AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680030718.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030718.01.T03 MTR_6g011230 75.581 86 17 2 1 83 12 96 7.44e-42 135
MsG0680030718.01.T03 MTR_6g011200 68.605 86 24 1 1 83 10 95 5.29e-41 135
MsG0680030718.01.T03 MTR_6g011250 67.123 73 24 0 1 73 10 82 1.41e-31 108
MsG0680030718.01.T03 MTR_4g099230 63.636 77 28 0 1 77 3 79 4.10e-31 107
MsG0680030718.01.T03 MTR_5g085390 65.432 81 28 0 1 81 10 90 1.33e-28 102
MsG0680030718.01.T03 MTR_4g107450 57.534 73 30 1 1 73 11 82 2.19e-26 98.6
MsG0680030718.01.T03 MTR_8g017090 57.534 73 30 1 1 73 13 84 4.35e-26 97.8
MsG0680030718.01.T03 MTR_3g073690 43.529 85 47 1 1 85 10 93 1.07e-22 87.0
MsG0680030718.01.T03 MTR_5g017950 47.945 73 37 1 1 73 9 80 1.26e-22 89.0
MsG0680030718.01.T03 MTR_7g033800 49.315 73 36 1 1 73 12 83 2.92e-22 85.1
MsG0680030718.01.T03 MTR_4g083680 47.945 73 37 1 1 73 16 87 6.24e-22 84.3
MsG0680030718.01.T03 MTR_6g005070 47.945 73 37 1 1 73 10 81 9.95e-22 82.8
MsG0680030718.01.T03 MTR_6g005080 47.945 73 37 1 1 73 11 82 1.52e-21 82.4
MsG0680030718.01.T03 MTR_2g068760 46.575 73 38 1 1 73 14 85 2.65e-21 82.0
MsG0680030718.01.T03 MTR_8g040900 47.945 73 37 1 1 73 8 79 3.45e-21 83.6
MsG0680030718.01.T03 MTR_3g452660 47.945 73 37 1 1 73 8 79 3.63e-21 84.7
MsG0680030718.01.T03 MTR_2g100020 50.685 73 35 1 1 73 20 91 1.12e-20 83.2
MsG0680030718.01.T03 MTR_3g031660 47.945 73 37 1 1 73 8 79 2.55e-20 80.1
MsG0680030718.01.T03 MTR_3g077240 45.946 74 39 1 1 74 11 83 3.39e-20 80.1
MsG0680030718.01.T03 MTR_5g083230 47.945 73 37 1 1 73 7 78 3.39e-20 79.7
MsG0680030718.01.T03 MTR_4g105170 45.205 73 39 1 1 73 12 83 3.95e-20 79.7
MsG0680030718.01.T03 MTR_3g071590 46.575 73 38 1 1 73 9 80 3.32e-19 76.6
MsG0680030718.01.T03 MTR_2g093310 46.575 73 38 1 1 73 34 105 1.01e-18 76.6
MsG0680030718.01.T03 MTR_7g028905 42.466 73 41 1 1 73 6 77 2.70e-18 73.6
MsG0680030718.01.T03 MTR_5g093010 39.726 73 43 1 1 73 6 77 3.29e-18 73.9
MsG0680030718.01.T03 MTR_5g075020 43.836 73 40 1 1 73 48 119 5.56e-18 75.1
MsG0680030718.01.T03 MTR_5g075020 43.836 73 40 1 1 73 44 115 5.63e-18 75.1
MsG0680030718.01.T03 MTR_5g083960 42.466 73 41 1 1 73 40 111 6.84e-18 74.3
MsG0680030718.01.T03 MTR_4g060950 48.649 74 36 2 1 73 25 97 8.70e-18 73.9
MsG0680030718.01.T03 MTR_1g095850 46.575 73 38 1 1 73 73 144 1.35e-16 71.6
MsG0680030718.01.T03 MTR_5g083010 42.466 73 41 1 1 73 12 83 2.19e-16 70.1
MsG0680030718.01.T03 MTR_3g094690 41.096 73 42 1 1 73 48 119 6.01e-16 70.1
MsG0680030718.01.T03 MTR_3g071420 41.096 73 42 1 1 73 15 86 7.15e-16 68.9
MsG0680030718.01.T03 MTR_8g079660 42.466 73 41 1 1 73 9 80 2.80e-15 68.6
MsG0680030718.01.T03 MTR_4g088035 39.726 73 43 1 1 73 7 78 2.49e-14 65.9
MsG0680030718.01.T03 MTR_3g094690 39.726 73 42 1 1 73 48 118 2.53e-14 65.5
MsG0680030718.01.T03 MTR_7g096530 41.892 74 41 2 1 73 15 87 2.60e-14 65.5
MsG0680030718.01.T03 MTR_6g027710 35.632 87 54 2 1 86 41 126 3.04e-14 65.1
MsG0680030718.01.T03 MTR_8g079620 41.096 73 42 1 1 73 9 80 3.25e-14 65.5
MsG0680030718.01.T03 MTR_8g079580 46.377 69 35 2 1 68 9 76 5.35e-14 64.7
MsG0680030718.01.T03 MTR_6g004550 48.276 58 30 0 28 85 1 58 4.23e-13 60.8
MsG0680030718.01.T03 MTR_8g036105 41.892 74 41 2 1 73 19 91 6.45e-13 61.6
MsG0680030718.01.T03 MTR_7g074990 40.541 74 42 2 1 73 21 93 1.48e-12 60.8
MsG0680030718.01.T03 MTR_1g070205 41.892 74 41 2 1 73 13 85 1.84e-12 60.5
MsG0680030718.01.T03 MTR_5g080470 37.838 74 44 2 1 73 8 80 3.71e-12 59.3
MsG0680030718.01.T03 MTR_1g070220 39.189 74 43 2 1 73 16 88 3.93e-12 59.3
MsG0680030718.01.T03 MTR_7g096610 41.892 74 41 2 1 73 9 81 4.43e-12 59.3
MsG0680030718.01.T03 MTR_8g036085 40.541 74 42 2 1 73 24 96 1.16e-11 58.5
MsG0680030718.01.T01 MTR_6g011230 72.414 87 21 1 8 91 10 96 2.16e-41 135
MsG0680030718.01.T01 MTR_6g011200 75.000 76 18 1 7 81 7 82 1.20e-38 129
MsG0680030718.01.T01 MTR_6g011250 67.123 73 23 1 10 81 10 82 1.73e-29 103
MsG0680030718.01.T01 MTR_4g099230 63.636 77 27 1 10 85 3 79 1.98e-29 103
MsG0680030718.01.T01 MTR_4g107450 58.108 74 31 0 8 81 9 82 3.77e-28 103
MsG0680030718.01.T01 MTR_8g017090 58.108 74 31 0 8 81 11 84 7.31e-28 102
MsG0680030718.01.T01 MTR_5g085390 58.333 84 34 1 7 89 7 90 2.44e-27 100
MsG0680030718.01.T01 MTR_5g017950 48.611 72 37 0 10 81 9 80 2.70e-23 90.9
MsG0680030718.01.T01 MTR_3g073690 46.154 78 42 0 10 87 10 87 2.84e-23 88.6
MsG0680030718.01.T01 MTR_7g033800 48.611 72 37 0 10 81 12 83 1.47e-22 86.3
MsG0680030718.01.T01 MTR_4g083680 48.101 79 37 1 7 81 9 87 1.62e-22 85.9
MsG0680030718.01.T01 MTR_6g005070 47.222 72 38 0 10 81 10 81 3.47e-22 84.3
MsG0680030718.01.T01 MTR_8g040900 48.611 72 37 0 10 81 8 79 4.89e-22 85.9
MsG0680030718.01.T01 MTR_6g005080 47.222 72 38 0 10 81 11 82 4.97e-22 84.0
MsG0680030718.01.T01 MTR_2g068760 46.835 79 38 1 7 81 7 85 5.58e-22 84.3
MsG0680030718.01.T01 MTR_3g452660 48.611 72 37 0 10 81 8 79 7.37e-22 86.7
MsG0680030718.01.T01 MTR_3g077240 43.210 81 46 0 2 82 3 83 1.30e-21 84.3
MsG0680030718.01.T01 MTR_5g083230 48.611 72 37 0 10 81 7 78 1.94e-21 83.2
MsG0680030718.01.T01 MTR_3g031660 48.611 72 37 0 10 81 8 79 2.17e-21 83.2
MsG0680030718.01.T01 MTR_4g105170 43.421 76 43 0 6 81 8 83 2.35e-21 83.6
MsG0680030718.01.T01 MTR_2g100020 49.333 75 38 0 7 81 17 91 2.68e-21 85.1
MsG0680030718.01.T01 MTR_3g071590 47.222 72 38 0 10 81 9 80 1.96e-20 80.5
MsG0680030718.01.T01 MTR_2g093310 47.222 72 38 0 10 81 34 105 2.71e-19 78.2
MsG0680030718.01.T01 MTR_7g028905 43.056 72 41 0 10 81 6 77 3.75e-19 75.9
MsG0680030718.01.T01 MTR_5g093010 40.278 72 43 0 10 81 6 77 4.99e-19 76.3
