AlfalfaGEDB | MsG0580029297.01

M. sativa cultivar ZhongmuNo.1 / MsG0580029297.01

KEGG: -
GO: -
PFAM: PF03195

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029297.01.T01	XP_003616758.1	98.235	170	3	0	1	170	27	196	2.49E-120	347

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029297.01.T01	Q8L5T5	79.851	134	24	1	1	131	33	166	4.59E-66	204

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029297.01.T01	G7KH28	98.235	170	3	0	1	170	27	196	1.19e-120	347

TFs/TRs:

Gene ID	Type	Classification
MsG0580029297.01.T01	TF	LOB

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029297.01.T01	MTR_5g083960	98.235	170	3	0	1	170	27	196	3.01e-124	347
MsG0580029297.01.T01	MTR_3g094690	62.562	203	41	4	1	169	35	236	3.88e-77	230
MsG0580029297.01.T01	MTR_3g094690	62.069	203	41	5	1	169	35	235	1.48e-74	223
MsG0580029297.01.T01	MTR_5g075020	59.606	203	46	4	1	169	29	229	1.06e-64	198
MsG0580029297.01.T01	MTR_5g075020	59.606	203	46	4	1	169	33	233	1.65e-64	197
MsG0580029297.01.T01	MTR_5g083230	60.504	119	47	0	8	126	1	119	4.99e-49	156
MsG0580029297.01.T01	MTR_2g068760	62.500	112	42	0	9	120	9	120	2.44e-48	154
MsG0580029297.01.T01	MTR_3g071590	67.619	105	34	0	9	113	4	108	3.65e-48	154
MsG0580029297.01.T01	MTR_4g083680	62.727	110	41	0	3	112	5	114	4.25e-48	154
MsG0580029297.01.T01	MTR_4g105170	61.818	110	42	0	11	120	9	118	2.94e-45	147
MsG0580029297.01.T01	MTR_7g033800	62.617	107	40	0	10	116	8	114	6.53e-45	146
MsG0580029297.01.T01	MTR_2g093310	55.752	113	50	0	12	124	32	144	3.35e-44	145
MsG0580029297.01.T01	MTR_3g031660	55.645	124	50	1	11	129	5	128	6.61e-44	143
MsG0580029297.01.T01	MTR_3g077240	59.091	110	45	0	11	120	8	117	2.61e-43	142
MsG0580029297.01.T01	MTR_6g005070	60.577	104	41	0	10	113	6	109	3.61e-43	140
MsG0580029297.01.T01	MTR_3g073690	59.813	107	43	0	10	116	6	112	5.62e-43	142
MsG0580029297.01.T01	MTR_5g017950	60.748	107	42	0	10	116	5	111	7.88e-43	145
MsG0580029297.01.T01	MTR_4g060950	55.263	114	50	1	12	124	23	136	2.31e-42	140
MsG0580029297.01.T01	MTR_6g005080	57.009	107	46	0	10	116	7	113	1.08e-41	137
MsG0580029297.01.T01	MTR_3g071420	59.804	102	41	0	10	111	11	112	5.21e-41	136
MsG0580029297.01.T01	MTR_3g452660	55.963	109	48	0	10	118	4	112	1.10e-40	139
MsG0580029297.01.T01	MTR_7g074990	53.623	138	57	2	13	143	20	157	1.61e-40	137
MsG0580029297.01.T01	MTR_1g095850	54.955	111	50	0	14	124	73	183	4.12e-40	135
MsG0580029297.01.T01	MTR_8g040900	44.231	156	87	0	10	165	4	159	5.49e-40	135
MsG0580029297.01.T01	MTR_5g083010	55.660	106	47	0	10	115	8	113	1.72e-39	132
MsG0580029297.01.T01	MTR_7g096530	53.333	105	48	1	10	113	11	115	1.24e-36	126
MsG0580029297.01.T01	MTR_7g028905	53.333	105	49	0	14	118	6	110	2.85e-36	122
