AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680032457.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032457.01.T01 MTR_8g019520 61.290 62 20 1 13 74 199 256 2.74e-18 81.6
MsG0680032457.01.T01 MTR_8g019520 61.290 62 20 1 13 74 198 255 2.84e-18 81.6
MsG0680032457.01.T01 MTR_2g099500 58.065 62 22 1 13 74 193 250 3.89e-17 78.2
MsG0680032457.01.T01 MTR_1g015185 72.727 44 12 0 17 60 210 253 3.53e-16 75.9
MsG0680032457.01.T01 MTR_4g134510 66.667 45 15 0 16 60 201 245 5.54e-16 75.1
MsG0680032457.01.T01 MTR_4g015830 65.909 44 15 0 17 60 187 230 1.22e-14 71.2
MsG0680032457.01.T01 MTR_7g068590 65.909 44 15 0 17 60 189 232 1.52e-14 70.9
MsG0680032457.01.T01 MTR_2g040990 63.265 49 16 1 14 60 195 243 5.56e-14 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680032457.01.T01 AT5G20510 66.667 48 16 0 13 60 162 209 7.89e-17 77.0
MsG0680032457.01.T01 AT5G20510 66.667 48 16 0 13 60 203 250 1.39e-16 77.0
MsG0680032457.01.T01 AT3G42790 66.667 48 16 0 13 60 193 240 4.63e-16 75.5
MsG0680032457.01.T01 AT5G26210 72.727 44 12 0 17 60 202 245 5.96e-16 75.1
MsG0680032457.01.T01 AT1G14510 58.621 58 20 1 17 74 198 251 1.55e-15 73.9
MsG0680032457.01.T01 AT5G05610 57.895 57 20 1 13 69 184 236 1.99e-15 73.6
MsG0680032457.01.T01 AT5G05610 57.895 57 20 1 13 69 184 236 1.99e-15 73.6
MsG0680032457.01.T01 AT2G02470 68.182 44 14 0 17 60 203 246 3.76e-15 72.8
MsG0680032457.01.T01 AT2G02470 68.182 44 14 0 17 60 194 237 5.09e-15 72.4
MsG0680032457.01.T01 AT3G11200 58.333 48 20 0 13 60 176 223 1.33e-13 68.2
MsG0680032457.01.T01 AT3G11200 58.333 48 20 0 13 60 189 236 1.35e-13 68.6

Find 62 sgRNAs with CRISPR-Local

Find 434 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCCATGTTCTTGAGATTC+TGG 0.093284 6:+41747773 None:intergenic
TCCTTTGATTTCTTGATTCT+TGG 0.184945 6:+41747901 None:intergenic
AACCTGTTAGGGACGGGGTT+GGG 0.240765 6:-41750913 MsG0680032457.01.T01:CDS
CAGAAAATACAGAATTTATC+AGG 0.273550 6:+41753683 None:intergenic
ATCCATGTTCTTGAGATTCT+GGG 0.296780 6:+41747774 None:intergenic
CAGGGATACCCGAACCTGTT+AGG 0.335746 6:-41750925 MsG0680032457.01.T01:CDS
ATCTCTAACAGATGCATTGA+TGG 0.355592 6:-41752023 MsG0680032457.01.T01:intron
ACCTGTTAGGGACGGGGTTG+GGG 0.363331 6:-41750912 MsG0680032457.01.T01:CDS
ACCCCAACCCCGTCCCTAAC+AGG 0.381501 6:+41750911 None:intergenic
ACCCCGTCCCTAACAGGTTC+GGG 0.390549 6:+41750917 None:intergenic
AACCCCGTCCCTAACAGGTT+CGG 0.400967 6:+41750916 None:intergenic
GTCATCAGGCCCGGCCTTGA+GGG 0.404599 6:-41749211 MsG0680032457.01.T01:CDS
AGCATGCCCACCCTCAAGGC+CGG 0.421261 6:+41749201 None:intergenic
CTTGGTTACATCGGAGTTGT+GGG 0.425879 6:-41751941 MsG0680032457.01.T01:CDS
TGTGCAGTCGTCATCAGGCC+CGG 0.431956 6:-41749220 MsG0680032457.01.T01:intron
CGTCATCAGGCCCGGCCTTG+AGG 0.437701 6:-41749212 MsG0680032457.01.T01:CDS
GGGTCAGAACTTCCGTCTGT+GGG 0.441998 6:-41749401 MsG0680032457.01.T01:CDS
CTCTTTGCGATCTCTATGCT+TGG 0.445953 6:+41751971 None:intergenic
GGCATGCTGCTCAACCAAGC+CGG 0.452061 6:-41749186 MsG0680032457.01.T01:CDS
AGTTGTGGGATTGATAAAGT+TGG 0.452707 6:-41751927 MsG0680032457.01.T01:CDS
GCATGCTGCTCAACCAAGCC+GGG 0.454608 6:-41749185 MsG0680032457.01.T01:CDS
ATCAGGCCCGGCCTTGAGGG+TGG 0.457469 6:-41749208 MsG0680032457.01.T01:CDS
GCATGCCCACCCTCAAGGCC+GGG 0.459648 6:+41749202 None:intergenic
TCTTGGTTACATCGGAGTTG+TGG 0.474922 6:-41751942 MsG0680032457.01.T01:CDS
AACCAAGCCGGGCCTGCAAA+AGG 0.477053 6:-41749174 MsG0680032457.01.T01:intron
TCGATATGCTTAGCCCGAGC+AGG 0.478185 6:+41753614 None:intergenic
TACCCGAACCTGTTAGGGAC+GGG 0.488978 6:-41750919 MsG0680032457.01.T01:CDS
TGGGTCAGAACTTCCGTCTG+TGG 0.490280 6:-41749402 MsG0680032457.01.T01:CDS
TGTGAATATCACCCCTGCTC+GGG 0.497656 6:-41753627 MsG0680032457.01.T01:CDS
CTTCGTGATGTAACTAATGT+TGG 0.500861 6:-41749344 MsG0680032457.01.T01:CDS
GGTTCAATTCTCATCCCGTT+GGG 0.505017 6:-41750891 MsG0680032457.01.T01:intron
AGGGATACCCGAACCTGTTA+GGG 0.506650 6:-41750924 MsG0680032457.01.T01:CDS
GGGTTCAATTCTCATCCCGT+TGG 0.514224 6:-41750892 MsG0680032457.01.T01:CDS
TTACCCTACCCATACCCAAC+GGG 0.517241 6:+41750877 None:intergenic
GAACCTGTTAGGGACGGGGT+TGG 0.524381 6:-41750914 MsG0680032457.01.T01:CDS
GTGTGAATATCACCCCTGCT+CGG 0.526777 6:-41753628 MsG0680032457.01.T01:CDS
GAGGAAGATGAAGATGAAGA+CGG 0.529823 6:-41753743 MsG0680032457.01.T01:CDS
GTTGTGGGATTGATAAAGTT+GGG 0.530130 6:-41751926 MsG0680032457.01.T01:CDS
GAGCAGCATGCCCACCCTCA+AGG 0.540918 6:+41749197 None:intergenic
ATCGCAAAGAGAGCTGCTCT+TGG 0.541475 6:-41751959 MsG0680032457.01.T01:CDS
TCTGTGACATTTGTGAGAGG+TGG 0.541786 6:-41753664 MsG0680032457.01.T01:CDS
TTTGTGAGAGGTGGTTCCAT+GGG 0.542875 6:-41753655 MsG0680032457.01.T01:CDS
AATCTCAAGAACATGGATCA+AGG 0.543383 6:-41747769 MsG0680032457.01.T01:CDS
TCAGGCCCGGCCTTGAGGGT+GGG 0.543538 6:-41749207 MsG0680032457.01.T01:CDS
GTCAGAACTTCCGTCTGTGG+GGG 0.574517 6:-41749399 MsG0680032457.01.T01:CDS
TGATATTCACACATTTCCCA+TGG 0.578749 6:+41753639 None:intergenic
ATTTGTGAGAGGTGGTTCCA+TGG 0.579292 6:-41753656 MsG0680032457.01.T01:CDS
CGTGATGTAACTAATGTTGG+TGG 0.584106 6:-41749341 MsG0680032457.01.T01:intron
CGATATGCTTAGCCCGAGCA+GGG 0.591452 6:+41753615 None:intergenic
TGTTCGCACAAGAGATCAGA+AGG 0.599144 6:-41747812 MsG0680032457.01.T01:CDS
GGTCAGAACTTCCGTCTGTG+GGG 0.600365 6:-41749400 MsG0680032457.01.T01:CDS
ACCAAGAATCAAGAAATCAA+AGG 0.600496 6:-41747902 MsG0680032457.01.T01:CDS
ACATGGATCAAGGTCATGCA+AGG 0.603844 6:-41747759 MsG0680032457.01.T01:CDS
AGCCCAGAATCTCAAGAACA+TGG 0.610516 6:-41747776 MsG0680032457.01.T01:CDS
