AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580029383.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029383.01.T01 MTR_5g085200 97.895 190 4 0 82 271 233 422 1.12e-134 387
MsG0580029383.01.T01 MTR_5g085200 47.980 198 69 5 1 197 1 165 3.85e-43 152
MsG0580029383.01.T01 MTR_7g079840 53.012 83 37 1 119 199 265 347 3.29e-29 114
MsG0580029383.01.T01 MTR_7g079840 37.662 154 72 3 115 266 58 189 6.33e-24 100
MsG0580029383.01.T01 MTR_7g079840 43.243 74 41 1 120 192 18 91 3.24e-15 75.1
MsG0580029383.01.T01 MTR_7g079840 53.012 83 37 1 119 199 275 357 3.43e-29 114
MsG0580029383.01.T01 MTR_7g079840 37.662 154 72 3 115 266 68 199 6.32e-24 100
MsG0580029383.01.T01 MTR_7g079840 43.243 74 41 1 120 192 28 101 3.14e-15 75.5
MsG0580029383.01.T01 MTR_4g104260 51.250 80 37 1 119 196 458 537 7.80e-27 109
MsG0580029383.01.T01 MTR_4g104260 45.588 68 37 0 125 192 286 353 2.01e-15 76.3
MsG0580029383.01.T01 MTR_4g104260 39.744 78 42 1 119 191 231 308 1.43e-13 70.9
MsG0580029383.01.T01 MTR_3g075190 48.352 91 38 2 119 207 400 483 1.63e-26 108
MsG0580029383.01.T01 MTR_3g075190 41.322 121 62 3 119 231 218 337 1.78e-19 88.2
MsG0580029383.01.T01 MTR_4g119280 48.810 84 43 0 110 193 321 404 1.76e-24 102
MsG0580029383.01.T01 MTR_4g119280 38.255 149 85 5 90 234 58 203 3.83e-21 92.8
MsG0580029383.01.T01 MTR_4g119280 45.570 79 42 1 118 195 42 120 3.52e-16 78.2
MsG0580029383.01.T01 MTR_2g019740 42.105 114 61 2 90 198 59 172 4.98e-22 95.5
MsG0580029383.01.T01 MTR_2g019740 39.024 82 48 1 118 197 302 383 2.08e-15 75.9
MsG0580029383.01.T01 MTR_4g119280 37.662 154 89 5 90 239 58 208 2.39e-21 92.4
MsG0580029383.01.T01 MTR_4g119280 45.570 79 42 1 118 195 42 120 3.73e-16 77.8
MsG0580029383.01.T01 MTR_4g119280 47.458 59 31 0 110 168 321 379 4.53e-14 71.6
MsG0580029383.01.T01 MTR_1g088875 54.430 79 32 2 120 195 92 169 3.08e-20 89.0
MsG0580029383.01.T01 MTR_1g088875 41.441 111 51 5 94 192 12 120 8.54e-15 73.6
MsG0580029383.01.T01 MTR_1g088875 41.538 65 33 1 103 167 284 343 1.64e-12 67.0
MsG0580029383.01.T01 MTR_1g088875 54.430 79 32 2 120 195 92 169 3.23e-20 89.0
MsG0580029383.01.T01 MTR_1g088875 41.441 111 51 5 94 192 12 120 9.53e-15 73.6
MsG0580029383.01.T01 MTR_1g088875 41.538 65 33 1 103 167 284 343 1.54e-12 67.0
MsG0580029383.01.T01 MTR_1g088875 54.430 79 32 2 120 195 92 169 3.30e-20 89.0
MsG0580029383.01.T01 MTR_1g088875 41.441 111 51 5 94 192 12 120 8.69e-15 73.6
MsG0580029383.01.T01 MTR_1g088875 41.538 65 33 1 103 167 284 343 1.68e-12 67.0
MsG0580029383.01.T01 MTR_8g446930 38.211 123 61 3 77 192 210 324 1.38e-19 87.4
MsG0580029383.01.T01 MTR_8g446930 37.273 110 35 2 117 192 79 188 1.08e-17 82.0
MsG0580029383.01.T01 MTR_8g446930 43.038 79 42 1 114 192 35 110 7.16e-16 77.0
MsG0580029383.01.T01 MTR_8g446930 38.211 123 61 3 77 192 360 474 1.94e-19 87.8
MsG0580029383.01.T01 MTR_8g446930 37.273 110 35 2 117 192 229 338 1.91e-17 82.0
MsG0580029383.01.T01 MTR_8g446930 37.736 106 57 3 93 192 158 260 5.58e-16 77.8
MsG0580029383.01.T01 MTR_8g446930 42.169 83 40 2 120 194 139 221 1.43e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580029383.01.T01 AT1G04990 33.621 232 122 7 32 256 100 306 8.54e-30 114
MsG0580029383.01.T01 AT1G04990 48.913 92 43 3 129 216 16 107 9.46e-18 82.0
MsG0580029383.01.T01 AT1G04990 33.613 238 125 8 32 252 181 402 7.39e-29 113
MsG0580029383.01.T01 AT1G04990 37.766 188 91 7 33 216 23 188 2.00e-25 104
MsG0580029383.01.T01 AT1G04990 33.613 238 125 8 32 252 181 402 7.39e-29 113
MsG0580029383.01.T01 AT1G04990 37.766 188 91 7 33 216 23 188 2.00e-25 104
MsG0580029383.01.T01 AT1G04990 33.613 238 125 8 32 252 181 402 7.39e-29 113
MsG0580029383.01.T01 AT1G04990 37.766 188 91 7 33 216 23 188 2.00e-25 104
MsG0580029383.01.T01 AT5G16540 46.296 108 50 3 119 220 240 345 3.59e-28 111
MsG0580029383.01.T01 AT5G16540 47.500 80 40 1 115 192 80 159 1.04e-20 90.9
MsG0580029383.01.T01 AT5G16540 43.038 79 44 1 115 192 35 113 1.39e-15 76.3
MsG0580029383.01.T01 AT5G16540 46.296 108 50 3 119 220 219 324 3.89e-28 110
MsG0580029383.01.T01 AT5G16540 47.500 80 40 1 115 192 59 138 1.32e-20 90.1
MsG0580029383.01.T01 AT5G16540 43.038 79 44 1 115 192 14 92 1.78e-15 75.9
MsG0580029383.01.T01 AT3G02830 45.736 129 62 5 119 241 271 397 1.06e-27 110
MsG0580029383.01.T01 AT3G02830 50.000 80 38 1 115 192 78 157 1.17e-21 93.6
MsG0580029383.01.T01 AT3G02830 45.349 86 45 2 109 192 26 111 1.77e-17 81.6
MsG0580029383.01.T01 AT3G02830 45.736 129 62 5 119 241 251 377 1.29e-27 109
MsG0580029383.01.T01 AT3G02830 50.000 80 38 1 115 192 58 137 1.41e-21 93.2
MsG0580029383.01.T01 AT3G02830 45.349 86 45 2 109 192 6 91 2.23e-17 81.3
MsG0580029383.01.T01 AT2G32930 40.373 161 74 4 33 192 20 159 1.91e-27 110
MsG0580029383.01.T01 AT2G32930 53.425 73 32 1 124 194 267 339 1.47e-22 96.7
MsG0580029383.01.T01 AT3G48440 50.602 83 39 1 113 193 337 419 5.25e-26 106
