AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680033616.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033616.01.T01 MTR_0020s0100 80.240 749 81 8 62 805 13 699 0.0 1170
MsG0680033616.01.T01 MTR_5g047620 71.288 815 163 10 30 803 2 786 0.0 1108
MsG0680033616.01.T01 MTR_1g069565 67.291 694 182 9 125 803 207 870 0.0 927
MsG0680033616.01.T01 MTR_1g114150 67.595 682 168 10 126 803 407 1039 0.0 916
MsG0680033616.01.T01 MTR_1g114130 66.618 683 179 8 125 803 390 1027 0.0 908
MsG0680033616.01.T01 MTR_1g069565 60.186 751 197 11 125 803 207 927 0.0 860
MsG0680033616.01.T01 MTR_5g065200 63.934 671 175 10 130 796 209 816 0.0 815
MsG0680033616.01.T01 MTR_1g114070 61.584 682 201 11 126 803 289 913 0.0 806
MsG0680033616.01.T01 MTR_1g114150 64.605 582 153 10 126 703 407 939 0.0 741
MsG0680033616.01.T01 MTR_2g024270 44.298 684 282 18 122 796 208 801 1.91e-162 497
MsG0680033616.01.T01 MTR_7g117445 41.403 727 330 20 144 803 218 915 1.78e-158 490
MsG0680033616.01.T01 MTR_7g117445 41.403 727 330 20 144 803 218 915 3.11e-158 489
MsG0680033616.01.T01 MTR_7g117445 41.403 727 330 20 144 803 218 915 5.19e-158 490
MsG0680033616.01.T01 MTR_2g024140 42.795 694 280 21 122 803 88 676 2.33e-149 458
MsG0680033616.01.T01 MTR_7g117445 39.882 677 311 20 144 753 218 865 1.81e-137 433
MsG0680033616.01.T01 MTR_4g132540 52.723 404 176 7 404 796 449 848 3.87e-129 411
MsG0680033616.01.T01 MTR_4g132540 37.113 194 104 6 132 321 235 414 6.07e-30 128
MsG0680033616.01.T01 MTR_1g083120 32.948 692 383 16 139 816 272 896 4.08e-106 351
MsG0680033616.01.T01 MTR_1g083120 32.948 692 383 16 139 816 289 913 6.29e-106 351
MsG0680033616.01.T01 MTR_2g011630 32.429 700 400 19 144 808 45 706 4.83e-96 319
MsG0680033616.01.T01 MTR_2g011630 32.429 700 400 19 144 808 77 738 3.52e-95 317
MsG0680033616.01.T01 MTR_2g024240 51.258 318 105 6 461 774 114 385 2.32e-94 304
MsG0680033616.01.T01 MTR_2g011630 32.429 700 400 19 144 808 289 950 7.95e-94 318
MsG0680033616.01.T01 MTR_1g008060 41.841 478 219 12 136 605 931 1357 6.16e-92 321
MsG0680033616.01.T01 MTR_1g008060 61.818 165 62 1 644 808 1519 1682 2.12e-55 210
MsG0680033616.01.T01 MTR_1g083120 32.222 630 347 15 139 755 272 834 6.17e-92 311
MsG0680033616.01.T01 MTR_1g083120 32.222 630 347 15 139 755 272 834 7.08e-92 311
MsG0680033616.01.T01 MTR_1g008060 41.841 478 219 12 136 605 940 1366 7.42e-92 321
MsG0680033616.01.T01 MTR_1g008060 61.818 165 62 1 644 808 1528 1691 2.19e-55 210
MsG0680033616.01.T01 MTR_4g091520 34.464 560 292 18 286 796 727 1260 8.63e-82 289
