG0580028997.01.T01:intron 30.0%
TATGGCCTTCTTAAAATGTT+TGG - Chr5:90108127-90108146 None:intergenic 30.0%
TGAATGTACGGTTGTATAAA+TGG - Chr5:90107799-90107818 None:intergenic 30.0%
TGGATTCTTTAGATTTGCAA+GGG + Chr5:90106176-90106195 MsG0580028997.01.T01:CDS 30.0%
TTGGATTCTTTAGATTTGCA+AGG + Chr5:90106175-90106194 MsG0580028997.01.T01:CDS 30.0%
TTTCCTATCCATTCAAAACT+GGG + Chr5:90105855-90105874 MsG0580028997.01.T01:CDS 30.0%
! ACAATTTGTTTGGCATGAAT+GGG - Chr5:90108159-90108178 None:intergenic 30.0%
! ACGTTTTCTTTTGCAACAAA+TGG + Chr5:90108409-90108428 MsG0580028997.01.T01:CDS 30.0%
! ATTTTCCAAATTAGACCATC+CGG - Chr5:90108366-90108385 None:intergenic 30.0%
! TACAATTTGTTTGGCATGAA+TGG - Chr5:90108160-90108179 None:intergenic 30.0%
!! CAGACTTTTGGTTAAACAAT+GGG + Chr5:90107554-90107573 MsG0580028997.01.T01:intron 30.0%
!! GGAATCCAAACATTTTAAGA+AGG + Chr5:90108119-90108138 MsG0580028997.01.T01:CDS 30.0%
!!! AACGAAAAGAAGGGTTTTTT+GGG - Chr5:90105901-90105920 None:intergenic 30.0%
!!! AGATAGTTTTGTTGGTTGTT+AGG + Chr5:90106380-90106399 MsG0580028997.01.T01:intron 30.0%
!!! GAACGAAAATAAGGGTTTTT+TGG - Chr5:90108711-90108730 None:intergenic 30.0%
AAAAAGGAATATATTCCCGG+TGG + Chr5:90107394-90107413 MsG0580028997.01.T01:intron 35.0%
AAAATTCTCAAGGAAAGCAG+TGG + Chr5:90106100-90106119 MsG0580028997.01.T01:CDS 35.0%
AAATTCTCAAGGAAAGCAGT+GGG + Chr5:90106101-90106120 MsG0580028997.01.T01:CDS 35.0%
AAGTGAGAGTCAAGAGAAAA+AGG + Chr5:90108626-90108645 MsG0580028997.01.T01:CDS 35.0%
AGGGAAAACAATCTATCAGA+TGG + Chr5:90106195-90106214 MsG0580028997.01.T01:CDS 35.0%
ATACGACCAAACAAGACTTT+CGG - Chr5:90107904-90107923 None:intergenic 35.0%
ATATCGACAGTCAAAGGATT+GGG - Chr5:90105924-90105943 None:intergenic 35.0%
ATGAGTTTGAGCTTATCAAG+AGG + Chr5:90106226-90106245 MsG0580028997.01.T01:CDS 35.0%
CAGATAATGAGAAAAGAGTG+AGG - Chr5:90107927-90107946 None:intergenic 35.0%
CATATGGAAGTAAAGAAACG+TGG + Chr5:90105695-90105714 MsG0580028997.01.T01:CDS 35.0%
CCATTGTTTAACCAAAAGTC+TGG - Chr5:90107556-90107575 None:intergenic 35.0%
GAACACTACTCTATCTGTTA+TGG + Chr5:90105758-90105777 MsG0580028997.01.T01:CDS 35.0%
GACGATCTATGCAAAAGTTA+AGG + Chr5:90106722-90106741 MsG0580028997.01.T01:intron 35.0%
GAGCACTTTGAACGAAAATA+AGG - Chr5:90108720-90108739 None:intergenic 35.0%
GATCTGCAGATACTTCAAAT+AGG - Chr5:90106813-90106832 None:intergenic 35.0%
GCTATCATCAATGAGCAATA+TGG + Chr5:90106606-90106625 MsG0580028997.01.T01:intron 35.0%