MsG0580029383.01.T01 AT3G48440 52.941 68 30 1 127 192 163 230 1.78e-18 85.1
MsG0580029383.01.T01 AT2G47850 48.810 84 41 1 118 199 163 246 7.65e-26 104
MsG0580029383.01.T01 AT1G04990 37.766 188 91 7 33 216 23 188 1.11e-25 104
MsG0580029383.01.T01 AT1G04990 29.661 236 117 8 32 252 181 382 2.05e-20 90.1
MsG0580029383.01.T01 AT2G47850 48.810 84 41 1 118 199 259 342 2.00e-25 104
MsG0580029383.01.T01 AT2G47850 44.737 76 41 1 118 192 41 116 2.18e-17 81.6
MsG0580029383.01.T01 AT2G47850 48.810 84 41 1 118 199 285 368 3.90e-25 103
MsG0580029383.01.T01 AT2G47850 49.333 75 36 1 120 192 88 162 4.54e-18 84.0
MsG0580029383.01.T01 AT2G47850 44.737 76 41 1 118 192 41 116 3.76e-17 81.3
MsG0580029383.01.T01 AT2G47850 48.810 84 41 1 118 199 285 368 3.90e-25 103
MsG0580029383.01.T01 AT2G47850 49.333 75 36 1 120 192 88 162 4.54e-18 84.0
MsG0580029383.01.T01 AT2G47850 44.737 76 41 1 118 192 41 116 3.76e-17 81.3
MsG0580029383.01.T01 AT5G18550 46.591 88 46 1 105 191 283 370 4.66e-25 103
MsG0580029383.01.T01 AT5G18550 40.385 104 58 1 94 193 69 172 1.74e-21 93.6
MsG0580029383.01.T01 AT5G18550 39.175 97 48 3 118 203 47 143 3.67e-17 81.3
MsG0580029383.01.T01 AT5G18550 46.591 88 46 1 105 191 251 338 4.77e-25 103
MsG0580029383.01.T01 AT5G18550 40.385 104 58 1 94 193 37 140 2.06e-21 93.2
MsG0580029383.01.T01 AT5G18550 39.175 97 48 3 118 203 15 111 5.17e-17 80.5
MsG0580029383.01.T01 AT5G18550 46.591 88 46 1 105 191 283 370 5.19e-25 103
MsG0580029383.01.T01 AT5G18550 40.385 104 58 1 94 193 69 172 1.99e-21 93.6
MsG0580029383.01.T01 AT5G18550 39.175 97 48 3 118 203 47 143 4.57e-17 80.9
MsG0580029383.01.T01 AT5G63260 43.564 101 51 2 99 193 323 423 8.25e-25 103
MsG0580029383.01.T01 AT5G63260 48.649 74 36 1 121 192 163 236 1.44e-16 79.3
MsG0580029383.01.T01 AT5G63260 43.564 101 51 2 99 193 307 407 8.54e-25 102
MsG0580029383.01.T01 AT5G63260 48.649 74 36 1 121 192 147 220 1.66e-16 79.3
MsG0580029383.01.T01 AT2G32930 40.523 153 69 4 41 192 1 132 2.02e-24 101
MsG0580029383.01.T01 AT2G32930 55.714 70 29 1 124 191 240 309 1.94e-22 96.3
MsG0580029383.01.T01 AT3G06410 52.000 75 34 1 119 191 304 378 1.21e-23 99.8
MsG0580029383.01.T01 AT3G06410 42.308 104 56 1 94 193 72 175 5.73e-22 95.1
MsG0580029383.01.T01 AT3G06410 44.156 77 41 1 118 192 50 126 2.16e-17 82.0
MsG0580029383.01.T01 AT2G32930 39.130 161 72 5 33 192 20 155 2.99e-23 98.6
MsG0580029383.01.T01 AT2G32930 53.425 73 32 1 124 194 263 335 1.37e-22 96.7
MsG0580029383.01.T01 AT5G16540 42.308 104 53 2 119 220 240 338 3.03e-23 97.8
MsG0580029383.01.T01 AT5G16540 47.500 80 40 1 115 192 80 159 9.50e-21 90.9
MsG0580029383.01.T01 AT5G16540 43.038 79 44 1 115 192 35 113 1.30e-15 76.3
MsG0580029383.01.T01 AT1G48195 48.000 75 37 1 119 191 6 80 1.21e-21 86.7
MsG0580029383.01.T01 AT5G18550 40.385 104 58 1 94 193 69 172 1.81e-21 93.6
MsG0580029383.01.T01 AT5G18550 41.379 87 39 1 105 191 283 357 1.09e-18 85.5
MsG0580029383.01.T01 AT5G18550 39.175 97 48 3 118 203 47 143 3.68e-17 81.3
MsG0580029383.01.T01 AT1G04990 29.565 230 114 7 32 256 100 286 4.82e-21 90.9
MsG0580029383.01.T01 AT1G04990 48.913 92 43 3 129 216 16 107 8.40e-18 81.6
MsG0580029383.01.T01 AT5G16540 47.500 80 40 1 115 192 59 138 8.33e-21 89.4
MsG0580029383.01.T01 AT5G16540 43.038 79 44 1 115 192 14 92 1.47e-15 75.1
MsG0580029383.01.T01 AT5G16540 49.057 53 21 2 119 167 219 269 7.85e-11 61.6
MsG0580029383.01.T01 AT3G12680 44.318 88 40 1 114 192 412 499 1.09e-19 88.6
MsG0580029383.01.T01 AT3G12680 42.308 104 54 2 114 217 217 314 2.96e-19 87.4

Find 83 sgRNAs with CRISPR-Local

Find 270 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCAAACTTTGCAACATTT+TGG 0.120020 5:+96197264 None:intergenic
GTTTGTGCTATCCTTTCTTT+AGG 0.127413 5:+96193771 None:intergenic
TTTATCTCTTGGGGTCAATT+TGG 0.227511 5:-96192886 MsG0580029383.01.T01:three_prime_UTR
CCGGCGGGAGAGACACTTTC+TGG 0.243331 5:-96193903 MsG0580029383.01.T01:CDS
TGGACAGTTGAAAGCCTTCT+TGG 0.267807 5:+96193274 None:intergenic
AATTGACCCCAAGAGATAAA+AGG 0.275869 5:+96192889 None:intergenic
TCTGGTTGCTCAGGTCTATC+TGG 0.304316 5:+96193855 None:intergenic
TTATTTATATTTAATTTCAT+TGG 0.307942 5:-96197134 MsG0580029383.01.T01:five_prime_UTR
AGCACCGGAACATGCAAATA+TGG 0.322651 5:-96193816 MsG0580029383.01.T01:CDS
TTTGTGCTATCCTTTCTTTA+GGG 0.324288 5:+96193772 None:intergenic
TGCTCTTATTACAGAATCTA+TGG 0.326952 5:-96193412 MsG0580029383.01.T01:CDS
AACTCACCTAGATGTTAAAA+AGG 0.326963 5:+96197099 None:intergenic
TTCGTATTGCAGAAGCTATT+CGG 0.340006 5:-96196320 MsG0580029383.01.T01:CDS
ACCTTCGTCCGAGTCTTTAC+AGG 0.352984 5:-96193137 MsG0580029383.01.T01:CDS
ATCTATGGAGTATGCAAGTT+TGG 0.357289 5:-96193397 MsG0580029383.01.T01:CDS
TATAATAATAATATTCCAAT+TGG 0.364535 5:+96197231 None:intergenic
CTATCCTTTCTTTAGGGTGG+TGG 0.386879 5:+96193778 None:intergenic
ATAAAACCAGTAGGCATTGC+AGG 0.387637 5:+96193957 None:intergenic
