AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031142.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031142.01.T01 MTR_6g016860 81.907 514 68 1 33 521 1 514 0.0 858
MsG0680031142.01.T01 MTR_6g016795 64.875 558 169 2 1 533 93 648 0.0 751
MsG0680031142.01.T01 MTR_6g016800 67.029 552 154 3 5 531 98 646 0.0 738
MsG0680031142.01.T01 MTR_6g016785 62.366 558 181 5 2 533 158 712 0.0 734
MsG0680031142.01.T01 MTR_6g016820 68.773 554 143 5 7 533 101 651 0.0 721
MsG0680031142.01.T01 MTR_6g016845 61.607 560 187 5 1 533 103 661 0.0 671
MsG0680031142.01.T01 MTR_6g016790 58.036 560 206 4 1 533 85 642 0.0 664
MsG0680031142.01.T01 MTR_6g016810 57.679 560 208 4 1 533 85 642 0.0 657
MsG0680031142.01.T01 MTR_7g013170 56.093 558 215 4 2 533 93 646 0.0 651
MsG0680031142.01.T01 MTR_6g016840 62.138 552 177 6 11 533 108 656 0.0 645
MsG0680031142.01.T01 MTR_7g013810 55.914 558 216 4 2 533 90 643 0.0 641
MsG0680031142.01.T01 MTR_7g028445 60.606 528 191 3 5 531 99 610 0.0 629
MsG0680031142.01.T01 MTR_4g036905 60.606 528 191 3 5 531 99 610 0.0 629
MsG0680031142.01.T01 MTR_6g016855 68.405 326 88 3 209 533 36 347 1.54e-148 437
MsG0680031142.01.T01 MTR_1g079270 55.077 325 114 5 139 436 49 368 4.94e-116 354
MsG0680031142.01.T01 MTR_6g016850 93.491 169 10 1 558 725 3 171 2.42e-109 329
MsG0680031142.01.T01 MTR_8g105600 91.975 162 13 0 558 719 3 164 5.48e-98 314
MsG0680031142.01.T01 MTR_6g037090 52.117 307 86 5 38 318 39 310 2.90e-93 293
MsG0680031142.01.T01 MTR_1g079320 49.547 331 84 9 236 532 2 283 9.00e-85 270
MsG0680031142.01.T01 MTR_7g112730 50.213 235 74 7 301 533 90 283 1.10e-60 206
MsG0680031142.01.T01 MTR_4g021790 47.205 161 84 1 555 715 1 160 1.10e-41 153
MsG0680031142.01.T01 MTR_4g021845 45.000 160 87 1 555 714 1 159 3.28e-40 147
MsG0680031142.01.T01 MTR_8g093040 53.147 143 61 3 555 692 1 142 6.86e-40 148
MsG0680031142.01.T01 MTR_4g021760 44.720 161 87 2 555 714 1 160 3.98e-39 147
MsG0680031142.01.T01 MTR_5g055260 43.478 161 83 1 555 715 1 153 1.43e-37 141
MsG0680031142.01.T01 MTR_4g021855 43.750 160 89 1 555 714 1 159 4.21e-37 141
MsG0680031142.01.T01 MTR_6g007703 48.148 162 40 4 309 426 4 165 5.98e-35 130
MsG0680031142.01.T01 MTR_6g045327 41.250 160 91 3 559 716 9 167 2.43e-28 118
MsG0680031142.01.T01 MTR_1g032570 34.503 171 110 2 556 725 3 172 2.56e-26 115
MsG0680031142.01.T01 MTR_6g007713 50.000 108 28 3 355 462 3 84 1.83e-24 98.6
MsG0680031142.01.T01 MTR_3g086100 37.594 133 81 2 557 688 6 137 9.48e-24 106
MsG0680031142.01.T01 MTR_8g079940 34.641 153 98 2 564 715 25 176 9.16e-23 103
MsG0680031142.01.T01 MTR_1g013180 31.319 182 122 3 544 724 136 315 8.89e-22 100
MsG0680031142.01.T01 MTR_4g121020 37.008 127 78 2 561 686 28 153 2.34e-21 99.8
MsG0680031142.01.T01 MTR_4g121020 37.008 127 78 2 561 686 28 153 2.36e-21 99.8
MsG0680031142.01.T01 MTR_4g023980 40.566 106 62 1 609 714 35 139 2.81e-21 92.0
MsG0680031142.01.T01 MTR_2g034960 37.795 127 77 2 561 686 26 151 5.49e-21 98.2
MsG0680031142.01.T01 MTR_6g007717 54.023 87 27 2 426 512 123 196 6.44e-21 91.7
MsG0680031142.01.T01 MTR_6g007717 45.263 95 26 2 173 242 15 108 1.96e-11 64.3
MsG0680031142.01.T01 MTR_1g013170 37.302 126 77 2 562 686 3 127 1.82e-20 95.9
MsG0680031142.01.T01 MTR_7g117705 35.433 127 79 2 562 686 3 128 4.35e-20 94.4
MsG0680031142.01.T01 MTR_3g106220 32.544 169 108 3 561 724 5 172 4.99e-20 95.1
MsG0680031142.01.T01 MTR_4g131570 32.164 171 109 3 560 729 13 177 7.72e-20 94.4
MsG0680031142.01.T01 MTR_4g131600 31.737 167 107 3 564 729 20 180 9.44e-20 94.4
MsG0680031142.01.T01 MTR_3g102600 34.646 127 81 2 560 685 4 129 8.04e-19 85.5
MsG0680031142.01.T01 MTR_3g102600 34.646 127 81 2 560 685 4 129 9.23e-19 86.3
MsG0680031142.01.T01 MTR_4g131580 29.940 167 110 3 564 729 17 177 4.49e-18 89.0
MsG0680031142.01.T01 MTR_2g450070 32.540 126 83 2 562 686 16 140 6.64e-17 85.5
MsG0680031142.01.T01 MTR_2g450070 32.540 126 83 2 562 686 16 140 7.17e-17 85.5
MsG0680031142.01.T01 MTR_3g102590 33.793 145 86 4 561 703 5 141 7.96e-17 79.7
MsG0680031142.01.T01 MTR_3g102590 33.793 145 86 4 561 703 5 141 1.44e-16 80.1
MsG0680031142.01.T01 MTR_1g032570 31.731 104 70 1 622 725 1 103 4.72e-12 69.7
MsG0680031142.01.T01 MTR_8g032710 31.667 120 81 1 566 684 19 138 9.07e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031142.01.T01 AT5G15870 56.684 561 208 7 3 533 140 695 0.0 635
MsG0680031142.01.T01 AT1G18310 51.295 579 190 9 3 531 93 629 0.0 574
MsG0680031142.01.T01 AT1G67710 36.508 126 78 2 565 689 8 132 1.14e-22 102
MsG0680031142.01.T01 AT2G01760 37.795 127 76 3 562 686 5 130 4.03e-22 99.8
MsG0680031142.01.T01 AT3G16857 35.484 124 78 2 564 686 33 155 4.27e-19 92.4
MsG0680031142.01.T01 AT3G16857 35.484 124 78 2 564 686 33 155 4.63e-19 92.4
MsG0680031142.01.T01 AT2G25180 28.994 169 112 3 562 729 11 172 3.64e-18 89.4
MsG0680031142.01.T01 AT4G31920 33.600 125 81 2 562 685 11 134 6.79e-18 88.2
MsG0680031142.01.T01 AT2G01760 30.968 155 76 4 562 686 5 158 2.98e-17 85.1
MsG0680031142.01.T01 AT5G49240 31.783 129 86 2 560 687 34 161 9.87e-17 82.0