MsG0580029297.01.T01	MTR_8g036085	47.794	136	65	3	13	142	23	158	2.86e-35	123
MsG0580029297.01.T01	MTR_5g093010	46.457	127	65	1	14	140	6	129	2.13e-34	118
MsG0580029297.01.T01	MTR_1g070220	53.465	101	46	1	13	112	15	115	3.70e-34	119
MsG0580029297.01.T01	MTR_8g036105	50.435	115	56	1	13	126	18	132	3.77e-34	120
MsG0580029297.01.T01	MTR_6g027710	49.107	112	56	1	12	122	39	150	1.30e-33	119
MsG0580029297.01.T01	MTR_7g096610	53.398	103	45	2	12	112	7	108	2.04e-32	115
MsG0580029297.01.T01	MTR_1g070205	53.922	102	44	2	13	112	12	112	3.47e-32	115
MsG0580029297.01.T01	MTR_5g080470	50.505	99	48	1	12	109	6	104	1.77e-30	109
MsG0580029297.01.T01	MTR_8g079660	47.115	104	55	0	13	116	8	111	3.39e-30	110
MsG0580029297.01.T01	MTR_7g075230	42.405	158	79	5	13	165	12	162	1.02e-28	105
MsG0580029297.01.T01	MTR_6g027700	41.905	105	60	1	9	112	3	107	1.51e-27	102
MsG0580029297.01.T01	MTR_8g079620	43.269	104	59	0	13	116	8	111	2.48e-26	100
MsG0580029297.01.T01	MTR_8g079580	46.667	105	55	1	13	116	8	112	6.45e-26	99.0
MsG0580029297.01.T01	MTR_6g011250	40.594	101	59	1	8	107	4	104	8.87e-26	97.4
MsG0580029297.01.T01	MTR_4g107450	41.346	104	61	0	10	113	7	110	1.89e-24	96.7
MsG0580029297.01.T01	MTR_6g011230	38.235	102	63	0	9	110	7	108	3.22e-24	94.0
MsG0580029297.01.T01	MTR_6g011200	32.484	157	91	3	14	155	10	166	4.63e-23	92.0
MsG0580029297.01.T01	MTR_2g100020	39.048	105	62	2	10	113	16	119	2.82e-21	87.8
MsG0580029297.01.T01	MTR_8g017090	35.780	109	68	2	10	117	9	116	1.18e-20	86.7
MsG0580029297.01.T01	MTR_4g099230	35.714	98	62	1	14	110	3	100	7.26e-20	81.6
MsG0580029297.01.T01	MTR_5g085390	35.714	98	62	1	14	110	10	107	7.84e-20	83.2
MsG0580029297.01.T01	MTR_4g088035	32.955	88	59	0	12	99	5	92	9.61e-15	70.1
MsG0580029297.01.T01	MTR_8g009730	28.676	136	91	1	14	149	11	140	3.15e-12	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580029297.01.T01	AT2G40470	79.851	134	24	1	1	131	8	141	2.90e-67	204
MsG0580029297.01.T01	AT2G40470	79.851	134	24	1	1	131	33	166	4.68e-67	204
MsG0580029297.01.T01	AT2G30340	73.016	126	34	0	4	129	43	168	1.24e-65	202
MsG0580029297.01.T01	AT2G30340	73.016	126	34	0	4	129	44	169	1.44e-65	202
MsG0580029297.01.T01	AT1G31320	59.322	118	48	0	9	126	9	126	2.07e-46	150
MsG0580029297.01.T01	AT2G30130	66.990	103	34	0	11	113	6	108	2.54e-46	150
MsG0580029297.01.T01	AT3G27650	60.748	107	42	0	10	116	36	142	8.95e-44	142
MsG0580029297.01.T01	AT5G63090	53.285	137	61	1	11	144	9	145	2.04e-43	142
MsG0580029297.01.T01	AT5G63090	53.285	137	61	1	11	144	9	145	2.04e-43	142
MsG0580029297.01.T01	AT5G63090	53.285	137	61	1	11	144	9	145	2.04e-43	142
MsG0580029297.01.T01	AT5G63090	53.285	137	61	1	11	144	9	145	2.04e-43	142