MsG0680033616.01.T01 MTR_4g091520 41.250 80 46 1 144 223 347 425 3.23e-12 71.2
MsG0680033616.01.T01 MTR_8g062940 45.846 325 122 7 125 449 96 366 3.27e-75 251
MsG0680033616.01.T01 MTR_4g091520 31.365 491 262 18 286 727 657 1121 3.70e-53 202
MsG0680033616.01.T01 MTR_4g091520 41.250 80 46 1 144 223 347 425 3.48e-12 71.2
MsG0680033616.01.T01 MTR_4g091520 31.365 491 262 18 286 727 692 1156 3.75e-53 202
MsG0680033616.01.T01 MTR_4g091520 41.250 80 46 1 144 223 347 425 3.20e-12 71.2
MsG0680033616.01.T01 MTR_4g091520 31.161 491 263 18 286 727 727 1191 2.75e-52 200
MsG0680033616.01.T01 MTR_4g091520 41.250 80 46 1 144 223 347 425 3.40e-12 71.2
MsG0680033616.01.T01 MTR_0295s0020 54.217 166 72 2 452 613 12 177 2.19e-48 170
MsG0680033616.01.T01 MTR_8g465700 50.568 176 78 5 398 569 7 177 1.24e-45 166
MsG0680033616.01.T01 MTR_8g013920 55.307 179 51 4 486 661 40 192 1.06e-41 151
MsG0680033616.01.T01 MTR_8g465720 75.000 88 21 1 668 755 53 139 1.90e-41 149
MsG0680033616.01.T01 MTR_7g022910 55.844 77 34 0 802 878 181 257 8.33e-21 93.6
MsG0680033616.01.T01 MTR_3g080750 62.500 64 24 0 568 631 85 148 9.61e-17 78.6
MsG0680033616.01.T01 MTR_2g461230 58.182 55 23 0 802 856 1 55 4.22e-16 75.1
MsG0680033616.01.T01 MTR_7g024960 58.730 63 21 1 827 889 1 58 5.07e-14 70.5
MsG0680033616.01.T01 MTR_7g056303 70.455 44 13 0 827 870 1 44 3.99e-13 65.5
MsG0680033616.01.T01 MTR_2g075400 36.885 122 54 2 827 948 377 475 2.57e-12 70.9
MsG0680033616.01.T01 MTR_7g034340 60.784 51 20 0 846 896 4 54 8.43e-12 62.0
MsG0680033616.01.T01 MTR_1g024145 38.824 85 52 0 840 924 1 85 6.08e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680033616.01.T01 AT1G62310 46.235 664 276 18 143 797 288 879 1.08e-178 541
MsG0680033616.01.T01 AT1G11950 44.378 667 286 14 143 803 272 859 8.37e-174 528
MsG0680033616.01.T01 AT1G11950 44.378 667 286 14 143 803 272 859 8.37e-174 528
MsG0680033616.01.T01 AT4G00990 41.725 719 334 18 128 803 144 820 8.55e-159 488
MsG0680033616.01.T01 AT3G07610 49.714 525 196 11 276 796 415 875 4.20e-152 476
MsG0680033616.01.T01 AT3G07610 42.105 133 71 2 122 249 209 340 2.17e-24 110
MsG0680033616.01.T01 AT3G07610 47.243 544 203 11 276 796 415 897 3.26e-145 459
MsG0680033616.01.T01 AT3G07610 42.105 133 71 2 122 249 209 340 2.11e-24 110
MsG0680033616.01.T01 AT1G11950 42.036 609 268 14 143 745 272 801 7.19e-143 445
MsG0680033616.01.T01 AT4G00990 40.177 677 320 18 128 761 144 778 9.97e-139 434
MsG0680033616.01.T01 AT4G00990 40.508 669 313 18 128 753 144 770 1.05e-137 431
MsG0680033616.01.T01 AT1G09060 31.044 699 377 23 139 816 295 909 5.75e-81 282
