AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680031534.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031534.01.T01 MTR_0036s0260 79.167 72 15 0 113 184 24 95 1.08e-33 119
MsG0680031534.01.T01 MTR_2g090305 76.389 72 17 0 113 184 24 95 2.67e-31 112
MsG0680031534.01.T01 MTR_2g100930 69.014 71 22 0 116 186 108 178 7.34e-31 115
MsG0680031534.01.T01 MTR_4g100630 65.823 79 27 0 106 184 84 162 9.24e-31 114
MsG0680031534.01.T01 MTR_5g037080 78.667 75 16 0 116 190 101 175 2.04e-30 113
MsG0680031534.01.T01 MTR_6g092540 71.212 66 19 0 116 181 96 161 1.03e-28 108
MsG0680031534.01.T01 MTR_4g107230 90.141 71 7 0 116 186 83 153 1.36e-28 108
MsG0680031534.01.T01 MTR_4g111975 67.647 68 22 0 116 183 137 204 7.04e-27 103
MsG0680031534.01.T01 MTR_8g101650 68.182 66 20 1 116 181 104 168 1.84e-26 102
MsG0680031534.01.T01 MTR_1g111830 66.176 68 23 0 116 183 123 190 7.48e-26 100
MsG0680031534.01.T01 MTR_5g069710 66.176 68 23 0 116 183 131 198 1.37e-25 100
MsG0680031534.01.T01 MTR_3g462790 66.176 68 23 0 116 183 146 213 1.39e-25 100
MsG0680031534.01.T01 MTR_7g067080 57.692 78 33 0 105 182 128 205 8.64e-25 98.6
MsG0680031534.01.T01 MTR_5g081860 52.128 94 36 2 95 186 110 196 1.74e-23 94.4
MsG0680031534.01.T01 MTR_3g104370 51.765 85 35 2 112 193 86 167 1.05e-21 89.0
MsG0680031534.01.T01 MTR_8g063600 57.971 69 27 1 116 182 105 173 2.54e-20 86.3
MsG0680031534.01.T01 MTR_8g063870 50.649 77 36 1 108 182 83 159 4.24e-18 80.1
MsG0680031534.01.T01 MTR_5g027570 43.678 87 43 2 102 182 73 159 8.41e-17 75.9
MsG0680031534.01.T01 MTR_4g015130 60.714 56 22 0 127 182 3 58 9.61e-17 72.0
MsG0680031534.01.T01 MTR_5g088010 45.679 81 38 2 117 191 60 140 3.13e-16 74.7
MsG0680031534.01.T01 MTR_1g033620 66.667 51 17 0 133 183 21 71 1.34e-15 72.8
MsG0680031534.01.T01 MTR_5g088060 43.750 96 47 3 102 191 258 352 1.41e-15 74.3
MsG0680031534.01.T01 MTR_5g488160 43.750 96 47 3 102 191 258 352 1.41e-15 74.3
MsG0680031534.01.T01 MTR_5g027550 48.000 75 33 2 119 187 79 153 2.18e-14 69.3
MsG0680031534.01.T01 MTR_1g048660 49.206 63 32 0 119 181 14 76 2.27e-14 66.2
MsG0680031534.01.T01 MTR_1g105785 50.000 78 30 2 9 77 422 499 9.69e-14 69.3
MsG0680031534.01.T01 MTR_7g051400 44.872 78 34 1 9 77 400 477 2.07e-12 65.1
MsG0680031534.01.T01 MTR_3g070110 47.222 72 31 1 119 183 97 168 2.78e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680031534.01.T01 AT5G47390 74.648 71 18 0 116 186 95 165 1.82e-32 120
MsG0680031534.01.T01 AT1G49010 63.636 77 28 0 116 192 133 209 9.68e-28 106
MsG0680031534.01.T01 AT1G70000 69.048 84 25 1 104 187 86 168 3.85e-27 103
MsG0680031534.01.T01 AT1G70000 69.048 84 25 1 104 187 86 168 3.85e-27 103
MsG0680031534.01.T01 AT5G08520 56.818 88 37 1 96 183 98 184 1.45e-26 103
MsG0680031534.01.T01 AT5G04760 59.494 79 32 0 105 183 87 165 2.84e-26 100
MsG0680031534.01.T01 AT2G38090 60.494 81 25 1 103 183 134 207 4.17e-26 102
MsG0680031534.01.T01 AT5G58900 52.273 88 42 0 96 183 120 207 7.94e-26 100
MsG0680031534.01.T01 AT1G74840 68.539 89 28 0 99 187 78 166 8.63e-26 99.8
MsG0680031534.01.T01 AT1G74840 68.539 89 28 0 99 187 78 166 8.96e-26 100
MsG0680031534.01.T01 AT5G56840 60.563 71 27 1 114 183 88 158 4.90e-25 97.8
MsG0680031534.01.T01 AT3G16350 68.056 72 23 0 116 187 136 207 1.15e-24 99.4
MsG0680031534.01.T01 AT1G19000 78.873 71 15 0 116 186 101 171 1.60e-24 97.4
MsG0680031534.01.T01 AT1G19000 78.873 71 15 0 116 186 101 171 1.60e-24 97.4
MsG0680031534.01.T01 AT5G61620 54.762 84 37 1 102 184 92 175 7.24e-24 96.3
MsG0680031534.01.T01 AT5G01200 42.735 117 43 2 67 183 120 212 1.14e-23 94.7
MsG0680031534.01.T01 AT3G11280 58.333 72 30 0 116 187 126 197 5.72e-23 92.8
MsG0680031534.01.T01 AT3G11280 58.333 72 30 0 116 187 126 197 5.72e-23 92.8
MsG0680031534.01.T01 AT5G05790 61.765 68 26 0 116 183 130 197 2.04e-22 91.7
MsG0680031534.01.T01 AT5G05790 61.765 68 26 0 116 183 130 197 2.04e-22 91.7
MsG0680031534.01.T01 AT3G10580 50.649 77 36 1 106 182 84 158 1.10e-18 81.3
MsG0680031534.01.T01 AT3G10580 50.649 77 36 1 106 182 84 158 1.90e-18 81.3
MsG0680031534.01.T01 AT4G09450 37.931 116 62 2 79 187 49 161 4.95e-18 78.6
MsG0680031534.01.T01 AT5G23650 55.224 67 30 0 116 182 119 185 4.82e-17 78.2
MsG0680031534.01.T01 AT3G10590 50.000 68 33 1 119 186 113 179 2.44e-16 74.3

Find 39 sgRNAs with CRISPR-Local

Find 344 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTCTATGGCGGCCGAAAA+TGG 0.315265 6:-21813365 MsG0680031534.01.T01:intron
GATCAATCAATATGCAATTC+TGG 0.333551 6:-21816336 MsG0680031534.01.T01:CDS
ACCCCATGCAGCAAGATTAC+TGG 0.347137 6:-21815937 MsG0680031534.01.T01:CDS
GGTTAACCTTACGGATGCTT+TGG 0.360200 6:-21816004 MsG0680031534.01.T01:CDS