MsG0580029297.01.T01	AT5G66870	55.072	138	57	3	10	147	4	136	2.38e-43	146
MsG0580029297.01.T01	AT1G07900	54.867	113	51	0	12	124	32	144	1.91e-42	140
MsG0580029297.01.T01	AT2G28500	54.867	113	51	0	12	124	54	166	5.44e-42	140
MsG0580029297.01.T01	AT1G16530	51.938	129	60	2	10	136	11	139	8.34e-42	138
MsG0580029297.01.T01	AT2G23660	58.491	106	44	0	11	116	3	108	2.49e-41	141
MsG0580029297.01.T01	AT2G23660	58.491	106	44	0	11	116	3	108	2.49e-41	141
MsG0580029297.01.T01	AT2G23660	58.491	106	44	0	11	116	3	108	2.49e-41	141
MsG0580029297.01.T01	AT1G65620	61.468	109	42	0	9	117	5	113	6.14e-41	137
MsG0580029297.01.T01	AT1G65620	61.468	109	42	0	9	117	5	113	6.14e-41	137
MsG0580029297.01.T01	AT1G65620	61.468	109	42	0	9	117	5	113	6.14e-41	137
MsG0580029297.01.T01	AT1G65620	61.468	109	42	0	9	117	5	113	6.14e-41	137
MsG0580029297.01.T01	AT1G65620	61.468	109	42	0	9	117	5	113	6.14e-41	137
MsG0580029297.01.T01	AT3G11090	58.654	104	43	0	10	113	8	111	1.24e-38	130
MsG0580029297.01.T01	AT3G26620	55.000	100	45	0	14	113	6	105	1.65e-37	125
MsG0580029297.01.T01	AT3G26660	55.000	100	45	0	14	113	6	105	1.68e-37	125
MsG0580029297.01.T01	AT2G42430	47.656	128	66	1	3	129	5	132	2.73e-36	126
MsG0580029297.01.T01	AT3G03760	51.786	112	53	1	12	122	50	161	4.13e-35	124
MsG0580029297.01.T01	AT4G00210	43.972	141	75	2	7	146	5	142	1.75e-34	120
MsG0580029297.01.T01	AT2G31310	51.961	102	48	1	12	112	6	107	4.19e-33	116
MsG0580029297.01.T01	AT4G00220	55.769	104	45	1	16	118	20	123	8.39e-33	117
MsG0580029297.01.T01	AT3G58190	52.941	102	45	2	13	112	11	111	1.35e-32	116
MsG0580029297.01.T01	AT5G06080	49.107	112	56	1	12	122	6	117	2.16e-32	114
MsG0580029297.01.T01	AT2G45420	50.000	104	51	1	16	118	40	143	5.62e-31	113
MsG0580029297.01.T01	AT2G42440	50.485	103	48	2	12	112	6	107	7.69e-31	112
MsG0580029297.01.T01	AT2G45410	51.515	99	47	1	16	113	19	117	4.06e-30	108
MsG0580029297.01.T01	AT3G50510	43.396	106	60	0	11	116	10	115	1.19e-26	100
MsG0580029297.01.T01	AT3G50510	43.396	106	60	0	11	116	10	115	1.19e-26	100
MsG0580029297.01.T01	AT3G47870	38.889	108	66	0	10	117	33	140	6.20e-26	101
MsG0580029297.01.T01	AT1G72980	40.385	104	62	0	10	113	10	113	5.30e-23	91.3
MsG0580029297.01.T01	AT5G35900	31.469	143	84	2	10	152	2	130	1.48e-22	89.7
MsG0580029297.01.T01	AT3G13850	32.540	126	77	2	14	131	37	162	1.75e-20	85.9
MsG0580029297.01.T01	AT1G06280	46.753	77	41	0	14	90	25	101	4.30e-19	80.9
MsG0580029297.01.T01	AT4G22700	39.216	102	51	4	14	106	6	105	1.38e-15	71.2
MsG0580029297.01.T01	AT2G19820	33.333	90	59	1	12	100	11	100	1.47e-15	69.3
MsG0580029297.01.T01	AT5G15060	38.202	89	49	3	1	84	3	90	1.56e-12	62.0
MsG0580029297.01.T01	AT1G36000	30.108	93	63	2	8	99	4	95	9.14e-12	59.7