MsG0680033616.01.T01 AT1G09060 31.044 699 377 23 139 816 295 909 5.75e-81 282
MsG0680033616.01.T01 AT1G09060 31.044 699 377 23 139 816 281 895 5.82e-81 282
MsG0680033616.01.T01 AT1G09060 31.044 699 377 23 139 816 281 895 5.82e-81 282
MsG0680033616.01.T01 AT3G07610 46.926 309 132 8 271 575 410 690 3.20e-71 251
MsG0680033616.01.T01 AT3G07610 42.105 133 71 2 122 249 209 340 5.16e-24 108
MsG0680033616.01.T01 AT4G21430 36.259 433 252 13 378 801 484 901 5.42e-67 242

Find 180 sgRNAs with CRISPR-Local

Find 429 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTCTTGATGGGAATAAT+TGG 0.211946 6:-69535104 MsG0680033616.01.T01:CDS
TGATCTAATTCTCTTAAATA+TGG 0.219846 6:+69541707 None:intergenic
ATCGACTTTACCTGCTTTAT+AGG 0.238576 6:+69538817 None:intergenic
TTCAGATATTCATTCAATTT+AGG 0.248120 6:+69538877 None:intergenic
TTACATTCATTATTAGCTTT+TGG 0.259405 6:+69540800 None:intergenic
AAAGACCAAAGAGAAGAAAA+AGG 0.261221 6:-69542070 MsG0680033616.01.T01:CDS
ATATCATCTTCCTTCTTAAC+AGG 0.276535 6:+69540638 None:intergenic
AGTACGTTGCTGACAATTAC+AGG 0.277570 6:+69540428 None:intergenic
AGCATGAGATTCAATTTCTA+TGG 0.285636 6:+69540895 None:intergenic
CTCTTTATCTTCAAGTTTAA+CGG 0.287927 6:+69540694 None:intergenic
AAGTGAAGTTTCAGTCATTA+AGG 0.289542 6:-69534813 MsG0680033616.01.T01:CDS
CTTCGTCGTGGGGAGCTTCT+AGG 0.301830 6:-69540998 MsG0680033616.01.T01:CDS
ATTCACTACAGATTGCAATT+TGG 0.308126 6:+69534735 None:intergenic
AATGTGAACGATTTCTTTAC+CGG 0.331440 6:-69540136 MsG0680033616.01.T01:CDS
AGGCAATTGATTGCTTAAAT+TGG 0.335529 6:-69540307 MsG0680033616.01.T01:CDS
ATGATTGTTAGTGAGATAAA+AGG 0.342261 6:+69538630 None:intergenic
CTCAATGTCATGATCATTGT+TGG 0.344575 6:+69541760 None:intergenic
AGTCCCATCTGAACATTATC+AGG 0.349044 6:+69539935 None:intergenic
ACCAACTCAGAGATGCAATT+TGG 0.349840 6:+69540743 None:intergenic
ATGGCCAACAATGTAGGTTT+TGG 0.351758 6:-69535138 MsG0680033616.01.T01:CDS
TCTGTGGAACAGTGATTTAC+TGG 0.354305 6:+69537726 None:intergenic
GATGGTAGAGATTCAGTATC+TGG 0.359930 6:-69542355 MsG0680033616.01.T01:CDS
AGTGATTTACTGGAAGTTTA+CGG 0.362091 6:+69537736 None:intergenic
CTAGTCCATGGCTTCGTTGA+AGG 0.367357 6:-69542377 None:intergenic
ATTCATGAATGGTCAAAATC+TGG 0.368446 6:-69540857 MsG0680033616.01.T01:CDS
AAGAGGCTTAAGGAGGAGTA+TGG 0.378678 6:-69538604 MsG0680033616.01.T01:intron
CAAGACAAGAGGGAGCTTCT+TGG 0.383277 6:-69539120 MsG0680033616.01.T01:CDS
GTTTCTTCTTCTTTGTCGCT+AGG 0.385304 6:+69542317 None:intergenic
CCTGCCGTTTAAAGAATATA+CGG 0.386381 6:-69539996 MsG0680033616.01.T01:CDS
AGAAGCATTTCAGAGAGTTC+AGG 0.389778 6:-69538855 MsG0680033616.01.T01:CDS