MsG0680030718.01.T01 MTR_4g060950 49.315 73 36 1 10 81 25 97 1.38e-18 76.3
MsG0680030718.01.T01 MTR_5g083960 41.667 72 42 0 10 81 40 111 5.41e-18 74.7
MsG0680030718.01.T01 MTR_5g083010 39.241 79 48 0 3 81 5 83 1.71e-17 73.2
MsG0680030718.01.T01 MTR_1g095850 47.222 72 38 0 10 81 73 144 2.14e-17 73.9
MsG0680030718.01.T01 MTR_5g075020 41.667 72 42 0 10 81 44 115 5.16e-17 72.8
MsG0680030718.01.T01 MTR_5g075020 41.667 72 42 0 10 81 48 119 5.64e-17 72.8
MsG0680030718.01.T01 MTR_3g071420 37.975 79 49 0 3 81 8 86 8.99e-17 71.6
MsG0680030718.01.T01 MTR_8g079660 41.667 72 42 0 10 81 9 80 6.22e-16 70.5
MsG0680030718.01.T01 MTR_3g094690 37.500 88 45 1 4 81 32 119 6.41e-16 70.1
MsG0680030718.01.T01 MTR_8g079620 41.667 72 42 0 10 81 9 80 2.32e-15 68.6
MsG0680030718.01.T01 MTR_8g079580 45.588 68 36 1 10 76 9 76 2.43e-15 68.6
MsG0680030718.01.T01 MTR_7g096530 42.466 73 41 1 10 81 15 87 3.15e-15 68.2
MsG0680030718.01.T01 MTR_4g088035 35.955 89 57 0 6 94 3 91 5.25e-15 68.2
MsG0680030718.01.T01 MTR_6g027710 36.905 84 52 1 10 92 41 124 6.47e-15 67.4
MsG0680030718.01.T01 MTR_3g094690 37.500 88 44 2 4 81 32 118 8.31e-15 67.4
MsG0680030718.01.T01 MTR_8g036105 40.741 81 47 1 2 81 11 91 2.68e-14 65.5
MsG0680030718.01.T01 MTR_5g080470 38.356 73 44 1 10 81 8 80 8.97e-13 61.2
MsG0680030718.01.T01 MTR_1g070220 38.356 73 44 1 10 81 16 88 1.51e-12 60.8
MsG0680030718.01.T01 MTR_1g070205 41.096 73 42 1 10 81 13 85 1.70e-12 60.8
MsG0680030718.01.T01 MTR_8g036085 39.726 73 43 1 10 81 24 96 2.32e-12 60.5
MsG0680030718.01.T01 MTR_7g096610 41.096 73 42 1 10 81 9 81 3.23e-12 60.1
MsG0680030718.01.T01 MTR_7g074990 39.726 73 43 1 10 81 21 93 5.06e-12 59.7
MsG0680030718.01.T01 MTR_6g027700 35.616 73 46 1 10 81 8 80 2.48e-11 57.4
MsG0680030718.01.T02 MTR_6g011230 75.862 87 16 2 1 84 12 96 1.55e-42 137
MsG0680030718.01.T02 MTR_6g011200 63.218 87 28 2 1 84 10 95 2.99e-36 122
MsG0680030718.01.T02 MTR_4g099230 62.821 78 28 1 1 78 3 79 3.06e-30 105
MsG0680030718.01.T02 MTR_6g011250 63.514 74 26 1 1 74 10 82 1.76e-29 103
MsG0680030718.01.T02 MTR_5g085390 59.756 82 32 1 1 82 10 90 3.42e-27 99.4
MsG0680030718.01.T02 MTR_8g017090 56.757 74 30 1 1 74 13 84 1.28e-26 99.4
MsG0680030718.01.T02 MTR_4g107450 56.757 74 30 1 1 74 11 82 1.25e-25 96.7
MsG0680030718.01.T02 MTR_5g017950 45.946 74 38 1 1 74 9 80 1.14e-21 86.3
MsG0680030718.01.T02 MTR_4g083680 45.946 74 38 1 1 74 16 87 2.27e-21 82.8
MsG0680030718.01.T02 MTR_2g100020 48.649 74 36 1 1 74 20 91 4.46e-21 84.3
MsG0680030718.01.T02 MTR_7g033800 45.946 74 38 1 1 74 12 83 6.51e-21 81.6
MsG0680030718.01.T02 MTR_2g068760 44.595 74 39 1 1 74 14 85 1.13e-20 80.5
MsG0680030718.01.T02 MTR_3g452660 44.595 74 39 1 1 74 8 79 1.84e-20 82.8
MsG0680030718.01.T02 MTR_6g005070 44.595 74 39 1 1 74 10 81 2.59e-20 79.3
MsG0680030718.01.T02 MTR_3g073690 39.535 86 50 1 1 86 10 93 4.35e-20 80.1
MsG0680030718.01.T02 MTR_3g031660 45.946 74 38 1 1 74 8 79 4.44e-20 79.7
MsG0680030718.01.T02 MTR_6g005080 44.595 74 39 1 1 74 11 82 4.82e-20 78.6
MsG0680030718.01.T02 MTR_8g040900 44.595 74 39 1 1 74 8 79 5.27e-20 80.5
MsG0680030718.01.T02 MTR_5g083230 44.595 74 39 1 1 74 7 78 7.83e-20 78.6
MsG0680030718.01.T02 MTR_3g071590 44.595 74 39 1 1 74 9 80 2.84e-19 77.0
MsG0680030718.01.T02 MTR_7g028905 40.541 74 42 1 1 74 6 77 5.03e-19 75.1
MsG0680030718.01.T02 MTR_3g077240 42.667 75 41 1 1 75 11 83 8.12e-19 76.6
MsG0680030718.01.T02 MTR_4g105170 41.892 74 41 1 1 74 12 83 9.49e-19 76.3
MsG0680030718.01.T02 MTR_5g093010 36.842 76 46 1 1 76 6 79 9.97e-19 75.1
MsG0680030718.01.T02 MTR_2g093310 44.595 74 39 1 1 74 34 105 1.28e-17 73.6
MsG0680030718.01.T02 MTR_5g083960 41.892 74 41 1 1 74 40 111 1.72e-17 73.2
MsG0680030718.01.T02 MTR_4g060950 45.333 75 38 2 1 74 25 97 2.80e-16 70.1
MsG0680030718.01.T02 MTR_5g075020 40.541 74 42 1 1 74 44 115 6.93e-16 69.7
MsG0680030718.01.T02 MTR_5g075020 40.541 74 42 1 1 74 48 119 7.09e-16 69.7
MsG0680030718.01.T02 MTR_5g083010 41.892 74 41 1 1 74 12 83 8.91e-16 68.6
MsG0680030718.01.T02 MTR_1g095850 44.595 74 39 1 1 74 73 144 1.35e-15 68.9
MsG0680030718.01.T02 MTR_3g094690 40.541 74 42 1 1 74 48 119 2.01e-15 68.6
MsG0680030718.01.T02 MTR_3g071420 39.189 74 43 1 1 74 15 86 5.78e-15 66.6
MsG0680030718.01.T02 MTR_8g079660 40.541 74 42 1 1 74 9 80 5.61e-14 65.1
MsG0680030718.01.T02 MTR_8g079620 39.189 74 43 1 1 74 9 80 5.91e-14 64.7
MsG0680030718.01.T02 MTR_8g079580 42.857 70 37 2 1 69 9 76 7.50e-14 64.3
MsG0680030718.01.T02 MTR_4g088035 37.838 74 44 1 1 74 7 78 9.19e-14 64.3
MsG0680030718.01.T02 MTR_3g094690 37.838 74 43 1 1 74 48 118 1.21e-13 63.9
MsG0680030718.01.T02 MTR_6g027710 34.091 88 55 2 1 87 41 126 2.03e-13 63.2
MsG0680030718.01.T02 MTR_7g096530 40.000 75 42 2 1 74 15 87 4.42e-13 62.0
MsG0680030718.01.T02 MTR_8g036105 40.000 75 42 2 1 74 19 91 1.09e-12 60.8
MsG0680030718.01.T02 MTR_5g080470 37.333 75 44 2 1 74 8 80 1.92e-12 60.1
MsG0680030718.01.T02 MTR_8g036085 38.667 75 43 2 1 74 24 96 1.12e-11 58.5
MsG0680030718.01.T02 MTR_1g070205 38.667 75 43 2 1 74 13 85 1.91e-11 57.8
MsG0680030718.01.T02 MTR_6g027700 37.333 75 44 2 1 74 8 80 3.01e-11 57.0
MsG0680030718.01.T02 MTR_1g070220 36.000 75 45 2 1 74 16 88 3.55e-11 57.0
MsG0680030718.01.T02 MTR_7g096610 33.721 86 54 2 1 85 9 92 4.09e-11 57.0
MsG0680030718.01.T02 MTR_7g074990 37.333 75 44 2 1 74 21 93 5.56e-11 56.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680030718.01.T03 AT3G47870 54.545 77 34 1 1 77 37 112 1.55e-25 96.7
MsG0680030718.01.T03 AT3G13850 57.534 73 30 1 1 73 37 108 3.25e-24 92.4