CGTAAGGTTAACCATTGTAT+TGG 0.368465 6:+21816014 None:intergenic
TTGGTTGGATTGCAGAAAGT+TGG 0.394483 6:-21810771 MsG0680031534.01.T01:CDS
TCCCAGTAATCTTGCTGCAT+GGG 0.396909 6:+21815935 None:intergenic
CTTCAAACTTGACTTCCATA+TGG 0.406172 6:+21813761 None:intergenic
TGTTTCTACAAAGAGATTGC+CGG 0.433250 6:+21810588 None:intergenic
TTCCCAGTAATCTTGCTGCA+TGG 0.435303 6:+21815934 None:intergenic
TGATCTGGTCTCCAAAATCA+TGG 0.440928 6:+21816354 None:intergenic
GAATTGCATATTGATTGATC+TGG 0.444697 6:+21816339 None:intergenic
CGATGACAAGGATAAAGAAA+TGG 0.451211 6:-21815965 MsG0680031534.01.T01:CDS
AGAAAGTTGGAAAAGGTGAT+AGG 0.453364 6:-21810758 MsG0680031534.01.T01:CDS
CAATACAATGGTTAACCTTA+CGG 0.454620 6:-21816013 MsG0680031534.01.T01:CDS
AAATCATGGGAAAACATCAT+TGG 0.478648 6:+21816368 None:intergenic
GAAATGTGAAATTATCCATA+TGG 0.491863 6:-21813776 MsG0680031534.01.T01:CDS
CCCAAAACAAAATCGATTTG+AGG 0.503070 6:-21816309 MsG0680031534.01.T01:intron
CCCCATGCAGCAAGATTACT+GGG 0.511280 6:-21815936 MsG0680031534.01.T01:CDS
AGTGGTGATATCATAGAGAC+TGG 0.518743 6:+21810626 None:intergenic
GCAGCAAGATTACTGGGAAA+AGG 0.519001 6:-21815930 MsG0680031534.01.T01:CDS
CCCAGTAATCTTGCTGCATG+GGG 0.536468 6:+21815936 None:intergenic
GGATTGCAGAAAGTTGGAAA+AGG 0.553347 6:-21810765 MsG0680031534.01.T01:CDS
TGCTGGTTCATCCAATACAA+TGG 0.571914 6:-21816025 MsG0680031534.01.T01:CDS
GATCTGGTCTCCAAAATCAT+GGG 0.573741 6:+21816355 None:intergenic
TGTCATCGTTGTTAGTCACA+TGG 0.579910 6:+21815980 None:intergenic
GACGGCGATTGAGATTACTT+TGG 0.589287 6:+21810658 None:intergenic
TATCATAGAGACTGGATCTA+CGG 0.592657 6:+21810634 None:intergenic
TGGATCAGGGATTCTGTGGA+CGG 0.602297 6:-21810814 MsG0680031534.01.T01:intron
CTATGATATCACCACTGACA+CGG 0.608553 6:-21810619 MsG0680031534.01.T01:CDS
GTTGGAAAAGGTGATAGGAG+AGG 0.613085 6:-21810753 MsG0680031534.01.T01:CDS
TGAATGGATCAGGGATTCTG+TGG 0.615528 6:-21810818 MsG0680031534.01.T01:intron
GCATGACTTGCAACCTGCGT+AGG 0.620867 6:+21810699 None:intergenic
GTGATAGGAGAGGAATCTCA+AGG 0.624002 6:-21810743 MsG0680031534.01.T01:CDS
CATGGTCCAAAGCATCCGTA+AGG 0.626535 6:+21815998 None:intergenic
GAAAACAAGAACGCCTACGC+AGG 0.639644 6:-21810712 MsG0680031534.01.T01:CDS
TGTGACTAACAACGATGACA+AGG 0.658600 6:-21815977 MsG0680031534.01.T01:CDS
ATCAGGGATTCTGTGGACGG+AGG 0.677291 6:-21810811 MsG0680031534.01.T01:intron
AGAGACTGGATCTACGGCGA+CGG 0.700084 6:+21810640 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATCAATAATCAAAATAA+AGG + Chr6:21814260-21814279 None:intergenic 10.0%
!! AAATCAATAATCAAAATAAA+GGG + Chr6:21814259-21814278 None:intergenic 10.0%
!! AAATTAAAACTAATAACATT+TGG + Chr6:21815088-21815107 None:intergenic 10.0%
!! AATAATTAATTTACGAAATA+AGG - Chr6:21811772-21811791 MsG0680031534.01.T01:intron 10.0%
!! AATTAAAACTAATAACATTT+GGG + Chr6:21815087-21815106 None:intergenic 10.0%
!! ATTTACAAAAGAATAATAAA+AGG + Chr6:21815026-21815045 None:intergenic 10.0%
!! CTTGTTAAAAAATTAAATTT+CGG + Chr6:21811503-21811522 None:intergenic 10.0%
!! TATAGATTATGAAATATAAA+TGG - Chr6:21811402-21811421 MsG0680031534.01.T01:intron 10.0%
!!! AAATGTTATTAGTTTTAATT+TGG - Chr6:21815087-21815106 MsG0680031534.01.T01:intron 10.0%
!!! AATTTTAATTAGTTATTTCA+AGG - Chr6:21813084-21813103 MsG0680031534.01.T01:intron 10.0%
!!! ATTTTAATTGAAAAAACATT+AGG + Chr6:21812993-21813012 None:intergenic 10.0%
!!! TGTAAAATTTGTTTAAAAAT+TGG + Chr6:21815328-21815347 None:intergenic 10.0%
!! AAAAAATTAAATTTCGGAAA+AGG + Chr6:21811497-21811516 None:intergenic 15.0%
!! AAATATATAATGTTCAGAAA+AGG + Chr6:21814071-21814090 None:intergenic 15.0%
!! TGTATTATTTACAAGATAAA+GGG - Chr6:21811645-21811664 MsG0680031534.01.T01:intron 15.0%
!! TTCGTAAATTAATTATTCAA+AGG + Chr6:21811769-21811788 None:intergenic 15.0%
!!! AGACTTTTGATTATTATATT+AGG - Chr6:21814293-21814312 MsG0680031534.01.T01:intron 15.0%
!!! TATAACTTATCAATGATTTT+AGG - Chr6:21814600-21814619 MsG0680031534.01.T01:intron 15.0%
!!! TATTTGAAATCAAAATTTTG+AGG - Chr6:21815745-21815764 MsG0680031534.01.T01:intron 15.0%
!!! TGAATTAATAATTTGTGTAA+CGG + Chr6:21812222-21812241 None:intergenic 15.0%
!!! TGTATTTTGTTTTCTTATTT+TGG - Chr6:21813249-21813268 MsG0680031534.01.T01:intron 15.0%
!!! TTTCAATTATTTGAAATTGT+AGG + Chr6:21814686-21814705 None:intergenic 15.0%
!!! TTTTTTTTTGTACAGTTTTA+AGG + Chr6:21814132-21814151 None:intergenic 15.0%
!! AAAAAAAAAATAAGGTGAGA+CGG + Chr6:21813529-21813548 None:intergenic 20.0%
!! AAAGCAAAAATGAAGTAATT+AGG + Chr6:21813929-21813948 None:intergenic 20.0%
!! AAATACGATAAAAATAGATG+AGG + Chr6:21813737-21813756 None:intergenic 20.0%
!! AAGCAAAAATGAAGTAATTA+GGG + Chr6:21813928-21813947 None:intergenic 20.0%