AGAAAATACAGAATTTATCA+GGG 0.612724 6:+41753684 None:intergenic
AGAGCTGCTCTTGGTTACAT+CGG 0.619306 6:-41751950 MsG0680032457.01.T01:CDS
ACCCGAACCTGTTAGGGACG+GGG 0.625697 6:-41750918 MsG0680032457.01.T01:CDS
AACACATCCACAAAAGCAGA+AGG 0.627089 6:+41749368 None:intergenic
ATACCCGAACCTGTTAGGGA+CGG 0.660384 6:-41750920 MsG0680032457.01.T01:CDS
GAAGACGGAGAGAACTCATG+TGG 0.691398 6:-41753728 MsG0680032457.01.T01:CDS
GAGAACTCATGTGGTGCATG+CGG 0.697071 6:-41753719 MsG0680032457.01.T01:CDS
GATATGCTTAGCCCGAGCAG+GGG 0.718489 6:+41753616 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGTAACAAAAATTAATTAA+GGG + Chr6:41750970-41750989 None:intergenic 10.0%
!! ATTAAAAAATTATTCAATGT+GGG - Chr6:41750542-41750561 MsG0680032457.01.T01:intron 10.0%
!! ATTTATATGGAATAAAAATA+AGG + Chr6:41748074-41748093 None:intergenic 10.0%
!! TATCTTTGATATTAATAAAA+TGG + Chr6:41747987-41748006 None:intergenic 10.0%
!! TATGTAACAAAAATTAATTA+AGG + Chr6:41750971-41750990 None:intergenic 10.0%
!! TATTAAAAAATTATTCAATG+TGG - Chr6:41750541-41750560 MsG0680032457.01.T01:intron 10.0%
!!! AATATTCAATTTGATTTATA+TGG + Chr6:41748087-41748106 None:intergenic 10.0%
!!! AATGATTTTTTTTTACAAAA+TGG - Chr6:41750796-41750815 MsG0680032457.01.T01:intron 10.0%
!!! AATTAATTTTTGTTACATAT+AGG - Chr6:41750972-41750991 MsG0680032457.01.T01:intron 10.0%
!!! ATATATTTTTTTTATTCAAG+TGG + Chr6:41752394-41752413 None:intergenic 10.0%
!!! TATATTTTTTTTATTCAAGT+GGG + Chr6:41752393-41752412 None:intergenic 10.0%
!!! TTAGACTTAATTTTTTTTTT+TGG + Chr6:41752361-41752380 None:intergenic 10.0%
!! AAAAAAAAATCCAAAACAAA+CGG - Chr6:41750896-41750915 MsG0680032457.01.T01:CDS 15.0%
!! AACAAAAAATTGACTAAATT+AGG + Chr6:41750924-41750943 None:intergenic 15.0%
!! AATGTTATGAATATTATAAG+TGG + Chr6:41748372-41748391 None:intergenic 15.0%
!! ATTATAGTACACTATATTTA+AGG + Chr6:41751050-41751069 None:intergenic 15.0%
!! ATTGAATATTGTAGATATAA+TGG - Chr6:41748097-41748116 MsG0680032457.01.T01:intron 15.0%
!! CAATATGATTAAAGAATTAA+TGG - Chr6:41753504-41753523 MsG0680032457.01.T01:intron 15.0%
!! CATTAATTCTTTAATCATAT+TGG + Chr6:41753506-41753525 None:intergenic 15.0%
!! TAAATATAGTGTACTATAAT+TGG - Chr6:41751050-41751069 MsG0680032457.01.T01:intron 15.0%
!! TATGAAGTTAAAACTTAATT+TGG - Chr6:41752601-41752620 MsG0680032457.01.T01:intron 15.0%
!! TTAAAAAATTATTCAATGTG+GGG - Chr6:41750543-41750562 MsG0680032457.01.T01:intron 15.0%
!!! ACGTTTTAAAAATATGATTA+AGG - Chr6:41749921-41749940 MsG0680032457.01.T01:intron 15.0%
!!! AGTAAGTAATTTTCTAAATA+AGG - Chr6:41749017-41749036 MsG0680032457.01.T01:intron 15.0%
!!! ATATTTTTTTTATTCAAGTG+GGG + Chr6:41752392-41752411 None:intergenic 15.0%
!!! CGTTTTAAAAATATGATTAA+GGG - Chr6:41749922-41749941 MsG0680032457.01.T01:intron 15.0%
!!! TTGTTATTTCTTTATCAATT+AGG - Chr6:41751190-41751209 MsG0680032457.01.T01:intron 15.0%
!! AAAAAGAACTTAAATTGCAT+TGG - Chr6:41753413-41753432 MsG0680032457.01.T01:intron 20.0%
!! AAAAGAAAATAATCATTCGA+AGG + Chr6:41749295-41749314 None:intergenic 20.0%
!! AAAGACATATTATAGTTATC+GGG + Chr6:41752955-41752974 None:intergenic 20.0%
!! AGAAAATACAGAATTTATCA+GGG + Chr6:41747822-41747841 None:intergenic 20.0%
!! ATGTTAAAAAGAATAACCAT+GGG + Chr6:41751868-41751887 None:intergenic 20.0%
!! CAAAACTTTATGTCAAAAAA+AGG + Chr6:41748685-41748704 None:intergenic 20.0%
!! GAAAGACATATTATAGTTAT+CGG + Chr6:41752956-41752975 None:intergenic 20.0%
!! TAACTATAATATGTCTTTCT+TGG - Chr6:41752957-41752976 MsG0680032457.01.T01:intron 20.0%
!! TAAGTGATTATACAAATTGA+GGG + Chr6:41752507-41752526 None:intergenic 20.0%
!! TATGTTAAAAAGAATAACCA+TGG + Chr6:41751869-41751888 None:intergenic 20.0%
!! TTAAGTGATTATACAAATTG+AGG + Chr6:41752508-41752527 None:intergenic 20.0%
!! TTTAACATTCAAGAACATTA+CGG + Chr6:41753276-41753295 None:intergenic 20.0%
!!! AATTATTATGACACTTTTGT+AGG - Chr6:41749880-41749899 MsG0680032457.01.T01:intron 20.0%
!!! AGACAAATCTTTTTTACTAA+TGG - Chr6:41751123-41751142 MsG0680032457.01.T01:intron 20.0%
!!! AGTTTCAACATATTGTTTTT+GGG - Chr6:41752082-41752101 MsG0680032457.01.T01:intron 20.0%
!!! ATAAAATAGTTTTCTGCATT+CGG + Chr6:41750354-41750373 None:intergenic 20.0%
!!! ATGATTATTTTCTTTTTGTG+TGG - Chr6:41749299-41749318 MsG0680032457.01.T01:intron 20.0%
!!! ATTAGTGGATACTATAATTT+AGG - Chr6:41751336-41751355 MsG0680032457.01.T01:intron 20.0%
!!! ATTTGTGCTTTTGTTATTTT+TGG - Chr6:41753246-41753265 MsG0680032457.01.T01:intron 20.0%
!!! CATTTATTTTACTTAATCTG+AGG - Chr6:41752572-41752591 MsG0680032457.01.T01:intron 20.0%
!!! GTTTTCATATCTATATATGT+TGG + Chr6:41748773-41748792 None:intergenic 20.0%
!!! TAAACATACAACATACTTTT+AGG + Chr6:41751516-41751535 None:intergenic 20.0%
!!! TGGTTATTCTTTTTAACATA+TGG - Chr6:41751869-41751888 MsG0680032457.01.T01:intron 20.0%
!!! TGTTACTTATTTTCTTTCTT+CGG - Chr6:41752415-41752434 MsG0680032457.01.T01:intron 20.0%
!!! TTTGTGCTTTTGTTATTTTT+GGG - Chr6:41753247-41753266 MsG0680032457.01.T01:intron 20.0%
! AAAACTACCATTGATACTTA+AGG - Chr6:41750417-41750436 MsG0680032457.01.T01:intron 25.0%
! AAACTACCATTGATACTTAA+GGG - Chr6:41750418-41750437 MsG0680032457.01.T01:intron 25.0%
! AAATTCGGGAAATTAGAATT+CGG - Chr6:41748630-41748649 MsG0680032457.01.T01:intron 25.0%
! AAGTATGTTGTATGTTTATG+TGG - Chr6:41751518-41751537 MsG0680032457.01.T01:intron 25.0%
! AATATGCTCTTAAGATTTAC+TGG + Chr6:41753229-41753248 None:intergenic 25.0%
! ACAACTCAAAATCATATCTA+AGG + Chr6:41748030-41748049 None:intergenic 25.0%
! AGATCAGAAAAATAAGGATT+TGG - Chr6:41749803-41749822 MsG0680032457.01.T01:intron 25.0%