MsG0680030718.01.T03 AT3G27650 50.685 73 35 1 1 73 40 111 7.45e-23 86.3
MsG0680030718.01.T03 AT1G31320 47.945 73 37 1 1 73 14 85 1.53e-21 83.2
MsG0680030718.01.T03 AT1G72980 51.316 76 36 1 1 76 14 88 1.95e-21 84.0
MsG0680030718.01.T03 AT5G66870 45.205 73 39 1 1 73 8 79 2.43e-21 85.5
MsG0680030718.01.T03 AT1G65620 46.575 73 38 1 1 73 10 81 5.01e-21 82.4
MsG0680030718.01.T03 AT1G65620 46.575 73 38 1 1 73 10 81 5.01e-21 82.4
MsG0680030718.01.T03 AT1G65620 46.575 73 38 1 1 73 10 81 5.01e-21 82.4
MsG0680030718.01.T03 AT1G65620 46.575 73 38 1 1 73 10 81 5.01e-21 82.4
MsG0680030718.01.T03 AT1G65620 46.575 73 38 1 1 73 10 81 5.01e-21 82.4
MsG0680030718.01.T03 AT3G26620 46.575 73 38 1 1 73 6 77 5.33e-21 80.5
MsG0680030718.01.T03 AT3G26660 46.575 73 38 1 1 73 6 77 5.57e-21 80.5
MsG0680030718.01.T03 AT5G15060 45.570 79 42 1 1 78 18 96 7.57e-20 78.2
MsG0680030718.01.T03 AT2G30130 47.945 73 37 1 1 73 9 80 1.07e-19 79.0
MsG0680030718.01.T03 AT5G63090 43.836 73 40 1 1 73 12 83 1.60e-19 78.2
MsG0680030718.01.T03 AT5G63090 43.836 73 40 1 1 73 12 83 1.60e-19 78.2
MsG0680030718.01.T03 AT5G63090 43.836 73 40 1 1 73 12 83 1.60e-19 78.2
MsG0680030718.01.T03 AT5G63090 43.836 73 40 1 1 73 12 83 1.60e-19 78.2
MsG0680030718.01.T03 AT2G23660 46.575 73 38 1 1 73 6 77 4.16e-19 79.3
MsG0680030718.01.T03 AT2G23660 46.575 73 38 1 1 73 6 77 4.16e-19 79.3
MsG0680030718.01.T03 AT2G23660 46.575 73 38 1 1 73 6 77 4.16e-19 79.3
MsG0680030718.01.T03 AT1G07900 46.575 73 38 1 1 73 34 105 5.45e-18 74.3
MsG0680030718.01.T03 AT1G06280 43.243 74 41 1 1 74 25 97 1.31e-17 73.9
MsG0680030718.01.T03 AT2G30340 42.466 73 41 1 1 73 54 125 2.46e-17 73.9
MsG0680030718.01.T03 AT2G30340 42.466 73 41 1 1 73 53 124 2.54e-17 73.9
MsG0680030718.01.T03 AT2G28500 46.575 73 38 1 1 73 56 127 2.86e-17 73.6
MsG0680030718.01.T03 AT1G16530 44.595 74 39 2 1 73 15 87 3.35e-17 72.0
MsG0680030718.01.T03 AT2G40470 41.096 73 42 1 1 73 21 92 4.98e-17 72.0
MsG0680030718.01.T03 AT2G40470 41.096 73 42 1 1 73 46 117 8.98e-17 72.0
MsG0680030718.01.T03 AT3G11090 38.356 73 44 1 1 73 12 83 1.04e-15 68.2
MsG0680030718.01.T03 AT3G50510 37.662 77 47 1 1 77 13 88 1.28e-15 68.6
MsG0680030718.01.T03 AT3G50510 37.662 77 47 1 1 77 13 88 1.28e-15 68.6
MsG0680030718.01.T03 AT2G19820 44.615 65 36 0 1 65 13 77 1.05e-14 64.3
MsG0680030718.01.T03 AT2G42430 43.243 74 40 2 1 73 16 88 3.02e-14 65.5
MsG0680030718.01.T03 AT3G03760 37.838 74 44 2 1 73 52 124 8.79e-13 62.0
MsG0680030718.01.T03 AT4G00220 35.294 85 53 2 3 86 20 103 2.89e-12 60.1
MsG0680030718.01.T03 AT3G58190 43.243 74 40 2 1 73 12 84 2.93e-12 60.1
MsG0680030718.01.T03 AT2G31310 40.541 74 42 2 1 73 8 80 3.99e-12 58.9
MsG0680030718.01.T03 AT2G42440 41.892 74 41 2 1 73 8 80 4.51e-12 59.7
MsG0680030718.01.T03 AT5G06080 39.189 74 43 2 1 73 8 80 5.87e-12 58.5
MsG0680030718.01.T03 AT5G35900 32.500 80 53 1 1 80 6 84 7.41e-11 55.8
MsG0680030718.01.T03 AT2G45420 38.889 72 42 2 3 73 40 110 9.55e-11 56.2
MsG0680030718.01.T01 AT3G13850 58.108 74 31 0 8 81 35 108 4.98e-26 97.4
MsG0680030718.01.T01 AT3G47870 54.545 77 35 0 9 85 36 112 6.12e-26 98.2
MsG0680030718.01.T01 AT3G27650 50.000 72 36 0 10 81 40 111 2.08e-23 87.8
MsG0680030718.01.T01 AT1G31320 48.101 79 37 1 7 81 7 85 1.19e-22 86.3
MsG0680030718.01.T01 AT1G65620 47.222 72 38 0 10 81 10 81 4.75e-22 85.5
MsG0680030718.01.T01 AT1G65620 47.222 72 38 0 10 81 10 81 4.75e-22 85.5
MsG0680030718.01.T01 AT1G65620 47.222 72 38 0 10 81 10 81 4.75e-22 85.5
MsG0680030718.01.T01 AT1G65620 47.222 72 38 0 10 81 10 81 4.75e-22 85.5
MsG0680030718.01.T01 AT1G65620 47.222 72 38 0 10 81 10 81 4.75e-22 85.5
MsG0680030718.01.T01 AT5G66870 45.833 72 39 0 10 81 8 79 6.61e-22 87.4
MsG0680030718.01.T01 AT1G72980 51.316 76 37 0 9 84 13 88 8.71e-22 85.1
MsG0680030718.01.T01 AT3G26660 45.833 72 39 0 10 81 6 77 3.05e-21 81.3
MsG0680030718.01.T01 AT3G26620 45.833 72 39 0 10 81 6 77 3.19e-21 81.3
MsG0680030718.01.T01 AT2G30130 48.611 72 37 0 10 81 9 80 5.93e-21 82.4
MsG0680030718.01.T01 AT5G63090 41.250 80 47 0 2 81 4 83 8.93e-21 82.0
MsG0680030718.01.T01 AT5G63090 41.250 80 47 0 2 81 4 83 8.93e-21 82.0
MsG0680030718.01.T01 AT5G63090 41.250 80 47 0 2 81 4 83 8.93e-21 82.0
MsG0680030718.01.T01 AT5G63090 41.250 80 47 0 2 81 4 83 8.93e-21 82.0
MsG0680030718.01.T01 AT2G23660 47.222 72 38 0 10 81 6 77 9.01e-20 81.6
MsG0680030718.01.T01 AT2G23660 47.222 72 38 0 10 81 6 77 9.01e-20 81.6
MsG0680030718.01.T01 AT2G23660 47.222 72 38 0 10 81 6 77 9.01e-20 81.6
MsG0680030718.01.T01 AT1G16530 42.353 85 43 2 3 81 3 87 7.09e-19 76.6
MsG0680030718.01.T01 AT5G15060 45.570 79 41 1 10 86 18 96 8.91e-19 75.5
MsG0680030718.01.T01 AT1G07900 47.222 72 38 0 10 81 34 105 1.23e-18 76.6
MsG0680030718.01.T01 AT2G28500 47.222 72 38 0 10 81 56 127 6.86e-18 75.5
MsG0680030718.01.T01 AT1G06280 41.333 75 44 0 8 82 23 97 2.79e-17 73.2
MsG0680030718.01.T01 AT2G40470 40.278 72 43 0 10 81 21 92 5.71e-17 72.4
MsG0680030718.01.T01 AT2G40470 40.278 72 43 0 10 81 46 117 8.44e-17 72.4
MsG0680030718.01.T01 AT3G11090 35.443 79 51 0 3 81 5 83 1.36e-16 70.5
MsG0680030718.01.T01 AT3G50510 38.158 76 47 0 10 85 13 88 1.43e-16 71.2
MsG0680030718.01.T01 AT3G50510 38.158 76 47 0 10 85 13 88 1.43e-16 71.2
MsG0680030718.01.T01 AT2G30340 41.667 72 42 0 10 81 53 124 1.47e-16 72.4
MsG0680030718.01.T01 AT2G30340 41.667 72 42 0 10 81 54 125 1.47e-16 72.4
MsG0680030718.01.T01 AT2G42430 41.096 73 42 1 10 81 16 88 4.25e-14 65.5
MsG0680030718.01.T01 AT2G19820 46.154 65 34 1 10 73 13 77 7.70e-14 62.4
MsG0680030718.01.T01 AT5G06080 38.961 77 46 1 6 81 4 80 1.15e-13 63.2