GGATGGTCTAATTTGGAAAA+TGG + Chr5:90108365-90108384 MsG0580028997.01.T01:CDS 35.0%
GTACAATACACCAAAAATGG+TGG + Chr5:90106523-90106542 MsG0580028997.01.T01:intron 35.0%
TACACAACATCATCCATACA+TGG + Chr5:90107866-90107885 MsG0580028997.01.T01:intron 35.0%
TCACAATGATATCATCTCCA+AGG + Chr5:90107644-90107663 MsG0580028997.01.T01:intron 35.0%
TGCGTACAATACACCAAAAA+TGG + Chr5:90106520-90106539 MsG0580028997.01.T01:intron 35.0%
TGTGTATTGAATAAAGGTGG+CGG + Chr5:90106132-90106151 MsG0580028997.01.T01:CDS 35.0%
TTCAAAACTGGGAAGACTAA+TGG + Chr5:90105866-90105885 MsG0580028997.01.T01:CDS 35.0%
TTCAAGCTCCAAAATTCTCA+AGG + Chr5:90106090-90106109 MsG0580028997.01.T01:CDS 35.0%
! AAAGTTGTCAGGGAGTATAA+CGG + Chr5:90106856-90106875 MsG0580028997.01.T01:intron 35.0%
! ACTGCTTTCCTTGAGAATTT+TGG - Chr5:90106101-90106120 None:intergenic 35.0%
! ATTTGGCTTCAAATATCCTG+CGG - Chr5:90106064-90106083 None:intergenic 35.0%
! TCATGTCTCTAATTTTTGCC+TGG - Chr5:90106665-90106684 None:intergenic 35.0%
! TCTAAGTTGAAAACCCGAAA+GGG + Chr5:90107297-90107316 MsG0580028997.01.T01:intron 35.0%
! TTACATAAGAGGTTGTTTCC+AGG - Chr5:90106486-90106505 None:intergenic 35.0%
! TTATGCCCTTAATTTTTGCC+TGG - Chr5:90107375-90107394 None:intergenic 35.0%
! TTTGCATAGATCGTCCTTTT+GGG - Chr5:90106717-90106736 None:intergenic 35.0%
! TTTTGCATAGATCGTCCTTT+TGG - Chr5:90106718-90106737 None:intergenic 35.0%
!! CCAGACTTTTGGTTAAACAA+TGG + Chr5:90107553-90107572 MsG0580028997.01.T01:intron 35.0%
!! TAACTCATCGGTTCTACTAT+AGG - Chr5:90108241-90108260 None:intergenic 35.0%
!! TTGAGCTTGTGCCATTTATT+TGG + Chr5:90106981-90107000 MsG0580028997.01.T01:intron 35.0%
!!! AAAGAAGGGTTTTTTGGGTT+TGG - Chr5:90105896-90105915 None:intergenic 35.0%
!!! GAACGAAAAGAAGGGTTTTT+TGG - Chr5:90105902-90105921 None:intergenic 35.0%
!!! TTAGTCTTCCCAGTTTTGAA+TGG - Chr5:90105866-90105885 None:intergenic 35.0%
AACAAATTGAGCCGTTGATG+GGG - Chr5:90107625-90107644 None:intergenic 40.0%
AACTACTCACGAGTTCAAAG+AGG - Chr5:90107131-90107150 None:intergenic 40.0%
AAGGATTGGGAACGAAAAGA+AGG - Chr5:90105911-90105930 None:intergenic 40.0%
ACAAGTTACAGCTTCTCACA+CGG + Chr5:90106266-90106285 MsG0580028997.01.T01:CDS 40.0%
ACTACTCACGAGTTCAAAGA+GGG - Chr5:90107130-90107149 None:intergenic 40.0%
AGAAACATGGCTAAGCACTA+TGG + Chr5:90107197-90107216 MsG0580028997.01.T01:intron 40.0%