MsG0680031142.01.T01 AT1G49190 31.298 131 88 2 559 688 25 154 2.67e-15 79.3
MsG0680031142.01.T01 AT1G49190 31.298 131 88 2 559 688 25 154 1.36e-14 77.8
MsG0680031142.01.T01 AT5G58080 30.000 160 106 4 562 720 12 166 1.75e-13 74.3
MsG0680031142.01.T01 AT3G62670 30.657 137 91 3 569 704 42 175 2.35e-13 73.2
MsG0680031142.01.T01 AT1G67710 39.706 68 40 1 622 689 1 67 9.02e-12 68.6

Find 128 sgRNAs with CRISPR-Local

Find 262 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCATCTCTTGCCCTTATT+TGG 0.189913 6:-15059425 None:intergenic
AATAATCATCATTGTATATT+AGG 0.194005 6:+15056360 MsG0680031142.01.T01:CDS
ATCTTTATAAGTTGCATTCT+TGG 0.225093 6:+15056529 MsG0680031142.01.T01:CDS
GAAGATTATAAAAGGCTTAA+AGG 0.225322 6:+15057028 MsG0680031142.01.T01:CDS
GGGGTTTGTGTTTGCTTTGC+AGG 0.228425 6:+15056980 MsG0680031142.01.T01:CDS
ACTACTTCATGCCATGCTTT+TGG 0.246861 6:+15056111 MsG0680031142.01.T01:CDS
GTTGCATTGAAGATTATAAA+AGG 0.263857 6:+15057020 MsG0680031142.01.T01:CDS
CATTTATACTCAACACAAAA+TGG 0.283028 6:-15055809 None:intergenic
AAATTCTTAACCTTAACTTT+TGG 0.284708 6:-15056201 None:intergenic
AAGATTATAAAAGGCTTAAA+GGG 0.298938 6:+15057029 MsG0680031142.01.T01:CDS
TCTAATGCTGAGTTTGGTTT+TGG 0.304904 6:+15056330 MsG0680031142.01.T01:CDS
TTGGCATTGTTGCTGATTCA+TGG 0.305761 6:+15055963 MsG0680031142.01.T01:CDS
GGGTTGAAGGTAGCCAAATA+AGG 0.310675 6:+15059412 MsG0680031142.01.T01:CDS
TTTAAGTACAAAAGCATTGA+TGG 0.320603 6:+15055932 MsG0680031142.01.T01:CDS
AACGATGCAACATCGGAAAA+AGG 0.322362 6:+15059462 MsG0680031142.01.T01:CDS
ATAATGAAGGCCATTGAAAA+TGG 0.335391 6:+15059273 MsG0680031142.01.T01:CDS
AGCTCAAGCATATGCACTAT+TGG 0.344594 6:+15056446 MsG0680031142.01.T01:CDS
GTTACAGAGAGAGTCAAATA+AGG 0.345855 6:-15055503 None:intergenic
GGTGACACTGAGATCATTAT+AGG 0.347981 6:-15055432 None:intergenic
TCTTTATAAGTTGCATTCTT+GGG 0.351546 6:+15056530 MsG0680031142.01.T01:CDS
ACATGAGTTACTTTCTTGTA+AGG 0.383295 6:+15055474 MsG0680031142.01.T01:CDS
AACTCAAGAGTGATAGTGTT+TGG 0.385258 6:+15058750 MsG0680031142.01.T01:intron
AATGATTCTAATGCTGAGTT+TGG 0.400347 6:+15056324 MsG0680031142.01.T01:CDS
TTGCCTGCTTTAAATAGAAA+TGG 0.405387 6:+15056939 MsG0680031142.01.T01:CDS
TGGCTTGATGGGACTTTCAA+TGG 0.409192 6:+15056246 MsG0680031142.01.T01:CDS
GATGGGACTTTCAATGGTAA+TGG 0.412422 6:+15056252 MsG0680031142.01.T01:CDS
TGGATCAACACTTGCATCAC+TGG 0.414666 6:+15056674 MsG0680031142.01.T01:CDS
AAGTAACTCATGTTGGTAGA+AGG 0.423820 6:-15055464 None:intergenic
TGATATGATTCCAAAAGTTA+AGG 0.426040 6:+15056191 MsG0680031142.01.T01:CDS
ACAAGAACTTTAACATTGGC+TGG 0.429953 6:-15058852 None:intergenic
CCTCTACAAAATTTACCATT+CGG 0.437528 6:+15055588 MsG0680031142.01.T01:CDS
ATGATTGAACCTTGGCTTGA+TGG 0.439095 6:+15056234 MsG0680031142.01.T01:CDS
GTTGGTAGAAGGAATATCTA+AGG 0.440152 6:-15055453 None:intergenic
ATATGTGGCATCATGCTGTT+AGG 0.443627 6:+15059343 MsG0680031142.01.T01:CDS
TCATTGATGGGAATGGCTTA+TGG 0.446169 6:+15056630 MsG0680031142.01.T01:CDS
ATACTATGCTGCATCATTGA+TGG 0.446966 6:+15056617 MsG0680031142.01.T01:CDS
CATGAATTTGATAGCACAAA+AGG 0.447668 6:+15059047 MsG0680031142.01.T01:CDS
AATGTGGTGGCATGTTAAAA+AGG 0.448755 6:+15056713 MsG0680031142.01.T01:CDS
TGATTGAACCTTGGCTTGAT+GGG 0.452907 6:+15056235 MsG0680031142.01.T01:CDS
TATAAGTTGCATTCTTGGGT+TGG 0.454513 6:+15056534 MsG0680031142.01.T01:CDS
GCTTTAAATAGAAATGGTAT+TGG 0.458607 6:+15056945 MsG0680031142.01.T01:CDS
TGTGGTTTGCTCCGGCTGAA+TGG 0.458738 6:+15056817 MsG0680031142.01.T01:CDS
TGCAGATGGAAGGGAACAAA+TGG 0.476754 6:+15056572 MsG0680031142.01.T01:CDS
TGGTATTGGTGAGGAATGGA+AGG 0.479144 6:+15056959 MsG0680031142.01.T01:CDS
TATATTTACTTACTAATGAC+AGG 0.483959 6:-15059159 None:intergenic
GGGTTTGTGTTTGCTTTGCA+GGG 0.485829 6:+15056981 MsG0680031142.01.T01:CDS
TAAATGAATTTGCAGATGGA+AGG 0.488539 6:+15056562 MsG0680031142.01.T01:CDS
TGTTCTGAAGGATCAACAAA+TGG 0.496320 6:+15059249 MsG0680031142.01.T01:CDS
GTTGAGATGGAAAGAGGAGT+TGG 0.497200 6:-15055530 None:intergenic
CATGAGTTACTTTCTTGTAA+GGG 0.498417 6:+15055475 MsG0680031142.01.T01:CDS
ATACCATTTCTATTTAAAGC+AGG 0.498730 6:-15056942 None:intergenic
ACTCGAATTATACGCGATTG+AGG 0.499584 6:+15056499 MsG0680031142.01.T01:CDS
AACATGAGGCTGTTCTTGAC+AGG 0.504280 6:+15055741 MsG0680031142.01.T01:CDS
TATCCGAATTGTGCCAGAAA+AGG 0.506123 6:-15055693 None:intergenic
AAGTTGCATTCTTGGGTTGG+AGG 0.506643 6:+15056537 MsG0680031142.01.T01:CDS
CAGTGGATTGTGGTTTGCTC+CGG 0.506703 6:+15056809 MsG0680031142.01.T01:CDS
ATCAACAAATGGAATAATGA+AGG 0.507137 6:+15059260 MsG0680031142.01.T01:CDS
GGTTGAAGGTAGCCAAATAA+GGG 0.508208 6:+15059413 MsG0680031142.01.T01:CDS
GCTTGCTTTAATAGCTGAAG+AGG 0.511461 6:+15056158 MsG0680031142.01.T01:CDS
GAGTATAAATGGGAGAAGAA+AGG 0.511952 6:+15055821 MsG0680031142.01.T01:CDS
AGTTGCATTCTTGGGTTGGA+GGG 0.517333 6:+15056538 MsG0680031142.01.T01:CDS
AGTATAAATGGGAGAAGAAA+GGG 0.517569 6:+15055822 MsG0680031142.01.T01:CDS
CTTGCTTCTCTCCATTCAGC+CGG 0.517993 6:-15056828 None:intergenic
AAGTCAAGTAAATGATATCA+TGG 0.518592 6:-15055556 None:intergenic