!! ATAAGTGACTTAATACAATT+GGG + Chr6:21812562-21812581 None:intergenic 20.0%
!! ATAATCAAAATAAAGGGAAA+TGG + Chr6:21814253-21814272 None:intergenic 20.0%
!! ATATTAATTGTCTAGAGAAA+AGG + Chr6:21815651-21815670 None:intergenic 20.0%
!! ATGACTATTAACAAAATTCA+AGG - Chr6:21812332-21812351 MsG0680031534.01.T01:intron 20.0%
!! ATTTCAATCAATTCAAACAA+AGG + Chr6:21816090-21816109 None:intergenic 20.0%
!! ATTTCTAAACTTAATCAATG+TGG + Chr6:21815954-21815973 None:intergenic 20.0%
!! GAAATAAGGTATACATATTT+GGG - Chr6:21811812-21811831 MsG0680031534.01.T01:intron 20.0%
!! GATTATTATATTAGGTAACT+TGG - Chr6:21814301-21814320 MsG0680031534.01.T01:intron 20.0%
!! GCTAAAATTAATTATTCTCA+AGG - Chr6:21811614-21811633 MsG0680031534.01.T01:intron 20.0%
!! GTGCTGAAAAAAAAAAAATA+AGG + Chr6:21813537-21813556 None:intergenic 20.0%
!! GTGTATTATTTACAAGATAA+AGG - Chr6:21811644-21811663 MsG0680031534.01.T01:intron 20.0%
!! TACTAAAGTAGAAATTATTC+AGG - Chr6:21815857-21815876 MsG0680031534.01.T01:intron 20.0%
!! TAGTTGTAAAATGAAAAACA+CGG + Chr6:21813327-21813346 None:intergenic 20.0%
!! TATAAGTGACTTAATACAAT+TGG + Chr6:21812563-21812582 None:intergenic 20.0%
!! TATTAATTGTCTAGAGAAAA+GGG + Chr6:21815650-21815669 None:intergenic 20.0%
!! TGTCTTCTATTGAATTTAAA+CGG + Chr6:21812287-21812306 None:intergenic 20.0%
!! TTAAAATTCTTCATCTTATC+TGG - Chr6:21813006-21813025 MsG0680031534.01.T01:intron 20.0%
!! TTTGTTTAATTCCAAAACTT+TGG - Chr6:21811219-21811238 MsG0680031534.01.T01:intron 20.0%
!!! AAACAAATTTTACAACCTTT+TGG - Chr6:21815334-21815353 MsG0680031534.01.T01:intron 20.0%
!!! AAAGTAAGTACAATTTTAAC+TGG + Chr6:21813686-21813705 None:intergenic 20.0%
!!! AAGTAAGTACAATTTTAACT+GGG + Chr6:21813685-21813704 None:intergenic 20.0%
!!! TACTTTTTTTGTAGTTCTAA+AGG - Chr6:21813700-21813719 MsG0680031534.01.T01:intron 20.0%
!!! TATCGTATTTCTTATTTTAC+AGG - Chr6:21813747-21813766 MsG0680031534.01.T01:CDS 20.0%
!!! TGTTATTGATTTTCTTTGAA+TGG - Chr6:21816124-21816143 MsG0680031534.01.T01:intron 20.0%
!!! TTTTCTCTAGACAATTAATA+TGG - Chr6:21815650-21815669 MsG0680031534.01.T01:intron 20.0%
!!! TTTTTAGATGTTCATATCAT+AGG - Chr6:21813277-21813296 MsG0680031534.01.T01:intron 20.0%
! AAAAAATGTTTGTGCATCAT+AGG + Chr6:21812008-21812027 None:intergenic 25.0%
! AAATAGTTCCAAGTTATCAA+AGG + Chr6:21813996-21814015 None:intergenic 25.0%
! AAATCATTGTATTCAATAGC+AGG + Chr6:21814712-21814731 None:intergenic 25.0%
! AAGCTTAAAAGTTGTTGAAA+AGG - Chr6:21813832-21813851 MsG0680031534.01.T01:intron 25.0%
! AATCTGTAAGATTGAGAAAA+AGG - Chr6:21811134-21811153 MsG0680031534.01.T01:intron 25.0%
! ACTCTTATTCATAGTAAAGT+AGG - Chr6:21815448-21815467 MsG0680031534.01.T01:intron 25.0%
! AGAAAAAATAGGTGAAATTG+AGG + Chr6:21814169-21814188 None:intergenic 25.0%
! AGCAAATTTCTCACAAAATT+CGG + Chr6:21814503-21814522 None:intergenic 25.0%
! ATAATTCCCTCATAAAATTG+TGG + Chr6:21814555-21814574 None:intergenic 25.0%
! ATAATTGAAGTTTGACCAAA+AGG + Chr6:21815622-21815641 None:intergenic 25.0%
! ATCAAGAATTATTACTCGAA+AGG + Chr6:21814230-21814249 None:intergenic 25.0%
! CAAAAATATACGTTCCTTAT+TGG + Chr6:21812178-21812197 None:intergenic 25.0%
! CAGTAGTAAAAAGAATTCTA+TGG - Chr6:21813580-21813599 MsG0680031534.01.T01:intron 25.0%
! CTTATAAACTTTATGTCTCA+TGG - Chr6:21812577-21812596 MsG0680031534.01.T01:intron 25.0%
! GAAATGTGAAATTATCCATA+TGG - Chr6:21813182-21813201 MsG0680031534.01.T01:intron 25.0%
! GAATCTTTCACAGAAAAAAT+AGG + Chr6:21814180-21814199 None:intergenic 25.0%
! GGAAATAAGGTATACATATT+TGG - Chr6:21811811-21811830 MsG0680031534.01.T01:intron 25.0%
! GTTAAAAAACTGAAGAAGAA+TGG + Chr6:21811569-21811588 None:intergenic 25.0%
! TAAAGAACATGTTATCCAAA+GGG + Chr6:21815518-21815537 None:intergenic 25.0%
! TAAAGAACATGTTATGCAAA+GGG + Chr6:21815249-21815268 None:intergenic 25.0%
! TAATTATTCTCAAGGAGAAA+TGG - Chr6:21811622-21811641 MsG0680031534.01.T01:intron 25.0%
! TAGTAAAAAGAATTCTATGG+CGG - Chr6:21813583-21813602 MsG0680031534.01.T01:intron 25.0%
! TATGAAATATAAATGGTGCA+TGG - Chr6:21811409-21811428 MsG0680031534.01.T01:intron 25.0%
! TATTGAAAATCTTGACACAA+TGG + Chr6:21814650-21814669 None:intergenic 25.0%
! TCAAGAATTATTACTCGAAA+GGG + Chr6:21814229-21814248 None:intergenic 25.0%
! TCCAAAATAGAACATATAGT+CGG + Chr6:21814772-21814791 None:intergenic 25.0%
! TGCATATGTGTAAATCATAA+AGG + Chr6:21812627-21812646 None:intergenic 25.0%
! TTAAGTTTAGAAATTCTTGC+AGG - Chr6:21815960-21815979 MsG0680031534.01.T01:CDS 25.0%
!! ACAAGTATTTAGTTTACACT+TGG - Chr6:21813437-21813456 MsG0680031534.01.T01:intron 25.0%
!! ATAATTGTCCTTTTATGGTT+TGG - Chr6:21811287-21811306 MsG0680031534.01.T01:intron 25.0%
!! ATAGGTATTTTTCTAACCAA+AGG - Chr6:21814038-21814057 MsG0680031534.01.T01:intron 25.0%