AGCAGGAACATACTACACAA+TGG - Chr5:90106034-90106053 None:intergenic 40.0%
AGGAACATACTACACAATGG+AGG - Chr5:90106031-90106050 None:intergenic 40.0%
AGGATTGGGAACGAAAAGAA+GGG - Chr5:90105910-90105929 None:intergenic 40.0%
AGTGTCATAGTCCTAGGAAA+AGG + Chr5:90108589-90108608 MsG0580028997.01.T01:CDS 40.0%
ATAGAGTAGTGTTCTGCGAA+CGG - Chr5:90105752-90105771 None:intergenic 40.0%
ATCCTTTGACTGTCGATATG+CGG + Chr5:90105925-90105944 MsG0580028997.01.T01:CDS 40.0%
ATGATTGTTGAAGCATGCCA+GGG + Chr5:90107491-90107510 MsG0580028997.01.T01:intron 40.0%
CATATCGACAGTCAAAGGAT+TGG - Chr5:90105925-90105944 None:intergenic 40.0%
CCACGGATGCTTGAAAAATT+TGG - Chr5:90106922-90106941 None:intergenic 40.0%
CTGATAGATTGCAACCCAAA+AGG + Chr5:90106700-90106719 MsG0580028997.01.T01:intron 40.0%
CTGCAGATACTTCAAATAGG+AGG - Chr5:90106810-90106829 None:intergenic 40.0%
CTGTAGTGACCAATCTTTAG+AGG - Chr5:90105591-90105610 None:intergenic 40.0%
GAACAAATTGAGCCGTTGAT+GGG - Chr5:90107626-90107645 None:intergenic 40.0%
GCTTAGCCATGTTTCTCTTT+CGG - Chr5:90107193-90107212 None:intergenic 40.0%
GGACTATGACACTCTTTGTT+TGG - Chr5:90108582-90108601 None:intergenic 40.0%
GTATCTGCAGATCAAAGACT+CGG + Chr5:90106820-90106839 MsG0580028997.01.T01:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG + Chr5:90106446-90106465 MsG0580028997.01.T01:intron 40.0%
TACACTCCGAAAGAGAAACA+TGG + Chr5:90107184-90107203 MsG0580028997.01.T01:intron 40.0%
TATTGAATTGCAGGCAGAGA+AGG + Chr5:90108089-90108108 MsG0580028997.01.T01:intron 40.0%
TCATCCATACATGGTTGCAT+CGG + Chr5:90107875-90107894 MsG0580028997.01.T01:intron 40.0%
TGAACAAATTGAGCCGTTGA+TGG - Chr5:90107627-90107646 None:intergenic 40.0%
TGGAGCTTGAACAGAACATT+TGG - Chr5:90106081-90106100 None:intergenic 40.0%
TGTAGACTGAAAACCCGAAA+GGG + Chr5:90106635-90106654 MsG0580028997.01.T01:intron 40.0%
TGTTGCTACAGTTACTGTTC+CGG + Chr5:90108344-90108363 MsG0580028997.01.T01:CDS 40.0%
TTGATGAAACGAGACAAGAC+AGG - Chr5:90107718-90107737 None:intergenic 40.0%
! AAAATCCCTAACTTTTGCCC+TGG - Chr5:90107442-90107461 None:intergenic 40.0%
! AGTGACCAATCTTTAGAGGA+AGG - Chr5:90105587-90105606 None:intergenic 40.0%
! ATATGCTTCTAAAAGGGCTG+AGG + Chr5:90108665-90108684 MsG0580028997.01.T01:CDS 40.0%
! ATCACCCTTCCTCTAAAGAT+TGG + Chr5:90105579-90105598 MsG0580028997.01.T01:CDS 40.0%
! CTCTAAGTTGAAAACCCGAA+AGG + Chr5:90107296-90107315 MsG0580028997.01.T01:intron 40.0%