GATAAAAGCTGAAGGTGAAG+AGG 0.519622 6:-15055872 None:intergenic
AAAATCAAGTAAAGTATATG+TGG 0.524588 6:+15059328 MsG0680031142.01.T01:CDS
GATATCATGGACGGTTGAGA+TGG 0.526141 6:-15055543 None:intergenic
AATCACAAGAACTTTAACAT+TGG 0.529369 6:-15058856 None:intergenic
TGAAACTCAAATGCCGGACA+TGG 0.529643 6:+15059092 MsG0680031142.01.T01:CDS
TGAAGGAGATGATTGAACCT+TGG 0.530477 6:+15056226 MsG0680031142.01.T01:CDS
TGCTGCATCATTGATGGGAA+TGG 0.530688 6:+15056623 MsG0680031142.01.T01:CDS
ACAGAAGATAATAGGATCAT+CGG 0.535360 6:+15056762 MsG0680031142.01.T01:CDS
TTGTTAAGATTGATCCAACA+TGG 0.535485 6:+15056409 MsG0680031142.01.T01:CDS
TTCAGATGTTGATTATGTGA+AGG 0.536791 6:+15056899 MsG0680031142.01.T01:CDS
TCAAGCATATGCACTATTGG+AGG 0.537924 6:+15056449 MsG0680031142.01.T01:CDS
AGATTGATCCAACATGGGGC+AGG 0.538984 6:+15056415 MsG0680031142.01.T01:CDS
ACGCTTAAACGATGCAACAT+CGG 0.539685 6:+15059455 MsG0680031142.01.T01:CDS
GAAATGGTATTGGTGAGGAA+TGG 0.541993 6:+15056955 MsG0680031142.01.T01:CDS
TACTATGCTGCATCATTGAT+GGG 0.543053 6:+15056618 MsG0680031142.01.T01:CDS
AAAGTTCACTCAAGTCCGTT+CGG 0.543142 6:+15055655 MsG0680031142.01.T01:CDS
AAATCAAATGAATCCATGTC+CGG 0.545425 6:-15059105 None:intergenic
TTATACTTCCTGCCCCATGT+TGG 0.548449 6:-15056423 None:intergenic
GGCTGGAAACTCATTTGCAA+AGG 0.548983 6:-15058835 None:intergenic
AGCATTGATGGTGATCTTGT+TGG 0.554829 6:+15055944 MsG0680031142.01.T01:CDS
AAATGAATTTGCAGATGGAA+GGG 0.560031 6:+15056563 MsG0680031142.01.T01:CDS
ACTACTTGAAACTCAAATGC+CGG 0.562943 6:+15059086 MsG0680031142.01.T01:CDS
TGGACGGTTGAGATGGAAAG+AGG 0.566051 6:-15055536 None:intergenic
GGGTTAAATGAATTTGCAGA+TGG 0.576660 6:+15056558 MsG0680031142.01.T01:CDS
GAATGGAGAGAAGCAAGGCT+TGG 0.577425 6:+15056834 MsG0680031142.01.T01:CDS
ATGAGTTACTTTCTTGTAAG+GGG 0.580836 6:+15055476 MsG0680031142.01.T01:CDS
TGATTATGTGAAGGATCTTG+TGG 0.583295 6:+15056908 MsG0680031142.01.T01:CDS
AAATGGGAGAAGAAAGGGTG+GGG 0.583617 6:+15055827 MsG0680031142.01.T01:CDS
TACAAGAAAGTAACTCATGT+TGG 0.584266 6:-15055471 None:intergenic
AGATTATAAAAGGCTTAAAG+GGG 0.589201 6:+15057030 MsG0680031142.01.T01:CDS
GTATTGGTGAGGAATGGAAG+GGG 0.589429 6:+15056961 MsG0680031142.01.T01:CDS
GGAGGGATTATTTCTAAGCA+AGG 0.590370 6:+15056297 MsG0680031142.01.T01:CDS
GATGCTCAAATTGTGTCCAT+TGG 0.594043 6:+15056654 MsG0680031142.01.T01:CDS
TGATGCAAGTGTTGATCCAA+TGG 0.595462 6:-15056670 None:intergenic
TGGTCTCAATTCAATTACCA+AGG 0.596923 6:+15058918 MsG0680031142.01.T01:CDS
AATTCAGAAATAGGCAACAA+GGG 0.599370 6:-15056870 None:intergenic
GCTGTTAGGAAAATGATGAA+AGG 0.599623 6:+15059357 MsG0680031142.01.T01:CDS
ATAAAAGCTGAAGGTGAAGA+GGG 0.599723 6:-15055871 None:intergenic
AAATAGAAATGGTATTGGTG+AGG 0.599881 6:+15056950 MsG0680031142.01.T01:CDS
TGTTAAGATTGATCCAACAT+GGG 0.601023 6:+15056410 MsG0680031142.01.T01:CDS
CAAGTAAATGATATCATGGA+CGG 0.601919 6:-15055552 None:intergenic
AGTATAGCGTTGACTGACAC+AGG 0.602283 6:-15055779 None:intergenic
ACAAGAGAGACAGTGGATTG+TGG 0.603183 6:+15056799 MsG0680031142.01.T01:CDS
AAATTCAGAAATAGGCAACA+AGG 0.609118 6:-15056871 None:intergenic
TTCAGTTACAACATGCTCGA+CGG 0.610352 6:+15059014 MsG0680031142.01.T01:intron
ATAGGATCATCGGAATTATG+TGG 0.618149 6:+15056772 MsG0680031142.01.T01:CDS
CCTCTGTAGTTAACTCCGAA+CGG 0.621278 6:-15055670 None:intergenic
AATTGATTGCAAGAGCTGCA+AGG 0.622581 6:+15056136 MsG0680031142.01.T01:CDS
GAATTCTGATTCAAAACATG+AGG 0.623180 6:+15055727 MsG0680031142.01.T01:CDS
GGTATTGGTGAGGAATGGAA+GGG 0.625965 6:+15056960 MsG0680031142.01.T01:CDS
GGTTGAGCAACAATCAAGCA+TGG 0.626482 6:+15055609 MsG0680031142.01.T01:CDS
CATTCTCAGATAAAAGCTGA+AGG 0.630816 6:-15055880 None:intergenic
TTGATTGTTGCTCAACCGAA+TGG 0.631891 6:-15055603 None:intergenic
TTGAAAGTCCCATCAAGCCA+AGG 0.642755 6:-15056243 None:intergenic
TGGTCTAACAAGAGAGACAG+TGG 0.644932 6:+15056792 MsG0680031142.01.T01:CDS
TCAATGCTATTGAGAAAACA+TGG 0.646799 6:+15058898 MsG0680031142.01.T01:CDS
ATAAATGGGAGAAGAAAGGG+TGG 0.652542 6:+15055825 MsG0680031142.01.T01:CDS
GAGGGATTATTTCTAAGCAA+GGG 0.654973 6:+15056298 MsG0680031142.01.T01:CDS
CGGCTGAATGGAGAGAAGCA+AGG 0.655431 6:+15056829 MsG0680031142.01.T01:CDS
TAAATGGGAGAAGAAAGGGT+GGG 0.659780 6:+15055826 MsG0680031142.01.T01:CDS
GTTAAGATTGATCCAACATG+GGG 0.660878 6:+15056411 MsG0680031142.01.T01:CDS
CCGTTCGGAGTTAACTACAG+AGG 0.688991 6:+15055670 MsG0680031142.01.T01:CDS
GCAGTGACGATGTGTTCTGA+AGG 0.690924 6:+15059237 MsG0680031142.01.T01:intron
ATGTGAAGGATCTTGTGGAG+TGG 0.691338 6:+15056913 MsG0680031142.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTTTAAAATTACATTAA+GGG + Chr6:15057907-15057926 MsG0680031142.01.T01:intron 10.0%
!!! TAACTTTTAAAATTACATTA+AGG + Chr6:15057906-15057925 MsG0680031142.01.T01:intron 10.0%
!!! TTAATGTAATTTTAAAAGTT+AGG - Chr6:15057907-15057926 None:intergenic 10.0%
!!! TTTTGTCAAAAATTATAAAA+GGG + Chr6:15057498-15057517 MsG0680031142.01.T01:intron 10.0%
!! AAAAAAGAAAAAAATTCCAA+TGG + Chr6:15055392-15055411 MsG0680031142.01.T01:CDS 15.0%
!! AATAATCATCATTGTATATT+AGG + Chr6:15056360-15056379 MsG0680031142.01.T01:CDS 15.0%