TGCATGAATAGAGTTTCTAT+TGG 0.407759 5:-96192813 MsG0580029383.01.T01:three_prime_UTR
CTGCAGAATTGCAGATCAAA+AGG 0.410499 5:+96193025 None:intergenic
GAATTTCACTCAGTATTTGT+AGG 0.414918 5:+96192855 None:intergenic
GTTGTTGTTAATGTTATTGT+CGG 0.419591 5:-96197304 None:intergenic
TATTTACAGTCTGGTTGCTC+AGG 0.430194 5:+96193846 None:intergenic
GCCTCAATCAATGCCTTATC+CGG 0.436673 5:-96196259 MsG0580029383.01.T01:CDS
AATGCACTTACAGGTCTCAT+AGG 0.440267 5:+96193723 None:intergenic
CTCATAAAGTATTTACAGTC+TGG 0.442202 5:+96193837 None:intergenic
AAAGCCTTCTTGGACTAGTA+AGG 0.442412 5:+96193284 None:intergenic
AAGAACTTCCTGAGAGAGTT+GGG 0.442954 5:-96195944 MsG0580029383.01.T01:CDS
TTCTGAGAGATAGCCACAAC+TGG 0.446204 5:+96193352 None:intergenic
TCAGGTTGCCCAACTCTCTC+AGG 0.451542 5:+96195936 None:intergenic
ATTGACCCCAAGAGATAAAA+GGG 0.454943 5:+96192890 None:intergenic
AGATCCATATTTGCATGTTC+CGG 0.472187 5:+96193812 None:intergenic
GAATGCTGTTCTAATCCATC+TGG 0.473136 5:-96196948 MsG0580029383.01.T01:CDS
CCATCTGGTGATAACATTGA+AGG 0.474193 5:-96196933 MsG0580029383.01.T01:intron
AGCTTGTTTAGATGAATCTT+CGG 0.476106 5:+96193183 None:intergenic
TTCACCAGTCGATCCGGATA+AGG 0.477576 5:+96196246 None:intergenic
AAAATAAACATACCTCAATC+AGG 0.483549 5:+96195918 None:intergenic
GTCAGGTTCACCAGTCGATC+CGG 0.488196 5:+96196240 None:intergenic
TGCAGAATTGCAGATCAAAA+GGG 0.495104 5:+96193026 None:intergenic
ATTAACCCTGCAATGCCTAC+TGG 0.496129 5:-96193963 MsG0580029383.01.T01:CDS
TTGTGACAATCATGAGCTTG+TGG 0.505135 5:-96192977 MsG0580029383.01.T01:three_prime_UTR
ATGGAGATGTCTCGGTTGGT+TGG 0.505736 5:+96193254 None:intergenic
GATCTGCAATTCTGCAGGGT+TGG 0.514799 5:-96193019 MsG0580029383.01.T01:three_prime_UTR
GTGCTATCCTTTCTTTAGGG+TGG 0.514914 5:+96193775 None:intergenic
CCTTCAATGTTATCACCAGA+TGG 0.522380 5:+96196933 None:intergenic
GGGTTGGATAGTTTGTTCAA+TGG 0.523230 5:-96193003 MsG0580029383.01.T01:three_prime_UTR
TGTGACAATCATGAGCTTGT+GGG 0.528817 5:-96192976 MsG0580029383.01.T01:three_prime_UTR
TTCGATGGAGATGTCTCGGT+TGG 0.530171 5:+96193250 None:intergenic
TTGTCAGTTGATTGTTTCGA+TGG 0.531763 5:+96193235 None:intergenic
ATAATAATATTCCAATTGGA+TGG 0.532368 5:+96197235 None:intergenic
GAAGAACTTCCTGAGAGAGT+TGG 0.537206 5:-96195945 MsG0580029383.01.T01:CDS
TTGTTGTTAATGTTATTGTC+GGG 0.538910 5:-96197303 None:intergenic
TGTCTACGACTACATGAATC+CGG 0.541765 5:-96193922 MsG0580029383.01.T01:CDS
TGTAAATACTTTATGAGCAC+CGG 0.550440 5:-96193831 MsG0580029383.01.T01:CDS
AGAGACACTTTCTGGTGGAC+AGG 0.555997 5:-96193895 MsG0580029383.01.T01:CDS
AGTTCCACCACCCTAAAGAA+AGG 0.558473 5:-96193782 MsG0580029383.01.T01:CDS
AATGCCTTATCCGGATCGAC+TGG 0.562256 5:-96196250 MsG0580029383.01.T01:intron
TTGTTTCGATGGAGATGTCT+CGG 0.567749 5:+96193246 None:intergenic
CAAATTTGATCATCCAGTTG+TGG 0.569323 5:-96193365 MsG0580029383.01.T01:CDS
TCCGGATAAGGCATTGATTG+AGG 0.571672 5:+96196258 None:intergenic
GGATGATCAAATTTGCATGT+TGG 0.583840 5:+96193373 None:intergenic
CCAGAAAGTGTCTCTCCCGC+CGG 0.585264 5:+96193903 None:intergenic
TCCTGTAAAGACTCGGACGA+AGG 0.587786 5:+96193136 None:intergenic
CTCTCCTTACTAGTCCAAGA+AGG 0.588326 5:-96193288 MsG0580029383.01.T01:CDS
ACATTATCAATTAATCCACT+TGG 0.589067 5:-96193750 MsG0580029383.01.T01:CDS
GTGACAATCATGAGCTTGTG+GGG 0.594243 5:-96192975 MsG0580029383.01.T01:three_prime_UTR
GAATACTGATAGAGTAGGCG+AGG 0.609226 5:+96193318 None:intergenic
GCATCGAATACTGATAGAGT+AGG 0.610445 5:+96193313 None:intergenic
GTGGCTATCTCTCAGAACTA+CGG 0.612160 5:-96193346 MsG0580029383.01.T01:CDS
TACGACTACATGAATCCGGC+GGG 0.613456 5:-96193918 MsG0580029383.01.T01:CDS
TTAGATCCAATAAAACCAGT+AGG 0.616664 5:+96193948 None:intergenic
AGTTTATTCCTGTAAAGACT+CGG 0.621015 5:+96193129 None:intergenic
GCAGAATTGCAGATCAAAAG+GGG 0.625119 5:+96193027 None:intergenic
AGAGTTGGGCAACCTGATTG+AGG 0.634171 5:-96195930 MsG0580029383.01.T01:intron
GCGGGAGAGACACTTTCTGG+TGG 0.637718 5:-96193900 MsG0580029383.01.T01:CDS
TAAAACCAGTAGGCATTGCA+GGG 0.641286 5:+96193958 None:intergenic
TTCTGCAATACGAATCACAA+AGG 0.650199 5:+96196329 None:intergenic
CTACGACTACATGAATCCGG+CGG 0.676232 5:-96193919 MsG0580029383.01.T01:CDS
AATACTGATAGAGTAGGCGA+GGG 0.679258 5:+96193319 None:intergenic
CAGAATTGCAGATCAAAAGG+GGG 0.684919 5:+96193028 None:intergenic
TTGACCCCAAGAGATAAAAG+GGG 0.687659 5:+96192891 None:intergenic
GGTCTCATAGGAAGACCAAG+TGG 0.702644 5:+96193735 None:intergenic
TGACAATCATGAGCTTGTGG+GGG 0.723888 5:-96192974 MsG0580029383.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAATAATAATATTCCAAT+TGG + Chr5:96192844-96192863 None:intergenic 10.0%
!!! AAAAGTATCTTAAAATATTA+GGG + Chr5:96196573-96196592 None:intergenic 10.0%
!!! ATAGTTTATAGATTATTTTT+TGG + Chr5:96196505-96196524 None:intergenic 10.0%
!!! TAAAAGTATCTTAAAATATT+AGG + Chr5:96196574-96196593 None:intergenic 10.0%
!!! TTTTTTTTTCTTCTTTTTTT+CGG - Chr5:96196994-96197013 MsG0580029383.01.T01:intron 10.0%