Find 33 sgRNAs with CRISPR-Local

Find 65 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGAGAAATATGGAGAAAA+AGG	0.233084	5:+94876684	None:intergenic
CTTGCAAATTTAATCAAAAT+AGG	0.235336	5:+94875623	None:intergenic
TAGGAGAACTTAATGCTATA+AGG	0.235865	5:-94875815	MsG0580029297.01.T01:CDS
CAACAAGTTCAATCATTATT+AGG	0.250069	5:-94875834	MsG0580029297.01.T01:CDS
GCTTCTGTCCACAAAGTCTT+TGG	0.267396	5:-94876642	MsG0580029297.01.T01:CDS
AGACTAAGAGATCCAGTTTA+TGG	0.273397	5:-94875885	MsG0580029297.01.T01:CDS
TTTCAAAAGGGAAGAATGTT+AGG	0.277293	5:-94876783	None:intergenic
ATTTGTCTGTTGTGTGTAAA+TGG	0.291668	5:+94875683	None:intergenic
GCATCTGCTCTTTGATTCTC+TGG	0.341032	5:+94875939	None:intergenic
GGAAGAATGTTAGGTCCTTC+AGG	0.355019	5:-94876774	None:intergenic
GGCTCATGAGGAGAGAAATA+TGG	0.368976	5:+94876675	None:intergenic
GCACCCATGCATCCATAAAC+TGG	0.381798	5:+94875873	None:intergenic
AGGAGAACTTAATGCTATAA+GGG	0.426620	5:-94875814	MsG0580029297.01.T01:CDS
TGCTGGCACCAAAGACTTTG+TGG	0.448216	5:+94876634	None:intergenic
TAGCAACTTTGAGACGTTGC+TGG	0.449895	5:+94876617	None:intergenic
CAACGTCTCAAAGTTGCTAT+TGG	0.452802	5:-94876613	MsG0580029297.01.T01:intron
ACTTGAAATTGAGCTATAAC+CGG	0.496798	5:+94875656	None:intergenic
AGATCCAGTTTATGGATGCA+TGG	0.526865	5:-94875877	MsG0580029297.01.T01:CDS
ATTGATACATCCTCTGAAGA+AGG	0.537222	5:+94875750	None:intergenic
GCAAACTTCTGAGGCTCATG+AGG	0.547685	5:+94876663	None:intergenic
AATACATAAATACAAACTCA+TGG	0.548288	5:-94875787	MsG0580029297.01.T01:CDS
TAAATGGAAGAAGGAAGCAT+TGG	0.572303	5:+94875699	None:intergenic
GATCCAGTTTATGGATGCAT+GGG	0.578062	5:-94875876	MsG0580029297.01.T01:CDS
TAACATGCTTCCTTCTTCAG+AGG	0.586801	5:-94875760	MsG0580029297.01.T01:CDS
TGGACAGAAGCAAACTTCTG+AGG	0.589514	5:+94876654	None:intergenic
AAAAGCTTGCATGCAGCACA+AGG	0.594669	5:+94876732	None:intergenic
GCATGCAGCACAAGGAGTAG+TGG	0.596320	5:+94876740	None:intergenic
TGTTGTGTGTAAATGGAAGA+AGG	0.615604	5:+94875690	None:intergenic
GTGGTATTTAGTGTTCCTGA+AGG	0.618012	5:+94876759	None:intergenic
GAAATTGAGCTATAACCGGT+AGG	0.628685	5:+94875660	None:intergenic
ACACAACAGACAAATCCTAC+CGG	0.648342	5:-94875675	MsG0580029297.01.T01:CDS
AGCATTGGTAGTGATGTTGA+AGG	0.658275	5:+94875714	None:intergenic
ATTGGTAGTGATGTTGAAGG+TGG	0.681106	5:+94875717	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAAAAAATATTCTAATTAG+TGG	-	Chr5:94876141-94876160	MsG0580029297.01.T01:intron	10.0%
!!!	AAATAATTTGTTATTTAGAA+GGG	+	Chr5:94876327-94876346	None:intergenic	10.0%
!!!	AAATTGATAACAAAAAATTT+AGG	-	Chr5:94875943-94875962	MsG0580029297.01.T01:CDS	10.0%
!!!	AATTGATAACAAAAAATTTA+GGG	-	Chr5:94875944-94875963	MsG0580029297.01.T01:CDS	10.0%
!!	AAAAAGTAACATTTGTAATA+TGG	-	Chr5:94876418-94876437	MsG0580029297.01.T01:intron	15.0%