MsG0680030718.01.T01 AT3G03760 33.333 84 55 1 10 92 52 135 2.12e-13 63.9
MsG0680030718.01.T01 AT5G35900 32.911 79 53 0 10 88 6 84 2.57e-12 60.1
MsG0680030718.01.T01 AT2G42440 41.096 73 42 1 10 81 8 80 2.64e-12 60.5
MsG0680030718.01.T01 AT4G00220 40.845 71 41 1 12 81 20 90 2.72e-12 60.5
MsG0680030718.01.T01 AT3G58190 42.466 73 41 1 10 81 12 84 3.44e-12 60.1
MsG0680030718.01.T01 AT4G00210 38.356 73 44 1 10 81 12 84 1.16e-11 58.5
MsG0680030718.01.T01 AT2G45420 39.437 71 42 1 12 81 40 110 1.34e-11 58.9
MsG0680030718.01.T01 AT2G31310 38.356 73 44 1 10 81 8 80 2.74e-11 57.4
MsG0680030718.01.T02 AT3G47870 53.846 78 34 1 1 78 37 112 5.09e-25 95.5
MsG0680030718.01.T02 AT3G13850 58.108 74 29 1 1 74 37 108 4.54e-24 92.0
MsG0680030718.01.T02 AT1G31320 45.946 74 38 1 1 74 14 85 1.52e-21 83.2
MsG0680030718.01.T02 AT3G27650 47.297 74 37 1 1 74 40 111 1.73e-21 82.8
MsG0680030718.01.T02 AT5G15060 46.835 79 42 0 1 79 18 96 3.20e-21 81.6
MsG0680030718.01.T02 AT1G72980 49.351 77 37 1 1 77 14 88 1.59e-20 81.6
MsG0680030718.01.T02 AT5G66870 43.243 74 40 1 1 74 8 79 1.96e-20 83.2
MsG0680030718.01.T02 AT3G26620 43.243 74 40 1 1 74 6 77 2.90e-20 78.6
MsG0680030718.01.T02 AT3G26660 43.243 74 40 1 1 74 6 77 2.96e-20 78.6
MsG0680030718.01.T02 AT1G65620 43.243 74 40 1 1 74 10 81 8.33e-20 79.3
MsG0680030718.01.T02 AT1G65620 43.243 74 40 1 1 74 10 81 8.33e-20 79.3
MsG0680030718.01.T02 AT1G65620 43.243 74 40 1 1 74 10 81 8.33e-20 79.3
MsG0680030718.01.T02 AT1G65620 43.243 74 40 1 1 74 10 81 8.33e-20 79.3
MsG0680030718.01.T02 AT1G65620 43.243 74 40 1 1 74 10 81 8.33e-20 79.3
MsG0680030718.01.T02 AT2G30130 44.595 74 39 1 1 74 9 80 2.16e-19 78.2
MsG0680030718.01.T02 AT5G63090 40.541 74 42 1 1 74 12 83 5.35e-18 74.3
MsG0680030718.01.T02 AT5G63090 40.541 74 42 1 1 74 12 83 5.35e-18 74.3
MsG0680030718.01.T02 AT5G63090 40.541 74 42 1 1 74 12 83 5.35e-18 74.3
MsG0680030718.01.T02 AT5G63090 40.541 74 42 1 1 74 12 83 5.35e-18 74.3
MsG0680030718.01.T02 AT1G16530 45.333 75 38 2 1 74 15 87 1.82e-17 72.4
MsG0680030718.01.T02 AT1G06280 42.105 76 42 1 1 76 25 98 3.99e-17 72.4
MsG0680030718.01.T02 AT2G23660 41.892 74 41 1 1 74 6 77 4.72e-17 73.9
MsG0680030718.01.T02 AT2G23660 41.892 74 41 1 1 74 6 77 4.72e-17 73.9
MsG0680030718.01.T02 AT2G23660 41.892 74 41 1 1 74 6 77 4.72e-17 73.9
MsG0680030718.01.T02 AT1G07900 44.595 74 39 1 1 74 34 105 5.56e-17 72.0
MsG0680030718.01.T02 AT2G28500 44.595 74 39 1 1 74 56 127 1.81e-16 71.2
MsG0680030718.01.T02 AT2G30340 40.541 74 42 1 1 74 54 125 2.03e-16 71.6
MsG0680030718.01.T02 AT2G30340 40.541 74 42 1 1 74 53 124 2.77e-16 71.2
MsG0680030718.01.T02 AT2G40470 37.179 78 47 1 1 78 21 96 6.68e-16 69.3
MsG0680030718.01.T02 AT2G40470 39.189 74 43 1 1 74 46 117 1.14e-15 68.9
MsG0680030718.01.T02 AT3G11090 37.838 74 44 1 1 74 12 83 4.72e-15 66.2
MsG0680030718.01.T02 AT3G50510 34.615 78 49 1 1 78 13 88 5.64e-14 64.3
MsG0680030718.01.T02 AT3G50510 34.615 78 49 1 1 78 13 88 5.64e-14 64.3
MsG0680030718.01.T02 AT2G42430 41.333 75 41 2 1 74 16 88 9.48e-14 64.3
MsG0680030718.01.T02 AT3G03760 37.333 75 44 2 1 74 52 124 7.98e-13 62.0
MsG0680030718.01.T02 AT2G19820 40.909 66 38 1 1 66 13 77 3.05e-12 58.2
MsG0680030718.01.T02 AT4G00220 34.884 86 53 2 3 87 20 103 4.86e-12 59.3
MsG0680030718.01.T02 AT2G42440 40.000 75 42 2 1 74 8 80 1.02e-11 58.9
MsG0680030718.01.T02 AT3G58190 41.333 75 41 2 1 74 12 84 2.02e-11 57.8
MsG0680030718.01.T02 AT5G06080 36.000 75 45 2 1 74 8 80 6.58e-11 55.8
MsG0680030718.01.T02 AT2G45420 36.986 73 43 2 3 74 40 110 7.03e-11 56.6

Find 18 sgRNAs with CRISPR-Local

Find 253 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCTTCTTTGGAATTTGC+AGG 0.258062 6:+7816469 None:intergenic
GGTTTATCAGCAGGAAAATA+AGG 0.329247 6:+7816422 None:intergenic
TCGTGCAAATTTCCCAATCA+TGG 0.372983 6:-7812094 MsG0680030718.01.T01:CDS
CTTTAATATCTTCGATATGT+TGG 0.391762 6:+7816361 None:intergenic
AGCAATGAAATCAATTGTTA+TGG 0.416539 6:-7812127 MsG0680030718.01.T01:CDS
GGCAACGCTCATCGTTTGTT+CGG 0.441079 6:-7816389 MsG0680030718.01.T01:CDS
AACACCAAGACATCCATGAT+TGG 0.444830 6:+7812081 None:intergenic
GAAGATATTAAAGCAAGTTA+AGG 0.448622 6:-7816351 MsG0680030718.01.T01:intron
AACACTTGTGGTTTATCAGC+AGG 0.459111 6:+7816413 None:intergenic
TTTCCCAATCATGGATGTCT+TGG 0.459741 6:-7812085 MsG0680030718.01.T01:CDS
ACACCAAGACATCCATGATT+GGG 0.496125 6:+7812082 None:intergenic
GCTGATAAACCACAAGTGTT+CGG 0.498732 6:-7816410 MsG0680030718.01.T01:CDS
TGGTGTTATTCATATGTATG+CGG 0.556141 6:-7812065 MsG0680030718.01.T01:CDS
GGTGTTATTCATATGTATGC+GGG 0.561686 6:-7812064 MsG0680030718.01.T01:CDS
TGAGCGTTGCCGAACACTTG+TGG 0.583347 6:+7816401 None:intergenic
GATACTAAACGAAATAAGGA+TGG 0.605235 6:-7812165 MsG0680030718.01.T01:intron
TCACAGAGGAGACACAAGCA+AGG 0.685280 6:-7816500 MsG0680030718.01.T01:CDS
GTACCTAATGAATATCACAG+AGG 0.815761 6:-7816514 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAATTAATTAATTAATT+AGG - Chr6:7815985-7816004 MsG0680030718.01.T01:intron 0.0%
!! TTATTATTATTATATATTTA+AGG - Chr6:7813999-7814018 MsG0680030718.01.T01:intron 0.0%
!!! AATTTTAATTATTATTATTT+TGG - Chr6:7812761-7812780 MsG0680030718.01.T01:intron 0.0%
!!! ATTTTAATTATTATTATTTT+GGG - Chr6:7812762-7812781 MsG0680030718.01.T01:intron 0.0%
!! AAACATTTAAAAAATTAAAC+GGG + Chr6:7814594-7814613 None:intergenic 10.0%
!! ACTCAAAAAATAAAAATATT+TGG + Chr6:7815357-7815376 None:intergenic 10.0%
!! ATGAATCAAATTTATTAAAA+TGG - Chr6:7814848-7814867 MsG0680030718.01.T01:intron 10.0%
!! GAAACATTTAAAAAATTAAA+CGG + Chr6:7814595-7814614 None:intergenic 10.0%
!! TTTGCTAAAAAATTTATTAT+AGG + Chr6:7813069-7813088 None:intergenic 10.0%