!! AAACAAAAATCTAATAAGTT+TGG + Chr5:96194648-96194667 None:intergenic 15.0%
!! CTCTTAATTAAGTTAATTAT+AGG + Chr5:96194916-96194935 None:intergenic 15.0%
!! GAAAAAAAGAAGAAAAAAAA+AGG + Chr5:96196995-96197014 None:intergenic 15.0%
!! TACTAATATTAAATTCTGTT+TGG + Chr5:96195102-96195121 None:intergenic 15.0%
!! TTAAAAAGTGAATTTATTCA+AGG + Chr5:96194303-96194322 None:intergenic 15.0%
!! TTAACTTAATTAAGAGTTTA+TGG - Chr5:96194920-96194939 MsG0580029383.01.T01:intron 15.0%
!!! GTTTTTATAATCTGTAATTT+AGG - Chr5:96194060-96194079 MsG0580029383.01.T01:intron 15.0%
!!! TTATTAGATTTTTGTTTTGA+TGG - Chr5:96194651-96194670 MsG0580029383.01.T01:intron 15.0%
!!! TTGAAGTTTTATTTTTCTTT+TGG - Chr5:96196968-96196987 MsG0580029383.01.T01:CDS 15.0%
!!! TTTTTTTCACAATAAAAAGT+TGG + Chr5:96196404-96196423 None:intergenic 15.0%
!! AAAAATCTAATAAGTTTGGA+AGG + Chr5:96194644-96194663 None:intergenic 20.0%
!! ATAATAATATTCCAATTGGA+TGG + Chr5:96192840-96192859 None:intergenic 20.0%
!! ATCTAGTAAATAAATTCTAC+AGG + Chr5:96194693-96194712 None:intergenic 20.0%
!! ATTTCATCTTAAAAGCTTAA+AGG - Chr5:96193016-96193035 MsG0580029383.01.T01:three_prime_UTR 20.0%
!! TTTCATCTTAAAAGCTTAAA+GGG - Chr5:96193017-96193036 MsG0580029383.01.T01:three_prime_UTR 20.0%
!!! CTATTTTATTTGTCGAAAAA+GGG - Chr5:96196082-96196101 MsG0580029383.01.T01:intron 20.0%
!!! TTATCTTTTTGTTATAGAAG+TGG + Chr5:96194981-96195000 None:intergenic 20.0%
!!! TTTTTACCTTTTTAACATCT+AGG - Chr5:96192967-96192986 MsG0580029383.01.T01:three_prime_UTR 20.0%
! AAAATAAACATACCTCAATC+AGG + Chr5:96194157-96194176 None:intergenic 25.0%
! AATAAGATGAAAAGATCTTC+AGG - Chr5:96195047-96195066 MsG0580029383.01.T01:intron 25.0%
! AATTAGCAAGTATTTCAAAC+AGG + Chr5:96194423-96194442 None:intergenic 25.0%
! ACATTATCAATTAATCCACT+TGG - Chr5:96196322-96196341 MsG0580029383.01.T01:CDS 25.0%
! AGAACACCAATAAATGAAAA+GGG - Chr5:96194530-96194549 MsG0580029383.01.T01:intron 25.0%
! AGTATCTTAAAATATTAGGG+AGG + Chr5:96196570-96196589 None:intergenic 25.0%
! ATGACATAATTAAGAAGAAG+AGG - Chr5:96194755-96194774 MsG0580029383.01.T01:intron 25.0%
! CAATAAAAAGTTGGAACAAA+TGG + Chr5:96196395-96196414 None:intergenic 25.0%
! CTCATACTGTTATTAGATTT+CGG - Chr5:96194091-96194110 MsG0580029383.01.T01:intron 25.0%
! TAGAACACCAATAAATGAAA+AGG - Chr5:96194529-96194548 MsG0580029383.01.T01:intron 25.0%
! TCAGAAGAAAAATCATGAAA+AGG + Chr5:96193959-96193978 None:intergenic 25.0%
! TCTTCTTCTTAATTATGTCA+TGG + Chr5:96194756-96194775 None:intergenic 25.0%
! TTAAGAGTGAATTCAAGAAT+AGG - Chr5:96194267-96194286 MsG0580029383.01.T01:intron 25.0%
! TTATTACTGCTTGAATTTGT+TGG - Chr5:96193683-96193702 MsG0580029383.01.T01:intron 25.0%
! TTGATCCAGTTTAATTGTAT+TGG - Chr5:96193638-96193657 MsG0580029383.01.T01:intron 25.0%
! TTGCTTTATGATGCAATAAA+GGG - Chr5:96193561-96193580 MsG0580029383.01.T01:intron 25.0%
! TTTGCTTTATGATGCAATAA+AGG - Chr5:96193560-96193579 MsG0580029383.01.T01:intron 25.0%
!! CATTTTCTTCTTAATGCTTA+GGG - Chr5:96196368-96196387 MsG0580029383.01.T01:intron 25.0%
!! TGTTTTCAATGTGAAATCTA+TGG + Chr5:96192877-96192896 None:intergenic 25.0%
!! TTGAAAACTTGTCTATTTTC+TGG + Chr5:96193104-96193123 None:intergenic 25.0%
!! TTTCTTCCCTTTTCATTTAT+TGG + Chr5:96194539-96194558 None:intergenic 25.0%
!!! AATCTACAATTGTTGCTTTT+AGG - Chr5:96195360-96195379 MsG0580029383.01.T01:intron 25.0%
!!! ATGATGATGTGTTCTATTTT+TGG - Chr5:96193307-96193326 MsG0580029383.01.T01:CDS 25.0%
!!! GATTGAGGTATGTTTATTTT+TGG - Chr5:96194157-96194176 MsG0580029383.01.T01:intron 25.0%
!!! GCTATTTTATTTGTCGAAAA+AGG - Chr5:96196081-96196100 MsG0580029383.01.T01:intron 25.0%
AACTCACCTAGATGTTAAAA+AGG + Chr5:96192976-96192995 None:intergenic 30.0%
AATGTCATATTTATCTGGAC+AGG - Chr5:96195571-96195590 MsG0580029383.01.T01:intron 30.0%
ACAGTCCAATACAATTAAAC+TGG + Chr5:96193646-96193665 None:intergenic 30.0%
AGATCTCTCTATGACAATAA+TGG - Chr5:96194709-96194728 MsG0580029383.01.T01:intron 30.0%
AGGACAAAAATAAGTGCAAA+AGG + Chr5:96194355-96194374 None:intergenic 30.0%
AGTTTATTCCTGTAAAGACT+CGG + Chr5:96196946-96196965 None:intergenic 30.0%
CACAAAGTTTACTCTTCTAA+TGG - Chr5:96195308-96195327 MsG0580029383.01.T01:intron 30.0%
CATTAGAAGAGTAAACTTTG+TGG + Chr5:96195310-96195329 None:intergenic 30.0%
CCAGATAAATATGACATTCT+CGG + Chr5:96195569-96195588 None:intergenic 30.0%
GAATTTCACTCAGTATTTGT+AGG + Chr5:96197220-96197239 None:intergenic 30.0%
GAGGAAATAATATCAAGTTC+AGG - Chr5:96194774-96194793 MsG0580029383.01.T01:intron 30.0%
TAAGAAGAAAATGCACTTAC+AGG + Chr5:96196361-96196380 None:intergenic 30.0%
TGATTCTATGCAAGTAAACA+TGG + Chr5:96193494-96193513 None:intergenic 30.0%
TGCATGAATAGAGTTTCTAT+TGG - Chr5:96197259-96197278 MsG0580029383.01.T01:five_prime_UTR 30.0%
TGCTCTTATTACAGAATCTA+TGG - Chr5:96196660-96196679 MsG0580029383.01.T01:intron 30.0%
TGTAAATACTTTATGAGCAC+CGG - Chr5:96196241-96196260 MsG0580029383.01.T01:intron 30.0%