!! ATTTCTGTATGATAAAAAAT+GGG + Chr6:15056275-15056294 MsG0680031142.01.T01:CDS 15.0%
!! GAAAATAAAAATTCAGAAAT+AGG - Chr6:15056882-15056901 None:intergenic 15.0%
!! TCATTTAATAAAGCTATTAA+GGG - Chr6:15058430-15058449 None:intergenic 15.0%
!! TTCATTTAATAAAGCTATTA+AGG - Chr6:15058431-15058450 None:intergenic 15.0%
!!! AAATACCAATTTTACTTAAT+TGG - Chr6:15058488-15058507 None:intergenic 15.0%
!!! ACAATTTCATCTTATTTTTA+TGG - Chr6:15057986-15058005 None:intergenic 15.0%
!!! CTTTTGTCAAAAATTATAAA+AGG + Chr6:15057497-15057516 MsG0680031142.01.T01:intron 15.0%
!! AAAATCAAGTAAAGTATATG+TGG + Chr6:15059328-15059347 MsG0680031142.01.T01:CDS 20.0%
!! AAATTACTCATTGTAGAAAA+TGG + Chr6:15057423-15057442 MsG0680031142.01.T01:intron 20.0%
!! AAGATTATAAAAGGCTTAAA+GGG + Chr6:15057029-15057048 MsG0680031142.01.T01:CDS 20.0%
!! ACAAAGAAAGTTATAATCAA+AGG + Chr6:15057797-15057816 MsG0680031142.01.T01:intron 20.0%
!! CAAAGAAAGTTATAATCAAA+GGG + Chr6:15057798-15057817 MsG0680031142.01.T01:intron 20.0%
!! GATTTCTGTATGATAAAAAA+TGG + Chr6:15056274-15056293 MsG0680031142.01.T01:CDS 20.0%
!! TATATTTACTTACTAATGAC+AGG - Chr6:15059162-15059181 None:intergenic 20.0%
!! TCATTGAATTTACAATATAC+AGG + Chr6:15058636-15058655 MsG0680031142.01.T01:intron 20.0%
!! TTTCTGTATGATAAAAAATG+GGG + Chr6:15056276-15056295 MsG0680031142.01.T01:CDS 20.0%
!! TTTGACCAATTAAGTAAAAT+TGG + Chr6:15058480-15058499 MsG0680031142.01.T01:intron 20.0%
!! TTTGATTATAACTTTCTTTG+TGG - Chr6:15057798-15057817 None:intergenic 20.0%
!!! AAATTCTTAACCTTAACTTT+TGG - Chr6:15056204-15056223 None:intergenic 20.0%
!!! AAGATTTTACAGAAGATAAT+AGG + Chr6:15056754-15056773 MsG0680031142.01.T01:CDS 20.0%
!!! AATTGTTTCATCACTTTTTA+AGG + Chr6:15056056-15056075 MsG0680031142.01.T01:intron 20.0%
!!! ATAAAAAAGCACTTGTATTT+AGG - Chr6:15057369-15057388 None:intergenic 20.0%
!!! ATCAAAGAAAATTGTTTTGA+TGG + Chr6:15057579-15057598 MsG0680031142.01.T01:intron 20.0%
!!! ATTCAATGACTAATCTTTTA+TGG + Chr6:15057066-15057085 MsG0680031142.01.T01:intron 20.0%
!!! ATTTTGTGTTGAGTATAAAT+GGG + Chr6:15055811-15055830 MsG0680031142.01.T01:CDS 20.0%
!!! GGAATTTTTTTCTTTTTTAG+AGG - Chr6:15055390-15055409 None:intergenic 20.0%
!!! TAAAAAAGCACTTGTATTTA+GGG - Chr6:15057368-15057387 None:intergenic 20.0%
!!! TAAGGTTAAGAATTTTTTGA+AGG + Chr6:15056209-15056228 MsG0680031142.01.T01:CDS 20.0%
!!! TCAAAGAAAATTGTTTTGAT+GGG + Chr6:15057580-15057599 MsG0680031142.01.T01:intron 20.0%
!!! TTATGTTAATACTTCACTTT+TGG + Chr6:15057329-15057348 MsG0680031142.01.T01:intron 20.0%
!!! TTGTAGAAAATGGTATTTTA+AGG + Chr6:15057433-15057452 MsG0680031142.01.T01:intron 20.0%
! AAAAAATCAATGAGCAATTG+GGG + Chr6:15059391-15059410 MsG0680031142.01.T01:CDS 25.0%
! AAAAAGATTGAGACTTTCAT+AGG - Chr6:15058972-15058991 None:intergenic 25.0%
! AAGTCAAGTAAATGATATCA+TGG - Chr6:15055559-15055578 None:intergenic 25.0%
! AATCACAAGAACTTTAACAT+TGG - Chr6:15058859-15058878 None:intergenic 25.0%
! ACAAAAAATCAATGAGCAAT+TGG + Chr6:15059389-15059408 MsG0680031142.01.T01:CDS 25.0%
! AGATTATAAAAGGCTTAAAG+GGG + Chr6:15057030-15057049 MsG0680031142.01.T01:CDS 25.0%
! ATCAACAAATGGAATAATGA+AGG + Chr6:15059260-15059279 MsG0680031142.01.T01:CDS 25.0%
! ATCTTTATAAGTTGCATTCT+TGG + Chr6:15056529-15056548 MsG0680031142.01.T01:CDS 25.0%
! CAAAAAATCAATGAGCAATT+GGG + Chr6:15059390-15059409 MsG0680031142.01.T01:CDS 25.0%
! CAATTAAGAATTACAAACCT+TGG - Chr6:15058938-15058957 None:intergenic 25.0%
! CATTTATACTCAACACAAAA+TGG - Chr6:15055812-15055831 None:intergenic 25.0%
! GAAGATTATAAAAGGCTTAA+AGG + Chr6:15057028-15057047 MsG0680031142.01.T01:CDS 25.0%
! GTTGCATTGAAGATTATAAA+AGG + Chr6:15057020-15057039 MsG0680031142.01.T01:CDS 25.0%
! TCTTTATAAGTTGCATTCTT+GGG + Chr6:15056530-15056549 MsG0680031142.01.T01:CDS 25.0%
! TGATATGATTCCAAAAGTTA+AGG + Chr6:15056191-15056210 MsG0680031142.01.T01:CDS 25.0%
!! ACTATTCTTTTCTTTTGCAA+TGG + Chr6:15058803-15058822 MsG0680031142.01.T01:CDS 25.0%
!! AGATATTACATGTTTTCCAT+TGG - Chr6:15055411-15055430 None:intergenic 25.0%
!! AGTTCTTTTGAATGATGTTA+AGG - Chr6:15058032-15058051 None:intergenic 25.0%
!! ATACCATTTCTATTTAAAGC+AGG - Chr6:15056945-15056964 None:intergenic 25.0%
!! CATTTTGTGTTGAGTATAAA+TGG + Chr6:15055810-15055829 MsG0680031142.01.T01:CDS 25.0%
!! GAAGTATTAACATAAATGCA+AGG - Chr6:15057324-15057343 None:intergenic 25.0%
!! GCTTTAAATAGAAATGGTAT+TGG + Chr6:15056945-15056964 MsG0680031142.01.T01:CDS 25.0%
!! GTTCTTTTGAATGATGTTAA+GGG - Chr6:15058031-15058050 None:intergenic 25.0%
!! TTCAAGTATAATAGCATTGA+TGG - Chr6:15058156-15058175 None:intergenic 25.0%
!! TTCTTTTGAATGATGTTAAG+GGG - Chr6:15058030-15058049 None:intergenic 25.0%
!! TTGAAAGGTTTATGATGTTT+TGG + Chr6:15057123-15057142 MsG0680031142.01.T01:intron 25.0%
!! TTTACTTGATTTTCAGTGAA+TGG - Chr6:15059321-15059340 None:intergenic 25.0%
!!! CAAAGAAAATTGTTTTGATG+GGG + Chr6:15057581-15057600 MsG0680031142.01.T01:intron 25.0%
!!! TCATGTTTTGAATCAGAATT+CGG - Chr6:15055728-15055747 None:intergenic 25.0%
!!! TTTAAGTACAAAAGCATTGA+TGG + Chr6:15055932-15055951 MsG0680031142.01.T01:CDS 25.0%