! AGTATGTTGTATGTTTATGT+GGG - Chr6:41751519-41751538 MsG0680032457.01.T01:intron 25.0%
! ATTTCTTTATCAATTAGGTG+TGG - Chr6:41751195-41751214 MsG0680032457.01.T01:intron 25.0%
! CAATTCCATAAATGTTACAT+TGG - Chr6:41753037-41753056 MsG0680032457.01.T01:intron 25.0%
! CAGAAAATACAGAATTTATC+AGG + Chr6:41747823-41747842 None:intergenic 25.0%
! CATATAGCAATTGAGTTATT+GGG + Chr6:41748344-41748363 None:intergenic 25.0%
! CATGAGATTTATGTCTAAAA+AGG + Chr6:41752473-41752492 None:intergenic 25.0%
! CATTAGAGATCAGAAAAATA+AGG - Chr6:41749797-41749816 MsG0680032457.01.T01:intron 25.0%
! CTGAATTTACAAAAATGTGT+TGG + Chr6:41749270-41749289 None:intergenic 25.0%
! GAAGAACTAGATTTAGATTA+GGG + Chr6:41751691-41751710 None:intergenic 25.0%
! TATATTTACCATATCCTACA+TGG + Chr6:41749426-41749445 None:intergenic 25.0%
! TCAAACCAATGTAACATTTA+TGG + Chr6:41753045-41753064 None:intergenic 25.0%
! TGAAGAACTAGATTTAGATT+AGG + Chr6:41751692-41751711 None:intergenic 25.0%
! TTACAAAAATGTGTTGGAAA+TGG + Chr6:41749264-41749283 None:intergenic 25.0%
! TTGAGTATGTTCTTTACTTT+GGG - Chr6:41753061-41753080 MsG0680032457.01.T01:intron 25.0%
! TTGCTTAATGAATGAATTAG+TGG - Chr6:41751321-41751340 MsG0680032457.01.T01:intron 25.0%
! TTTCTTTATCAATTAGGTGT+GGG - Chr6:41751196-41751215 MsG0680032457.01.T01:intron 25.0%
! TTTGAGTATGTTCTTTACTT+TGG - Chr6:41753060-41753079 MsG0680032457.01.T01:intron 25.0%
!! CAGTTTCAACATATTGTTTT+TGG - Chr6:41752081-41752100 MsG0680032457.01.T01:intron 25.0%
!! GCAATATTTCGTTTCATTTT+TGG - Chr6:41752753-41752772 MsG0680032457.01.T01:intron 25.0%
!! TAAAATAGTTTTCTGCATTC+GGG + Chr6:41750353-41750372 None:intergenic 25.0%
!! TGAAATAGCTTTTCATTTTG+AGG - Chr6:41750768-41750787 MsG0680032457.01.T01:intron 25.0%
!!! ATATTTCGTTTCATTTTTGG+TGG - Chr6:41752756-41752775 MsG0680032457.01.T01:intron 25.0%
!!! ATGATTTTGAGTTGTTCATT+TGG - Chr6:41748035-41748054 MsG0680032457.01.T01:intron 25.0%
!!! ATTTCCATTTTTAGCACTTA+AGG + Chr6:41751229-41751248 None:intergenic 25.0%
!!! TATTTCGTTTCATTTTTGGT+GGG - Chr6:41752757-41752776 MsG0680032457.01.T01:intron 25.0%
!!! TCTATTTTTTTCTCAACACA+AGG + Chr6:41750732-41750751 None:intergenic 25.0%
AAAATTATTCAATGTGGGGA+CGG - Chr6:41750547-41750566 MsG0680032457.01.T01:intron 30.0%
AACTACCATTGATACTTAAG+GGG - Chr6:41750419-41750438 MsG0680032457.01.T01:intron 30.0%
AAGATCATGGAGAAAACATA+TGG + Chr6:41752907-41752926 None:intergenic 30.0%
AATTATATGACAATCGGGTA+TGG - Chr6:41750654-41750673 MsG0680032457.01.T01:intron 30.0%
AATTCGGGAAATTAGAATTC+GGG - Chr6:41748631-41748650 MsG0680032457.01.T01:intron 30.0%
AATTGCTCTCGGAATAAATT+CGG - Chr6:41748615-41748634 MsG0680032457.01.T01:intron 30.0%
ACAAAAAGGCAACAAATCAT+CGG + Chr6:41748452-41748471 None:intergenic 30.0%
ACCAAGAATCAAGAAATCAA+AGG - Chr6:41753601-41753620 MsG0680032457.01.T01:intron 30.0%
ACGGGTAATTATATGACAAT+CGG - Chr6:41750648-41750667 MsG0680032457.01.T01:intron 30.0%
ACGTAAGTATTTGCTCAAAA+TGG - Chr6:41749611-41749630 MsG0680032457.01.T01:intron 30.0%
AGAACAAAAACAGCACAAAA+AGG + Chr6:41748466-41748485 None:intergenic 30.0%
AGTTATACAGTGAAGAAAAC+TGG + Chr6:41748891-41748910 None:intergenic 30.0%
ATGCATTACAACATTTCTCT+AGG - Chr6:41750493-41750512 MsG0680032457.01.T01:intron 30.0%
ATGGACTTTGATTATTTCCT+TGG - Chr6:41753523-41753542 MsG0680032457.01.T01:intron 30.0%
ATGTCCAAAGAAGTTATTGA+CGG + Chr6:41749341-41749360 None:intergenic 30.0%
ATTATATGACAATCGGGTAT+GGG - Chr6:41750655-41750674 MsG0680032457.01.T01:intron 30.0%
CCAATAACTCAATTGCTATA+TGG - Chr6:41748342-41748361 MsG0680032457.01.T01:intron 30.0%
CCATATAGCAATTGAGTTAT+TGG + Chr6:41748345-41748364 None:intergenic 30.0%
CGTAAGTATTTGCTCAAAAT+GGG - Chr6:41749612-41749631 MsG0680032457.01.T01:intron 30.0%
GCTGTTGTATTATTAGAAGA+GGG - Chr6:41748503-41748522 MsG0680032457.01.T01:intron 30.0%
GTAGAGAAATACAATGACTT+GGG - Chr6:41748259-41748278 MsG0680032457.01.T01:intron 30.0%
TAAGGATTTGGATGATACTT+CGG - Chr6:41749815-41749834 MsG0680032457.01.T01:intron 30.0%
TAGAGAAATACAATGACTTG+GGG - Chr6:41748260-41748279 MsG0680032457.01.T01:intron 30.0%
TATAAACTACATGCCATCAT+CGG - Chr6:41752804-41752823 MsG0680032457.01.T01:intron 30.0%
TCATCCTTAAGTGCTAAAAA+TGG - Chr6:41751222-41751241 MsG0680032457.01.T01:intron 30.0%
TCTTTGGACATGATTAATCA+AGG - Chr6:41749350-41749369 MsG0680032457.01.T01:CDS 30.0%
TGCATTACAACATTTCTCTA+GGG - Chr6:41750494-41750513 MsG0680032457.01.T01:intron 30.0%
TGCTGTTGTATTATTAGAAG+AGG - Chr6:41748502-41748521 MsG0680032457.01.T01:intron 30.0%
TGTAGAGAAATACAATGACT+TGG - Chr6:41748258-41748277 MsG0680032457.01.T01:intron 30.0%
TTCATTCTTGAATGTTCTTG+AGG - Chr6:41751251-41751270 MsG0680032457.01.T01:intron 30.0%
TTCTCTTTGTATGTGCAATT+AGG - Chr6:41748217-41748236 MsG0680032457.01.T01:intron 30.0%
! AAATTAGGAACCGTTTGTTT+TGG + Chr6:41750909-41750928 None:intergenic 30.0%
! AACTCTATTTTGTGGACAAA+AGG + Chr6:41748973-41748992 None:intergenic 30.0%
! CTTTTCAATGTAGCAATGAT+TGG + Chr6:41751082-41751101 None:intergenic 30.0%
! GGGTCATACTATTAGTTTAT+TGG + Chr6:41748324-41748343 None:intergenic 30.0%
! TCCTTTGATTTCTTGATTCT+TGG + Chr6:41753605-41753624 None:intergenic 30.0%
!! AATTTGGAGTGTCTATTTTG+TGG - Chr6:41752617-41752636 MsG0680032457.01.T01:intron 30.0%
!! ACTAATGGATTGCTTGATTA+TGG - Chr6:41751138-41751157 MsG0680032457.01.T01:intron 30.0%
!! GTAAAAGGGTATTAGGAAAA+GGG + Chr6:41752858-41752877 None:intergenic 30.0%
!! TGCATTGGTTGAAAGTAAAT+TGG - Chr6:41753428-41753447 MsG0680032457.01.T01:intron 30.0%