!! ATGTTCATGTTTTACAAATC+AGG - Chr6:21815276-21815295 MsG0680031534.01.T01:intron 25.0%
!! CTCAATATTAACCAAAGTTT+TGG + Chr6:21811233-21811252 None:intergenic 25.0%
!! GATAACTTGGAACTATTTTA+AGG - Chr6:21813998-21814017 MsG0680031534.01.T01:intron 25.0%
!! GATTTTTACAAAGTGCAATT+TGG - Chr6:21810731-21810750 MsG0680031534.01.T01:CDS 25.0%
!! GTTAGGTTTAGGTTTAAATT+AGG + Chr6:21812744-21812763 None:intergenic 25.0%
!! GTTCAATAATTGTCCTTTTA+TGG - Chr6:21811282-21811301 MsG0680031534.01.T01:intron 25.0%
!! GTTGATTTCAAACATTTGAT+AGG - Chr6:21814020-21814039 MsG0680031534.01.T01:intron 25.0%
!! TATTTGAAGTCAAAACTTTG+AGG - Chr6:21815484-21815503 MsG0680031534.01.T01:intron 25.0%
!! TGCAACAATTATTTTCAGAT+AGG + Chr6:21813495-21813514 None:intergenic 25.0%
!! TGTTCATGTTTTACAAATCA+GGG - Chr6:21815277-21815296 MsG0680031534.01.T01:intron 25.0%
!! TTAATAATTTGTGTAACGGA+TGG + Chr6:21812218-21812237 None:intergenic 25.0%
!! TTCAACAACTTTTAAGCTTT+TGG + Chr6:21813831-21813850 None:intergenic 25.0%
!!! ACAACTAATTGTTTTATGCT+AGG - Chr6:21813340-21813359 MsG0680031534.01.T01:intron 25.0%
!!! AGGTTTTAATTTTATGCAGT+TGG - Chr6:21815980-21815999 MsG0680031534.01.T01:CDS 25.0%
!!! AGGTTTTGTAATTAAGCTTT+AGG + Chr6:21812724-21812743 None:intergenic 25.0%
!!! ATTTTGTGAGAAATTTGCTA+TGG - Chr6:21814504-21814523 MsG0680031534.01.T01:intron 25.0%
!!! GCAACTGTTTTAATTTTTTC+AGG - Chr6:21816025-21816044 MsG0680031534.01.T01:CDS 25.0%
!!! GTATTTCTTATTTTACAGGT+AGG - Chr6:21813751-21813770 MsG0680031534.01.T01:CDS 25.0%
!!! TAATAATTTGTGTAACGGAT+GGG + Chr6:21812217-21812236 None:intergenic 25.0%
!!! TTTCATCATTTTAGTGACAA+TGG - Chr6:21814729-21814748 MsG0680031534.01.T01:intron 25.0%
!!! TTTTGTGAGAAATTTGCTAT+GGG - Chr6:21814505-21814524 MsG0680031534.01.T01:intron 25.0%
!!! TTTTTTTTTTCAGCACATCA+TGG - Chr6:21813541-21813560 MsG0680031534.01.T01:intron 25.0%
AAACAGGAAATTTAATCCCT+AGG + Chr6:21812692-21812711 None:intergenic 30.0%
ACCATTAATTGTCTAGAGAA+AGG + Chr6:21815381-21815400 None:intergenic 30.0%
AGGAATCTTTCACAAAATTG+AGG + Chr6:21814202-21814221 None:intergenic 30.0%
ATAATTGAAGTTCGACCAAA+AGG + Chr6:21815352-21815371 None:intergenic 30.0%
ATGACTCATATTGTAACAGA+TGG - Chr6:21815769-21815788 MsG0680031534.01.T01:intron 30.0%
CAACAAAATTCAAAACAGAC+AGG + Chr6:21811188-21811207 None:intergenic 30.0%
CAAGAATTATTACTCGAAAG+GGG + Chr6:21814228-21814247 None:intergenic 30.0%
CAATACAATGGTTAACCTTA+CGG - Chr6:21810945-21810964 MsG0680031534.01.T01:intron 30.0%
CAGAAAAGGAAAAATACCTT+TGG + Chr6:21814057-21814076 None:intergenic 30.0%
CAGGGAATTTACTTGATAAA+GGG - Chr6:21810692-21810711 MsG0680031534.01.T01:CDS 30.0%
CATGAATGTCAAAATTCTGA+AGG + Chr6:21813656-21813675 None:intergenic 30.0%
CCATTAATTGTCTAGAGAAA+GGG + Chr6:21815380-21815399 None:intergenic 30.0%
GAAAGAGAGGAAAAATTGTT+AGG + Chr6:21812761-21812780 None:intergenic 30.0%
GAAATTTAATCCCTAGGTTT+AGG + Chr6:21812686-21812705 None:intergenic 30.0%
GAGGAAAAATTGTTAGGTTT+AGG + Chr6:21812755-21812774 None:intergenic 30.0%
GAGGGAATTATACTTTCTTT+AGG - Chr6:21814564-21814583 MsG0680031534.01.T01:intron 30.0%
GATATTACTCTACACTGATA+TGG - Chr6:21813365-21813384 MsG0680031534.01.T01:intron 30.0%
GATCAATCAATATGCAATTC+TGG - Chr6:21810622-21810641 MsG0680031534.01.T01:CDS 30.0%
GCTATGTAATTTACAGCTTT+AGG - Chr6:21815809-21815828 MsG0680031534.01.T01:intron 30.0%
GTAAAGAACATGTTATCCAA+AGG + Chr6:21815519-21815538 None:intergenic 30.0%
GTAAAGAACATGTTATGCAA+AGG + Chr6:21815250-21815269 None:intergenic 30.0%
TAAACCTAAGCAAGAAGAAA+CGG + Chr6:21812969-21812988 None:intergenic 30.0%
TAAACTTCAGATATGACACA+TGG - Chr6:21813797-21813816 MsG0680031534.01.T01:intron 30.0%
TCAGATTTGACTATTCATGT+TGG - Chr6:21813948-21813967 MsG0680031534.01.T01:intron 30.0%
TCTATAAGTGCAACTTCTAA+AGG + Chr6:21811469-21811488 None:intergenic 30.0%
TTACAGGTAGGTGTTTATTA+AGG - Chr6:21813763-21813782 MsG0680031534.01.T01:CDS 30.0%
TTGACTATTCATGTTGGATT+TGG - Chr6:21813954-21813973 MsG0680031534.01.T01:intron 30.0%
TTTCACAACCTGTAAATAAG+AGG + Chr6:21813166-21813185 None:intergenic 30.0%
! AACCAGCAAAATTGTTTTCT+TGG + Chr6:21810921-21810940 None:intergenic 30.0%
! ACCAGCAAAATTGTTTTCTT+GGG + Chr6:21810920-21810939 None:intergenic 30.0%
! ACCGACTATATGTTCTATTT+TGG - Chr6:21814768-21814787 MsG0680031534.01.T01:intron 30.0%
! ACGTTCCTTATTGGATTTTA+GGG + Chr6:21812169-21812188 None:intergenic 30.0%
! ATGATGTTTTCCCATGATTT+TGG - Chr6:21810593-21810612 MsG0680031534.01.T01:CDS 30.0%
! GAATTGCATATTGATTGATC+TGG + Chr6:21810622-21810641 None:intergenic 30.0%
! GATTTTCTTTGAATGGATCA+GGG - Chr6:21816131-21816150 MsG0680031534.01.T01:intron 30.0%