! GTAACTTGTAACACAACACG+CGG - Chr5:90106255-90106274 None:intergenic 40.0%
! GTGACCAATCTTTAGAGGAA+GGG - Chr5:90105586-90105605 None:intergenic 40.0%
! TTTCGTTCAAAGTGCTCCAA+AGG + Chr5:90108723-90108742 MsG0580028997.01.T01:CDS 40.0%
!! ACAAAGAGTGTCATAGTCCT+AGG + Chr5:90108583-90108602 MsG0580028997.01.T01:CDS 40.0%
!!! CCAAATTTTTCAAGCATCCG+TGG + Chr5:90106919-90106938 MsG0580028997.01.T01:intron 40.0%
!!! CTTCCCAGTTTTGAATGGAT+AGG - Chr5:90105861-90105880 None:intergenic 40.0%
!!! CTTTTGGGTTGCAATCTATC+AGG - Chr5:90106702-90106721 None:intergenic 40.0%
!!! GTTTTTTGGGCTGAATGCAT+TGG - Chr5:90108697-90108716 None:intergenic 40.0%
AAACACTCGGCAAACTTCCT+TGG - Chr5:90107664-90107683 None:intergenic 45.0%
AAGTTGAAAACCCGAAAGGG+CGG + Chr5:90107300-90107319 MsG0580028997.01.T01:intron 45.0%
AATCACGATAGTCAACCACG+CGG - Chr5:90108788-90108807 None:intergenic 45.0%
ACCATCAGGAACAGTAATCG+TGG - Chr5:90105666-90105685 None:intergenic 45.0%
ACGAGACAAGACAGGTAAGA+TGG - Chr5:90107710-90107729 None:intergenic 45.0%
ACTCTCACTTGTTTCGACCT+TGG - Chr5:90108616-90108635 None:intergenic 45.0%
AGATCAAAGACTCGGAACTG+GGG + Chr5:90106828-90106847 MsG0580028997.01.T01:intron 45.0%
ATATGCCATTCGCAACCATC+AGG - Chr5:90105680-90105699 None:intergenic 45.0%
ATCAGAATGCGCCTTGAGAA+CGG + Chr5:90107160-90107179 MsG0580028997.01.T01:intron 45.0%
CAGATCAAAGACTCGGAACT+GGG + Chr5:90106827-90106846 MsG0580028997.01.T01:intron 45.0%
CATGATTGTTGAAGCATGCC+AGG + Chr5:90107490-90107509 MsG0580028997.01.T01:intron 45.0%
CCAAAGGAAGATATGTGGTG+AGG + Chr5:90108739-90108758 MsG0580028997.01.T01:CDS 45.0%
CCTCACCACATATCTTCCTT+TGG - Chr5:90108742-90108761 None:intergenic 45.0%
CGAGACAAGACAGGTAAGAT+GGG - Chr5:90107709-90107728 None:intergenic 45.0%
CTGTTCCGGATGGTCTAATT+TGG + Chr5:90108358-90108377 MsG0580028997.01.T01:CDS 45.0%
GACATCGCAGTACAAACACT+CGG - Chr5:90107677-90107696 None:intergenic 45.0%
GCGGTCCAGGCAAAAATTAA+GGG + Chr5:90107367-90107386 MsG0580028997.01.T01:intron 45.0%
GGAGTTGAAGATATGTGGCA+AGG + Chr5:90108386-90108405 MsG0580028997.01.T01:CDS 45.0%
GTCATGTGACTGAAAGGTCA+CGG + Chr5:90106452-90106471 MsG0580028997.01.T01:intron 45.0%
GTGCTCCAAAGGAAGATATG+TGG + Chr5:90108734-90108753 MsG0580028997.01.T01:CDS 45.0%
GTGTAGACTGAAAACCCGAA+AGG + Chr5:90106634-90106653 MsG0580028997.01.T01:intron 45.0%
TAGTCCTAGGAAAAGGTCCA+AGG + Chr5:90108596-90108615 MsG0580028997.01.T01:CDS 45.0%