!!	ATATTTGTAATAATGAACTA+AGG	+	Chr5:94875828-94875847	None:intergenic	15.0%
!!	GTTAAAAAAAAAAAATTGAG+AGG	+	Chr5:94876233-94876252	None:intergenic	15.0%
!!!	CAAATAATTTGTTATTTAGA+AGG	+	Chr5:94876328-94876347	None:intergenic	15.0%
!!!	TTAGACAACATTTTTTTAAT+CGG	+	Chr5:94876030-94876049	None:intergenic	15.0%
!!	AATACATAAATACAAACTCA+TGG	-	Chr5:94876613-94876632	MsG0580029297.01.T01:intron	20.0%
!!	TAATATGGTTGTGTTTAATT+AGG	-	Chr5:94876433-94876452	MsG0580029297.01.T01:intron	20.0%
!!	TATACATTAGCATATATAAC+AGG	-	Chr5:94875905-94875924	MsG0580029297.01.T01:CDS	20.0%
!!!	AAATGGATTACTAAATAATG+TGG	-	Chr5:94876099-94876118	MsG0580029297.01.T01:intron	20.0%
!!!	AATGGATTACTAAATAATGT+GGG	-	Chr5:94876100-94876119	MsG0580029297.01.T01:intron	20.0%
!!!	TTGATTTTATTTTAAGTCGA+TGG	-	Chr5:94875881-94875900	MsG0580029297.01.T01:CDS	20.0%
!	ATTAGCATATATAACAGGTT+TGG	-	Chr5:94875910-94875929	MsG0580029297.01.T01:CDS	25.0%
!	ATTTGTCGACCAATAATTTA+GGG	-	Chr5:94875982-94876001	MsG0580029297.01.T01:intron	25.0%
!	CAACAAGTTCAATCATTATT+AGG	-	Chr5:94876566-94876585	MsG0580029297.01.T01:intron	25.0%
!	TTGTAAAACCCCTAAATTAT+TGG	+	Chr5:94875994-94876013	None:intergenic	25.0%
	ACTTGAAATTGAGCTATAAC+CGG	+	Chr5:94876747-94876766	None:intergenic	30.0%
	AGGAGAACTTAATGCTATAA+GGG	-	Chr5:94876586-94876605	MsG0580029297.01.T01:intron	30.0%
	ATATACCAAGTTAACCTCAA+AGG	+	Chr5:94876168-94876187	None:intergenic	30.0%
	ATATCGTCATGATCTAATTG+TGG	+	Chr5:94876292-94876311	None:intergenic	30.0%
	ATTTGTCTGTTGTGTGTAAA+TGG	+	Chr5:94876720-94876739	None:intergenic	30.0%
	CATATATTGATCAGTTCATG+AGG	-	Chr5:94876265-94876284	MsG0580029297.01.T01:intron	30.0%
	CTAAAATTCCTGCATACATA+TGG	-	Chr5:94876054-94876073	MsG0580029297.01.T01:intron	30.0%
	CTCATGAACTGATCAATATA+TGG	+	Chr5:94876267-94876286	None:intergenic	30.0%
	GATTTGTCGACCAATAATTT+AGG	-	Chr5:94875981-94876000	MsG0580029297.01.T01:intron	30.0%
	TAGGAGAACTTAATGCTATA+AGG	-	Chr5:94876585-94876604	MsG0580029297.01.T01:intron	30.0%
	TATGGTTGTGTTTAATTAGG+AGG	-	Chr5:94876436-94876455	MsG0580029297.01.T01:intron	30.0%
	TTTGTCGACCAATAATTTAG+GGG	-	Chr5:94875983-94876002	MsG0580029297.01.T01:intron	30.0%
	AGACTAAGAGATCCAGTTTA+TGG	-	Chr5:94876515-94876534	MsG0580029297.01.T01:intron	35.0%
	ATGGAGAAAAAGGACATTCT+TGG	+	Chr5:94875709-94875728	None:intergenic	35.0%
	ATTCAAGTAGAATGCACATG+AGG	+	Chr5:94876363-94876382	None:intergenic	35.0%
	GGAGAGAAATATGGAGAAAA+AGG	+	Chr5:94875719-94875738	None:intergenic	35.0%
	TGGAGAAAAAGGACATTCTT+GGG	+	Chr5:94875708-94875727	None:intergenic	35.0%
	TGTTGTGTGTAAATGGAAGA+AGG	+	Chr5:94876713-94876732	None:intergenic	35.0%
!	ATTGATACATCCTCTGAAGA+AGG	+	Chr5:94876653-94876672	None:intergenic	35.0%
!	TAAATGGAAGAAGGAAGCAT+TGG	+	Chr5:94876704-94876723	None:intergenic	35.0%