! TACGTTCCTTATTGGATTTT+AGG + Chr6:21812170-21812189 None:intergenic 30.0%
! TGATTTTCTTTGAATGGATC+AGG - Chr6:21816130-21816149 MsG0680031534.01.T01:intron 30.0%
! TGGTTTATCCTTTGATAACT+TGG - Chr6:21813985-21814004 MsG0680031534.01.T01:intron 30.0%
!! ACCTCAAATCGATTTTGTTT+TGG + Chr6:21810653-21810672 None:intergenic 30.0%
!! AGCTCGACTAAATTTGTTTT+TGG + Chr6:21811948-21811967 None:intergenic 30.0%
!! CCTCAAATTTTCAAGCATTT+GGG + Chr6:21815688-21815707 None:intergenic 30.0%
!! CTTCAGAATTTTGACATTCA+TGG - Chr6:21813654-21813673 MsG0680031534.01.T01:intron 30.0%
!! GTGTTTTTCCTCTTATTTAC+AGG - Chr6:21813155-21813174 MsG0680031534.01.T01:intron 30.0%
!! TCCTCAAATTTTCAAGCATT+TGG + Chr6:21815689-21815708 None:intergenic 30.0%
!! TCTTTAAGTCATGTTGACTT+AGG - Chr6:21814795-21814814 MsG0680031534.01.T01:intron 30.0%
!! TGTAATTAAGCTTTAGGTCA+GGG + Chr6:21812718-21812737 None:intergenic 30.0%
!! TTGTAATTAAGCTTTAGGTC+AGG + Chr6:21812719-21812738 None:intergenic 30.0%
!!! AACTGTGATTTTGATTACCA+TGG - Chr6:21815163-21815182 MsG0680031534.01.T01:intron 30.0%
!!! ACTAGTTTTAACCTAAACCT+AGG - Chr6:21812672-21812691 MsG0680031534.01.T01:intron 30.0%
!!! AGTGTTAGTAATGTTTTGAC+AGG - Chr6:21814529-21814548 MsG0680031534.01.T01:intron 30.0%
!!! ATTTTAGGGCATTGTTTGTA+GGG + Chr6:21812155-21812174 None:intergenic 30.0%
!!! CCTCAAATCGATTTTGTTTT+GGG + Chr6:21810652-21810671 None:intergenic 30.0%
!!! CTAGTTTTAACCTAAACCTA+GGG - Chr6:21812673-21812692 MsG0680031534.01.T01:intron 30.0%
!!! GATTTTGATTACCATGGAAT+TGG - Chr6:21815169-21815188 MsG0680031534.01.T01:intron 30.0%
!!! TGAAGCTTCTATACTTTTTC+AGG - Chr6:21813215-21813234 MsG0680031534.01.T01:intron 30.0%
AAAAAAATAAGGTGAGACGG+TGG + Chr6:21813526-21813545 None:intergenic 35.0%
AACTTCTTGCCTATTTGCTT+TGG + Chr6:21812085-21812104 None:intergenic 35.0%
AAGTTTAATCCCACTCAATG+TGG + Chr6:21815928-21815947 None:intergenic 35.0%
ACATGTTATCCAAAGGGAAT+AGG + Chr6:21815512-21815531 None:intergenic 35.0%
ACTTCTTGCCTATTTGCTTT+GGG + Chr6:21812084-21812103 None:intergenic 35.0%
AGAAAGTTGGAAAAGGTGAT+AGG - Chr6:21816200-21816219 MsG0680031534.01.T01:intron 35.0%
AGTAAAGTAGGAAATTCTGC+AGG - Chr6:21815460-21815479 MsG0680031534.01.T01:intron 35.0%
CAACGCAAAGCTTATCATTT+GGG - Chr6:21811974-21811993 MsG0680031534.01.T01:intron 35.0%
CAATGCCCTAAAATCCAATA+AGG - Chr6:21812161-21812180 MsG0680031534.01.T01:intron 35.0%
CCAGGGAATTTACTTGATAA+AGG - Chr6:21810691-21810710 MsG0680031534.01.T01:CDS 35.0%
CCCAAATGCTTGAAAATTTG+AGG - Chr6:21815685-21815704 MsG0680031534.01.T01:intron 35.0%
CCCTTTCTCTAGACAATTAA+TGG - Chr6:21815377-21815396 MsG0680031534.01.T01:intron 35.0%
CCTCAAAGTTTCAAGCATTT+GGG + Chr6:21815427-21815446 None:intergenic 35.0%
CCTTTATCAAGTAAATTCCC+TGG + Chr6:21810694-21810713 None:intergenic 35.0%
CGATGACAAGGATAAAGAAA+TGG - Chr6:21810993-21811012 MsG0680031534.01.T01:intron 35.0%
CGTAAGGTTAACCATTGTAT+TGG + Chr6:21810947-21810966 None:intergenic 35.0%
CTTCAAACTTGACTTCCATA+TGG + Chr6:21813200-21813219 None:intergenic 35.0%
CTTTAAGTCATGTTCTGCTT+TGG - Chr6:21814824-21814843 MsG0680031534.01.T01:intron 35.0%
GCAAGAAGTTGTTAACAAAC+CGG - Chr6:21812095-21812114 MsG0680031534.01.T01:intron 35.0%
GTGCTCTATATCGAGTTTAA+TGG - Chr6:21813400-21813419 MsG0680031534.01.T01:CDS 35.0%
TACATCGACCAAACCATAAA+AGG + Chr6:21811298-21811317 None:intergenic 35.0%
TAGTCATTGCAAAGCATACA+CGG + Chr6:21812319-21812338 None:intergenic 35.0%
TATCATAGAGACTGGATCTA+CGG + Chr6:21816327-21816346 None:intergenic 35.0%
TATGTGAGTAGATTGAACTC+TGG - Chr6:21813882-21813901 MsG0680031534.01.T01:intron 35.0%
TCAACGCAAAGCTTATCATT+TGG - Chr6:21811973-21811992 MsG0680031534.01.T01:intron 35.0%
TCCTCAAAGTTTCAAGCATT+TGG + Chr6:21815428-21815447 None:intergenic 35.0%
TGGGTTACAATCGTGTTTAT+GGG - Chr6:21810758-21810777 MsG0680031534.01.T01:CDS 35.0%
TTGATGCGACATCATAACAA+AGG - Chr6:21812056-21812075 MsG0680031534.01.T01:intron 35.0%
TTGGGTTACAATCGTGTTTA+TGG - Chr6:21810757-21810776 MsG0680031534.01.T01:CDS 35.0%
! ACCCAAGAAAACAATTTTGC+TGG - Chr6:21810916-21810935 MsG0680031534.01.T01:intron 35.0%
! ATAAGTGCAACTTCTAAAGG+AGG + Chr6:21811466-21811485 None:intergenic 35.0%
! CTTTCACTCATGTTCTGTTT+TGG - Chr6:21814852-21814871 MsG0680031534.01.T01:intron 35.0%
! TATGCAATTTTTATGCCGCA+CGG - Chr6:21812641-21812660 MsG0680031534.01.T01:intron 35.0%
! TATTTTCAGATAGGCATCTG+CGG + Chr6:21813486-21813505 None:intergenic 35.0%
! TGTTGGATTTGGAATGTGAT+TGG - Chr6:21813965-21813984 MsG0680031534.01.T01:intron 35.0%
!! ACAAAGTGCAATTTGGTTCT+TGG - Chr6:21810738-21810757 MsG0680031534.01.T01:CDS 35.0%
!! CAAAGTGCAATTTGGTTCTT+GGG - Chr6:21810739-21810758 MsG0680031534.01.T01:CDS 35.0%