TTCTTTACCGGGTACACAAA+TGG 0.390751 6:-69540124 MsG0680033616.01.T01:CDS
TACTAATCACAATTCAGTTT+CGG 0.391063 6:-69540336 MsG0680033616.01.T01:CDS
TGTACCAAAACCTACATTGT+TGG 0.392140 6:+69535134 None:intergenic
TGCTCATCTGAAGCAGTTAC+GGG 0.392512 6:+69539045 None:intergenic
TTCAATGGCACTGGAGAAAA+GGG 0.397011 6:-69540454 MsG0680033616.01.T01:CDS
TTTCAATGGCACTGGAGAAA+AGG 0.401004 6:-69540455 MsG0680033616.01.T01:CDS
TCTGTGGTAGTCAAATATTA+AGG 0.404685 6:+69541069 None:intergenic
TTGTGCCAAAGAGAAGAAAA+AGG 0.406714 6:-69542107 MsG0680033616.01.T01:CDS
TTAGAGAATGATGAAGAAAC+TGG 0.411838 6:-69542259 MsG0680033616.01.T01:CDS
ACAAATATACTGGTTCTTGA+TGG 0.413539 6:-69535114 MsG0680033616.01.T01:CDS
TTGCTCATCTGAAGCAGTTA+CGG 0.413932 6:+69539044 None:intergenic
GGAGCTTCTTGGTGATAATC+AGG 0.416631 6:-69539109 MsG0680033616.01.T01:CDS
ACACAAATGGTCGCAAAGAT+AGG 0.417742 6:-69540111 MsG0680033616.01.T01:CDS
CTGTTCCACAGAGGACAAAT+TGG 0.419919 6:-69537715 MsG0680033616.01.T01:CDS
TGCAGATCCAGTTGAGTTTG+AGG 0.420901 6:-69540972 MsG0680033616.01.T01:CDS
TTTGACCATTCATGAATCTC+AGG 0.426830 6:+69540863 None:intergenic
AGAGAGTAATGCAGAGAAGA+AGG 0.427096 6:-69542287 MsG0680033616.01.T01:CDS
TTGATAACCTCAAACTCAAC+TGG 0.427926 6:+69540965 None:intergenic
TAAAGAAGCATGGGATATCT+TGG 0.430589 6:-69534869 MsG0680033616.01.T01:CDS
ACCACCTTCCCTGGATCATT+CGG 0.433518 6:+69540560 None:intergenic
ACCACCTTCCCTGGATCATT+CGG 0.438256 6:+69540614 None:intergenic
AGGAAAATCGAGGTAGGAAA+AGG 0.445330 6:-69542153 MsG0680033616.01.T01:CDS
CCGTATATTCTTTAAACGGC+AGG 0.445386 6:+69539996 None:intergenic
CAATCATAAGAAGAGGCTTA+AGG 0.445426 6:-69538614 MsG0680033616.01.T01:CDS
GGATCCGTATATTCTTTAAA+CGG 0.445427 6:+69539992 None:intergenic
GAAACTTGATTGCATGCATA+AGG 0.446384 6:-69542017 MsG0680033616.01.T01:intron
GGTTCTTGATGGGAATAATT+GGG 0.446832 6:-69535103 MsG0680033616.01.T01:CDS
ACAAGTAGTGATAGTGAAGA+AGG 0.451271 6:-69542173 MsG0680033616.01.T01:CDS
AAAGAGGAGACTCTTGATAA+TGG 0.452433 6:-69540677 MsG0680033616.01.T01:CDS
GATGATACACCGAATGATCC+AGG 0.452467 6:-69540569 MsG0680033616.01.T01:CDS
GCTAATAATGAATGTAATCA+TGG 0.455983 6:-69540794 MsG0680033616.01.T01:CDS
GACAAAATCAAGTGCAACCT+TGG 0.456526 6:+69537803 None:intergenic
GGTAGTCAAATATTAAGGTT+TGG 0.456642 6:+69541074 None:intergenic
TGCGCAAGATGTTCTTGAAT+TGG 0.460033 6:-69535046 MsG0680033616.01.T01:CDS
AAAGAAGGAGAAGAAAATGC+TGG 0.464789 6:-69542046 MsG0680033616.01.T01:CDS
GTTCTTGAATTGGTGGAGAA+TGG 0.464947 6:-69535036 MsG0680033616.01.T01:CDS
AAGGTATTTCAGCATATACT+TGG 0.472386 6:+69541733 None:intergenic
GATGATATACCGAATGATCC+AGG 0.476958 6:-69540623 MsG0680033616.01.T01:CDS