!!! ATTTTATAAAAAGAAACAAA+TGG - Chr6:7815042-7815061 MsG0680030718.01.T01:intron 10.0%
!!! CATATATGAATATTTTTTTA+GGG - Chr6:7815477-7815496 MsG0680030718.01.T01:intron 10.0%
!!! TATTTATTTTTTTGTTAATG+AGG + Chr6:7814050-7814069 None:intergenic 10.0%
!!! TCATATATGAATATTTTTTT+AGG - Chr6:7815476-7815495 MsG0680030718.01.T01:intron 10.0%
!!! TTTTATAAAAAGAAACAAAT+GGG - Chr6:7815043-7815062 MsG0680030718.01.T01:intron 10.0%
!!! TTTTTAACACTTAAAATTTT+TGG - Chr6:7813734-7813753 MsG0680030718.01.T01:intron 10.0%
!! AAAAAATAACAATAAGTTAG+TGG + Chr6:7814293-7814312 None:intergenic 15.0%
!! AAAAAATTTATTATAGGTCT+GGG + Chr6:7813063-7813082 None:intergenic 15.0%
!! AACATTTAAAAAATTAAACG+GGG + Chr6:7814593-7814612 None:intergenic 15.0%
!! ACATAAATATGAATTAAGAT+AGG - Chr6:7815293-7815312 MsG0680030718.01.T01:intron 15.0%
!! ATAATACTTTCAAACATATT+TGG + Chr6:7815013-7815032 None:intergenic 15.0%
!! TAAAAAATTTATTATAGGTC+TGG + Chr6:7813064-7813083 None:intergenic 15.0%
!! TAAAGATATGTAATTAATGA+AGG + Chr6:7812874-7812893 None:intergenic 15.0%
!! TAAATAATACGAAAATAACA+AGG - Chr6:7815603-7815622 MsG0680030718.01.T01:intron 15.0%
!! TAATACTTTCAAACATATTT+GGG + Chr6:7815012-7815031 None:intergenic 15.0%
!! TACATATCTTTAATCAATAT+AGG - Chr6:7812882-7812901 MsG0680030718.01.T01:intron 15.0%
!! TTAATTCATATTTATGTACT+CGG + Chr6:7815290-7815309 None:intergenic 15.0%
!!! TAGTACAAAATTTGATTTAA+GGG - Chr6:7812679-7812698 MsG0680030718.01.T01:intron 15.0%
!!! TAGTTTTATAATTCTATACA+TGG - Chr6:7813560-7813579 MsG0680030718.01.T01:intron 15.0%
!!! TATAAGTTCTTTTATTTCAA+AGG - Chr6:7813772-7813791 MsG0680030718.01.T01:intron 15.0%
!!! TGATGGTTATTAATAATTTT+AGG + Chr6:7815245-7815264 None:intergenic 15.0%
!!! TGATTTCATTAATTTGTAAA+TGG - Chr6:7814706-7814725 MsG0680030718.01.T01:intron 15.0%
!!! TGGATTTTTTTTTTTTGATA+TGG + Chr6:7815386-7815405 None:intergenic 15.0%
!!! TTGTTTCTTTTTATAAAATG+CGG + Chr6:7815041-7815060 None:intergenic 15.0%
!!! TTTAACATTTTAACCTAAAA+AGG - Chr6:7813214-7813233 MsG0680030718.01.T01:intron 15.0%
!!! TTTTTTTATCAATGTCAAAA+GGG - Chr6:7815776-7815795 MsG0680030718.01.T01:intron 15.0%
!!! TTTTTTTTATCAATGTCAAA+AGG - Chr6:7815775-7815794 MsG0680030718.01.T01:intron 15.0%
!! AATTACAAACAAAAGTAAAC+CGG - Chr6:7814542-7814561 MsG0680030718.01.T01:intron 20.0%
!! ACATCAAAACTAATCAAATT+AGG - Chr6:7813409-7813428 MsG0680030718.01.T01:intron 20.0%
!! ACATTTAAAAAATTAAACGG+GGG + Chr6:7814592-7814611 None:intergenic 20.0%
!! ATCAAAACTAATCAAATTAG+GGG - Chr6:7813411-7813430 MsG0680030718.01.T01:intron 20.0%
!! ATTCTTACTAGATTATTGTA+AGG - Chr6:7812367-7812386 MsG0680030718.01.T01:intron 20.0%
!! CATCAAAACTAATCAAATTA+GGG - Chr6:7813410-7813429 MsG0680030718.01.T01:intron 20.0%
!! GAAAAAAAAATCATGTCAAA+GGG - Chr6:7815804-7815823 MsG0680030718.01.T01:intron 20.0%
!! GATGTTATTATGATGTATTA+TGG - Chr6:7812306-7812325 MsG0680030718.01.T01:intron 20.0%
!! GATTAGATTATGTTTATTTC+AGG - Chr6:7813861-7813880 MsG0680030718.01.T01:intron 20.0%
!! TAAAAGAACTTATATTCACA+AGG + Chr6:7813766-7813785 None:intergenic 20.0%
!! TAATTCATATTTATGTACTC+GGG + Chr6:7815289-7815308 None:intergenic 20.0%
!! TCACTAAACATAACATAAAT+GGG + Chr6:7814623-7814642 None:intergenic 20.0%
!! TCAGTAATGATAAGTTAAAA+TGG + Chr6:7815222-7815241 None:intergenic 20.0%
!! TTATTAAAATGGAGATATGA+AGG - Chr6:7814859-7814878 MsG0680030718.01.T01:intron 20.0%
!! TTTATGTGTTTCAATTACAA+TGG + Chr6:7815406-7815425 None:intergenic 20.0%
!! TTTCGTATTATTTAGATACA+AGG + Chr6:7815597-7815616 None:intergenic 20.0%
!!! AAAATTTGATTTAAGGGAAA+AGG - Chr6:7812685-7812704 MsG0680030718.01.T01:intron 20.0%
!!! AAGTTTTTCCTTATGAATTT+TGG - Chr6:7815630-7815649 MsG0680030718.01.T01:intron 20.0%
!!! ACTCACTTTTTTTTTTTTGA+AGG - Chr6:7815830-7815849 MsG0680030718.01.T01:intron 20.0%
!!! ACTTTTTTTTTTTTGAAGGA+AGG - Chr6:7815834-7815853 MsG0680030718.01.T01:intron 20.0%
!!! AGACTTTGAAACTAATTTTA+TGG - Chr6:7812527-7812546 MsG0680030718.01.T01:intron 20.0%
!!! CTTTGACATGATTTTTTTTT+CGG + Chr6:7815805-7815824 None:intergenic 20.0%
!!! GAAATCAATTATTTTTGAGT+CGG - Chr6:7812249-7812268 MsG0680030718.01.T01:intron 20.0%
!!! GTAGTACAAAATTTGATTTA+AGG - Chr6:7812678-7812697 MsG0680030718.01.T01:intron 20.0%
!!! GTTTACTTTTGTTTGTAATT+GGG + Chr6:7814542-7814561 None:intergenic 20.0%
!!! TTCATTAATTTGTAAATGGA+AGG - Chr6:7814710-7814729 MsG0680030718.01.T01:intron 20.0%
! AAAAAACCATAAAGGAAAAG+AGG + Chr6:7816164-7816183 None:intergenic 25.0%
! AAACAATCATAAAAGGTAGT+TGG + Chr6:7814386-7814405 None:intergenic 25.0%
! AAATTTCTCACATGATAAGA+AGG - Chr6:7812945-7812964 MsG0680030718.01.T01:intron 25.0%
! AACTAAAACCTTAAGCTATT+AGG + Chr6:7814351-7814370 None:intergenic 25.0%
! AACTCACTCAAATTAAAGAA+AGG + Chr6:7814915-7814934 None:intergenic 25.0%
! AAGAATGATCAATGATAAGT+AGG + Chr6:7812425-7812444 None:intergenic 25.0%
! AATGTATCACAATTGTTGTA+TGG - Chr6:7814817-7814836 MsG0680030718.01.T01:intron 25.0%
! AATTCTATGTACGAATTGTT+GGG + Chr6:7814425-7814444 None:intergenic 25.0%
! ACCTATTCATCAAAACAATT+AGG - Chr6:7816116-7816135 MsG0680030718.01.T01:intron 25.0%
! AGAAGATACTAAACGAAATA+AGG - Chr6:7816387-7816406 MsG0680030718.01.T01:CDS 25.0%
! AGAATGATCAATGATAAGTA+GGG + Chr6:7812424-7812443 None:intergenic 25.0%
! AGCAATGAAATCAATTGTTA+TGG - Chr6:7816429-7816448 MsG0680030718.01.T01:CDS 25.0%
! ATGATAAGTTAAAATGGCTT+TGG + Chr6:7815216-7815235 None:intergenic 25.0%
! ATGTATCACAATTGTTGTAT+GGG - Chr6:7814818-7814837 MsG0680030718.01.T01:intron 25.0%
! ATTCCATTGTGAAGAATTAT+TGG - Chr6:7812646-7812665 MsG0680030718.01.T01:intron 25.0%