AAAAATCAATGAGCAATTGG+GGG + Chr6:15059392-15059411 MsG0680031142.01.T01:CDS 30.0%
AAATCAAATGAATCCATGTC+CGG - Chr6:15059108-15059127 None:intergenic 30.0%
AAATGAATTTGCAGATGGAA+GGG + Chr6:15056563-15056582 MsG0680031142.01.T01:CDS 30.0%
AAATTCAGAAATAGGCAACA+AGG - Chr6:15056874-15056893 None:intergenic 30.0%
AAATTTGTGCAGCAAAAATG+TGG + Chr6:15056697-15056716 MsG0680031142.01.T01:CDS 30.0%
AACATTCAACTCTATGACTA+TGG + Chr6:15058607-15058626 MsG0680031142.01.T01:intron 30.0%
AATGATTCTAATGCTGAGTT+TGG + Chr6:15056324-15056343 MsG0680031142.01.T01:CDS 30.0%
AATTCAGAAATAGGCAACAA+GGG - Chr6:15056873-15056892 None:intergenic 30.0%
ACAGAAGATAATAGGATCAT+CGG + Chr6:15056762-15056781 MsG0680031142.01.T01:CDS 30.0%
AGTATAAATGGGAGAAGAAA+GGG + Chr6:15055822-15055841 MsG0680031142.01.T01:CDS 30.0%
AGTCCAAAGTTACATAAACA+AGG + Chr6:15058094-15058113 MsG0680031142.01.T01:intron 30.0%
ATAATGAAGGCCATTGAAAA+TGG + Chr6:15059273-15059292 MsG0680031142.01.T01:CDS 30.0%
ATCCTTGTACACAAATACAT+TGG - Chr6:15057216-15057235 None:intergenic 30.0%
ATTAAAAGCTGTAGATGAAG+AGG + Chr6:15058218-15058237 MsG0680031142.01.T01:intron 30.0%
CAAGTAAATGATATCATGGA+CGG - Chr6:15055555-15055574 None:intergenic 30.0%
CCTCTACAAAATTTACCATT+CGG + Chr6:15055588-15055607 MsG0680031142.01.T01:CDS 30.0%
CTGAAAGAAGAAACACATTA+TGG - Chr6:15058063-15058082 None:intergenic 30.0%
GAATTCTGATTCAAAACATG+AGG + Chr6:15055727-15055746 MsG0680031142.01.T01:CDS 30.0%
GGACTTGCAAAAATATAACA+AGG + Chr6:15057519-15057538 MsG0680031142.01.T01:intron 30.0%
TAAACAAGGTCAGTTTACAA+AGG + Chr6:15058108-15058127 MsG0680031142.01.T01:intron 30.0%
TAAATGAATTTGCAGATGGA+AGG + Chr6:15056562-15056581 MsG0680031142.01.T01:CDS 30.0%
TACAAGAAAGTAACTCATGT+TGG - Chr6:15055474-15055493 None:intergenic 30.0%
TCAATGCTATTGAGAAAACA+TGG + Chr6:15058898-15058917 MsG0680031142.01.T01:CDS 30.0%
TGTATGATAAAAAATGGGGA+GGG + Chr6:15056280-15056299 MsG0680031142.01.T01:CDS 30.0%
TGTTAAGATTGATCCAACAT+GGG + Chr6:15056410-15056429 MsG0680031142.01.T01:CDS 30.0%
TTAAAAGCTGTAGATGAAGA+GGG + Chr6:15058219-15058238 MsG0680031142.01.T01:intron 30.0%
TTATGGTAGATTGATTGCAA+GGG - Chr6:15057969-15057988 None:intergenic 30.0%
TTGTTAAGATTGATCCAACA+TGG + Chr6:15056409-15056428 MsG0680031142.01.T01:CDS 30.0%
TTTATGGTAGATTGATTGCA+AGG - Chr6:15057970-15057989 None:intergenic 30.0%
! ACATGAGTTACTTTCTTGTA+AGG + Chr6:15055474-15055493 MsG0680031142.01.T01:CDS 30.0%
! ATGAGTTACTTTCTTGTAAG+GGG + Chr6:15055476-15055495 MsG0680031142.01.T01:CDS 30.0%
! CAATCAATTTTCCAAAAGCA+TGG - Chr6:15056125-15056144 None:intergenic 30.0%
! CAATGACTAATCTTTTATGG+TGG + Chr6:15057069-15057088 MsG0680031142.01.T01:intron 30.0%
! CATGAATTTGATAGCACAAA+AGG + Chr6:15059047-15059066 MsG0680031142.01.T01:CDS 30.0%
! CATGAGTTACTTTCTTGTAA+GGG + Chr6:15055475-15055494 MsG0680031142.01.T01:CDS 30.0%
! CTCATCATGTTTCTATTACT+TGG + Chr6:15055996-15056015 MsG0680031142.01.T01:intron 30.0%
! CTTGAAATTGAGCTTTTCTT+TGG - Chr6:15057879-15057898 None:intergenic 30.0%
! CTTTTGTGCTATCAAATTCA+TGG - Chr6:15059049-15059068 None:intergenic 30.0%
! TGACCTTGTTTATGTAACTT+TGG - Chr6:15058100-15058119 None:intergenic 30.0%
! TGTTGCATTGATATCATTCA+TGG + Chr6:15057292-15057311 MsG0680031142.01.T01:intron 30.0%
! TTCAGATGTTGATTATGTGA+AGG + Chr6:15056899-15056918 MsG0680031142.01.T01:CDS 30.0%
! TTCTTGTTTGTTCTTGACAA+TGG - Chr6:15058288-15058307 None:intergenic 30.0%
! TTGCCTGCTTTAAATAGAAA+TGG + Chr6:15056939-15056958 MsG0680031142.01.T01:CDS 30.0%
!! AAATAGAAATGGTATTGGTG+AGG + Chr6:15056950-15056969 MsG0680031142.01.T01:CDS 30.0%
!! ATTCAAGTAAGGTGGTTTTA+GGG - Chr6:15058726-15058745 None:intergenic 30.0%
!! TTGAGTTGATGATTCAAGTA+AGG - Chr6:15058737-15058756 None:intergenic 30.0%
!!! ACAAAAGGTGCATTTTGATT+TGG + Chr6:15059062-15059081 MsG0680031142.01.T01:CDS 30.0%
!!! TCACTTTTTAAGGATGTTGA+AGG + Chr6:15056066-15056085 MsG0680031142.01.T01:intron 30.0%
AATCATCTCTTGCCCTTATT+TGG - Chr6:15059428-15059447 None:intergenic 35.0%
AATGTGGTGGCATGTTAAAA+AGG + Chr6:15056713-15056732 MsG0680031142.01.T01:CDS 35.0%
ACAAGAACTTTAACATTGGC+TGG - Chr6:15058855-15058874 None:intergenic 35.0%
ACATTAACCAAGTACAGTGT+CGG - Chr6:15057658-15057677 None:intergenic 35.0%
ACTACTTGAAACTCAAATGC+CGG + Chr6:15059086-15059105 MsG0680031142.01.T01:CDS 35.0%
AGGACTGCTATAACGTAAAA+TGG + Chr6:15057453-15057472 MsG0680031142.01.T01:intron 35.0%
AGTGGTTGCATGTAAGTATA+AGG - Chr6:15057688-15057707 None:intergenic 35.0%
ATAAAAGCTGAAGGTGAAGA+GGG - Chr6:15055874-15055893 None:intergenic 35.0%
ATACTATGCTGCATCATTGA+TGG + Chr6:15056617-15056636 MsG0680031142.01.T01:CDS 35.0%
ATAGGATCATCGGAATTATG+TGG + Chr6:15056772-15056791 MsG0680031142.01.T01:CDS 35.0%
ATATCACCATTAGATAAGCC+TGG - Chr6:15057724-15057743 None:intergenic 35.0%
ATTAAGGGAACAAACCTCTT+CGG + Chr6:15057922-15057941 MsG0680031142.01.T01:intron 35.0%
ATTACTTGGTACTCGTCAAA+GGG + Chr6:15056010-15056029 MsG0680031142.01.T01:intron 35.0%
CACCAATGTATTTGTGTACA+AGG + Chr6:15057211-15057230 MsG0680031142.01.T01:intron 35.0%