TCATGTGACTGAAAGGTCAC+GGG + Chr5:90106453-90106472 MsG0580028997.01.T01:intron 45.0%
TCGCCATTTGTAAATCAGCG+CGG - Chr5:90107527-90107546 None:intergenic 45.0%
TGATGGTTGCGAATGGCATA+TGG + Chr5:90105679-90105698 MsG0580028997.01.T01:CDS 45.0%
TGATTGTTGAAGCATGCCAG+GGG + Chr5:90107492-90107511 MsG0580028997.01.T01:intron 45.0%
TGTTTGGCATGAATGGGTGA+CGG - Chr5:90108153-90108172 None:intergenic 45.0%
! AAACAATGGGTTTGCTCTCC+AGG + Chr5:90107567-90107586 MsG0580028997.01.T01:intron 45.0%
! TAGGAGGTTCTTTTGACGAC+TGG - Chr5:90106794-90106813 None:intergenic 45.0%
! TGGGGCATTCAAAGTTGTCA+GGG + Chr5:90106846-90106865 MsG0580028997.01.T01:intron 45.0%
!! ACTCCGCGCTGATTTACAAA+TGG + Chr5:90107521-90107540 MsG0580028997.01.T01:intron 45.0%
!! ATGAATGGGTGACGGAAGTA+TGG - Chr5:90108145-90108164 None:intergenic 45.0%
!!! TTGTAGTTTTTGGTTCCGCG+TGG + Chr5:90108770-90108789 MsG0580028997.01.T01:CDS 45.0%
AAGACAGGTAAGATGGGAGG+TGG - Chr5:90107703-90107722 None:intergenic 50.0%
ACTAAAGCTCCCGCATACTC+AGG - Chr5:90106564-90106583 None:intergenic 50.0%
AGACTGAAAACCCGAAAGGG+CGG + Chr5:90106638-90106657 MsG0580028997.01.T01:intron 50.0%
ATCAGCCAGCACATTCCTCT+CGG + Chr5:90106763-90106782 MsG0580028997.01.T01:intron 50.0%
ATCAGTTGCTACCTTGTGCC+GGG + Chr5:90107594-90107613 MsG0580028997.01.T01:intron 50.0%
CACCGCATATCGACAGTCAA+AGG - Chr5:90105930-90105949 None:intergenic 50.0%
CATCAGTTGCTACCTTGTGC+CGG + Chr5:90107593-90107612 MsG0580028997.01.T01:intron 50.0%
CATGGCTAAGCACTATGGAG+AGG + Chr5:90107202-90107221 MsG0580028997.01.T01:intron 50.0%
CTAAAGCTCCCGCATACTCA+GGG - Chr5:90106563-90106582 None:intergenic 50.0%
CTACCAATGACATGGCTCCA+CGG - Chr5:90106939-90106958 None:intergenic 50.0%
CTGTTCCTGATGGTTGCGAA+TGG + Chr5:90105672-90105691 MsG0580028997.01.T01:CDS 50.0%
GACAAGACAGGTAAGATGGG+AGG - Chr5:90107706-90107725 None:intergenic 50.0%
GCAGATCAAAGACTCGGAAC+TGG + Chr5:90106826-90106845 MsG0580028997.01.T01:intron 50.0%
GCAGGCAGAGAAGGAAGTTA+GGG + Chr5:90108098-90108117 MsG0580028997.01.T01:intron 50.0%
GCCACGATTACTGTTCCTGA+TGG + Chr5:90105662-90105681 MsG0580028997.01.T01:CDS 50.0%
GCTACAGTTACTGTTCCGGA+TGG + Chr5:90108348-90108367 MsG0580028997.01.T01:CDS 50.0%
GGCGGTCCAGGCAAAAATTA+AGG + Chr5:90106656-90106675 MsG0580028997.01.T01:intron 50.0%
GTGGTGACCTACCAATGACA+TGG - Chr5:90106947-90106966 None:intergenic 50.0%
TATTGCCTAAGCCGCCCTTT+CGG - Chr5:90107314-90107333 None:intergenic 50.0%