!	TTCTAATTAGTGGACCTTTG+AGG	-	Chr5:94876151-94876170	MsG0580029297.01.T01:intron	35.0%
	ACACAACAGACAAATCCTAC+CGG	-	Chr5:94876725-94876744	MsG0580029297.01.T01:CDS	40.0%
	AGATCCAGTTTATGGATGCA+TGG	-	Chr5:94876523-94876542	MsG0580029297.01.T01:intron	40.0%
	CAACGTCTCAAAGTTGCTAT+TGG	-	Chr5:94875787-94875806	MsG0580029297.01.T01:CDS	40.0%
	GAAATTGAGCTATAACCGGT+AGG	+	Chr5:94876743-94876762	None:intergenic	40.0%
	GATCCAGTTTATGGATGCAT+GGG	-	Chr5:94876524-94876543	MsG0580029297.01.T01:intron	40.0%
	GGAGAGTCATAGTTGCTAAA+TGG	-	Chr5:94876082-94876101	MsG0580029297.01.T01:intron	40.0%
	GTGGTATTTAGTGTTCCTGA+AGG	+	Chr5:94875644-94875663	None:intergenic	40.0%
	TAACATGCTTCCTTCTTCAG+AGG	-	Chr5:94876640-94876659	MsG0580029297.01.T01:CDS	40.0%
	TCCTGCATACATATGGTCTA+AGG	-	Chr5:94876061-94876080	MsG0580029297.01.T01:intron	40.0%
	TCCTTAGACCATATGTATGC+AGG	+	Chr5:94876065-94876084	None:intergenic	40.0%
!!	AGCATTGGTAGTGATGTTGA+AGG	+	Chr5:94876689-94876708	None:intergenic	40.0%
!!	ATTGGTAGTGATGTTGAAGG+TGG	+	Chr5:94876686-94876705	None:intergenic	40.0%
	AAAAGCTTGCATGCAGCACA+AGG	+	Chr5:94875671-94875690	None:intergenic	45.0%
	GCATCTGCTCTTTGATTCTC+TGG	+	Chr5:94876464-94876483	None:intergenic	45.0%
	GCTTCTGTCCACAAAGTCTT+TGG	-	Chr5:94875758-94875777	MsG0580029297.01.T01:CDS	45.0%
	GGCTCATGAGGAGAGAAATA+TGG	+	Chr5:94875728-94875747	None:intergenic	45.0%
	TGGACAGAAGCAAACTTCTG+AGG	+	Chr5:94875749-94875768	None:intergenic	45.0%
!!	GTGGACCTTTGAGGTTAACT+TGG	-	Chr5:94876160-94876179	MsG0580029297.01.T01:intron	45.0%
!!	TAGCAACTTTGAGACGTTGC+TGG	+	Chr5:94875786-94875805	None:intergenic	45.0%
!!!	CATGCAAGCTTTTGAGACGA+AGG	-	Chr5:94875678-94875697	MsG0580029297.01.T01:CDS	45.0%
!!!	AATTAGAATATTTTTTAAAA+AGG	+	Chr5:94876139-94876158	None:intergenic	5.0%
	GCACCCATGCATCCATAAAC+TGG	+	Chr5:94876530-94876549	None:intergenic	50.0%
	TGCTGGCACCAAAGACTTTG+TGG	+	Chr5:94875769-94875788	None:intergenic	50.0%
!!	GCAAACTTCTGAGGCTCATG+AGG	+	Chr5:94875740-94875759	None:intergenic	50.0%
	GCATGCAGCACAAGGAGTAG+TGG	+	Chr5:94875663-94875682	None:intergenic	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	94875632	94876790	94875632	ID=MsG0580029297.01;Name=MsG0580029297.01
Chr5	mRNA	94875632	94876790	94875632	ID=MsG0580029297.01.T01;Parent=MsG0580029297.01;Name=MsG0580029297.01.T01;_AED=0.14;_eAED=0.14;_QI=0\|0\|0\|1\|1\|1\|2\|0\|170
Chr5	exon	94876614	94876790	94876614	ID=MsG0580029297.01.T01:exon:18315;Parent=MsG0580029297.01.T01
Chr5	exon	94875632	94875967	94875632	ID=MsG0580029297.01.T01:exon:18314;Parent=MsG0580029297.01.T01
Chr5	CDS	94876614	94876790	94876614	ID=MsG0580029297.01.T01:cds;Parent=MsG0580029297.01.T01
Chr5	CDS	94875632	94875967	94875632	ID=MsG0580029297.01.T01:cds;Parent=MsG0580029297.01.T01