CATTCTCAGATAAAAGCTGA+AGG - Chr6:15055883-15055902 None:intergenic 35.0%
CTGTATGATAAAAAATGGGG+AGG + Chr6:15056279-15056298 MsG0680031142.01.T01:CDS 35.0%
GAGTATAAATGGGAGAAGAA+AGG + Chr6:15055821-15055840 MsG0680031142.01.T01:CDS 35.0%
GCTGTTAGGAAAATGATGAA+AGG + Chr6:15059357-15059376 MsG0680031142.01.T01:CDS 35.0%
GGGTTAAATGAATTTGCAGA+TGG + Chr6:15056558-15056577 MsG0680031142.01.T01:CDS 35.0%
GTAACTTTGGACTCTACAAA+TGG - Chr6:15058087-15058106 None:intergenic 35.0%
GTGTTAGTGCTTCATAGATT+TGG - Chr6:15058376-15058395 None:intergenic 35.0%
GTTAAGATTGATCCAACATG+GGG + Chr6:15056411-15056430 MsG0680031142.01.T01:CDS 35.0%
GTTACAGAGAGAGTCAAATA+AGG - Chr6:15055506-15055525 None:intergenic 35.0%
TACTATGCTGCATCATTGAT+GGG + Chr6:15056618-15056637 MsG0680031142.01.T01:CDS 35.0%
TATAAGTTGCATTCTTGGGT+TGG + Chr6:15056534-15056553 MsG0680031142.01.T01:CDS 35.0%
TATTACTTGGTACTCGTCAA+AGG + Chr6:15056009-15056028 MsG0680031142.01.T01:intron 35.0%
TGATTATGTGAAGGATCTTG+TGG + Chr6:15056908-15056927 MsG0680031142.01.T01:CDS 35.0%
TGGTCTCAATTCAATTACCA+AGG + Chr6:15058918-15058937 MsG0680031142.01.T01:CDS 35.0%
TTTATCCCGAACTCATGAAT+CGG + Chr6:15057844-15057863 MsG0680031142.01.T01:intron 35.0%
! AACTCAAGAGTGATAGTGTT+TGG + Chr6:15058750-15058769 MsG0680031142.01.T01:intron 35.0%
! AAGTAACTCATGTTGGTAGA+AGG - Chr6:15055467-15055486 None:intergenic 35.0%
! ATGCAACCACTCATGAATTT+TGG + Chr6:15057697-15057716 MsG0680031142.01.T01:intron 35.0%
! CCGAATGGTAAATTTTGTAG+AGG - Chr6:15055591-15055610 None:intergenic 35.0%
! GAAGTGTTTGAGACATTGAA+AGG + Chr6:15057108-15057127 MsG0680031142.01.T01:intron 35.0%
! GATTCAAGTAAGGTGGTTTT+AGG - Chr6:15058727-15058746 None:intergenic 35.0%
! GTTGGTAGAAGGAATATCTA+AGG - Chr6:15055456-15055475 None:intergenic 35.0%
! TGCAACCACTCATGAATTTT+GGG + Chr6:15057698-15057717 MsG0680031142.01.T01:intron 35.0%
!! AGTTGATGATTCAAGTAAGG+TGG - Chr6:15058734-15058753 None:intergenic 35.0%
!! GAGGGATTATTTCTAAGCAA+GGG + Chr6:15056298-15056317 MsG0680031142.01.T01:CDS 35.0%
!! TCTAATGCTGAGTTTGGTTT+TGG + Chr6:15056330-15056349 MsG0680031142.01.T01:CDS 35.0%
!! TGTTCTGAAGGATCAACAAA+TGG + Chr6:15059249-15059268 MsG0680031142.01.T01:CDS 35.0%
!! TTATGGTGGATTCATAGTAG+AGG + Chr6:15057083-15057102 MsG0680031142.01.T01:intron 35.0%
AAAAGGCTTAAAGGGGTTTG+AGG + Chr6:15057037-15057056 MsG0680031142.01.T01:intron 40.0%
AAAGAGCCGTTCGCTATATA+TGG + Chr6:15057765-15057784 MsG0680031142.01.T01:intron 40.0%
AAAGTTCACTCAAGTCCGTT+CGG + Chr6:15055655-15055674 MsG0680031142.01.T01:CDS 40.0%
AACGATGCAACATCGGAAAA+AGG + Chr6:15059462-15059481 MsG0680031142.01.T01:CDS 40.0%
AATTGATTGCAAGAGCTGCA+AGG + Chr6:15056136-15056155 MsG0680031142.01.T01:CDS 40.0%
ACGCTTAAACGATGCAACAT+CGG + Chr6:15059455-15059474 MsG0680031142.01.T01:CDS 40.0%
ACGTTGCCATATATAGCGAA+CGG - Chr6:15057774-15057793 None:intergenic 40.0%
ACTCGAATTATACGCGATTG+AGG + Chr6:15056499-15056518 MsG0680031142.01.T01:CDS 40.0%
AGCTCAAGCATATGCACTAT+TGG + Chr6:15056446-15056465 MsG0680031142.01.T01:CDS 40.0%
AGTTCGGGATAAACTTTGTC+GGG - Chr6:15057837-15057856 None:intergenic 40.0%
ATAAATGGGAGAAGAAAGGG+TGG + Chr6:15055825-15055844 MsG0680031142.01.T01:CDS 40.0%
ATAGTCCGATTCATGAGTTC+GGG - Chr6:15057852-15057871 None:intergenic 40.0%
ATATACAGGCTCTATACAGC+TGG + Chr6:15058650-15058669 MsG0680031142.01.T01:intron 40.0%
ATATGTGGCATCATGCTGTT+AGG + Chr6:15059343-15059362 MsG0680031142.01.T01:CDS 40.0%
CATAGTCCGATTCATGAGTT+CGG - Chr6:15057853-15057872 None:intergenic 40.0%
CATTAACCAAGTACAGTGTC+GGG - Chr6:15057657-15057676 None:intergenic 40.0%
GAGTTCGGGATAAACTTTGT+CGG - Chr6:15057838-15057857 None:intergenic 40.0%
GATAAAAGCTGAAGGTGAAG+AGG - Chr6:15055875-15055894 None:intergenic 40.0%
GATGCTCAAATTGTGTCCAT+TGG + Chr6:15056654-15056673 MsG0680031142.01.T01:CDS 40.0%
GATGGGACTTTCAATGGTAA+TGG + Chr6:15056252-15056271 MsG0680031142.01.T01:CDS 40.0%
GCTTGCTTTAATAGCTGAAG+AGG + Chr6:15056158-15056177 MsG0680031142.01.T01:CDS 40.0%
GGTGACACTGAGATCATTAT+AGG - Chr6:15055435-15055454 None:intergenic 40.0%
GGTGGCATGTTAAAAAGGAT+GGG + Chr6:15056718-15056737 MsG0680031142.01.T01:CDS 40.0%
GGTTGAAGGTAGCCAAATAA+GGG + Chr6:15059413-15059432 MsG0680031142.01.T01:CDS 40.0%
TAAATGGGAGAAGAAAGGGT+GGG + Chr6:15055826-15055845 MsG0680031142.01.T01:CDS 40.0%
TATCCGAATTGTGCCAGAAA+AGG - Chr6:15055696-15055715 None:intergenic 40.0%
TCAAGCATATGCACTATTGG+AGG + Chr6:15056449-15056468 MsG0680031142.01.T01:CDS 40.0%
TCATTGATGGGAATGGCTTA+TGG + Chr6:15056630-15056649 MsG0680031142.01.T01:CDS 40.0%
TGAAATCCAAAGACTGTAGC+TGG - Chr6:15058691-15058710 None:intergenic 40.0%
TGAAGGAGATGATTGAACCT+TGG + Chr6:15056226-15056245 MsG0680031142.01.T01:CDS 40.0%
TGGTGGCATGTTAAAAAGGA+TGG + Chr6:15056717-15056736 MsG0680031142.01.T01:CDS 40.0%
TTCAGTTACAACATGCTCGA+CGG + Chr6:15059014-15059033 MsG0680031142.01.T01:intron 40.0%
TTCTTGACAATGGAGAAGAG+CGG - Chr6:15058278-15058297 None:intergenic 40.0%
TTGATTGTTGCTCAACCGAA+TGG - Chr6:15055606-15055625 None:intergenic 40.0%