TTAGATCCAATAAAACCAGT+AGG + Chr5:96196127-96196146 None:intergenic 30.0%
TTAGCTAAACGAATACATGA+AGG - Chr5:96195780-96195799 MsG0580029383.01.T01:intron 30.0%
TTATTATACTTGATCGCACA+TGG - Chr5:96193518-96193537 MsG0580029383.01.T01:intron 30.0%
TTTCCTAAACAAGAAAAGAC+TGG + Chr5:96195938-96195957 None:intergenic 30.0%
TTTGTGCTATCCTTTCTTTA+GGG + Chr5:96196303-96196322 None:intergenic 30.0%
! AAATAAAGCACTTGGTTCAA+AGG + Chr5:96195284-96195303 None:intergenic 30.0%
! AATAAAGCACTTGGTTCAAA+GGG + Chr5:96195283-96195302 None:intergenic 30.0%
! ACTGTTTTCATAAGTTATCC+TGG - Chr5:96195012-96195031 MsG0580029383.01.T01:intron 30.0%
! AGCTTGTTTAGATGAATCTT+CGG + Chr5:96196892-96196911 None:intergenic 30.0%
! ATATACTGATTAACCTGGTA+TGG - Chr5:96195737-96195756 MsG0580029383.01.T01:intron 30.0%
! ATTCTGTTTGGAATAGCTTA+TGG + Chr5:96195090-96195109 None:intergenic 30.0%
! CTCATAAAGTATTTACAGTC+TGG + Chr5:96196238-96196257 None:intergenic 30.0%
! GCATTTTCTTCTTAATGCTT+AGG - Chr5:96196367-96196386 MsG0580029383.01.T01:intron 30.0%
! TGATTTTCTGATTCCTATGT+TGG - Chr5:96196615-96196634 MsG0580029383.01.T01:intron 30.0%
! TGTGGAAAAAATAAAGCACT+TGG + Chr5:96195292-96195311 None:intergenic 30.0%
! TTGCAGTATTTTCTTAAGAC+AGG - Chr5:96195148-96195167 MsG0580029383.01.T01:intron 30.0%
! TTTGGAATAGCTTATGGAAA+CGG + Chr5:96195084-96195103 None:intergenic 30.0%
! TTTTATGAACATGTAGTCTG+TGG - Chr5:96194009-96194028 MsG0580029383.01.T01:intron 30.0%
!! ACCTAAAGTATTGAAGACAA+CGG + Chr5:96195235-96195254 None:intergenic 30.0%
!! CATTGATTTCCAATCACATT+CGG - Chr5:96195880-96195899 MsG0580029383.01.T01:intron 30.0%
!! GTTCTGTTTTGGATGTTAAT+CGG + Chr5:96195916-96195935 None:intergenic 30.0%
!! TCTGATCATCATTGTTTTGT+TGG - Chr5:96193241-96193260 MsG0580029383.01.T01:CDS 30.0%
!! TTAACTTGTGTGAGTGAAAA+AGG - Chr5:96193435-96193454 MsG0580029383.01.T01:intron 30.0%
!!! CACTTATTTTTGTCCTTTTG+TGG - Chr5:96194359-96194378 MsG0580029383.01.T01:intron 30.0%
AAAAGCTTAAAGGGTCATCA+GGG - Chr5:96193026-96193045 MsG0580029383.01.T01:three_prime_UTR 35.0%
AAAAGGGAAGAAACTGATGT+AGG - Chr5:96194546-96194565 MsG0580029383.01.T01:intron 35.0%
AAGACAGGAACATGTAAGTA+TGG - Chr5:96195163-96195182 MsG0580029383.01.T01:intron 35.0%
AATAAGTTATCCTGCCAATG+TGG - Chr5:96194601-96194620 MsG0580029383.01.T01:intron 35.0%
AATATCATCATCCCAAAGAC+AGG - Chr5:96195197-96195216 MsG0580029383.01.T01:intron 35.0%
AATTGACCCCAAGAGATAAA+AGG + Chr5:96197186-96197205 None:intergenic 35.0%
ACATAGCCAAACATCCTAAA+AGG + Chr5:96195970-96195989 None:intergenic 35.0%
ACCGTTGTCTTCAATACTTT+AGG - Chr5:96195231-96195250 MsG0580029383.01.T01:intron 35.0%
AGATCCATATTTGCATGTTC+CGG + Chr5:96196263-96196282 None:intergenic 35.0%
AGGCGAAACCTATTATTGAA+GGG + Chr5:96194403-96194422 None:intergenic 35.0%
ATCTATGGAGTATGCAAGTT+TGG - Chr5:96196675-96196694 MsG0580029383.01.T01:intron 35.0%
ATGGAATAAGAGACCACAAA+AGG + Chr5:96194375-96194394 None:intergenic 35.0%
ATTACAGGTGAAATGTTAGC+AGG + Chr5:96193918-96193937 None:intergenic 35.0%
ATTGACCCCAAGAGATAAAA+GGG + Chr5:96197185-96197204 None:intergenic 35.0%
CAAATTTGATCATCCAGTTG+TGG - Chr5:96196707-96196726 MsG0580029383.01.T01:intron 35.0%
CAATGTTGTTGTATTGTGTG+AGG - Chr5:96193386-96193405 MsG0580029383.01.T01:CDS 35.0%
CATTCAACCCCTTCAATAAT+AGG - Chr5:96194392-96194411 MsG0580029383.01.T01:intron 35.0%
CCGAGAATGTCATATTTATC+TGG - Chr5:96195566-96195585 MsG0580029383.01.T01:intron 35.0%
CTATTATTGAAGGGGTTGAA+TGG + Chr5:96194394-96194413 None:intergenic 35.0%
CTCAAATAATATACGCAGTC+AGG + Chr5:96193852-96193871 None:intergenic 35.0%
CTGACTGCGTATATTATTTG+AGG - Chr5:96193850-96193869 MsG0580029383.01.T01:CDS 35.0%
GCGACATCTAGTAGTAAAAA+TGG + Chr5:96195829-96195848 None:intergenic 35.0%
GGATGATCAAATTTGCATGT+TGG + Chr5:96196702-96196721 None:intergenic 35.0%
GTTTGTGCTATCCTTTCTTT+AGG + Chr5:96196304-96196323 None:intergenic 35.0%
TAAAAGCTTAAAGGGTCATC+AGG - Chr5:96193025-96193044 MsG0580029383.01.T01:three_prime_UTR 35.0%
TGCAGAATTGCAGATCAAAA+GGG + Chr5:96197049-96197068 None:intergenic 35.0%
TGCGTATATTATTTGAGGAC+TGG - Chr5:96193855-96193874 MsG0580029383.01.T01:CDS 35.0%
TGCTAACATTTCACCTGTAA+TGG - Chr5:96193917-96193936 MsG0580029383.01.T01:CDS 35.0%
TTACAGGTGAAATGTTAGCA+GGG + Chr5:96193917-96193936 None:intergenic 35.0%
TTCGTATTGCAGAAGCTATT+CGG - Chr5:96193752-96193771 MsG0580029383.01.T01:CDS 35.0%
TTCTGCAATACGAATCACAA+AGG + Chr5:96193746-96193765 None:intergenic 35.0%
TTGTCAGTTGATTGTTTCGA+TGG + Chr5:96196840-96196859 None:intergenic 35.0%
TTTATCTCTTGGGGTCAATT+TGG - Chr5:96197186-96197205 MsG0580029383.01.T01:five_prime_UTR 35.0%
! CAAAAGACGATTTTCCACAT+TGG + Chr5:96194618-96194637 None:intergenic 35.0%
! CACACATATACTGATTAACC+TGG - Chr5:96195732-96195751 MsG0580029383.01.T01:intron 35.0%
! CTGCAAACTTTGCAACATTT+TGG + Chr5:96192811-96192830 None:intergenic 35.0%