!! TGTAAAAGGGTATTAGGAAA+AGG + Chr6:41752859-41752878 None:intergenic 30.0%
!!! ACCACTTTTTTTACTCTTCA+TGG + Chr6:41748814-41748833 None:intergenic 30.0%
!!! AGTTTTGATTTACACCTGAT+TGG - Chr6:41748698-41748717 MsG0680032457.01.T01:intron 30.0%
!!! CCACTTTTTTTACTCTTCAT+GGG + Chr6:41748813-41748832 None:intergenic 30.0%
!!! GATTTTGAGTTGAAAGAATC+TGG - Chr6:41749974-41749993 MsG0680032457.01.T01:intron 30.0%
!!! GGTACAACAATGTTGTTTTA+GGG - Chr6:41751951-41751970 MsG0680032457.01.T01:CDS 30.0%
!!! GTTTTGATTTACACCTGATT+GGG - Chr6:41748699-41748718 MsG0680032457.01.T01:intron 30.0%
!!! TATGTGTTTACGCTGATTTT+TGG - Chr6:41753162-41753181 MsG0680032457.01.T01:intron 30.0%
!!! TTTTTTTTTTACCTCCTGTG+TGG + Chr6:41749858-41749877 None:intergenic 30.0%
AAAGTTTAGAGAGAGAGAGA+TGG + Chr6:41751616-41751635 None:intergenic 35.0%
AAATTATTCAATGTGGGGAC+GGG - Chr6:41750548-41750567 MsG0680032457.01.T01:intron 35.0%
AACCAAAGAATGCTATTCCT+AGG + Chr6:41749130-41749149 None:intergenic 35.0%
AAGAGAGACAATATCATGCA+GGG + Chr6:41753130-41753149 None:intergenic 35.0%
AAGGACGTTAATTGTGTAGT+GGG + Chr6:41748562-41748581 None:intergenic 35.0%
AAGGATGTTGTTCAAGGTTA+AGG + Chr6:41748954-41748973 None:intergenic 35.0%
AAGTTTCGATTGAAGTCAAC+TGG + Chr6:41753333-41753352 None:intergenic 35.0%
AATCAGCGTAAACACATACA+CGG + Chr6:41753160-41753179 None:intergenic 35.0%
AATCTCAAGAACATGGATCA+AGG - Chr6:41753734-41753753 MsG0680032457.01.T01:CDS 35.0%
AGAACAAATCTAAACCACAC+AGG - Chr6:41749841-41749860 MsG0680032457.01.T01:intron 35.0%
AGAATAGAGAGAGAAGAAAG+AGG - Chr6:41748185-41748204 MsG0680032457.01.T01:intron 35.0%
AGAGCACAAGTTAAATACCA+AGG + Chr6:41753543-41753562 None:intergenic 35.0%
AGATTTAGATTAGGGAGGTA+GGG + Chr6:41751683-41751702 None:intergenic 35.0%
AGTTAACGACTACATGAACA+AGG + Chr6:41752226-41752245 None:intergenic 35.0%
AGTTACCCCTTAAGTATCAA+TGG + Chr6:41750427-41750446 None:intergenic 35.0%
AGTTGTGGGATTGATAAAGT+TGG - Chr6:41749576-41749595 MsG0680032457.01.T01:intron 35.0%
AGTTTCGATTGAAGTCAACT+GGG + Chr6:41753332-41753351 None:intergenic 35.0%
ATACCCATACCCAATCAAAA+CGG + Chr6:41750242-41750261 None:intergenic 35.0%
ATCACCGTCAATAACTTCTT+TGG - Chr6:41749334-41749353 MsG0680032457.01.T01:intron 35.0%
ATCCATGTTCTTGAGATTCT+GGG + Chr6:41753732-41753751 None:intergenic 35.0%
ATCTCTAACAGATGCATTGA+TGG - Chr6:41749480-41749499 MsG0680032457.01.T01:intron 35.0%
ATTGCTCTCGGAATAAATTC+GGG - Chr6:41748616-41748635 MsG0680032457.01.T01:intron 35.0%
CAAAAAGGCAACAAATCATC+GGG + Chr6:41748451-41748470 None:intergenic 35.0%
CAAGAGAATTCTTGTTCACA+AGG + Chr6:41751443-41751462 None:intergenic 35.0%
CAATTAACGTCCTTGTATTG+TGG - Chr6:41748568-41748587 MsG0680032457.01.T01:intron 35.0%
CCCATGAAGAGTAAAAAAAG+TGG - Chr6:41748810-41748829 MsG0680032457.01.T01:intron 35.0%
CCTAGGTAAGTCATTCAAAT+GGG + Chr6:41749113-41749132 None:intergenic 35.0%
CGGGTAATTATATGACAATC+GGG - Chr6:41750649-41750668 MsG0680032457.01.T01:intron 35.0%
CTTCGAGAGCAATAACAATA+TGG - Chr6:41748297-41748316 MsG0680032457.01.T01:intron 35.0%
CTTCGTGATGTAACTAATGT+TGG - Chr6:41752159-41752178 MsG0680032457.01.T01:intron 35.0%
GAACTAGATTTAGATTAGGG+AGG + Chr6:41751688-41751707 None:intergenic 35.0%
GATGATTTCACAAACCATGT+AGG - Chr6:41749409-41749428 MsG0680032457.01.T01:CDS 35.0%
GATGCGACAAATATTGTTGA+TGG + Chr6:41749458-41749477 None:intergenic 35.0%
GCATTACAACATTTCTCTAG+GGG - Chr6:41750495-41750514 MsG0680032457.01.T01:intron 35.0%
GGCTAATGAAAGAGAAAAGA+GGG - Chr6:41749649-41749668 MsG0680032457.01.T01:intron 35.0%
GGTTATCATCAGTCTCAAAA+AGG - Chr6:41752978-41752997 MsG0680032457.01.T01:intron 35.0%
GTATTTGCTCAAAATGGGAA+AGG - Chr6:41749617-41749636 MsG0680032457.01.T01:intron 35.0%
GTTGTGGGATTGATAAAGTT+GGG - Chr6:41749577-41749596 MsG0680032457.01.T01:intron 35.0%
TAAGAGAGACAATATCATGC+AGG + Chr6:41753131-41753150 None:intergenic 35.0%
TACCTAGGAATAGCATTCTT+TGG - Chr6:41749125-41749144 MsG0680032457.01.T01:intron 35.0%
TAGATTTAGATTAGGGAGGT+AGG + Chr6:41751684-41751703 None:intergenic 35.0%
TAGGAAAAGGGATATAGTGT+GGG + Chr6:41752846-41752865 None:intergenic 35.0%
TCAACACATGTAGATTTAGC+TGG - Chr6:41751709-41751728 MsG0680032457.01.T01:intron 35.0%
TCCTAGGTAAGTCATTCAAA+TGG + Chr6:41749114-41749133 None:intergenic 35.0%
TGAATTGTGGGCAATTGAAA+TGG - Chr6:41748531-41748550 MsG0680032457.01.T01:intron 35.0%
TGATATTCACACATTTCCCA+TGG + Chr6:41747867-41747886 None:intergenic 35.0%
TGATTACCTAATACCGATGA+TGG + Chr6:41752820-41752839 None:intergenic 35.0%
TGTTATTGCTCTCGAAGTTA+TGG + Chr6:41748294-41748313 None:intergenic 35.0%
TTAGGAAAAGGGATATAGTG+TGG + Chr6:41752847-41752866 None:intergenic 35.0%
TTATATGACAATCGGGTATG+GGG - Chr6:41750656-41750675 MsG0680032457.01.T01:intron 35.0%
TTCACAAACCATGTAGGATA+TGG - Chr6:41749415-41749434 MsG0680032457.01.T01:CDS 35.0%
TTTCAATTGCCCACAATTCA+CGG + Chr6:41748531-41748550 None:intergenic 35.0%
! CTTGAGTGTTTTACTAAGAC+AGG - Chr6:41753561-41753580 MsG0680032457.01.T01:intron 35.0%
! GTCTATTTTGTGGCTTCTAA+TGG - Chr6:41752627-41752646 MsG0680032457.01.T01:intron 35.0%
! GTTTTACTAAGACAGGAACA+AGG - Chr6:41753568-41753587 MsG0680032457.01.T01:intron 35.0%
! TCATGCTTTTCCACAATACA+AGG + Chr6:41748581-41748600 None:intergenic 35.0%
! TCCACAAAATAGAGTTCTAG+CGG - Chr6:41748977-41748996 MsG0680032457.01.T01:intron 35.0%
! TTGATTGGCTAAATTGCTCT+CGG - Chr6:41748604-41748623 MsG0680032457.01.T01:intron 35.0%
! TTTGTGTATGAGTTTGGAGT+GGG + Chr6:41750325-41750344 None:intergenic 35.0%