TTTGTGCAGCAAAAATGTGG+TGG + Chr6:15056700-15056719 MsG0680031142.01.T01:CDS 40.0%
! ACTACTTCATGCCATGCTTT+TGG + Chr6:15056111-15056130 MsG0680031142.01.T01:CDS 40.0%
! ATGATTGAACCTTGGCTTGA+TGG + Chr6:15056234-15056253 MsG0680031142.01.T01:CDS 40.0%
! GTCACAAGCTCCATTTTCAA+TGG - Chr6:15059286-15059305 None:intergenic 40.0%
! TGATTGAACCTTGGCTTGAT+GGG + Chr6:15056235-15056254 MsG0680031142.01.T01:CDS 40.0%
! TTAACTACAGAGGCCTTTTC+TGG + Chr6:15055680-15055699 MsG0680031142.01.T01:CDS 40.0%
!! AGCATTGATGGTGATCTTGT+TGG + Chr6:15055944-15055963 MsG0680031142.01.T01:CDS 40.0%
!! GAAATGGTATTGGTGAGGAA+TGG + Chr6:15056955-15056974 MsG0680031142.01.T01:CDS 40.0%
!! GGAGGGATTATTTCTAAGCA+AGG + Chr6:15056297-15056316 MsG0680031142.01.T01:CDS 40.0%
!! TGATGCAAGTGTTGATCCAA+TGG - Chr6:15056673-15056692 None:intergenic 40.0%
!! TTGGCATTGTTGCTGATTCA+TGG + Chr6:15055963-15055982 MsG0680031142.01.T01:CDS 40.0%
AAATGGGAGAAGAAAGGGTG+GGG + Chr6:15055827-15055846 MsG0680031142.01.T01:CDS 45.0%
AACATGAGGCTGTTCTTGAC+AGG + Chr6:15055741-15055760 MsG0680031142.01.T01:CDS 45.0%
AATGAGCAATTGGGGGTTGA+AGG + Chr6:15059399-15059418 MsG0680031142.01.T01:CDS 45.0%
ATGTGAAGGATCTTGTGGAG+TGG + Chr6:15056913-15056932 MsG0680031142.01.T01:CDS 45.0%
CCTCTGTAGTTAACTCCGAA+CGG - Chr6:15055673-15055692 None:intergenic 45.0%
CGAACTCATGAATCGGACTA+TGG + Chr6:15057851-15057870 MsG0680031142.01.T01:intron 45.0%
GATATCATGGACGGTTGAGA+TGG - Chr6:15055546-15055565 None:intergenic 45.0%
GCACTTGTATTTAGGGAGAC+AGG - Chr6:15057361-15057380 None:intergenic 45.0%
GGCTGGAAACTCATTTGCAA+AGG - Chr6:15058838-15058857 None:intergenic 45.0%
GGGTTGAAGGTAGCCAAATA+AGG + Chr6:15059412-15059431 MsG0680031142.01.T01:CDS 45.0%
GGGTTTGTGTTTGCTTTGCA+GGG + Chr6:15056981-15057000 MsG0680031142.01.T01:CDS 45.0%
GGTTGAGCAACAATCAAGCA+TGG + Chr6:15055609-15055628 MsG0680031142.01.T01:CDS 45.0%
GTTGAGATGGAAAGAGGAGT+TGG - Chr6:15055533-15055552 None:intergenic 45.0%
TGAAACTCAAATGCCGGACA+TGG + Chr6:15059092-15059111 MsG0680031142.01.T01:CDS 45.0%
TGCAGATGGAAGGGAACAAA+TGG + Chr6:15056572-15056591 MsG0680031142.01.T01:CDS 45.0%
TGCTGCATCATTGATGGGAA+TGG + Chr6:15056623-15056642 MsG0680031142.01.T01:CDS 45.0%
TGGATCAACACTTGCATCAC+TGG + Chr6:15056674-15056693 MsG0680031142.01.T01:CDS 45.0%
TGGCTTGATGGGACTTTCAA+TGG + Chr6:15056246-15056265 MsG0680031142.01.T01:CDS 45.0%
TGGTAGATTGATTGCAAGGG+CGG - Chr6:15057966-15057985 None:intergenic 45.0%
TGGTCTAACAAGAGAGACAG+TGG + Chr6:15056792-15056811 MsG0680031142.01.T01:CDS 45.0%
TTATACTTCCTGCCCCATGT+TGG - Chr6:15056426-15056445 None:intergenic 45.0%
TTGAAAGTCCCATCAAGCCA+AGG - Chr6:15056246-15056265 None:intergenic 45.0%
TTGGATCCAGCTACAGTCTT+TGG + Chr6:15058682-15058701 MsG0680031142.01.T01:intron 45.0%
TTTGGGCCAGGCTTATCTAA+TGG + Chr6:15057715-15057734 MsG0680031142.01.T01:intron 45.0%
! ACAATGGAGAAGAGCGGTTT+TGG - Chr6:15058272-15058291 None:intergenic 45.0%
! GTATTGGTGAGGAATGGAAG+GGG + Chr6:15056961-15056980 MsG0680031142.01.T01:CDS 45.0%
!! AAGTTGCATTCTTGGGTTGG+AGG + Chr6:15056537-15056556 MsG0680031142.01.T01:CDS 45.0%
!! ACAAGAGAGACAGTGGATTG+TGG + Chr6:15056799-15056818 MsG0680031142.01.T01:CDS 45.0%
!! AGCATTGATGGAGAGCTTGT+TGG - Chr6:15058144-15058163 None:intergenic 45.0%
!! AGGCCTTTTCTGGCACAATT+CGG + Chr6:15055690-15055709 MsG0680031142.01.T01:CDS 45.0%
!! AGTATAGCGTTGACTGACAC+AGG - Chr6:15055782-15055801 None:intergenic 45.0%
!! AGTTGCATTCTTGGGTTGGA+GGG + Chr6:15056538-15056557 MsG0680031142.01.T01:CDS 45.0%
!! GAGAGCTTGTTGGTGATTCA+TGG - Chr6:15058134-15058153 None:intergenic 45.0%
!! GGTATTGGTGAGGAATGGAA+GGG + Chr6:15056960-15056979 MsG0680031142.01.T01:CDS 45.0%
!! GTTTTGATGGGGCACAAAGA+AGG + Chr6:15057592-15057611 MsG0680031142.01.T01:intron 45.0%
!! TGGTATTGGTGAGGAATGGA+AGG + Chr6:15056959-15056978 MsG0680031142.01.T01:CDS 45.0%
!!! AATGTTAATTTTTTTTTTTA+TGG - Chr6:15058593-15058612 None:intergenic 5.0%
AGATTGATCCAACATGGGGC+AGG + Chr6:15056415-15056434 MsG0680031142.01.T01:CDS 50.0%
CCGTTCGGAGTTAACTACAG+AGG + Chr6:15055670-15055689 MsG0680031142.01.T01:CDS 50.0%
CCTGGCCCAAAATTCATGAG+TGG - Chr6:15057706-15057725 None:intergenic 50.0%
CTTGCTTCTCTCCATTCAGC+CGG - Chr6:15056831-15056850 None:intergenic 50.0%
GAATGGAGAGAAGCAAGGCT+TGG + Chr6:15056834-15056853 MsG0680031142.01.T01:CDS 50.0%
GCAGTGACGATGTGTTCTGA+AGG + Chr6:15059237-15059256 MsG0680031142.01.T01:intron 50.0%
GGGGTTTGTGTTTGCTTTGC+AGG + Chr6:15056980-15056999 MsG0680031142.01.T01:CDS 50.0%
GTAGCTGGATCCAATCGACT+AGG - Chr6:15058676-15058695 None:intergenic 50.0%
TAGCATCCCGACACTGTACT+TGG + Chr6:15057648-15057667 MsG0680031142.01.T01:intron 50.0%
TGGACGGTTGAGATGGAAAG+AGG - Chr6:15055539-15055558 None:intergenic 50.0%
! ATACAGCTGGCCTAGTCGAT+TGG + Chr6:15058663-15058682 MsG0680031142.01.T01:intron 50.0%
! CCACTCATGAATTTTGGGCC+AGG + Chr6:15057703-15057722 MsG0680031142.01.T01:intron 50.0%
! GGCTTAAAGGGGTTTGAGGT+AGG + Chr6:15057041-15057060 MsG0680031142.01.T01:intron 50.0%
! GTACAGTGTCGGGATGCTAT+CGG - Chr6:15057647-15057666 None:intergenic 50.0%