! CTTTTCCCCTTTTATCTCTT+GGG - Chr5:96197176-96197195 MsG0580029383.01.T01:five_prime_UTR 35.0%
! GACAGTTTTTAAACCATACC+AGG + Chr5:96195753-96195772 None:intergenic 35.0%
! TCTTTTCCCCTTTTATCTCT+TGG - Chr5:96197175-96197194 MsG0580029383.01.T01:five_prime_UTR 35.0%
! TGCAGAATTTTCCATCCAAT+TGG - Chr5:96192826-96192845 MsG0580029383.01.T01:three_prime_UTR 35.0%
! TTTTCCCCTTTTATCTCTTG+GGG - Chr5:96197177-96197196 MsG0580029383.01.T01:five_prime_UTR 35.0%
! TTTTGATCTGCAATTCTGCA+GGG - Chr5:96197049-96197068 MsG0580029383.01.T01:intron 35.0%
!! GAACCAGTCTTTTCTTGTTT+AGG - Chr5:96195932-96195951 MsG0580029383.01.T01:CDS 35.0%
!! GCTCTGAAATATTTAGCCTA+GGG - Chr5:96194493-96194512 MsG0580029383.01.T01:intron 35.0%
!! GGAAATATTCCTAGCCTTTT+AGG - Chr5:96195953-96195972 MsG0580029383.01.T01:CDS 35.0%
!!! AGAAAAGACTGGTTCTGTTT+TGG + Chr5:96195927-96195946 None:intergenic 35.0%
!!! GATAGAGGGCATTTTTTTTG+TGG - Chr5:96197120-96197139 MsG0580029383.01.T01:five_prime_UTR 35.0%
AAGAAACTGATGTAGGTCGT+AGG - Chr5:96194553-96194572 MsG0580029383.01.T01:intron 40.0%
AAGAACTTCCTGAGAGAGTT+GGG - Chr5:96194128-96194147 MsG0580029383.01.T01:intron 40.0%
AAGTTATCCTGGAGAGCTTA+TGG - Chr5:96195023-96195042 MsG0580029383.01.T01:intron 40.0%
AATACTGATAGAGTAGGCGA+GGG + Chr5:96196756-96196775 None:intergenic 40.0%
AATGCACTTACAGGTCTCAT+AGG + Chr5:96196352-96196371 None:intergenic 40.0%
ACCAAGACTATGCTCATACA+AGG - Chr5:96194471-96194490 MsG0580029383.01.T01:intron 40.0%
ACCTGATGAAGTAACAGTTG+TGG + Chr5:96195511-96195530 None:intergenic 40.0%
AGACCCAGTTCTCATGTAAT+AGG + Chr5:96195400-96195419 None:intergenic 40.0%
AGATCAAAAGGGGGAATAGA+TGG + Chr5:96197038-96197057 None:intergenic 40.0%
ATTGTATTGGACTGTGAGTG+TGG - Chr5:96193651-96193670 MsG0580029383.01.T01:intron 40.0%
CAAAAGAGAGAGTCCATTAC+AGG + Chr5:96193933-96193952 None:intergenic 40.0%
CAAGTTTCATCATCCACAAC+AGG - Chr5:96195440-96195459 MsG0580029383.01.T01:intron 40.0%
CAGAATTGCAGATCAAAAGG+GGG + Chr5:96197047-96197066 None:intergenic 40.0%
CAGGCGAAACCTATTATTGA+AGG + Chr5:96194404-96194423 None:intergenic 40.0%
CATGAGCACAAAATGTCTGT+AGG - Chr5:96194447-96194466 MsG0580029383.01.T01:intron 40.0%
CCATCTGGTGATAACATTGA+AGG - Chr5:96193139-96193158 MsG0580029383.01.T01:CDS 40.0%
CCTTCAATGTTATCACCAGA+TGG + Chr5:96193142-96193161 None:intergenic 40.0%
CCTTGTGAAGAAGGCAAAAA+AGG + Chr5:96195617-96195636 None:intergenic 40.0%
CTAACAATGAACATGTCCCT+AGG + Chr5:96194512-96194531 None:intergenic 40.0%
CTGCAGAATTGCAGATCAAA+AGG + Chr5:96197050-96197069 None:intergenic 40.0%
CTTATTTCCATAAGCTCTCC+AGG + Chr5:96195033-96195052 None:intergenic 40.0%
GAATGCTGTTCTAATCCATC+TGG - Chr5:96193124-96193143 MsG0580029383.01.T01:exon 40.0%
GACCCAGTTCTCATGTAATA+GGG + Chr5:96195399-96195418 None:intergenic 40.0%
GATGAAGTAACAGTTGTGGA+GGG + Chr5:96195507-96195526 None:intergenic 40.0%
GCAGAATTGCAGATCAAAAG+GGG + Chr5:96197048-96197067 None:intergenic 40.0%
GCATCGAATACTGATAGAGT+AGG + Chr5:96196762-96196781 None:intergenic 40.0%
GGCGAAACCTATTATTGAAG+GGG + Chr5:96194402-96194421 None:intergenic 40.0%
GTCCCTATTACATGAGAACT+GGG - Chr5:96195394-96195413 MsG0580029383.01.T01:intron 40.0%
TACATGCATTCAGTGGTTAC+TGG - Chr5:96196013-96196032 MsG0580029383.01.T01:intron 40.0%
TAGCTTATGGAAACGGCTTA+TGG + Chr5:96195077-96195096 None:intergenic 40.0%
TATTTACAGTCTGGTTGCTC+AGG + Chr5:96196229-96196248 None:intergenic 40.0%
TATTTGAGGACTGGAATGTG+TGG - Chr5:96193864-96193883 MsG0580029383.01.T01:CDS 40.0%
TCACAGTGCAATGAACTTGT+TGG - Chr5:96194880-96194899 MsG0580029383.01.T01:intron 40.0%
TCATGAATCGAATGTGGATG+TGG - Chr5:96194228-96194247 MsG0580029383.01.T01:intron 40.0%
TCGTAACTACATGCATTCAG+TGG - Chr5:96196006-96196025 MsG0580029383.01.T01:intron 40.0%
TGATGAAGTAACAGTTGTGG+AGG + Chr5:96195508-96195527 None:intergenic 40.0%
TGTCCCTATTACATGAGAAC+TGG - Chr5:96195393-96195412 MsG0580029383.01.T01:intron 40.0%
TGTCTACGACTACATGAATC+CGG - Chr5:96196150-96196169 MsG0580029383.01.T01:intron 40.0%
TGTGAAGAAGGCAAAAAAGG+AGG + Chr5:96195614-96195633 None:intergenic 40.0%
TGTGACAATCATGAGCTTGT+GGG - Chr5:96197096-96197115 MsG0580029383.01.T01:intron 40.0%
TGTTAGCAGGGTGATTATAG+CGG + Chr5:96193905-96193924 None:intergenic 40.0%
TTGACCCCAAGAGATAAAAG+GGG + Chr5:96197184-96197203 None:intergenic 40.0%
TTGTGACAATCATGAGCTTG+TGG - Chr5:96197095-96197114 MsG0580029383.01.T01:intron 40.0%
TTGTTTCGATGGAGATGTCT+CGG + Chr5:96196829-96196848 None:intergenic 40.0%
! AGGAGGCACATAAGATTGAA+TGG + Chr5:96195597-96195616 None:intergenic 40.0%
! ATAAAACCAGTAGGCATTGC+AGG + Chr5:96196118-96196137 None:intergenic 40.0%
! CTTTTGATCTGCAATTCTGC+AGG - Chr5:96197048-96197067 MsG0580029383.01.T01:intron 40.0%
! TAAAACCAGTAGGCATTGCA+GGG + Chr5:96196117-96196136 None:intergenic 40.0%
! TCATCAGGTTTTCCATATGC+TGG - Chr5:96195522-96195541 MsG0580029383.01.T01:intron 40.0%