TCGGAGTGTAACCGTTCTCA+AGG - Chr5:90107174-90107193 None:intergenic 50.0%
TGCAGGCAGAGAAGGAAGTT+AGG + Chr5:90108097-90108116 MsG0580028997.01.T01:intron 50.0%
TGGACTGAAAACCCGAAAGG+GGG + Chr5:90107347-90107366 MsG0580028997.01.T01:intron 50.0%
TTGACTGTCGATATGCGGTG+AGG + Chr5:90105930-90105949 MsG0580028997.01.T01:intron 50.0%
! AAAATGGTGGGACCCTTTCC+CGG + Chr5:90106536-90106555 MsG0580028997.01.T01:intron 50.0%
! ATGCGGGAGCTTTAGTGCAT+CGG + Chr5:90106568-90106587 MsG0580028997.01.T01:intron 50.0%
! CTGGGGCATTCAAAGTTGTC+AGG + Chr5:90106845-90106864 MsG0580028997.01.T01:intron 50.0%
! GGAAAGGGTCCCACCATTTT+TGG - Chr5:90106536-90106555 None:intergenic 50.0%
! GGCGACTTCTTCCAGACTTT+TGG + Chr5:90107542-90107561 MsG0580028997.01.T01:intron 50.0%
! GTGGACTGAAAACCCGAAAG+GGG + Chr5:90107346-90107365 MsG0580028997.01.T01:intron 50.0%
! TCGACCTTGGACCTTTTCCT+AGG - Chr5:90108603-90108622 None:intergenic 50.0%
!! GGTGGACTGAAAACCCGAAA+GGG + Chr5:90107345-90107364 MsG0580028997.01.T01:intron 50.0%
!! TTAGGCAATAGAGAGCGTCC+CGG + Chr5:90107324-90107343 MsG0580028997.01.T01:intron 50.0%
!!! CTTTCGGGTTTTCAGTCCAC+CGG - Chr5:90107346-90107365 None:intergenic 50.0%
!!! TTTCGGGTTTTCAGTCCACC+GGG - Chr5:90107345-90107364 None:intergenic 50.0%
AAAACCCGAAAGGGCGGCTT+AGG + Chr5:90107306-90107325 MsG0580028997.01.T01:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr5:90106465-90106484 MsG0580028997.01.T01:intron 55.0%
AGAGAGAGAGAGAGAGCGAG+AGG - Chr5:90108190-90108209 None:intergenic 55.0%
AGGTAGCAACTGATGCGTCC+TGG - Chr5:90107588-90107607 None:intergenic 55.0%
ATTGCCTAAGCCGCCCTTTC+GGG - Chr5:90107313-90107332 None:intergenic 55.0%
CATACTCAGGGTCCGGGAAA+GGG - Chr5:90106551-90106570 None:intergenic 55.0%
CATCCGTGGAGCCATGTCAT+TGG + Chr5:90106933-90106952 MsG0580028997.01.T01:intron 55.0%
CGTGGAGCCATGTCATTGGT+AGG + Chr5:90106937-90106956 MsG0580028997.01.T01:intron 55.0%
GCGACCGATGCAACCATGTA+TGG - Chr5:90107882-90107901 None:intergenic 55.0%
GGACTGAAAACCCGAAAGGG+CGG + Chr5:90107348-90107367 MsG0580028997.01.T01:intron 55.0%
GGACTGAAAACCCGAAAGGG+GGG + Chr5:90107348-90107367 MsG0580028997.01.T01:intron 55.0%
GGGGTCCAGGGCAAAAGTTA+GGG + Chr5:90107434-90107453 MsG0580028997.01.T01:intron 55.0%
TATCCTGCGGCGAATTCAGC+AGG - Chr5:90106051-90106070 None:intergenic 55.0%
TATGTGGCGTGACGTGTGAG+CGG - Chr5:90107999-90108018 None:intergenic 55.0%