! TTTTCTCAACACAAGGAACT+AGG + Chr6:41750725-41750744 None:intergenic 35.0%
! TTTTCTGTGACATTTGTGAG+AGG - Chr6:41747836-41747855 MsG0680032457.01.T01:CDS 35.0%
! TTTTTATTCAAGTGGGGTGT+GGG + Chr6:41752386-41752405 None:intergenic 35.0%
!! AGGGTTTAGTTTGTGAAAAG+AGG - Chr6:41749714-41749733 MsG0680032457.01.T01:intron 35.0%
!! CTCTTGTTGTTATTGCATGA+TGG + Chr6:41747928-41747947 None:intergenic 35.0%
!! GGAAAAGCATGAGTTTTGAT+TGG - Chr6:41748589-41748608 MsG0680032457.01.T01:intron 35.0%
!! GGGTTTAGTTTGTGAAAAGA+GGG - Chr6:41749715-41749734 MsG0680032457.01.T01:intron 35.0%
!! TTCAATTCCTTCTGCTTTTG+TGG - Chr6:41752128-41752147 MsG0680032457.01.T01:intron 35.0%
!! TTCGTGTTGTTTAATGTGCT+TGG - Chr6:41751991-41752010 MsG0680032457.01.T01:CDS 35.0%
!! TTTTGATTGGGTATGGGTAT+GGG - Chr6:41750242-41750261 MsG0680032457.01.T01:intron 35.0%
!!! CGGTACAACAATGTTGTTTT+AGG - Chr6:41751950-41751969 MsG0680032457.01.T01:CDS 35.0%
!!! GATTTTTGGTAAACAAACGC+TGG - Chr6:41753176-41753195 MsG0680032457.01.T01:intron 35.0%
!!! TTTTTTATTCAAGTGGGGTG+TGG + Chr6:41752387-41752406 None:intergenic 35.0%
AACACATCCACAAAAGCAGA+AGG + Chr6:41752138-41752157 None:intergenic 40.0%
AACATATGGACCTAGTGACA+TGG + Chr6:41752893-41752912 None:intergenic 40.0%
AAGAACGAATGTGTGAGTTG+AGG - Chr6:41749694-41749713 MsG0680032457.01.T01:intron 40.0%
AATGTGCTTGGCTAATATCG+CGG - Chr6:41752003-41752022 MsG0680032457.01.T01:CDS 40.0%
AATTATTCAATGTGGGGACG+GGG - Chr6:41750549-41750568 MsG0680032457.01.T01:intron 40.0%
ACAAATCATCGGGATACTCT+CGG + Chr6:41748441-41748460 None:intergenic 40.0%
ACAAATCTAAACCACACAGG+AGG - Chr6:41749844-41749863 MsG0680032457.01.T01:intron 40.0%
ACATATGGACCTAGTGACAT+GGG + Chr6:41752892-41752911 None:intergenic 40.0%
ACATTCGTTCTTCTCACGTA+GGG + Chr6:41749686-41749705 None:intergenic 40.0%
AGTGAAGAAAACTGGTGTAG+TGG + Chr6:41748883-41748902 None:intergenic 40.0%
CAAGGACGTTAATTGTGTAG+TGG + Chr6:41748563-41748582 None:intergenic 40.0%
CATGAACAAGGTGGAAAAAG+TGG + Chr6:41752214-41752233 None:intergenic 40.0%
CCCATTTGAATGACTTACCT+AGG - Chr6:41749110-41749129 MsG0680032457.01.T01:intron 40.0%
CCGAACTAAACCCAATTTGA+CGG - Chr6:41750211-41750230 MsG0680032457.01.T01:intron 40.0%
CCGTCAAATTGGGTTTAGTT+CGG + Chr6:41750214-41750233 None:intergenic 40.0%
CGAACTAAACCCAATTTGAC+GGG - Chr6:41750212-41750231 MsG0680032457.01.T01:intron 40.0%
CGGCTAATGAAAGAGAAAAG+AGG - Chr6:41749648-41749667 MsG0680032457.01.T01:intron 40.0%
CGTGATGTAACTAATGTTGG+TGG - Chr6:41752162-41752181 MsG0680032457.01.T01:intron 40.0%
CTGATACACCCCAAAGAAAT+GGG - Chr6:41752673-41752692 MsG0680032457.01.T01:intron 40.0%
CTTACACTTGAGTTCCTTGT+AGG - Chr6:41750154-41750173 MsG0680032457.01.T01:intron 40.0%
GAGGAAGATGAAGATGAAGA+CGG - Chr6:41747760-41747779 MsG0680032457.01.T01:CDS 40.0%
GATCCATGTTCTTGAGATTC+TGG + Chr6:41753733-41753752 None:intergenic 40.0%
GATTGCTTGATTATGGACGA+AGG - Chr6:41751145-41751164 MsG0680032457.01.T01:intron 40.0%
GATTTAGATTAGGGAGGTAG+GGG + Chr6:41751682-41751701 None:intergenic 40.0%
GGACAAAAGGATGTTGTTCA+AGG + Chr6:41748960-41748979 None:intergenic 40.0%
GTTTGTGTATGAGTTTGGAG+TGG + Chr6:41750326-41750345 None:intergenic 40.0%
TAACGACTACATGAACAAGG+TGG + Chr6:41752223-41752242 None:intergenic 40.0%
TACATGCCATCATCGGTATT+AGG - Chr6:41752811-41752830 MsG0680032457.01.T01:intron 40.0%
TACCCATACCCAATCAAAAC+GGG + Chr6:41750241-41750260 None:intergenic 40.0%
TAGGCATATCGACGTTAAGA+TGG + Chr6:41753107-41753126 None:intergenic 40.0%
TCCCAGTTTCATGTCATCAA+GGG + Chr6:41747957-41747976 None:intergenic 40.0%
TCTCTAATGCTTCTTCTGAG+CGG + Chr6:41749786-41749805 None:intergenic 40.0%
TGAACAGATAGAACCCAATC+AGG + Chr6:41748715-41748734 None:intergenic 40.0%
TGGTACACAGATTCATGTTG+AGG - Chr6:41753448-41753467 MsG0680032457.01.T01:intron 40.0%
TGTGCATCGAAAGTTATTGC+TGG + Chr6:41749180-41749199 None:intergenic 40.0%
TTGACGTACAATCGAAGAGT+AGG + Chr6:41753020-41753039 None:intergenic 40.0%
TTTATGTGGGTGTGTCTAGT+TGG - Chr6:41751532-41751551 MsG0680032457.01.T01:intron 40.0%
TTTCTCCATGATCTTTCTCC+TGG - Chr6:41752912-41752931 MsG0680032457.01.T01:intron 40.0%
! AAATTGGGTTTAGTTCGGGT+GGG + Chr6:41750209-41750228 None:intergenic 40.0%
! AGAACGAATGTGTGAGTTGA+GGG - Chr6:41749695-41749714 MsG0680032457.01.T01:intron 40.0%
! ATAGTTTTCTGCATTCGGGA+TGG + Chr6:41750349-41750368 None:intergenic 40.0%
! CCACAAAATAGAGTTCTAGC+GGG - Chr6:41748978-41748997 MsG0680032457.01.T01:intron 40.0%
! CGTCAAATTGGGTTTAGTTC+GGG + Chr6:41750213-41750232 None:intergenic 40.0%
! GATGGGTTTGTGTATGAGTT+TGG + Chr6:41750331-41750350 None:intergenic 40.0%
! GTCCATTGATTAGTGTGAGT+CGG - Chr6:41752029-41752048 MsG0680032457.01.T01:intron 40.0%
! GTTTAAAGTTTGTCCAGACC+AGG + Chr6:41752933-41752952 None:intergenic 40.0%
! GTTTTCCCGATTCCAAAACA+CGG - Chr6:41750270-41750289 MsG0680032457.01.T01:intron 40.0%
! TAAATCAGTCTCTAGCTCAC+AGG - Chr6:41749227-41749246 MsG0680032457.01.T01:intron 40.0%
! TAGTTTTCTGCATTCGGGAT+GGG + Chr6:41750348-41750367 None:intergenic 40.0%
! TCCATTGATTAGTGTGAGTC+GGG - Chr6:41752030-41752049 MsG0680032457.01.T01:intron 40.0%
! TTTTCCCGATTCCAAAACAC+GGG - Chr6:41750271-41750290 MsG0680032457.01.T01:intron 40.0%
!! AGCGAGTGTAAAAGGGTATT+AGG + Chr6:41752865-41752884 None:intergenic 40.0%
!!! GAGATGCTGATTTTTGTGCT+CGG + Chr6:41752702-41752721 None:intergenic 40.0%
!!! GTTTTGATTGGGTATGGGTA+TGG - Chr6:41750241-41750260 MsG0680032457.01.T01:intron 40.0%
!!! TTCGTTTCATTTTTGGTGGG+AGG - Chr6:41752760-41752779 MsG0680032457.01.T01:intron 40.0%