! TCCACAACTGTTACTTCATC+AGG - Chr5:96195507-96195526 MsG0580029383.01.T01:intron 40.0%
!! AAAGCCTTCTTGGACTAGTA+AGG + Chr5:96196791-96196810 None:intergenic 40.0%
!! GGCTCTGAAATATTTAGCCT+AGG - Chr5:96194492-96194511 MsG0580029383.01.T01:intron 40.0%
!! GGGTTGGATAGTTTGTTCAA+TGG - Chr5:96197069-96197088 MsG0580029383.01.T01:intron 40.0%
!! TCTTTCCCCTCGTTTTTGAA+CGG - Chr5:96194201-96194220 MsG0580029383.01.T01:intron 40.0%
!!! CCTTTTTTGCCTTCTTCACA+AGG - Chr5:96195614-96195633 MsG0580029383.01.T01:intron 40.0%
!!! GCAATGCCTACTGGTTTTAT+TGG - Chr5:96196118-96196137 MsG0580029383.01.T01:intron 40.0%
!!! TCCTAGCCTTTTAGGATGTT+TGG - Chr5:96195961-96195980 MsG0580029383.01.T01:CDS 40.0%
AAGTAACAGTTGTGGAGGGA+GGG + Chr5:96195503-96195522 None:intergenic 45.0%
AGAACTGGGTCTTGCAAGTT+TGG - Chr5:96195408-96195427 MsG0580029383.01.T01:intron 45.0%
AGGACTGGAATGTGTGGTTA+CGG - Chr5:96193870-96193889 MsG0580029383.01.T01:CDS 45.0%
AGTTCCACCACCCTAAAGAA+AGG - Chr5:96196290-96196309 MsG0580029383.01.T01:CDS 45.0%
ATTAACCCTGCAATGCCTAC+TGG - Chr5:96196109-96196128 MsG0580029383.01.T01:intron 45.0%
CTCTCCTTACTAGTCCAAGA+AGG - Chr5:96196784-96196803 MsG0580029383.01.T01:intron 45.0%
CTGATGTAGGTCGTAGGATA+CGG - Chr5:96194559-96194578 MsG0580029383.01.T01:intron 45.0%
GAAGAACTTCCTGAGAGAGT+TGG - Chr5:96194127-96194146 MsG0580029383.01.T01:intron 45.0%
GAATACTGATAGAGTAGGCG+AGG + Chr5:96196757-96196776 None:intergenic 45.0%
GATGTACAAACCTGACGCAT+GGG + Chr5:96195261-96195280 None:intergenic 45.0%
GCCAAACATCCTAAAAGGCT+AGG + Chr5:96195965-96195984 None:intergenic 45.0%
GCCTCAATCAATGCCTTATC+CGG - Chr5:96193813-96193832 MsG0580029383.01.T01:CDS 45.0%
GCCTTGTATGAGCATAGTCT+TGG + Chr5:96194475-96194494 None:intergenic 45.0%
GGCATAATGCCTTGTGAAGA+AGG + Chr5:96195626-96195645 None:intergenic 45.0%
GGTGCTTCATGAATCGAATG+TGG - Chr5:96194222-96194241 MsG0580029383.01.T01:intron 45.0%
GTGACAATCATGAGCTTGTG+GGG - Chr5:96197097-96197116 MsG0580029383.01.T01:intron 45.0%
GTGGCTATCTCTCAGAACTA+CGG - Chr5:96196726-96196745 MsG0580029383.01.T01:intron 45.0%
TGACAATCATGAGCTTGTGG+GGG - Chr5:96197098-96197117 MsG0580029383.01.T01:intron 45.0%
TGGACAGTTGAAAGCCTTCT+TGG + Chr5:96196801-96196820 None:intergenic 45.0%
! AAGCACCGTTCAAAAACGAG+GGG + Chr5:96194209-96194228 None:intergenic 45.0%
! AGACGATTTTCCACATTGGC+AGG + Chr5:96194614-96194633 None:intergenic 45.0%
! AGCACCGGAACATGCAAATA+TGG - Chr5:96196256-96196275 MsG0580029383.01.T01:CDS 45.0%
! CAGGTTTTCCATATGCTGGT+GGG - Chr5:96195526-96195545 MsG0580029383.01.T01:intron 45.0%
! GTGCTATCCTTTCTTTAGGG+TGG + Chr5:96196300-96196319 None:intergenic 45.0%
! TCAGGTTTTCCATATGCTGG+TGG - Chr5:96195525-96195544 MsG0580029383.01.T01:intron 45.0%
! TCCTATGTTGGTTGTCTGCA+GGG - Chr5:96196627-96196646 MsG0580029383.01.T01:intron 45.0%
! TTCCTATGTTGGTTGTCTGC+AGG - Chr5:96196626-96196645 MsG0580029383.01.T01:intron 45.0%
! TTCTGAGAGATAGCCACAAC+TGG + Chr5:96196723-96196742 None:intergenic 45.0%
!! ATTTGAGCGCCGAATGTGAT+TGG + Chr5:96195892-96195911 None:intergenic 45.0%
!! CAGTGCAATGAACTTGTTGG+TGG - Chr5:96194883-96194902 MsG0580029383.01.T01:intron 45.0%
!! CTATCCTTTCTTTAGGGTGG+TGG + Chr5:96196297-96196316 None:intergenic 45.0%
!! GAAGCACCGTTCAAAAACGA+GGG + Chr5:96194210-96194229 None:intergenic 45.0%
!! TCCGGATAAGGCATTGATTG+AGG + Chr5:96193817-96193836 None:intergenic 45.0%
!! TGAAGCACCGTTCAAAAACG+AGG + Chr5:96194211-96194230 None:intergenic 45.0%
!!! TTATTTATATTTAATTTCAT+TGG - Chr5:96192938-96192957 MsG0580029383.01.T01:three_prime_UTR 5.0%
AATGCCTTATCCGGATCGAC+TGG - Chr5:96193822-96193841 MsG0580029383.01.T01:CDS 50.0%
ACCTTCGTCCGAGTCTTTAC+AGG - Chr5:96196935-96196954 MsG0580029383.01.T01:CDS 50.0%
AGAGTTGGGCAACCTGATTG+AGG - Chr5:96194142-96194161 MsG0580029383.01.T01:intron 50.0%
AGGTCGTAGGATACGGAATG+AGG - Chr5:96194566-96194585 MsG0580029383.01.T01:intron 50.0%
AGTAACAGTTGTGGAGGGAG+GGG + Chr5:96195502-96195521 None:intergenic 50.0%
ATGAGCTTGTGGGGGATAGA+GGG - Chr5:96197106-96197125 MsG0580029383.01.T01:five_prime_UTR 50.0%
ATGGAGATGTCTCGGTTGGT+TGG + Chr5:96196821-96196840 None:intergenic 50.0%
CACTGGATAAGCTCCTCCAA+AGG + Chr5:96195472-96195491 None:intergenic 50.0%
CATCATCCCAAAGACAGGAG+AGG - Chr5:96195202-96195221 MsG0580029383.01.T01:intron 50.0%
CTACGACTACATGAATCCGG+CGG - Chr5:96196153-96196172 MsG0580029383.01.T01:intron 50.0%
GAAGTAACAGTTGTGGAGGG+AGG + Chr5:96195504-96195523 None:intergenic 50.0%
GATCTGCAATTCTGCAGGGT+TGG - Chr5:96197053-96197072 MsG0580029383.01.T01:intron 50.0%
GGACTGGAATGTGTGGTTAC+GGG - Chr5:96193871-96193890 MsG0580029383.01.T01:CDS 50.0%
GGATGTACAAACCTGACGCA+TGG + Chr5:96195262-96195281 None:intergenic 50.0%
GGTCTCATAGGAAGACCAAG+TGG + Chr5:96196340-96196359 None:intergenic 50.0%
TACGACTACATGAATCCGGC+GGG - Chr5:96196154-96196173 MsG0580029383.01.T01:intron 50.0%
TCCCTGCAGACAACCAACAT+AGG + Chr5:96196631-96196650 None:intergenic 50.0%