TCAGCCAGCACATTCCTCTC+GGG + Chr5:90106764-90106783 MsG0580028997.01.T01:intron 55.0%
TTTCCCGGACCCTGAGTATG+CGG + Chr5:90106551-90106570 MsG0580028997.01.T01:intron 55.0%
! TTTTGCCTGGACCGCCCTTT+CGG - Chr5:90106652-90106671 None:intergenic 55.0%
!! CGGTCGCCGAAAGTCTTGTT+TGG + Chr5:90107895-90107914 MsG0580028997.01.T01:intron 55.0%
!! CGGTGGACTGAAAACCCGAA+AGG + Chr5:90107344-90107363 MsG0580028997.01.T01:intron 55.0%
AAAACCCGAAAGGGCGGTCC+AGG + Chr5:90106644-90106663 MsG0580028997.01.T01:intron 60.0%
AAAACCCGAAAGGGGGGTCC+AGG + Chr5:90107421-90107440 MsG0580028997.01.T01:intron 60.0%
AAACCCGAAAGGGGGGTCCA+GGG + Chr5:90107422-90107441 MsG0580028997.01.T01:intron 60.0%
ATGCCCCGAGAGGAATGTGC+TGG - Chr5:90106771-90106790 None:intergenic 60.0%
CAGCCAGCACATTCCTCTCG+GGG + Chr5:90106765-90106784 MsG0580028997.01.T01:intron 60.0%
GCATACTCAGGGTCCGGGAA+AGG - Chr5:90106552-90106571 None:intergenic 60.0%
GGGGGTCCAGGGCAAAAGTT+AGG + Chr5:90107433-90107452 MsG0580028997.01.T01:intron 60.0%
GTTCCTGCTGAATTCGCCGC+AGG + Chr5:90106045-90106064 MsG0580028997.01.T01:CDS 60.0%
TTCCCGGACCCTGAGTATGC+GGG + Chr5:90106552-90106571 MsG0580028997.01.T01:intron 60.0%
TTTGCCCTGGACCCCCCTTT+CGG - Chr5:90107429-90107448 None:intergenic 60.0%
TTTGCCTGGACCGCCCTTTC+GGG - Chr5:90106651-90106670 None:intergenic 60.0%
ATGGGGTGAAGCCCGGCACA+AGG - Chr5:90107608-90107627 None:intergenic 65.0%
CTCCCGCATACTCAGGGTCC+GGG - Chr5:90106557-90106576 None:intergenic 65.0%
GCCGGGCTTCACCCCATCAA+CGG + Chr5:90107611-90107630 MsG0580028997.01.T01:intron 65.0%
GCTCCCGCATACTCAGGGTC+CGG - Chr5:90106558-90106577 None:intergenic 65.0%
TGACGACTGGATGCCCCGAG+AGG - Chr5:90106781-90106800 None:intergenic 65.0%
TTGCCCTGGACCCCCCTTTC+GGG - Chr5:90107428-90107447 None:intergenic 65.0%
! GCCGTTGATGGGGTGAAGCC+CGG - Chr5:90107615-90107634 None:intergenic 65.0%
!! AGCGCGGAGTGCTTTTCCCC+TGG - Chr5:90107511-90107530 None:intergenic 65.0%
!! GGCAATAGAGAGCGTCCCGG+TGG + Chr5:90107327-90107346 MsG0580028997.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 90105575 90108809 90105575 ID=MsG0580028997.01;Name=MsG0580028997.01
Chr5 mRNA 90105575 90108809 90105575 ID=MsG0580028997.01.T01;Parent=MsG0580028997.01;Name=MsG0580028997.01.T01;_AED=0.45;_eAED=0.46;_QI=0|0|0|1|1|1|4|0|401
Chr5 exon 90105575 90105946 90105575 ID=MsG0580028997.01.T01:exon:26074;Parent=MsG0580028997.01.T01