AAGAGGGTTCCGTGAATTGT+GGG - Chr6:41748519-41748538 MsG0680032457.01.T01:intron 45.0%
AAGGAACTAGGCATGGCAAT+GGG + Chr6:41750713-41750732 None:intergenic 45.0%
AATTCTCATCCCGTTGGGTA+TGG - Chr6:41750617-41750636 MsG0680032457.01.T01:intron 45.0%
ACAAGGTGGAAAAAGTGGTG+CGG + Chr6:41752209-41752228 None:intergenic 45.0%
ACATGGATCAAGGTCATGCA+AGG - Chr6:41753744-41753763 MsG0680032457.01.T01:CDS 45.0%
ACCCATACCCAATCAAAACG+GGG + Chr6:41750240-41750259 None:intergenic 45.0%
ACTTGAGTTCCTTGTAGGCA+TGG - Chr6:41750159-41750178 MsG0680032457.01.T01:intron 45.0%
AGAGCTGCTCTTGGTTACAT+CGG - Chr6:41749553-41749572 MsG0680032457.01.T01:intron 45.0%
AGCCCAGAATCTCAAGAACA+TGG - Chr6:41753727-41753746 MsG0680032457.01.T01:CDS 45.0%
AGCGTAAACACATACACGGT+AGG + Chr6:41753156-41753175 None:intergenic 45.0%
ATTCTCATCCCGTTGGGTAT+GGG - Chr6:41750618-41750637 MsG0680032457.01.T01:intron 45.0%
ATTGGGTATGGGTATGGGTT+TGG - Chr6:41750247-41750266 MsG0680032457.01.T01:intron 45.0%
ATTTGTGAGAGGTGGTTCCA+TGG - Chr6:41747847-41747866 MsG0680032457.01.T01:CDS 45.0%
CAAATCATCGGGATACTCTC+GGG + Chr6:41748440-41748459 None:intergenic 45.0%
CACATTCGTTCTTCTCACGT+AGG + Chr6:41749687-41749706 None:intergenic 45.0%
CATATGGACCTAGTGACATG+GGG + Chr6:41752891-41752910 None:intergenic 45.0%
CGATTCCAAAACACGGGTAT+GGG - Chr6:41750277-41750296 MsG0680032457.01.T01:intron 45.0%
CTCTTTGCGATCTCTATGCT+TGG + Chr6:41749535-41749554 None:intergenic 45.0%
CTTGGTTACATCGGAGTTGT+GGG - Chr6:41749562-41749581 MsG0680032457.01.T01:intron 45.0%
GAGACAATATCATGCAGGGT+AGG + Chr6:41753126-41753145 None:intergenic 45.0%
GCAAGGCACATGTGACATAA+AGG - Chr6:41753761-41753780 MsG0680032457.01.T01:CDS 45.0%
GCTGATACACCCCAAAGAAA+TGG - Chr6:41752672-41752691 MsG0680032457.01.T01:intron 45.0%
GGTTCAATTCTCATCCCGTT+GGG - Chr6:41750612-41750631 MsG0680032457.01.T01:intron 45.0%
GTATAACTACGCCACTACGT+CGG - Chr6:41748903-41748922 MsG0680032457.01.T01:intron 45.0%
GTCCCAGTTTCATGTCATCA+AGG + Chr6:41747958-41747977 None:intergenic 45.0%
GTGTAGTGCTGTAAGAGAGA+AGG + Chr6:41751647-41751666 None:intergenic 45.0%
GTGTTGGAAATGGTTTGACG+CGG + Chr6:41749254-41749273 None:intergenic 45.0%
TCAACACAAGGAACTAGGCA+TGG + Chr6:41750720-41750739 None:intergenic 45.0%
TCGATTGAAGTCAACTGGGT+TGG + Chr6:41753328-41753347 None:intergenic 45.0%
TCTGTGACATTTGTGAGAGG+TGG - Chr6:41747839-41747858 MsG0680032457.01.T01:CDS 45.0%
TCTTGGTTACATCGGAGTTG+TGG - Chr6:41749561-41749580 MsG0680032457.01.T01:intron 45.0%
TGAGAACTCATTTCCACCCT+CGG - Chr6:41751751-41751770 MsG0680032457.01.T01:intron 45.0%
TGTTCGCACAAGAGATCAGA+AGG - Chr6:41753691-41753710 MsG0680032457.01.T01:CDS 45.0%
TTGGGTATGGGTATGGGTTT+GGG - Chr6:41750248-41750267 MsG0680032457.01.T01:intron 45.0%
TTGGTGGGAGGATGTTCTAA+CGG - Chr6:41752772-41752791 MsG0680032457.01.T01:intron 45.0%
TTTGTGAGAGGTGGTTCCAT+GGG - Chr6:41747848-41747867 MsG0680032457.01.T01:CDS 45.0%
! ACGTCGGTTACGAGATAGAT+TGG - Chr6:41748919-41748938 MsG0680032457.01.T01:intron 45.0%
! AGCTAGAGACTGATTTACGC+TGG + Chr6:41749224-41749243 None:intergenic 45.0%
! CAAATTGGGTTTAGTTCGGG+TGG + Chr6:41750210-41750229 None:intergenic 45.0%
! CCCGCTAGAACTCTATTTTG+TGG + Chr6:41748981-41749000 None:intergenic 45.0%
! GCCCTTGATGACATGAAACT+GGG - Chr6:41747953-41747972 MsG0680032457.01.T01:intron 45.0%
! TCTTTTGTGCAGTCGTCATC+AGG - Chr6:41752278-41752297 MsG0680032457.01.T01:intron 45.0%
! TTGGTTCGTGTTGTGTTTGG+GGG - Chr6:41751921-41751940 MsG0680032457.01.T01:CDS 45.0%
! TTTTGGCCCATACCTTTTGC+AGG + Chr6:41752344-41752363 None:intergenic 45.0%
!! GGTTGGTTCGTGTTGTGTTT+GGG - Chr6:41751919-41751938 MsG0680032457.01.T01:CDS 45.0%
!! GTTGGTTCGTGTTGTGTTTG+GGG - Chr6:41751920-41751939 MsG0680032457.01.T01:CDS 45.0%
!! GTTTTGTTGCCATGCCTACA+AGG + Chr6:41750171-41750190 None:intergenic 45.0%
!! TGGTTGGTTCGTGTTGTGTT+TGG - Chr6:41751918-41751937 MsG0680032457.01.T01:CDS 45.0%
!!! CATACCCGTGTTTTGGAATC+GGG + Chr6:41750278-41750297 None:intergenic 45.0%
!!! CCATACCCGTGTTTTGGAAT+CGG + Chr6:41750279-41750298 None:intergenic 45.0%
!!! TCCCCGTTTTGATTGGGTAT+GGG - Chr6:41750236-41750255 MsG0680032457.01.T01:intron 45.0%
!!! TTCCCCGTTTTGATTGGGTA+TGG - Chr6:41750235-41750254 MsG0680032457.01.T01:intron 45.0%
!!! ATTATCTTTAAAATTAATTA+GGG + Chr6:41753480-41753499 None:intergenic 5.0%
!!! TATTATCTTTAAAATTAATT+AGG + Chr6:41753481-41753500 None:intergenic 5.0%
AAACGGGGAACCCGTCAAAT+TGG + Chr6:41750225-41750244 None:intergenic 50.0%
AAATGGGAAAGGAGCAGCAG+CGG - Chr6:41749628-41749647 MsG0680032457.01.T01:intron 50.0%
AACCAGCGAGCACAAGAACT+TGG + Chr6:41751903-41751922 None:intergenic 50.0%
AACGGGGAACCCGTCAAATT+GGG + Chr6:41750224-41750243 None:intergenic 50.0%
AAGTTCTTGTGCTCGCTGGT+TGG - Chr6:41751902-41751921 MsG0680032457.01.T01:intron 50.0%
ACCAGCGAGCACAAGAACTT+GGG + Chr6:41751902-41751921 None:intergenic 50.0%
ACCGGATCAACATGAACGAC+GGG + Chr6:41751790-41751809 None:intergenic 50.0%
AGGAACTAGGCATGGCAATG+GGG + Chr6:41750712-41750731 None:intergenic 50.0%
AGGGATACCCGAACCTGTTA+GGG - Chr6:41750579-41750598 MsG0680032457.01.T01:intron 50.0%
ATACCCGAACCTGTTAGGGA+CGG - Chr6:41750583-41750602 MsG0680032457.01.T01:intron 50.0%
ATCGCAAAGAGAGCTGCTCT+TGG - Chr6:41749544-41749563 MsG0680032457.01.T01:intron 50.0%
ATGACAATCGGGTATGGGGA+CGG - Chr6:41750660-41750679 MsG0680032457.01.T01:intron 50.0%
CAAGGAACTAGGCATGGCAA+TGG + Chr6:41750714-41750733 None:intergenic 50.0%
CACCGGATCAACATGAACGA+CGG + Chr6:41751791-41751810 None:intergenic 50.0%