! CAAACAAATTGCTAAATGAT+CGG - Chr6:7813644-7813663 MsG0680030718.01.T01:intron 25.0%
! CATTTAAAAAATTAAACGGG+GGG + Chr6:7814591-7814610 None:intergenic 25.0%
! CATTTATGTTATGTTTAGTG+AGG - Chr6:7814622-7814641 MsG0680030718.01.T01:intron 25.0%
! CCTATTCATCAAAACAATTA+GGG - Chr6:7816117-7816136 MsG0680030718.01.T01:intron 25.0%
! CGAAAAAAAAATCATGTCAA+AGG - Chr6:7815803-7815822 MsG0680030718.01.T01:intron 25.0%
! CTCACTAAACATAACATAAA+TGG + Chr6:7814624-7814643 None:intergenic 25.0%
! CTTTAATATCTTCGATATGT+TGG + Chr6:7812198-7812217 None:intergenic 25.0%
! GAAGAATTATTGGATCTTAA+TGG - Chr6:7812656-7812675 MsG0680030718.01.T01:intron 25.0%
! GAAGATATTAAAGCAAGTTA+AGG - Chr6:7812205-7812224 MsG0680030718.01.T01:intron 25.0%
! GATGAATAGGTCTATAAATT+AGG + Chr6:7816107-7816126 None:intergenic 25.0%
! GTTAAAGGAAATTCAAAAGA+AGG + Chr6:7813164-7813183 None:intergenic 25.0%
! TAATGATCACATGATGTTAA+AGG + Chr6:7813179-7813198 None:intergenic 25.0%
! TAATTCTATGTACGAATTGT+TGG + Chr6:7814426-7814445 None:intergenic 25.0%
! TACTTAAATAACTTGGAATG+AGG + Chr6:7812984-7813003 None:intergenic 25.0%
! TATTCGGAAACAATCATAAA+AGG + Chr6:7814393-7814412 None:intergenic 25.0%
! TCATAAAACATAGACATAAG+AGG + Chr6:7813830-7813849 None:intergenic 25.0%
! TCGACAATACTTAAATAACT+TGG + Chr6:7812991-7813010 None:intergenic 25.0%
!! ACGTTTTCAAAAAACCATAA+AGG + Chr6:7816172-7816191 None:intergenic 25.0%
!!! AAAAGCATTTTTATCTTGAG+CGG - Chr6:7815452-7815471 MsG0680030718.01.T01:intron 25.0%
!!! ACTCACTTTTTTAAACTCAT+TGG - Chr6:7815860-7815879 MsG0680030718.01.T01:intron 25.0%
!!! AGTTTAACCATTTTTCAGAT+TGG - Chr6:7813109-7813128 MsG0680030718.01.T01:intron 25.0%
!!! ATTAGTTTCAAAGTCTTGTT+TGG + Chr6:7812523-7812542 None:intergenic 25.0%
!!! CTCACTTTTTTAAACTCATT+GGG - Chr6:7815861-7815880 MsG0680030718.01.T01:intron 25.0%
!!! GGTTTACTTTTGTTTGTAAT+TGG + Chr6:7814543-7814562 None:intergenic 25.0%
!!! TGATTAGTTTTGATGTAACA+AGG + Chr6:7813405-7813424 None:intergenic 25.0%
!!! TTTGGTTGATGATATTCATT+GGG + Chr6:7816239-7816258 None:intergenic 25.0%
AAAATATCAGATGCCGATAA+AGG - Chr6:7812710-7812729 MsG0680030718.01.T01:intron 30.0%
AAATGCAATAAGAGATGAAG+AGG - Chr6:7814648-7814667 MsG0680030718.01.T01:intron 30.0%
AACCTTAAGCTATTAGGTTA+TGG + Chr6:7814345-7814364 None:intergenic 30.0%
AATGCAATAAGAGATGAAGA+GGG - Chr6:7814649-7814668 MsG0680030718.01.T01:intron 30.0%
ACCTTAAGCTATTAGGTTAT+GGG + Chr6:7814344-7814363 None:intergenic 30.0%
ACTTTCAAACATATTTGGGT+TGG + Chr6:7815008-7815027 None:intergenic 30.0%
AGCATACTTTGATTCTTTCT+TGG - Chr6:7813898-7813917 MsG0680030718.01.T01:intron 30.0%
AGGGATGTCATATAAGAATT+CGG + Chr6:7812474-7812493 None:intergenic 30.0%
CCACTAGACTAGAAAAAAAA+CGG - Chr6:7815169-7815188 MsG0680030718.01.T01:intron 30.0%
GAACATATGGTCAAAAAAAG+TGG + Chr6:7816021-7816040 None:intergenic 30.0%
GATACTAAACGAAATAAGGA+TGG - Chr6:7816391-7816410 MsG0680030718.01.T01:CDS 30.0%
GATCCAATAATTCTTCACAA+TGG + Chr6:7812652-7812671 None:intergenic 30.0%
GGAAGAAAAATCTAACTTGA+TGG - Chr6:7812610-7812629 MsG0680030718.01.T01:intron 30.0%
GTCACTATATAGTTAGACTT+AGG - Chr6:7814131-7814150 MsG0680030718.01.T01:intron 30.0%
TAGACTAGAAAAAAAACGGA+TGG - Chr6:7815173-7815192 MsG0680030718.01.T01:intron 30.0%
TATTCATTGGGAGAATGAAT+AGG + Chr6:7816227-7816246 None:intergenic 30.0%
TGAATATCATCAACCAAACA+AGG - Chr6:7816241-7816260 MsG0680030718.01.T01:intron 30.0%
TTAAAATGGAGATATGAAGG+AGG - Chr6:7814862-7814881 MsG0680030718.01.T01:intron 30.0%
! AAGATCAATCTGAAACCATT+TGG - Chr6:7813271-7813290 MsG0680030718.01.T01:intron 30.0%
! ACATTTTCTTGAAAGACTAG+TGG + Chr6:7815568-7815587 None:intergenic 30.0%
! CTTTTGAACACTTTCTTCTT+TGG + Chr6:7812100-7812119 None:intergenic 30.0%
! GTTATTTAAGTATTGTCGAC+TGG - Chr6:7812992-7813011 MsG0680030718.01.T01:intron 30.0%
! TAATTTTATGGATGCAGCAA+GGG - Chr6:7812539-7812558 MsG0680030718.01.T01:intron 30.0%
! TGATTCTTGTAGTCCTTTTT+AGG + Chr6:7813230-7813249 None:intergenic 30.0%
!! AAGTCTTGTTTGGTATCAAT+TGG + Chr6:7812513-7812532 None:intergenic 30.0%
!! AGTCTTGTTTGGTATCAATT+GGG + Chr6:7812512-7812531 None:intergenic 30.0%
!! GTTAGAATTCACCTTTTTCA+AGG + Chr6:7815150-7815169 None:intergenic 30.0%
!! GTTTGGTTGATGATATTCAT+TGG + Chr6:7816240-7816259 None:intergenic 30.0%
!! TATATTTAAGGTGTTGCAGT+TGG - Chr6:7814011-7814030 MsG0680030718.01.T01:intron 30.0%
!! TCAAGATTTGTTGTTGCAAA+GGG + Chr6:7812400-7812419 None:intergenic 30.0%
!! TGGTGTTATTCATATGTATG+CGG - Chr6:7816491-7816510 MsG0680030718.01.T01:CDS 30.0%
!! TTCAAGATTTGTTGTTGCAA+AGG + Chr6:7812401-7812420 None:intergenic 30.0%
!!! CCCTAATTGTTTTGATGAAT+AGG + Chr6:7816120-7816139 None:intergenic 30.0%
!!! CTACTTCAAGAGGTATTTTT+TGG - Chr6:7814317-7814336 MsG0680030718.01.T01:intron 30.0%
!!! CTTTTTCAAGGTGAATAAGT+GGG + Chr6:7815138-7815157 None:intergenic 30.0%
!!! TTGAAGTGTGTTGCTATTTT+TGG + Chr6:7815661-7815680 None:intergenic 30.0%
!!! TTTTTCAAGGTGAATAAGTG+GGG + Chr6:7815137-7815156 None:intergenic 30.0%
!!! TTTTTTGAGACTACTTCAAG+AGG - Chr6:7814307-7814326 MsG0680030718.01.T01:intron 30.0%
AAACATAGACATAAGAGGTC+TGG + Chr6:7813825-7813844 None:intergenic 35.0%
AAACCATAAAGGAAAAGAGG+AGG + Chr6:7816161-7816180 None:intergenic 35.0%
AACCATAAAGGAAAAGAGGA+GGG + Chr6:7816160-7816179 None:intergenic 35.0%
AAGGGTTACACAATGATTAG+TGG - Chr6:7812557-7812576 MsG0680030718.01.T01:intron 35.0%
ACATGAGCCAATCTGAAAAA+TGG + Chr6:7813119-7813138 None:intergenic 35.0%
ACATGCATTGTTATATGCAG+GGG - Chr6:7815093-7815112 MsG0680030718.01.T01:intron 35.0%
ACCCATAACCTAATAGCTTA+AGG - Chr6:7814340-7814359 MsG0680030718.01.T01:intron 35.0%
CCACTTATTCACCTTGAAAA+AGG - Chr6:7815136-7815155 MsG0680030718.01.T01:intron 35.0%