TCCTGTAAAGACTCGGACGA+AGG + Chr5:96196939-96196958 None:intergenic 50.0%
TCTGGTTGCTCAGGTCTATC+TGG + Chr5:96196220-96196239 None:intergenic 50.0%
TTCACCAGTCGATCCGGATA+AGG + Chr5:96193829-96193848 None:intergenic 50.0%
TTCGATGGAGATGTCTCGGT+TGG + Chr5:96196825-96196844 None:intergenic 50.0%
TTTAGGTCTTCCCATGCGTC+AGG - Chr5:96195248-96195267 MsG0580029383.01.T01:intron 50.0%
! AGAGACACTTTCTGGTGGAC+AGG - Chr5:96196177-96196196 MsG0580029383.01.T01:intron 50.0%
! CTTTGGAGGAGCTTATCCAG+TGG - Chr5:96195470-96195489 MsG0580029383.01.T01:intron 50.0%
!! ATTCTCGGCATTGACCATGC+AGG + Chr5:96195554-96195573 None:intergenic 50.0%
CAACAGGCAGCTTCCTTTGG+AGG - Chr5:96195456-96195475 MsG0580029383.01.T01:intron 55.0%
CATGAGCTTGTGGGGGATAG+AGG - Chr5:96197105-96197124 MsG0580029383.01.T01:intron 55.0%
CCAAAGGAAGCTGCCTGTTG+TGG + Chr5:96195456-96195475 None:intergenic 55.0%
CCACAACAGGCAGCTTCCTT+TGG - Chr5:96195453-96195472 MsG0580029383.01.T01:intron 55.0%
GCAGCACCTCTCCTGTCTTT+GGG + Chr5:96195211-96195230 None:intergenic 55.0%
GCTGAGCTGGAGCAACTACA+TGG - Chr5:96195649-96195668 MsG0580029383.01.T01:intron 55.0%
GTCAGGTTCACCAGTCGATC+CGG + Chr5:96193835-96193854 None:intergenic 55.0%
TGCAGCACCTCTCCTGTCTT+TGG + Chr5:96195212-96195231 None:intergenic 55.0%
TGCAGGAACCCACCAGCATA+TGG + Chr5:96195537-96195556 None:intergenic 55.0%
TGGAGGAGCTTATCCAGTGG+CGG - Chr5:96195473-96195492 MsG0580029383.01.T01:intron 55.0%
! TCAGGTTGCCCAACTCTCTC+AGG + Chr5:96194139-96194158 None:intergenic 55.0%
!! TATGCTGGTGGGTTCCTGCA+TGG - Chr5:96195537-96195556 MsG0580029383.01.T01:intron 55.0%
GCATTATGCCTGCGCTGAGC+TGG - Chr5:96195636-96195655 MsG0580029383.01.T01:intron 60.0%
GCGGGAGAGACACTTTCTGG+TGG - Chr5:96196172-96196191 MsG0580029383.01.T01:intron 60.0%
TAGTTGCTCCAGCTCAGCGC+AGG + Chr5:96195647-96195666 None:intergenic 60.0%
!! CCAGAAAGTGTCTCTCCCGC+CGG + Chr5:96196172-96196191 None:intergenic 60.0%
CCGGCGGGAGAGACACTTTC+TGG - Chr5:96196169-96196188 MsG0580029383.01.T01:intron 65.0%
! GAGGGAGGGGACGCCGCCAC+TGG + Chr5:96195489-96195508 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr5 gene 96192783 96197311 96192783 ID=MsG0580029383.01;Name=MsG0580029383.01
Chr5 mRNA 96192783 96197311 96192783 ID=MsG0580029383.01.T01;Parent=MsG0580029383.01;Name=MsG0580029383.01.T01;_AED=0.51;_eAED=0.51;_QI=206|0.4|0.66|1|0.6|0.83|6|349|271
Chr5 exon 96192783 96193446 96192783 ID=MsG0580029383.01.T01:exon:36180;Parent=MsG0580029383.01.T01
Chr5 exon 96193734 96193991 96193734 ID=MsG0580029383.01.T01:exon:36179;Parent=MsG0580029383.01.T01
Chr5 exon 96195931 96195987 96195931 ID=MsG0580029383.01.T01:exon:36178;Parent=MsG0580029383.01.T01
Chr5 exon 96196251 96196373 96196251 ID=MsG0580029383.01.T01:exon:36177;Parent=MsG0580029383.01.T01
Chr5 exon 96196934 96196996 96196934 ID=MsG0580029383.01.T01:exon:36176;Parent=MsG0580029383.01.T01
Chr5 exon 96197106 96197311 96197106 ID=MsG0580029383.01.T01:exon:36175;Parent=MsG0580029383.01.T01
Chr5 five_prime_UTR 96197106 96197311 96197106 ID=MsG0580029383.01.T01:five_prime_utr;Parent=MsG0580029383.01.T01
Chr5 CDS 96196934 96196996 96196934 ID=MsG0580029383.01.T01:cds;Parent=MsG0580029383.01.T01
Chr5 CDS 96196251 96196373 96196251 ID=MsG0580029383.01.T01:cds;Parent=MsG0580029383.01.T01
Chr5 CDS 96195931 96195987 96195931 ID=MsG0580029383.01.T01:cds;Parent=MsG0580029383.01.T01
Chr5 CDS 96193734 96193991 96193734 ID=MsG0580029383.01.T01:cds;Parent=MsG0580029383.01.T01
Chr5 CDS 96193132 96193446 96193132 ID=MsG0580029383.01.T01:cds;Parent=MsG0580029383.01.T01
Chr5 three_prime_UTR 96192783 96193131 96192783 ID=MsG0580029383.01.T01:three_prime_utr;Parent=MsG0580029383.01.T01
Gene Sequence

>MsG0580029383.01.T01

ATGCCAGAAAATAGACAAGTTTTCAAGAATGCTGTTCTAATCCATCTGGTGATAACATTGAAGATTGTGCAAGATTTGTCTGATTCCTTTGTGATTCGTATTGCAGAAGCTATTCGGCGTTTGAAAATCAATAGTACTCGAGACAGAGATGCTGTGCCTCAATCAATGCCTTATCCGGATCGACTGATTTCGGTTACTCAATATGTGAAGAACTTCCTGAGAGAGTTGGGCAACCTGATTGAGGGAAGTATTAACCCTGCAATGCCTACTGGTTTTATTGGATCTAATCTTGTCTACGACTACATGAATCCGGCGGGAGAGACACTTTCTGGTGGACAGGTAATGAATTCATCTCTTCCAGATAGACCTGAGCAACCAGACTGTAAATACTTTATGAGCACCGGAACATGCAAATATGGATCTGATTGCAAGTTCCACCACCCTAAAGAAAGGATAGCACAAACATTATCAATTAATCCACTTGGTCTTCCTATGAGACCTGGAAATGCTATATGCTCTTATTACAGAATCTATGGAGTATGCAAGTTTGGTCCAACATGCAAATTTGATCATCCAGTTGTGGCTATCTCTCAGAACTACGGCTTGCCCTCGCCTACTCTATCAGTATTCGATGCATCTCTCCTTACTAGTCCAAGAAGGCTTTCAACTGTCCAACCAACCGAGACATCTCCATCGAAACAATCAACTGACAAGCTTCAACAATCTGATACAAAAGCTGCTACCGAAGATTCATCTAAACAAGCTGACAGTACATCAACTTCTCGCACACCTTCGTCCGAGTCTTTACAGGAATAA
Protein sequence

>MsG0580029383.01.T01

MPENRQVFKNAVLIHLVITLKIVQDLSDSFVIRIAEAIRRLKINSTRDRDAVPQSMPYPDRLISVTQYVKNFLRELGNLIEGSINPAMPTGFIGSNLVYDYMNPAGETLSGGQVMNSSLPDRPEQPDCKYFMSTGTCKYGSDCKFHHPKERIAQTLSINPLGLPMRPGNAICSYYRIYGVCKFGPTCKFDHPVVAISQNYGLPSPTLSVFDASLLTSPRRLSTVQPTETSPSKQSTDKLQQSDTKAATEDSSKQADSTSTSRTPSSESLQE*