! TACAGTGTCGGGATGCTATC+GGG - Chr6:15057646-15057665 None:intergenic 50.0%
!! ATGGAGAAGAGCGGTTTTGG+TGG - Chr6:15058269-15058288 None:intergenic 50.0%
!! CAGTGGATTGTGGTTTGCTC+CGG + Chr6:15056809-15056828 MsG0680031142.01.T01:CDS 50.0%
CGGCTGAATGGAGAGAAGCA+AGG + Chr6:15056829-15056848 MsG0680031142.01.T01:CDS 55.0%
GATTGATTGCAAGGGCGGCA+AGG - Chr6:15057961-15057980 None:intergenic 55.0%
!! GTTGGCTTTGATGGCCGAAG+AGG - Chr6:15057939-15057958 None:intergenic 55.0%
!! TGTGGTTTGCTCCGGCTGAA+TGG + Chr6:15056817-15056836 MsG0680031142.01.T01:CDS 55.0%
GATTGCAAGGGCGGCAAGGT+TGG - Chr6:15057957-15057976 None:intergenic 60.0%
!! GGCGGCAAGGTTGGCTTTGA+TGG - Chr6:15057948-15057967 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr6 gene 15055380 15059503 15055380 ID=MsG0680031142.01;Name=MsG0680031142.01
Chr6 mRNA 15055380 15059503 15055380 ID=MsG0680031142.01.T01;Parent=MsG0680031142.01;Name=MsG0680031142.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|0.75|0.8|5|0|730
Chr6 exon 15055380 15056003 15055380 ID=MsG0680031142.01.T01:exon:10191;Parent=MsG0680031142.01.T01
Chr6 exon 15056078 15057051 15056078 ID=MsG0680031142.01.T01:exon:10192;Parent=MsG0680031142.01.T01
Chr6 exon 15058758 15058939 15058758 ID=MsG0680031142.01.T01:exon:10193;Parent=MsG0680031142.01.T01
Chr6 exon 15059019 15059168 15059019 ID=MsG0680031142.01.T01:exon:10194;Parent=MsG0680031142.01.T01
Chr6 exon 15059241 15059503 15059241 ID=MsG0680031142.01.T01:exon:10195;Parent=MsG0680031142.01.T01
Chr6 CDS 15055380 15056003 15055380 ID=MsG0680031142.01.T01:cds;Parent=MsG0680031142.01.T01
Chr6 CDS 15056078 15057051 15056078 ID=MsG0680031142.01.T01:cds;Parent=MsG0680031142.01.T01
Chr6 CDS 15058758 15058939 15058758 ID=MsG0680031142.01.T01:cds;Parent=MsG0680031142.01.T01
Chr6 CDS 15059019 15059168 15059019 ID=MsG0680031142.01.T01:cds;Parent=MsG0680031142.01.T01
Chr6 CDS 15059241 15059503 15059241 ID=MsG0680031142.01.T01:cds;Parent=MsG0680031142.01.T01
Gene Sequence

>MsG0680031142.01.T01

ATGACTTCCTCTAAAAAAGAAAAAAATTCCAATGGAAAACATGTAATATCTTCCTATAATGATCTCAGTGTCACCTTAGATATTCCTTCTACCAACATGAGTTACTTTCTTGTAAGGGGAAGTCCTTATTTGACTCTCTCTGTAACAAAACCAACTCCTCTTTCCATCTCAACCGTCCATGATATCATTTACTTGACTTCAAATGATTCCTCTACAAAATTTACCATTCGGTTGAGCAACAATCAAGCATGGATACTTTATGCTTCAATAAAAGTAAAGTTCACTCAAGTCCGTTCGGAGTTAACTACAGAGGCCTTTTCTGGCACAATTCGGATAGCTGTGTTGCCGAATTCTGATTCAAAACATGAGGCTGTTCTTGACAGGTACTGTTTCTGTTATCCTGTGTCAGTCAACGCTATACTCAGAGAACCATTTTGTGTTGAGTATAAATGGGAGAAGAAAGGGTGGGGTGATTTGTTGATGTTAGCACACCCTCTTCACCTTCAGCTTTTATCTGAGAATGATTGTAATAATCTTACTGTTTTGAATGATTTTAAGTACAAAAGCATTGATGGTGATCTTGTTGGCATTGTTGCTGATTCATGGATTTTGAAAACTCATCATGATGTTGAAGGCTTGAATTCATCGTCAATAAAAACTACTTCATGCCATGCTTTTGGAAAATTGATTGCAAGAGCTGCAAGGCTTGCTTTAATAGCTGAAGAGGTTTTTTTCTATGATATGATTCCAAAAGTTAAGGTTAAGAATTTTTTGAAGGAGATGATTGAACCTTGGCTTGATGGGACTTTCAATGGTAATGGATTTCTGTATGATAAAAAATGGGGAGGGATTATTTCTAAGCAAGGGTGTAATGATTCTAATGCTGAGTTTGGTTTTGGAATTTATAATAATCATCATTGTATATTAGGATATTTTGTTTATGCAATTGCTGTTCTTGTTAAGATTGATCCAACATGGGGCAGGAAGTATAAAGCTCAAGCATATGCACTATTGGAGGATTTTATGAACTTGAGCACAAGTTTGAACTCGAATTATACGCGATTGAGGTGTTTTGATCTTTATAAGTTGCATTCTTGGGTTGGAGGGTTAAATGAATTTGCAGATGGAAGGGAACAAATGGCAAGTAGTGAAGCTGTAAAAGCATACTATGCTGCATCATTGATGGGAATGGCTTATGGTGATGCTCAAATTGTGTCCATTGGATCAACACTTGCATCACTGGAAATTTGTGCAGCAAAAATGTGGTGGCATGTTAAAAAGGATGGGAAGCTTTATGAAAAAGATTTTACAGAAGATAATAGGATCATCGGAATTATGTGGTCTAACAAGAGAGACAGTGGATTGTGGTTTGCTCCGGCTGAATGGAGAGAAGCAAGGCTTGGTGCGCAAGTTTTACCCTTGTTGCCTATTTCTGAATTTTTATTTTCAGATGTTGATTATGTGAAGGATCTTGTGGAGTGGACATTGCCTGCTTTAAATAGAAATGGTATTGGTGAGGAATGGAAGGGGTTTGTGTTTGCTTTGCAGGGAATTTATGACAGTGAAGTTGCATTGAAGATTATAAAAGGCTTAAAGGGAGTGATAGTGTTTGGTTTCTTGTTCACTCTTTCACTTTACAAACAACTATTCTTTTCTTTTGCAATGGCTTTTTTTTCCTTTGCAAATGAGTTTCCAGCCAATGTTAAAGTTCTTGTGATTGATCATGATATTGATCTTCTCAATGCTATTGAGAAAACATGGTCTCAATTCAATTACCAAGTTACAACATGCTCGACGGTTTCTTCAGCCATGAATTTGATAGCACAAAAGGTGCATTTTGATTTGGTACTACTTGAAACTCAAATGCCGGACATGGATTCATTTGATTTCTTGCAACAATTGACACAACAAATCAATATTCCTGTCATTATGACGATGTGTTCTGAAGGATCAACAAATGGAATAATGAAGGCCATTGAAAATGGAGCTTGTGACTGTTTTGTCAAGCCATTCACTGAAAATCAAGTAAAGTATATGTGGCATCATGCTGTTAGGAAAATGATGAAAGGAAATAAAAAACAAAAAATCAATGAGCAATTGGGGGTTGAAGGTAGCCAAATAAGGGCAAGAGATGATTCAAATTTACGCTTAAACGATGCAACATCGGAAAAAGGTGACAAAGAAAAAGTGTAA
Protein sequence

>MsG0680031142.01.T01

MTSSKKEKNSNGKHVISSYNDLSVTLDIPSTNMSYFLVRGSPYLTLSVTKPTPLSISTVHDIIYLTSNDSSTKFTIRLSNNQAWILYASIKVKFTQVRSELTTEAFSGTIRIAVLPNSDSKHEAVLDRYCFCYPVSVNAILREPFCVEYKWEKKGWGDLLMLAHPLHLQLLSENDCNNLTVLNDFKYKSIDGDLVGIVADSWILKTHHDVEGLNSSSIKTTSCHAFGKLIARAARLALIAEEVFFYDMIPKVKVKNFLKEMIEPWLDGTFNGNGFLYDKKWGGIISKQGCNDSNAEFGFGIYNNHHCILGYFVYAIAVLVKIDPTWGRKYKAQAYALLEDFMNLSTSLNSNYTRLRCFDLYKLHSWVGGLNEFADGREQMASSEAVKAYYAASLMGMAYGDAQIVSIGSTLASLEICAAKMWWHVKKDGKLYEKDFTEDNRIIGIMWSNKRDSGLWFAPAEWREARLGAQVLPLLPISEFLFSDVDYVKDLVEWTLPALNRNGIGEEWKGFVFALQGIYDSEVALKIIKGLKGVIVFGFLFTLSLYKQLFFSFAMAFFSFANEFPANVKVLVIDHDIDLLNAIEKTWSQFNYQVTTCSTVSSAMNLIAQKVHFDLVLLETQMPDMDSFDFLQQLTQQINIPVIMTMCSEGSTNGIMKAIENGACDCFVKPFTENQVKYMWHHAVRKMMKGNKKQKINEQLGVEGSQIRARDDSNLRLNDATSEKGDKEKV*