GACATGCATTGTTATATGCA+GGG - Chr6:7815092-7815111 MsG0680030718.01.T01:intron 35.0%
GGTTTATCAGCAGGAAAATA+AGG + Chr6:7812137-7812156 None:intergenic 35.0%
GTCTCAAAACTTGTACATCT+TGG - Chr6:7813137-7813156 MsG0680030718.01.T01:intron 35.0%
GTTAAAGTGAGACTAGATTG+TGG + Chr6:7813361-7813380 None:intergenic 35.0%
TACCTCAGTTACTCCTTTAT+CGG + Chr6:7812726-7812745 None:intergenic 35.0%
TCACATGATAAGAAGGTTGA+GGG - Chr6:7812952-7812971 MsG0680030718.01.T01:intron 35.0%
TGGATGGACCAAAATTCATA+AGG + Chr6:7815641-7815660 None:intergenic 35.0%
TGGGTTATAGTAACATACGA+GGG + Chr6:7812493-7812512 None:intergenic 35.0%
TTGATGTAACAAGGAACCTA+AGG + Chr6:7813396-7813415 None:intergenic 35.0%
TTGGGTTATAGTAACATACG+AGG + Chr6:7812494-7812513 None:intergenic 35.0%
! ATTAGTGGTGTTAGCAATAG+TGG - Chr6:7812572-7812591 MsG0680030718.01.T01:intron 35.0%
! CTAATTTTATGGATGCAGCA+AGG - Chr6:7812538-7812557 MsG0680030718.01.T01:intron 35.0%
! TCTAACTTGATGGTAACACA+AGG - Chr6:7812620-7812639 MsG0680030718.01.T01:intron 35.0%
!! AAACCTTGTGTTAGTTTGTG+CGG + Chr6:7813019-7813038 None:intergenic 35.0%
!! CTTTCTTCTTTGGAATTTGC+AGG + Chr6:7812090-7812109 None:intergenic 35.0%
!! GGTGTTATTCATATGTATGC+GGG - Chr6:7816492-7816511 MsG0680030718.01.T01:CDS 35.0%
!!! AGTGTGTTGCTATTTTTGGA+TGG + Chr6:7815657-7815676 None:intergenic 35.0%
!!! CCGTTTTTTTTCTAGTCTAG+TGG + Chr6:7815172-7815191 None:intergenic 35.0%
!!! CCTTTTTCAAGGTGAATAAG+TGG + Chr6:7815139-7815158 None:intergenic 35.0%
!!! TGTTTTAGCTCCCTATTTTC+CGG - Chr6:7816308-7816327 MsG0680030718.01.T01:intron 35.0%
AAATGGAGATATGAAGGAGG+AGG - Chr6:7814865-7814884 MsG0680030718.01.T01:intron 40.0%
AACACCAAGACATCCATGAT+TGG + Chr6:7816478-7816497 None:intergenic 40.0%
AACACTTGTGGTTTATCAGC+AGG + Chr6:7812146-7812165 None:intergenic 40.0%
ACACCAAGACATCCATGATT+GGG + Chr6:7816477-7816496 None:intergenic 40.0%
ACTTAGGCTCTACTACTGTT+TGG - Chr6:7814147-7814166 MsG0680030718.01.T01:intron 40.0%
ATCGCTACAAGCTAGTAGTT+AGG + Chr6:7814178-7814197 None:intergenic 40.0%
ATGCATCGGAGAGAAATTGA+TGG + Chr6:7815262-7815281 None:intergenic 40.0%
CTAACTCATCGAAATCACGT+CGG - Chr6:7814956-7814975 MsG0680030718.01.T01:intron 40.0%
CTCACATGATAAGAAGGTTG+AGG - Chr6:7812951-7812970 MsG0680030718.01.T01:intron 40.0%
GAACATCTTTGGTTATCGAC+CGG + Chr6:7816330-7816349 None:intergenic 40.0%
GAGACTAGATTGTGGAGAAT+AGG + Chr6:7813353-7813372 None:intergenic 40.0%
GCACAAACTAACACAAGGTT+TGG - Chr6:7813018-7813037 MsG0680030718.01.T01:intron 40.0%
GCTGATAAACCACAAGTGTT+CGG - Chr6:7812146-7812165 MsG0680030718.01.T01:CDS 40.0%
GGACATGCATTGTTATATGC+AGG - Chr6:7815091-7815110 MsG0680030718.01.T01:intron 40.0%
GGTCGATAACCAAAGATGTT+CGG - Chr6:7816329-7816348 MsG0680030718.01.T01:intron 40.0%
TAACAACCTCTAGTTGCCTT+AGG - Chr6:7813377-7813396 MsG0680030718.01.T01:intron 40.0%
TCATTGGGAGAATGAATAGG+TGG + Chr6:7816224-7816243 None:intergenic 40.0%
TCGTGCAAATTTCCCAATCA+TGG - Chr6:7816462-7816481 MsG0680030718.01.T01:CDS 40.0%
TGGTTATCGACCGGAAAATA+GGG + Chr6:7816321-7816340 None:intergenic 40.0%
TGTACTCGGGTAATATGCAT+CGG + Chr6:7815276-7815295 None:intergenic 40.0%
TGTTGGGTCATGAGCATATT+CGG + Chr6:7814409-7814428 None:intergenic 40.0%
TTGGTTATCGACCGGAAAAT+AGG + Chr6:7816322-7816341 None:intergenic 40.0%
TTTCCCAATCATGGATGTCT+TGG - Chr6:7816471-7816490 MsG0680030718.01.T01:CDS 40.0%
! AACCCTCCTCTTTTCCTTTA+TGG - Chr6:7816155-7816174 MsG0680030718.01.T01:intron 40.0%
! AAGCACTGTTTCCATTCCAA+AGG + Chr6:7813680-7813699 None:intergenic 40.0%
!! CAAACATATTTGGGTTGGTC+TGG + Chr6:7815003-7815022 None:intergenic 40.0%
!!! TTTGGTGGTGTTTTCCTCTT+GGG + Chr6:7814503-7814522 None:intergenic 40.0%
AAACACCACCAAACACCAAG+AGG - Chr6:7814510-7814529 MsG0680030718.01.T01:intron 45.0%
AAGGAACCTAAGGCAACTAG+AGG + Chr6:7813386-7813405 None:intergenic 45.0%
AATTAAACGGGGGGAGAGTT+TGG + Chr6:7814582-7814601 None:intergenic 45.0%
ACATCAAGACATCCACCAAC+AGG + Chr6:7812291-7812310 None:intergenic 45.0%
ATAAGCATGCTTATCGGCGA+AGG - Chr6:7816056-7816075 MsG0680030718.01.T01:intron 45.0%
ATAGGTCTGGGAGATTTCCA+TGG + Chr6:7813051-7813070 None:intergenic 45.0%
ATTGTTATATGCAGGGGCCT+GGG - Chr6:7815099-7815118 MsG0680030718.01.T01:intron 45.0%
CATCAAGACATCCACCAACA+GGG + Chr6:7812290-7812309 None:intergenic 45.0%
GAAGAAACGCAGATGAAGTG+TGG + Chr6:7814478-7814497 None:intergenic 45.0%
TGCCGATAAAGGAGTAACTG+AGG - Chr6:7812721-7812740 MsG0680030718.01.T01:intron 45.0%
! ACTCATGAAGTGTGTCGATC+AGG - Chr6:7813316-7813335 MsG0680030718.01.T01:intron 45.0%
! AGTGGTGTTAGCAATAGTGG+TGG - Chr6:7812575-7812594 MsG0680030718.01.T01:intron 45.0%
! CTGATGACTAGCTCACCAAA+TGG + Chr6:7813289-7813308 None:intergenic 45.0%
! GCTGATGATGTCCTTTGGAA+TGG - Chr6:7813666-7813685 MsG0680030718.01.T01:intron 45.0%
! GGGAGAGTTTGGTTTCTTGT+GGG + Chr6:7814571-7814590 None:intergenic 45.0%
! TTTGGTTTCTTGTGGGTGTC+CGG + Chr6:7814564-7814583 None:intergenic 45.0%
!! ACATATTTGGGTTGGTCTGG+TGG + Chr6:7815000-7815019 None:intergenic 45.0%
!! TGGGAGACTGCTTTTGAATG+AGG - Chr6:7815880-7815899 MsG0680030718.01.T01:intron 45.0%
!!! CAAGGTTTGGTTTTCTGCCA+TGG - Chr6:7813031-7813050 MsG0680030718.01.T01:intron 45.0%
!!! GTTTGGTGGTGTTTTCCTCT+TGG + Chr6:7814504-7814523 None:intergenic 45.0%
!! AAAGAATATTTAATATTTAA+TGG + Chr6:7815730-7815749 None:intergenic 5.0%
!!! ATATAAATATATTTTTTTGA+CGG + Chr6:7815529-7815548 None:intergenic 5.0%
ACCACCAAACACCAAGAGGA+TGG - Chr6:7814514-7814533 MsG0680030718.01.T01:intron 50.0%
CATTGTTATATGCAGGGGCC+TGG - Chr6:7815098-7815117 MsG0680030718.01.T01:intron 50.0%
CTGCGTTTCTTCTTCCCAAG+AGG - Chr6:7814486-7814505 MsG0680030718.01.T01:intron 50.0%