CCAGACCAGGAGAAAGATCA+TGG + Chr6:41752920-41752939 None:intergenic 50.0%
CCATGATCTTTCTCCTGGTC+TGG - Chr6:41752917-41752936 MsG0680032457.01.T01:intron 50.0%
CCGATTCCAAAACACGGGTA+TGG - Chr6:41750276-41750295 MsG0680032457.01.T01:intron 50.0%
CTATCTCGTAACCGACGTAG+TGG + Chr6:41748917-41748936 None:intergenic 50.0%
CTCGGCTACCCATTTCTTTG+GGG + Chr6:41752684-41752703 None:intergenic 50.0%
GAAGACGGAGAGAACTCATG+TGG - Chr6:41747775-41747794 MsG0680032457.01.T01:CDS 50.0%
GAAGAGGGTTCCGTGAATTG+TGG - Chr6:41748518-41748537 MsG0680032457.01.T01:intron 50.0%
GAGAACTCATGTGGTGCATG+CGG - Chr6:41747784-41747803 MsG0680032457.01.T01:CDS 50.0%
GCCCGACTCACACTAATCAA+TGG + Chr6:41752034-41752053 None:intergenic 50.0%
GCTCGGCTACCCATTTCTTT+GGG + Chr6:41752685-41752704 None:intergenic 50.0%
GGCAACAAAACTCATACCCG+TGG - Chr6:41750180-41750199 MsG0680032457.01.T01:intron 50.0%
GGGTTCAATTCTCATCCCGT+TGG - Chr6:41750611-41750630 MsG0680032457.01.T01:intron 50.0%
GTCGTTCATGTTGATCCGGT+GGG - Chr6:41751790-41751809 MsG0680032457.01.T01:intron 50.0%
GTGTGAATATCACCCCTGCT+CGG - Chr6:41747875-41747894 MsG0680032457.01.T01:CDS 50.0%
GTTACCCTACCCATACCCAA+CGG + Chr6:41750630-41750649 None:intergenic 50.0%
GTTGGGTATGGGTAGGGTAA+CGG - Chr6:41750629-41750648 MsG0680032457.01.T01:intron 50.0%
GTTGTGTTTGGGGGTTGCAA+CGG - Chr6:41751930-41751949 MsG0680032457.01.T01:CDS 50.0%
TCCAAAACACGGGTATGGGA+CGG - Chr6:41750281-41750300 MsG0680032457.01.T01:intron 50.0%
TGATTAGTGTGAGTCGGGCA+TGG - Chr6:41752035-41752054 MsG0680032457.01.T01:intron 50.0%
TGCTCGGCTACCCATTTCTT+TGG + Chr6:41752686-41752705 None:intergenic 50.0%
TGTGAATATCACCCCTGCTC+GGG - Chr6:41747876-41747895 MsG0680032457.01.T01:CDS 50.0%
TTACCCTACCCATACCCAAC+GGG + Chr6:41750629-41750648 None:intergenic 50.0%
TTAGATTAGGGAGGTAGGGG+AGG + Chr6:41751679-41751698 None:intergenic 50.0%
TTAGTTCGGGTGGGTAACCA+CGG + Chr6:41750200-41750219 None:intergenic 50.0%
TTGGGTATGGGTAGGGTAAC+GGG - Chr6:41750630-41750649 MsG0680032457.01.T01:intron 50.0%
! CGCCCTTGATGACATGAAAC+TGG - Chr6:41747952-41747971 MsG0680032457.01.T01:intron 50.0%
! CTGAAGGTGTGCTTAACCCA+TGG - Chr6:41751849-41751868 MsG0680032457.01.T01:intron 50.0%
!!! ACGGGTTCCCCGTTTTGATT+GGG - Chr6:41750230-41750249 MsG0680032457.01.T01:intron 50.0%
AACATGAACGACGGGGGTTG+AGG + Chr6:41751782-41751801 None:intergenic 55.0%
AACCCCGTCCCTAACAGGTT+CGG + Chr6:41750590-41750609 None:intergenic 55.0%
AACCTGTTAGGGACGGGGTT+GGG - Chr6:41750590-41750609 MsG0680032457.01.T01:intron 55.0%
AACTAGGCATGGCAATGGGG+CGG + Chr6:41750709-41750728 None:intergenic 55.0%
ATGGACCTAGTGACATGGGG+TGG + Chr6:41752888-41752907 None:intergenic 55.0%
ATTAGGGAGGTAGGGGAGGA+TGG + Chr6:41751675-41751694 None:intergenic 55.0%
ATTCAATGTGGGGACGGGGA+TGG - Chr6:41750553-41750572 MsG0680032457.01.T01:intron 55.0%
CAGGGATACCCGAACCTGTT+AGG - Chr6:41750578-41750597 MsG0680032457.01.T01:intron 55.0%
CATCCCGTTGGGTATGGGTA+GGG - Chr6:41750623-41750642 MsG0680032457.01.T01:intron 55.0%
CCAAAACACGGGTATGGGAC+GGG - Chr6:41750282-41750301 MsG0680032457.01.T01:intron 55.0%
CCCCGTCGTTCATGTTGATC+CGG - Chr6:41751786-41751805 MsG0680032457.01.T01:intron 55.0%
CCGGATCAACATGAACGACG+GGG + Chr6:41751789-41751808 None:intergenic 55.0%
CGATATGCTTAGCCCGAGCA+GGG + Chr6:41747891-41747910 None:intergenic 55.0%
CGGATCAACATGAACGACGG+GGG + Chr6:41751788-41751807 None:intergenic 55.0%
CGTCGTTCATGTTGATCCGG+TGG - Chr6:41751789-41751808 MsG0680032457.01.T01:intron 55.0%
GATATGCTTAGCCCGAGCAG+GGG + Chr6:41747890-41747909 None:intergenic 55.0%
GCTTGTGCTCTCGCATTCGA+TGG - Chr6:41751823-41751842 MsG0680032457.01.T01:intron 55.0%
GGAATTGAAGCCCCCACAGA+CGG + Chr6:41752117-41752136 None:intergenic 55.0%
GGGGTGGAGCGAGTGTAAAA+GGG + Chr6:41752872-41752891 None:intergenic 55.0%
GGGTCAGAACTTCCGTCTGT+GGG - Chr6:41752102-41752121 MsG0680032457.01.T01:intron 55.0%
GGTCAGAACTTCCGTCTGTG+GGG - Chr6:41752103-41752122 MsG0680032457.01.T01:intron 55.0%
GTCAGAACTTCCGTCTGTGG+GGG - Chr6:41752104-41752123 MsG0680032457.01.T01:intron 55.0%
TACCCGAACCTGTTAGGGAC+GGG - Chr6:41750584-41750603 MsG0680032457.01.T01:intron 55.0%
TAGTTCGGGTGGGTAACCAC+GGG + Chr6:41750199-41750218 None:intergenic 55.0%
TCATCCCGTTGGGTATGGGT+AGG - Chr6:41750622-41750641 MsG0680032457.01.T01:intron 55.0%
TCCCAAGTTCTTGTGCTCGC+TGG - Chr6:41751898-41751917 MsG0680032457.01.T01:intron 55.0%
TCGATATGCTTAGCCCGAGC+AGG + Chr6:41747892-41747911 None:intergenic 55.0%
TGACAATCGGGTATGGGGAC+GGG - Chr6:41750661-41750680 MsG0680032457.01.T01:intron 55.0%
TGATCCGGTGGGTCTCTGAT+GGG - Chr6:41751801-41751820 MsG0680032457.01.T01:intron 55.0%
TGGGGTGGAGCGAGTGTAAA+AGG + Chr6:41752873-41752892 None:intergenic 55.0%
TGGGTCAGAACTTCCGTCTG+TGG - Chr6:41752101-41752120 MsG0680032457.01.T01:intron 55.0%
TGTGCTCTCGCATTCGATGG+TGG - Chr6:41751826-41751845 MsG0680032457.01.T01:intron 55.0%
TTCAATGTGGGGACGGGGAT+GGG - Chr6:41750554-41750573 MsG0680032457.01.T01:intron 55.0%
TTGATCCGGTGGGTCTCTGA+TGG - Chr6:41751800-41751819 MsG0680032457.01.T01:intron 55.0%
! TCGCATTCGATGGTGGCTGA+AGG - Chr6:41751833-41751852 MsG0680032457.01.T01:intron 55.0%
!! GACGGGTTCCCCGTTTTGAT+TGG - Chr6:41750229-41750248 MsG0680032457.01.T01:intron 55.0%
!! GGGACGGGTAACGGGTATAT+AGG - Chr6:41750297-41750316 MsG0680032457.01.T01:intron 55.0%
AACCAAGCCGGGCCTGCAAA+AGG - Chr6:41752329-41752348 MsG0680032457.01.T01:intron 60.0%
ACCCCGTCCCTAACAGGTTC+GGG + Chr6:41750589-41750608 None:intergenic 60.0%
ACCCGAACCTGTTAGGGACG+GGG - Chr6:41750585-41750604 MsG0680032457.01.T01:intron 60.0%