!! CCCAAAACAAAATCGATTTG+AGG - Chr6:21810649-21810668 MsG0680031534.01.T01:CDS 35.0%
!! GAATTTTGACATTCATGGTG+AGG - Chr6:21813659-21813678 MsG0680031534.01.T01:intron 35.0%
!! GTCTGCTGAAAAAGTTTTGA+TGG - Chr6:21811050-21811069 MsG0680031534.01.T01:intron 35.0%
!! TGAGCTACTGCTTATTTTTC+AGG - Chr6:21814090-21814109 MsG0680031534.01.T01:intron 35.0%
!!! CTTCTATACTTTTTCAGGTG+AGG - Chr6:21813220-21813239 MsG0680031534.01.T01:intron 35.0%
!!! GATTTTAGGGCATTGTTTGT+AGG + Chr6:21812156-21812175 None:intergenic 35.0%
AACGGAATTCTTGTGTCAGA+TGG + Chr6:21812269-21812288 None:intergenic 40.0%
AATTGGCATTCTACAACTGC+CGG - Chr6:21815186-21815205 MsG0680031534.01.T01:intron 40.0%
ACAACTGCTCTTAGTTCATC+GGG + Chr6:21813633-21813652 None:intergenic 40.0%
AGAAGTTGTTAACAAACCGG+AGG - Chr6:21812098-21812117 MsG0680031534.01.T01:intron 40.0%
AGTGGTGATATCATAGAGAC+TGG + Chr6:21816335-21816354 None:intergenic 40.0%
ATTGCAAAGCATACACGGAT+GGG + Chr6:21812314-21812333 None:intergenic 40.0%
CAATCTACTCACATACACAG+TGG + Chr6:21813877-21813896 None:intergenic 40.0%
CCCAAATGCTTGAAACTTTG+AGG - Chr6:21815424-21815443 MsG0680031534.01.T01:intron 40.0%
CTAAGCAAGAAGAAACGGTT+GGG + Chr6:21812964-21812983 None:intergenic 40.0%
CTATGATATCACCACTGACA+CGG - Chr6:21816339-21816358 MsG0680031534.01.T01:CDS 40.0%
CTTTAGGTCAGGGTTAAAAC+AGG + Chr6:21812708-21812727 None:intergenic 40.0%
GACAACTGCTCTTAGTTCAT+CGG + Chr6:21813634-21813653 None:intergenic 40.0%
GAGCACTCGTCAACTATAAT+TGG + Chr6:21811909-21811928 None:intergenic 40.0%
GATCTGGTCTCCAAAATCAT+GGG + Chr6:21810606-21810625 None:intergenic 40.0%
GCCATGAAAATGTGAAGAGA+GGG + Chr6:21814928-21814947 None:intergenic 40.0%
GGATTGCAGAAAGTTGGAAA+AGG - Chr6:21816193-21816212 MsG0680031534.01.T01:intron 40.0%
GTTGTAGAATGCCAATTCCA+TGG + Chr6:21815183-21815202 None:intergenic 40.0%
TAAGCAAGAAGAAACGGTTG+GGG + Chr6:21812963-21812982 None:intergenic 40.0%
TCATCAGCAGTCAATGTCAA+TGG + Chr6:21810789-21810808 None:intergenic 40.0%
TGATCTGGTCTCCAAAATCA+TGG + Chr6:21810607-21810626 None:intergenic 40.0%
TGCCATGAAAATGTGAAGAG+AGG + Chr6:21814929-21814948 None:intergenic 40.0%
TGTCATCGTTGTTAGTCACA+TGG + Chr6:21810981-21811000 None:intergenic 40.0%
TGTGACTAACAACGATGACA+AGG - Chr6:21810981-21811000 MsG0680031534.01.T01:intron 40.0%
TGTGTCGTCTGTTGGAAATA+AGG - Chr6:21811798-21811817 MsG0680031534.01.T01:intron 40.0%
TTATTACTCGAAAGGGGTTG+AGG + Chr6:21814222-21814241 None:intergenic 40.0%
TTGGTTGGATTGCAGAAAGT+TGG - Chr6:21816187-21816206 MsG0680031534.01.T01:intron 40.0%
TTGTATCACCACCATAATCC+TGG - Chr6:21812895-21812914 MsG0680031534.01.T01:intron 40.0%
TTGTTAACAAACCGGAGGAA+AGG - Chr6:21812103-21812122 MsG0680031534.01.T01:intron 40.0%
! AAACTTGCTCCACATTGAGT+GGG - Chr6:21815916-21815935 MsG0680031534.01.T01:intron 40.0%
! ATGCAATTTTTATGCCGCAC+GGG - Chr6:21812642-21812661 MsG0680031534.01.T01:intron 40.0%
! ATTGACATTGACTGCTGATG+AGG - Chr6:21810788-21810807 MsG0680031534.01.T01:CDS 40.0%
! CACTGACACGGTAATTTTTC+CGG - Chr6:21816351-21816370 MsG0680031534.01.T01:CDS 40.0%
! CTCCAACTTGTTTGAGAGAT+TGG + Chr6:21812358-21812377 None:intergenic 40.0%
! GACAGGCCACAATTTTATGA+GGG - Chr6:21814546-21814565 MsG0680031534.01.T01:intron 40.0%
! GGATTATGGTGGTGATACAA+CGG + Chr6:21812895-21812914 None:intergenic 40.0%
! GTTTGGTCGATGTAGACTTT+TGG - Chr6:21811304-21811323 MsG0680031534.01.T01:intron 40.0%
! TAAACTTGCTCCACATTGAG+TGG - Chr6:21815915-21815934 MsG0680031534.01.T01:intron 40.0%
! TCCCTCTCTTCACATTTTCA+TGG - Chr6:21814924-21814943 MsG0680031534.01.T01:intron 40.0%
! TGACAGGCCACAATTTTATG+AGG - Chr6:21814545-21814564 MsG0680031534.01.T01:intron 40.0%
!! AAATCGATTTGAGGTACTCG+TGG - Chr6:21810658-21810677 MsG0680031534.01.T01:CDS 40.0%
!! CAGAACACAGCTTTAAACAG+TGG + Chr6:21811680-21811699 None:intergenic 40.0%
!! GGAAGAGCACAAGATGTTTT+TGG - Chr6:21816168-21816187 MsG0680031534.01.T01:intron 40.0%
!! TGCTGGTTCATCCAATACAA+TGG - Chr6:21810933-21810952 MsG0680031534.01.T01:intron 40.0%
!!! GAGCACAAGATGTTTTTGGT+TGG - Chr6:21816172-21816191 MsG0680031534.01.T01:intron 40.0%
AATTCTATGGCGGCCGAAAA+TGG - Chr6:21813593-21813612 MsG0680031534.01.T01:intron 45.0%
ACTCGTGGAAAGGAATAACC+AGG - Chr6:21810673-21810692 MsG0680031534.01.T01:CDS 45.0%
AGTTGACCATGAGAGAACAC+TGG + Chr6:21812395-21812414 None:intergenic 45.0%
ATACTTCTGACAGACGACGA+CGG - Chr6:21812458-21812477 MsG0680031534.01.T01:intron 45.0%
CATTGCAAAGCATACACGGA+TGG + Chr6:21812315-21812334 None:intergenic 45.0%
CCAACCGTTTCTTCTTGCTT+AGG - Chr6:21812962-21812981 MsG0680031534.01.T01:intron 45.0%
CCTAAGCAAGAAGAAACGGT+TGG + Chr6:21812965-21812984 None:intergenic 45.0%