GGCAACGCTCATCGTTTGTT+CGG - Chr6:7812167-7812186 MsG0680030718.01.T01:intron 50.0%
GGCGATGCTCATCGTTTGTT+TGG - Chr6:7816350-7816369 MsG0680030718.01.T01:intron 50.0%
GGTCCGCACAAACTAACACA+AGG - Chr6:7813013-7813032 MsG0680030718.01.T01:intron 50.0%
GGTGTTAGCAATAGTGGTGG+TGG - Chr6:7812578-7812597 MsG0680030718.01.T01:intron 50.0%
TATGCGTGCTCATTCCCTGT+TGG - Chr6:7812273-7812292 MsG0680030718.01.T01:intron 50.0%
TCAAGGTGAATAAGTGGGGC+CGG + Chr6:7815133-7815152 None:intergenic 50.0%
TCACAGAGGAGACACAAGCA+AGG - Chr6:7812056-7812075 MsG0680030718.01.T01:CDS 50.0%
TGAGCATAGCTCAGTTGGCA+GGG - Chr6:7815070-7815089 MsG0680030718.01.T01:intron 50.0%
TGCCAACTGAGCTATGCTCA+GGG + Chr6:7815070-7815089 None:intergenic 50.0%
TGGAGATATGAAGGAGGAGG+AGG - Chr6:7814868-7814887 MsG0680030718.01.T01:intron 50.0%
! GATCGGCTGATGATGTCCTT+TGG - Chr6:7813661-7813680 MsG0680030718.01.T01:intron 50.0%
! GGAACTCGAGTGCTACTAGA+AGG + Chr6:7812453-7812472 None:intergenic 50.0%
! GGGGAGAGTTTGGTTTCTTG+TGG + Chr6:7814572-7814591 None:intergenic 50.0%
! GTAATTGGGTGCCATCCTCT+TGG + Chr6:7814528-7814547 None:intergenic 50.0%
! TCGAGTGCTACTAGAAGGAG+TGG + Chr6:7812448-7812467 None:intergenic 50.0%
! TGAGCATCGCCGAACATCTT+TGG + Chr6:7816341-7816360 None:intergenic 50.0%
!! CATGCTGCACAAGCCTTGTT+TGG + Chr6:7816257-7816276 None:intergenic 50.0%
!! TAGTGGTGGTGGCAATGCAA+TGG - Chr6:7812589-7812608 MsG0680030718.01.T01:intron 50.0%
AAGGTGAATAAGTGGGGCCG+GGG + Chr6:7815131-7815150 None:intergenic 55.0%
AGCATGCTTATCGGCGAAGG+AGG - Chr6:7816059-7816078 MsG0680030718.01.T01:intron 55.0%
CAAGGTGAATAAGTGGGGCC+GGG + Chr6:7815132-7815151 None:intergenic 55.0%
CTGAGCATAGCTCAGTTGGC+AGG - Chr6:7815069-7815088 MsG0680030718.01.T01:intron 55.0%
CTGCCAACTGAGCTATGCTC+AGG + Chr6:7815071-7815090 None:intergenic 55.0%
GAAGGAGGAGGAGGATGATG+AGG - Chr6:7814877-7814896 MsG0680030718.01.T01:intron 55.0%
GCATGCTTATCGGCGAAGGA+GGG - Chr6:7816060-7816079 MsG0680030718.01.T01:intron 55.0%
GTCCCTGAGCATAGCTCAGT+TGG - Chr6:7815065-7815084 MsG0680030718.01.T01:intron 55.0%
! TGAGCGTTGCCGAACACTTG+TGG + Chr6:7812158-7812177 None:intergenic 55.0%
!! GCCATCCTCTTGGTGTTTGG+TGG + Chr6:7814518-7814537 None:intergenic 55.0%
!! GGTGCCATCCTCTTGGTGTT+TGG + Chr6:7814521-7814540 None:intergenic 55.0%
GCGTGCTCATTCCCTGTTGG+TGG - Chr6:7812276-7812295 MsG0680030718.01.T01:intron 60.0%
AGGGGCCTGGGTTCGAACCC+CGG - Chr6:7815111-7815130 MsG0680030718.01.T01:intron 70.0%
TGGGGCCGGGGTTCGAACCC+AGG + Chr6:7815119-7815138 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 7812053 7816525 7812053 ID=MsG0680030718.01;Name=MsG0680030718.01
Chr6 mRNA 7812053 7816525 7812053 ID=MsG0680030718.01.T01;Parent=MsG0680030718.01;Name=MsG0680030718.01.T01;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|0|0|2|0|95
Chr6 exon 7812053 7812172 7812053 ID=MsG0680030718.01.T01:exon:6853;Parent=MsG0680030718.01.T01
Chr6 exon 7816358 7816525 7816358 ID=MsG0680030718.01.T01:exon:6852;Parent=MsG0680030718.01.T01
Chr6 CDS 7816358 7816525 7816358 ID=MsG0680030718.01.T01:cds;Parent=MsG0680030718.01.T01
Chr6 CDS 7812053 7812172 7812053 ID=MsG0680030718.01.T01:cds;Parent=MsG0680030718.01.T01
Chr6 mRNA 7812053 7816498 7812053 ID=MsG0680030718.01.T02;Parent=MsG0680030718.01;Name=MsG0680030718.01.T02;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|0|0|2|0|88
Chr6 exon 7812053 7812155 7812053 ID=MsG0680030718.01.T02:exon:6855;Parent=MsG0680030718.01.T02
Chr6 exon 7816335 7816498 7816335 ID=MsG0680030718.01.T02:exon:6854;Parent=MsG0680030718.01.T02
Chr6 CDS 7816335 7816498 7816335 ID=MsG0680030718.01.T02:cds;Parent=MsG0680030718.01.T02
Chr6 CDS 7812053 7812155 7812053 ID=MsG0680030718.01.T02:cds;Parent=MsG0680030718.01.T02
Chr6 mRNA 7812053 7816498 7812053 ID=MsG0680030718.01.T03;Parent=MsG0680030718.01;Name=MsG0680030718.01.T03;_AED=0.45;_eAED=0.45;_QI=0|0|0|1|0|0|2|0|87
Chr6 exon 7812053 7812169 7812053 ID=MsG0680030718.01.T03:exon:6857;Parent=MsG0680030718.01.T03
Chr6 exon 7816352 7816498 7816352 ID=MsG0680030718.01.T03:exon:6856;Parent=MsG0680030718.01.T03
Chr6 CDS 7816352 7816498 7816352 ID=MsG0680030718.01.T03:cds;Parent=MsG0680030718.01.T03
Chr6 CDS 7812053 7812169 7812053 ID=MsG0680030718.01.T03:cds;Parent=MsG0680030718.01.T03
Gene Sequence

>MsG0680030718.01.T03

TGTGCATCCTGCAAATTCCAAAGAAGAAAGTGTTCAAAAGATTGTCTTCTAGCTCCTTATTTTCCTGCTGATAAACCACAAGTGTTCGGCAACGCTCATCGTTTGTTCGGTGTTTCCAACATATCGAAGATATTAAAGCAAGTTAAGGATGGTGATCAAAGAGATGAAGCAATGAAATCAATTGTTATGGAGTCGAAAATTCGTGCAAATTTCCCAATCATGGATGTCTTGGTGTTATTCATATGTATGCGGGATGATAAATGA

>MsG0680030718.01.T01

ATATCACAGAGGAGACACAAGCAAGGCTGTGCATCCTGCAAATTCCAAAGAAGAAAGTGTTCAAAAGATTGTCTTCTAGCTCCTTATTTTCCTGCTGATAAACCACAAGTGTTCGGCAACGCTCATCGTTTGTTCGGTGTTTCCAACATATCGAAGATATTAAAGCAAAAGGATGGTGATCAAAGAGATGAAGCAATGAAATCAATTGTTATGGAGTCGAAAATTCGTGCAAATTTCCCAATCATGGATGTCTTGGTGTTATTCATATGTATGCGGGATGATAAATGA

>MsG0680030718.01.T02

TGTGCATCCTGCAAATTCCAAAGAAGAAAGTGTTCAAAAGATTGTCTTCTAGCTCCTTATTTTCCTGCTGATAAACCACAAGTGTTCGGCAACGCTCATCGTTTGTTCGGTGTTTCCAACATATCGAAGATATTAAAGCAAGTTAAGGAAAATATAGAGATGAAAGATGAAGCAATGAAATCAATTGTTATGGAGTCGAAAATTCGTGCAAATTTCCCAATCATGGATGTCTTGGTGTTATTCATATGTATGCGGGATGATAAATGA
Protein sequence

>MsG0680030718.01.T03

CASCKFQRRKCSKDCLLAPYFPADKPQVFGNAHRLFGVSNISKILKQVKDGDQRDEAMKSIVMESKIRANFPIMDVLVLFICMRDDK*

>MsG0680030718.01.T01

ISQRRHKQGCASCKFQRRKCSKDCLLAPYFPADKPQVFGNAHRLFGVSNISKILKQKDGDQRDEAMKSIVMESKIRANFPIMDVLVLFICMRDDK*

>MsG0680030718.01.T02

CASCKFQRRKCSKDCLLAPYFPADKPQVFGNAHRLFGVSNISKILKQVKENIEMKDEAMKSIVMESKIRANFPIMDVLVLFICMRDDK*