ACCTGTTAGGGACGGGGTTG+GGG - Chr6:41750591-41750610 MsG0680032457.01.T01:intron 60.0%
ACGGGTATGGGACGGGTAAC+GGG - Chr6:41750289-41750308 MsG0680032457.01.T01:intron 60.0%
ACTAGGCATGGCAATGGGGC+GGG + Chr6:41750708-41750727 None:intergenic 60.0%
AGCCGGGCCTGCAAAAGGTA+TGG - Chr6:41752334-41752353 MsG0680032457.01.T01:intron 60.0%
CAAGCCCATCAGAGACCCAC+CGG + Chr6:41751808-41751827 None:intergenic 60.0%
CACGGGTATGGGACGGGTAA+CGG - Chr6:41750288-41750307 MsG0680032457.01.T01:intron 60.0%
GAACCTGTTAGGGACGGGGT+TGG - Chr6:41750589-41750608 MsG0680032457.01.T01:intron 60.0%
GACAATCGGGTATGGGGACG+GGG - Chr6:41750662-41750681 MsG0680032457.01.T01:intron 60.0%
GCATGCTGCTCAACCAAGCC+GGG - Chr6:41752318-41752337 MsG0680032457.01.T01:intron 60.0%
GGCATGCTGCTCAACCAAGC+CGG - Chr6:41752317-41752336 MsG0680032457.01.T01:intron 60.0%
TCAATGTGGGGACGGGGATG+GGG - Chr6:41750555-41750574 MsG0680032457.01.T01:intron 60.0%
TCGCTCCACCCCATGTCACT+AGG - Chr6:41752880-41752899 MsG0680032457.01.T01:intron 60.0%
TGTGCAGTCGTCATCAGGCC+CGG - Chr6:41752283-41752302 MsG0680032457.01.T01:intron 60.0%
! CCCGTCCCATACCCGTGTTT+TGG + Chr6:41750285-41750304 None:intergenic 60.0%
! GCCCATACCTTTTGCAGGCC+CGG + Chr6:41752339-41752358 None:intergenic 60.0%
! GCCGGGCCTGCAAAAGGTAT+GGG - Chr6:41752335-41752354 MsG0680032457.01.T01:intron 60.0%
! TACCTTTTGCAGGCCCGGCT+TGG + Chr6:41752334-41752353 None:intergenic 60.0%
ACCCCAACCCCGTCCCTAAC+AGG + Chr6:41750595-41750614 None:intergenic 65.0%
AGCATGCCCACCCTCAAGGC+CGG + Chr6:41752305-41752324 None:intergenic 65.0%
AGGGAGGTAGGGGAGGATGG+TGG + Chr6:41751672-41751691 None:intergenic 65.0%
CTAGGCATGGCAATGGGGCG+GGG + Chr6:41750707-41750726 None:intergenic 65.0%
GAGCAGCATGCCCACCCTCA+AGG + Chr6:41752309-41752328 None:intergenic 65.0%
GGGGGTTGAGGTGAAGCCGA+GGG + Chr6:41751770-41751789 None:intergenic 65.0%
GGTTGAGGTGAAGCCGAGGG+TGG + Chr6:41751767-41751786 None:intergenic 65.0%
GTCATCAGGCCCGGCCTTGA+GGG - Chr6:41752292-41752311 MsG0680032457.01.T01:intron 65.0%
ATCAGGCCCGGCCTTGAGGG+TGG - Chr6:41752295-41752314 MsG0680032457.01.T01:intron 70.0%
CATGGCAATGGGGCGGGGTG+GGG + Chr6:41750702-41750721 None:intergenic 70.0%
CGGGGGTTGAGGTGAAGCCG+AGG + Chr6:41751771-41751790 None:intergenic 70.0%
CGTCATCAGGCCCGGCCTTG+AGG - Chr6:41752291-41752310 MsG0680032457.01.T01:intron 70.0%
GCATGCCCACCCTCAAGGCC+GGG + Chr6:41752304-41752323 None:intergenic 70.0%
GCATGGCAATGGGGCGGGGT+GGG + Chr6:41750703-41750722 None:intergenic 70.0%
TCAGGCCCGGCCTTGAGGGT+GGG - Chr6:41752296-41752315 MsG0680032457.01.T01:intron 70.0%
CAATGGGGCGGGGTGGGGAC+GGG + Chr6:41750697-41750716 None:intergenic 75.0%
GCAATGGGGCGGGGTGGGGA+CGG + Chr6:41750698-41750717 None:intergenic 75.0%
GGCATGGCAATGGGGCGGGG+TGG + Chr6:41750704-41750723 None:intergenic 75.0%
GTGGGGACGGGGATGGGGCA+GGG - Chr6:41750560-41750579 MsG0680032457.01.T01:intron 75.0%
TGTGGGGACGGGGATGGGGC+AGG - Chr6:41750559-41750578 MsG0680032457.01.T01:intron 75.0%
Chromosome Type Strat End Strand Name
Chr6 gene 41747745 41753780 41747745 ID=MsG0680032457.01;Name=MsG0680032457.01
Chr6 mRNA 41747745 41753780 41747745 ID=MsG0680032457.01.T01;Parent=MsG0680032457.01;Name=MsG0680032457.01.T01;_AED=0.83;_eAED=0.83;_QI=0|0|0|0.16|1|1|6|0|237
Chr6 exon 41753605 41753780 41753605 ID=MsG0680032457.01.T01:exon:22563;Parent=MsG0680032457.01.T01
Chr6 exon 41751913 41752034 41751913 ID=MsG0680032457.01.T01:exon:22562;Parent=MsG0680032457.01.T01
Chr6 exon 41750892 41750944 41750892 ID=MsG0680032457.01.T01:exon:22561;Parent=MsG0680032457.01.T01
Chr6 exon 41749342 41749441 41749342 ID=MsG0680032457.01.T01:exon:22560;Parent=MsG0680032457.01.T01
Chr6 exon 41749175 41749235 41749175 ID=MsG0680032457.01.T01:exon:22559;Parent=MsG0680032457.01.T01
Chr6 exon 41747745 41747946 41747745 ID=MsG0680032457.01.T01:exon:22558;Parent=MsG0680032457.01.T01
Chr6 CDS 41753605 41753780 41753605 ID=MsG0680032457.01.T01:cds;Parent=MsG0680032457.01.T01
Chr6 CDS 41751913 41752034 41751913 ID=MsG0680032457.01.T01:cds;Parent=MsG0680032457.01.T01
Chr6 CDS 41750892 41750944 41750892 ID=MsG0680032457.01.T01:cds;Parent=MsG0680032457.01.T01
Chr6 CDS 41749342 41749441 41749342 ID=MsG0680032457.01.T01:cds;Parent=MsG0680032457.01.T01
Chr6 CDS 41749175 41749235 41749175 ID=MsG0680032457.01.T01:cds;Parent=MsG0680032457.01.T01
Chr6 CDS 41747745 41747946 41747745 ID=MsG0680032457.01.T01:cds;Parent=MsG0680032457.01.T01
Gene Sequence

>MsG0680032457.01.T01

ATGGAACAACTTTTTGAGGAAGATGAAGATGAAGACGGAGAGAACTCATGTGGTGCATGCGGTGAGCAATATGACCCTGATAAATTCTGTATTTTCTGTGACATTTGTGAGAGGTGGTTCCATGGGAAATGTGTGAATATCACCCCTGCTCGGGCTAAGCATATCGATATATACAAATGCATTGATGGTGCATCTAGTTGTTGCACGACTCATCGTTCCAAGCATAGAGATCGCAAAGAGAGCTGCTCTTGGTTACATCGGAGTTGTGGGATTGATAAAGTTGGGTTGTTGAAAGTACGGATACCCGAACCTGTTAGGGACGGGGTTGGGGTTCAATTCTCATCCCGTTGGTTTCAACATATTGTTTTTGGGTCAGAACTTCCGTCTGTGGGGGCTTCAATTCCTTCTGCTTTTGTGGATGTGTTGCTTCGTGATGTAACTAATGTTGGTGTCGTCATCAGGCCCGGCCTTGAGGGTGGGCATGCTGCTCAACCAAGCCGGGCCTGCAAAAGACAGGAACAAGGTTTAAATCATACCAAGAATCAAGAAATCAAAGGACATTTGAATTCAAGATCTAACACTGAGATCAGAAAGTTAGATCAGAATGTTGCTCAGAGATCAGAATGTTCGCACAAGAGATCAGAAGGTTGCTTCTATACAAGCCCAGAATCTCAAGAACATGGATCAAGGTCATGCAAGGCACATGTGACATAA
Protein sequence

>MsG0680032457.01.T01

MEQLFEEDEDEDGENSCGACGEQYDPDKFCIFCDICERWFHGKCVNITPARAKHIDIYKCIDGASSCCTTHRSKHRDRKESCSWLHRSCGIDKVGLLKVRIPEPVRDGVGVQFSSRWFQHIVFGSELPSVGASIPSAFVDVLLRDVTNVGVVIRPGLEGGHAAQPSRACKRQEQGLNHTKNQEIKGHLNSRSNTEIRKLDQNVAQRSECSHKRSEGCFYTSPESQEHGSRSCKAHVT*