CGGAAAAATTACCGTGTCAG+TGG + Chr6:21816353-21816372 None:intergenic 45.0%
CTCGTGGAAAGGAATAACCA+GGG - Chr6:21810674-21810693 MsG0680031534.01.T01:CDS 45.0%
GACGGCGATTGAGATTACTT+TGG + Chr6:21816303-21816322 None:intergenic 45.0%
GCAGCAAGATTACTGGGAAA+AGG - Chr6:21811028-21811047 MsG0680031534.01.T01:intron 45.0%
GGCCAATCTCTCAAACAAGT+TGG - Chr6:21812353-21812372 MsG0680031534.01.T01:intron 45.0%
GGTTAACCTTACGGATGCTT+TGG - Chr6:21810954-21810973 MsG0680031534.01.T01:intron 45.0%
GTGATAGGAGAGGAATCTCA+AGG - Chr6:21816215-21816234 MsG0680031534.01.T01:intron 45.0%
GTTGGAAAAGGTGATAGGAG+AGG - Chr6:21816205-21816224 MsG0680031534.01.T01:intron 45.0%
TAAGGCAATGTGTCGTCTGT+TGG - Chr6:21811790-21811809 MsG0680031534.01.T01:intron 45.0%
TAGGGATAGGCTCATAGACT+AGG - Chr6:21815209-21815228 MsG0680031534.01.T01:intron 45.0%
TATCACCACCATAATCCTGG+CGG - Chr6:21812898-21812917 MsG0680031534.01.T01:intron 45.0%
TCACAACCAGTGTTCTCTCA+TGG - Chr6:21812386-21812405 MsG0680031534.01.T01:intron 45.0%
TCAGCAGTCAATGTCAATGG+CGG + Chr6:21810786-21810805 None:intergenic 45.0%
TCCCAGTAATCTTGCTGCAT+GGG + Chr6:21811026-21811045 None:intergenic 45.0%
TGAATGGATCAGGGATTCTG+TGG - Chr6:21816140-21816159 MsG0680031534.01.T01:intron 45.0%
TTCCCAGTAATCTTGCTGCA+TGG + Chr6:21811027-21811046 None:intergenic 45.0%
TTTGAGGAGCCTATTCCCTT+TGG - Chr6:21815500-21815519 MsG0680031534.01.T01:intron 45.0%
! GATTTGAGGTACTCGTGGAA+AGG - Chr6:21810663-21810682 MsG0680031534.01.T01:CDS 45.0%
! TCCGTCGGTGATACCATTTT+CGG + Chr6:21813609-21813628 None:intergenic 45.0%
!! CAAAGGCACCCAAAGCAAAT+AGG - Chr6:21812073-21812092 MsG0680031534.01.T01:intron 45.0%
!!! ATATAATAAACATTAAATTT+TGG + Chr6:21814440-21814459 None:intergenic 5.0%
!!! ATTTAGTTTTATAAAAAAAA+CGG + Chr6:21815002-21815021 None:intergenic 5.0%
!!! TAAATTTTAAATCATATATA+TGG - Chr6:21815041-21815060 MsG0680031534.01.T01:intron 5.0%
AACCGGAGGAAAGGAGAATG+AGG - Chr6:21812112-21812131 MsG0680031534.01.T01:intron 50.0%
ACCCCATGCAGCAAGATTAC+TGG - Chr6:21811021-21811040 MsG0680031534.01.T01:intron 50.0%
ACCGGAGGAAAGGAGAATGA+GGG - Chr6:21812113-21812132 MsG0680031534.01.T01:intron 50.0%
AGAAATCCCGCAGCTGTTGT+GGG - Chr6:21815890-21815909 MsG0680031534.01.T01:intron 50.0%
CAAGAAGAAACGGTTGGGGT+TGG + Chr6:21812959-21812978 None:intergenic 50.0%
CCCAGTAATCTTGCTGCATG+GGG + Chr6:21811025-21811044 None:intergenic 50.0%
CCCCATGCAGCAAGATTACT+GGG - Chr6:21811022-21811041 MsG0680031534.01.T01:intron 50.0%
CTATTTCGCGCGTGACTTCT+AGG - Chr6:21812423-21812442 MsG0680031534.01.T01:intron 50.0%
CTCCAACATCAGCAGAGAGA+GGG + Chr6:21811084-21811103 None:intergenic 50.0%
GAAAACAAGAACGCCTACGC+AGG - Chr6:21816246-21816265 MsG0680031534.01.T01:intron 50.0%
GAAACGCGTGAGAGAAAGAG+AGG + Chr6:21812774-21812793 None:intergenic 50.0%
GCATTCTACAACTGCCGGTA+GGG - Chr6:21815191-21815210 MsG0680031534.01.T01:intron 50.0%
GCCGAAAATGGTATCACCGA+CGG - Chr6:21813605-21813624 MsG0680031534.01.T01:intron 50.0%
GGGAAAGCTCTCGATTACTG+TGG + Chr6:21814908-21814927 None:intergenic 50.0%
GTCTATGAGCCTATCCCTAC+CGG + Chr6:21815208-21815227 None:intergenic 50.0%
GTGATACAACGGAGCCTTGA+TGG + Chr6:21812884-21812903 None:intergenic 50.0%
GTTGACGAGTGCTCTACTTG+CGG - Chr6:21811915-21811934 MsG0680031534.01.T01:intron 50.0%
GTTTAGTCCCACAACAGCTG+CGG + Chr6:21815900-21815919 None:intergenic 50.0%
TACTTCTGACAGACGACGAC+GGG - Chr6:21812459-21812478 MsG0680031534.01.T01:intron 50.0%
TAGAAATCCCGCAGCTGTTG+TGG - Chr6:21815889-21815908 MsG0680031534.01.T01:intron 50.0%
TCCAACATCAGCAGAGAGAG+GGG + Chr6:21811083-21811102 None:intergenic 50.0%
TCCCTCATTCTCCTTTCCTC+CGG + Chr6:21812117-21812136 None:intergenic 50.0%
TCTCCAACATCAGCAGAGAG+AGG + Chr6:21811085-21811104 None:intergenic 50.0%
TGGATCAGGGATTCTGTGGA+CGG - Chr6:21816144-21816163 MsG0680031534.01.T01:intron 50.0%
TTTAGTCCCACAACAGCTGC+GGG + Chr6:21815899-21815918 None:intergenic 50.0%
! CATGGTCCAAAGCATCCGTA+AGG + Chr6:21810963-21810982 None:intergenic 50.0%
!! AACGGAGCCTTGATGGATTC+TGG + Chr6:21812877-21812896 None:intergenic 50.0%
!! CTTGATGGATTCTGGTGGGA+GGG + Chr6:21812869-21812888 None:intergenic 50.0%
!! GAGCCTTGATGGATTCTGGT+GGG + Chr6:21812873-21812892 None:intergenic 50.0%
!! TTGATGGATTCTGGTGGGAG+GGG + Chr6:21812868-21812887 None:intergenic 50.0%
AACTAGTCCTTGCACCCGTG+CGG + Chr6:21812659-21812678 None:intergenic 55.0%
AACTATGGCCTATCCGCAGC+CGG - Chr6:21812925-21812944 MsG0680031534.01.T01:intron 55.0%
AATCCTGGCGGCACCAACTA+TGG - Chr6:21812910-21812929 MsG0680031534.01.T01:intron 55.0%
ACTTCTGACAGACGACGACG+GGG - Chr6:21812460-21812479 MsG0680031534.01.T01:intron 55.0%
AGAGACTGGATCTACGGCGA+CGG + Chr6:21816321-21816340 None:intergenic 55.0%