Chr5 exon 90106042 90106287 90106042 ID=MsG0580028997.01.T01:exon:26075;Parent=MsG0580028997.01.T01
Chr5 exon 90108102 90108176 90108102 ID=MsG0580028997.01.T01:exon:26076;Parent=MsG0580028997.01.T01
Chr5 exon 90108297 90108809 90108297 ID=MsG0580028997.01.T01:exon:26077;Parent=MsG0580028997.01.T01
Chr5 CDS 90105575 90105946 90105575 ID=MsG0580028997.01.T01:cds;Parent=MsG0580028997.01.T01
Chr5 CDS 90106042 90106287 90106042 ID=MsG0580028997.01.T01:cds;Parent=MsG0580028997.01.T01
Chr5 CDS 90108102 90108176 90108102 ID=MsG0580028997.01.T01:cds;Parent=MsG0580028997.01.T01
Chr5 CDS 90108297 90108809 90108297 ID=MsG0580028997.01.T01:cds;Parent=MsG0580028997.01.T01
Gene Sequence

>MsG0580028997.01.T01

ATGTATCACCCTTCCTCTAAAGATTGGTCACTACAGAGAATTCCAGATGAGTTTATAACAAGATTTGGGAATGAACTCAACAATGTTGCCACGATTACTGTTCCTGATGGTTGCGAATGGCATATGGAAGTAAAGAAACGTGGCAACGAAGTTTTCTTTTGCAAAAATTGGCAACCGTTCGCAGAACACTACTCTATCTGTTATGGTTGTTATGTAGATTTCAAGTATGAAGGGAATTCAAAGTTTAATGTTGTTATATATGATACAAATTCTGTCGAGATTTCCTATCCATTCAAAACTGGGAAGACTAATGGAGAACCAAACCCAAAAAACCCTTCTTTTCGTTCCCAATCCTTTGACTGTCGATATGCGTATGTTCCTGCTGAATTCGCCGCAGGATATTTGAAGCCAAATGTTCTGTTCAAGCTCCAAAATTCTCAAGGAAAGCAGTGGGAAGTTTATTGTGTATTGAATAAAGGTGGCGGAAAAGCAATGCGAATAACATTTGGATTCTTTAGATTTGCAAGGGAAAACAATCTATCAGATGGAGTTATGTATGAGTTTGAGCTTATCAAGAGGAAGCCGCGTGTTGTGTTACAAGTTACAGCTTCTCACACGGCAGAGAAGGAAGTTAGGGAATCCAAACATTTTAAGAAGGCCATACTTCCGTCACCCATTCATGCCAAACAAATTAGAATTCCAGAAGACTTTATAACAATATTTGGGAATGAACTCAAGAATGTTGCTACAGTTACTGTTCCGGATGGTCTAATTTGGAAAATGGAGTTGAAGATATGTGGCAAGGACGTTTTCTTTTGCAACAAATGGCAACAGTTTTCAAAATACTATTCTGTAGGATACGGTTATTACTTGTCTTTCAAATATGAAGGGAATTCAAATTTTAGTGTTATTATATTTGATGCAACTTCTGTTGAAATTTGCTATCCATTCAATACTCTAAGTACTAATGGAGAACCAAACAAAGAGTGTCATAGTCCTAGGAAAAGGTCCAAGGTCGAAACAAGTGAGAGTCAAGAGAAAAAGGTCAAAAACATGTCTAAATATGCTTCTAAAAGGGCTGAGGATGCTGCCAATGCATTCAGCCCAAAAAACCCTTATTTTCGTTCAAAGTGCTCCAAAGGAAGATATGTGGTGAGGATTTTACTTTGTAGTTTTTGGTTCCGCGTGGTTGACTATCGTGATTAA
Protein sequence

>MsG0580028997.01.T01

MYHPSSKDWSLQRIPDEFITRFGNELNNVATITVPDGCEWHMEVKKRGNEVFFCKNWQPFAEHYSICYGCYVDFKYEGNSKFNVVIYDTNSVEISYPFKTGKTNGEPNPKNPSFRSQSFDCRYAYVPAEFAAGYLKPNVLFKLQNSQGKQWEVYCVLNKGGGKAMRITFGFFRFARENNLSDGVMYEFELIKRKPRVVLQVTASHTAEKEVRESKHFKKAILPSPIHAKQIRIPEDFITIFGNELKNVATVTVPDGLIWKMELKICGKDVFFCNKWQQFSKYYSVGYGYYLSFKYEGNSNFSVIIFDATSVEICYPFNTLSTNGEPNKECHSPRKRSKVETSESQEKKVKNMSKYASKRAEDAANAFSPKNPYFRSKCSKGRYVVRILLCSFWFRVVDYRD*