Gene Sequence

>MsG0580029297.01.T01

ATGTTAGGTCCTTCAGGAACACTAAATACCACTACTCCTTGTGCTGCATGCAAGCTTTTGAGACGAAGGTGTGCCCAAGAATGTCCTTTTTCTCCATATTTCTCTCCTCATGAGCCTCAGAAGTTTGCTTCTGTCCACAAAGTCTTTGGTGCCAGCAACGTCTCAAAGTTGCTATTGGAGGTACCAGAGAATCAAAGAGCAGATGCAGCAAATAGTTTAGTTTATGAAGCAAATGTAAGACTAAGAGATCCAGTTTATGGATGCATGGGTGCAATTTCATCTTTGCAACAACAAGTTCAATCATTATTAGGAGAACTTAATGCTATAAGGGAAGAAATACATAAATACAAACTCATGGAAGCTAACATGCTTCCTTCTTCAGAGGATGTATCAATTGCTACTCTTCCACCTTCAACATCACTACCAATGCTTCCTTCTTCCATTTACACACAACAGACAAATCCTACCGGTTATAGCTCAATTTCAAGTGATCATATTTCCTATTTTGATTAA

Protein sequence

>MsG0580029297.01.T01

MLGPSGTLNTTTPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKLLLEVPENQRADAANSLVYEANVRLRDPVYGCMGAISSLQQQVQSLLGELNAIREEIHKYKLMEANMLPSSEDVSIATLPPSTSLPMLPSSIYTQQTNPTGYSSISSDHISYFD*