ATCAGGGATTCTGTGGACGG+AGG - Chr6:21816147-21816166 MsG0680031534.01.T01:intron 55.0%
ATCGCAGCACTGCTCATACC+TGG - Chr6:21811852-21811871 MsG0680031534.01.T01:intron 55.0%
CCAACATCAGCAGAGAGAGG+GGG + Chr6:21811082-21811101 None:intergenic 55.0%
CCTCCCACCAGAATCCATCA+AGG - Chr6:21812867-21812886 MsG0680031534.01.T01:intron 55.0%
CTACAACTGCCGGTAGGGAT+AGG - Chr6:21815196-21815215 MsG0680031534.01.T01:intron 55.0%
CTTAGTTCATCGGGCTCCGT+CGG + Chr6:21813624-21813643 None:intergenic 55.0%
GGCATTCTACAACTGCCGGT+AGG - Chr6:21815190-21815209 MsG0680031534.01.T01:intron 55.0%
GGGGAAGGACTGCTCATTCA+AGG - Chr6:21811874-21811893 MsG0680031534.01.T01:intron 55.0%
GTTGGGGTTGGAATCAGCAC+CGG + Chr6:21812947-21812966 None:intergenic 55.0%
TCGCAGCACTGCTCATACCT+GGG - Chr6:21811853-21811872 MsG0680031534.01.T01:intron 55.0%
! GCATGACTTGCAACCTGCGT+AGG + Chr6:21816262-21816281 None:intergenic 55.0%
! TTTTATGCCGCACGGGTGCA+AGG - Chr6:21812649-21812668 MsG0680031534.01.T01:intron 55.0%
!! AGTTGGTGCCGCCAGGATTA+TGG + Chr6:21812909-21812928 None:intergenic 55.0%
!! CCTTGATGGATTCTGGTGGG+AGG + Chr6:21812870-21812889 None:intergenic 55.0%
!! GGAGCCTTGATGGATTCTGG+TGG + Chr6:21812874-21812893 None:intergenic 55.0%
ATTCTGGTGGGAGGGGTCGA+TGG + Chr6:21812861-21812880 None:intergenic 60.0%
CACTGCTCATACCTGGGGGA+AGG - Chr6:21811859-21811878 MsG0680031534.01.T01:intron 60.0%
CCCCCTCTCTCTGCTGATGT+TGG - Chr6:21811079-21811098 MsG0680031534.01.T01:intron 60.0%
CGCAGCACTGCTCATACCTG+GGG - Chr6:21811854-21811873 MsG0680031534.01.T01:intron 60.0%
GAATGAGCAGTCCTTCCCCC+AGG + Chr6:21811873-21811892 None:intergenic 60.0%
GCAGCACTGCTCATACCTGG+GGG - Chr6:21811855-21811874 MsG0680031534.01.T01:intron 60.0%
GGCTGCGGATAGGCCATAGT+TGG + Chr6:21812926-21812945 None:intergenic 60.0%
! CGCGCGTGACTTCTAGGAGT+GGG - Chr6:21812429-21812448 MsG0680031534.01.T01:intron 60.0%
! TCGCGCGTGACTTCTAGGAG+TGG - Chr6:21812428-21812447 MsG0680031534.01.T01:intron 60.0%
!! AATCAGCACCGGCTGCGGAT+AGG + Chr6:21812936-21812955 None:intergenic 60.0%
!! GGTCGATGGTGGCATTGGCA+TGG + Chr6:21812847-21812866 None:intergenic 60.0%
!! GTTGGAATCAGCACCGGCTG+CGG + Chr6:21812941-21812960 None:intergenic 60.0%
!! TGGTGCCGCCAGGATTATGG+TGG + Chr6:21812906-21812925 None:intergenic 60.0%
! GGAGGGGTCGATGGTGGCAT+TGG + Chr6:21812852-21812871 None:intergenic 65.0%
!! AGGCCATAGTTGGTGCCGCC+AGG + Chr6:21812916-21812935 None:intergenic 65.0%
CTGGTGGGAGGGGTCGATGG+TGG + Chr6:21812858-21812877 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 21810593 21816387 21810593 ID=MsG0680031534.01;Name=MsG0680031534.01
Chr6 mRNA 21810593 21816387 21810593 ID=MsG0680031534.01.T01;Parent=MsG0680031534.01;Name=MsG0680031534.01.T01;_AED=0.68;_eAED=0.68;_QI=0|0|0|0.2|0.75|0.8|5|0|193
Chr6 exon 21816310 21816387 21816310 ID=MsG0680031534.01.T01:exon:13764;Parent=MsG0680031534.01.T01
Chr6 exon 21815918 21816064 21815918 ID=MsG0680031534.01.T01:exon:13763;Parent=MsG0680031534.01.T01
Chr6 exon 21813744 21813803 21813744 ID=MsG0680031534.01.T01:exon:13762;Parent=MsG0680031534.01.T01
Chr6 exon 21813366 21813426 21813366 ID=MsG0680031534.01.T01:exon:13761;Parent=MsG0680031534.01.T01
Chr6 exon 21810593 21810828 21810593 ID=MsG0680031534.01.T01:exon:13760;Parent=MsG0680031534.01.T01
Chr6 CDS 21816310 21816387 21816310 ID=MsG0680031534.01.T01:cds;Parent=MsG0680031534.01.T01
Chr6 CDS 21815918 21816064 21815918 ID=MsG0680031534.01.T01:cds;Parent=MsG0680031534.01.T01
Chr6 CDS 21813744 21813803 21813744 ID=MsG0680031534.01.T01:cds;Parent=MsG0680031534.01.T01
Chr6 CDS 21813366 21813426 21813366 ID=MsG0680031534.01.T01:cds;Parent=MsG0680031534.01.T01
Chr6 CDS 21810593 21810828 21810593 ID=MsG0680031534.01.T01:cds;Parent=MsG0680031534.01.T01
Gene Sequence

>MsG0680031534.01.T01

ATGATGTTTTCCCATGATTTTGGAGACCAGATCAATCAATATGCAATTCTGGTAGACCCAAAACAAAATCGATTTGAGACCCAAGAAAACAATTTTGCTGGTTCATCCAATACAATGGTTAACCTTACGGATGCTTTGGACCATGTGACTAACAACGATGACAAGGATAAAGAAATGGATACTACCCCATGCAGCAAGATTACTGGGAAAAGGTCTGCTGAAAAAGTTGTGAAATGTGAAATTATCCATATGGAAGTCAAGTTTGAAGCTTCTATACTTTTTCAGCACATCATGGAAGAAGAACAAGAGCACAGTAGTAAAAAGAATTCTATGGCGGCCGAAAATGGGATTCTGTGGACGGAGGAAGAGCACAAGATGTTTTTGGTTGGATTGCAGAAAGTTGGAAAAGGTGATAGGAGAGGAATCTCAAGGAACTATGTGAAAACAAGAACGCCTACGCAGGTTGCAAGTCATGCTCAGAAGTACTCTCTGAACCAAAGTAATCTCAATCGCCGTCGCCGTAGATCCAGTCTCTATGATATCACCACTGACACGGTAATTTTTCCGGCAATCTCTTTGTAG
Protein sequence

>MsG0680031534.01.T01

MMFSHDFGDQINQYAILVDPKQNRFETQENNFAGSSNTMVNLTDALDHVTNNDDKDKEMDTTPCSKITGKRSAEKVVKCEIIHMEVKFEASILFQHIMEEEQEHSSKKNSMAAENGILWTEEEHKMFLVGLQKVGKGDRRGISRNYVKTRTPTQVASHAQKYSLNQSNLNRRRRRSSLYDITTDTVIFPAISL*