GTACTTGAATCAAGCACATC+TGG 0.479758 6:-69540410 MsG0680033616.01.T01:CDS
CACGGATTCGAGTTCCACTT+TGG 0.480355 6:+69539185 None:intergenic
GAGATAGAAGCCAAGATTCA+AGG 0.481462 6:-69541665 MsG0680033616.01.T01:intron
CAAGCACATCTGGTATAAGC+TGG 0.481486 6:-69540400 MsG0680033616.01.T01:CDS
ACCAAATTGCATCTCTGAGT+TGG 0.491046 6:-69540744 MsG0680033616.01.T01:CDS
GACTTGTAGGAATTGAGCCT+TGG 0.491834 6:-69538494 MsG0680033616.01.T01:intron
CGGAGCAGCAGCGGAGACAA+AGG 0.495455 6:+69541023 None:intergenic
TTTCTTCTTCTTTGTCGCTA+GGG 0.496852 6:+69542318 None:intergenic
AAGCTCCCCACGACGAAGCT+CGG 0.497059 6:+69541003 None:intergenic
CTAAAGATCAGTGTGCATAC+TGG 0.497463 6:-69541195 MsG0680033616.01.T01:intron
CGAGTGCTTGCGTTATAAAG+AGG 0.497868 6:-69537763 MsG0680033616.01.T01:CDS
TGATTGCTTAAATTGGTGCC+AGG 0.502959 6:-69540300 MsG0680033616.01.T01:intron
GCTGCTCCGAGCTTCGTCGT+GGG 0.506497 6:-69541009 MsG0680033616.01.T01:CDS
GCACTGATGAAGTCATTGTT+TGG 0.507023 6:-69535069 MsG0680033616.01.T01:CDS
AAATGAAAGTGCACTAGTCA+TGG 0.509200 6:-69539001 MsG0680033616.01.T01:CDS
GCAAAATAGTGTTCGAGTCA+TGG 0.509831 6:-69539025 MsG0680033616.01.T01:CDS
GGTTTCGTGCAAAGCAATCA+TGG 0.510091 6:-69535157 MsG0680033616.01.T01:CDS
TCAAGAACAAATTGCTGAGA+AGG 0.511113 6:-69541687 MsG0680033616.01.T01:CDS
CGTTAAACTTGAAGATAAAG+AGG 0.512697 6:-69540693 MsG0680033616.01.T01:CDS
GAAGCAGTTACGGGAGAAAA+CGG 0.513862 6:+69539054 None:intergenic
CATGCAGATAATCTTGCCCT+TGG 0.516962 6:+69540942 None:intergenic
ATGGAGAGGCCAATGTTGAC+AGG 0.519072 6:-69539086 MsG0680033616.01.T01:CDS
TAAAAGGTCTGATCATGGAT+AGG 0.519693 6:+69538646 None:intergenic
CAAATATACTGGTTCTTGAT+GGG 0.522730 6:-69535113 MsG0680033616.01.T01:CDS
ATTCTCTTAAATATGGAAGA+AGG 0.523817 6:+69541714 None:intergenic
TTCATGAATGGTCAAAATCT+GGG 0.525657 6:-69540856 MsG0680033616.01.T01:CDS
GGGTGGCATGCCGGCAGTGA+TGG 0.529308 6:-69540836 MsG0680033616.01.T01:CDS
GACGAAGCTCGGAGCAGCAG+CGG 0.530073 6:+69541014 None:intergenic
TCAAAATCTGGGTGGCATGC+CGG 0.534124 6:-69540845 MsG0680033616.01.T01:CDS
ACTTGATGAGGACAACCAGC+TGG 0.534166 6:+69538435 None:intergenic
AACAAGATCTAAAGAAGCAT+GGG 0.534907 6:-69534878 MsG0680033616.01.T01:CDS
TAACAAGATCTAAAGAAGCA+TGG 0.535167 6:-69534879 MsG0680033616.01.T01:CDS
TTTGTCTCTCCTGAAAATGT+TGG 0.538770 6:-69537786 MsG0680033616.01.T01:CDS
GCAATCATGGCCAACAATGT+AGG 0.539829 6:-69535144 MsG0680033616.01.T01:CDS
TGAAGAAGGAAAATCGAGGT+AGG 0.540322 6:-69542159 MsG0680033616.01.T01:CDS
GCTCCCTCTTGTCTTGCTCA+AGG 0.541045 6:+69539127 None:intergenic
AGGTTAAGAGCAGCTTTGAA+AGG 0.541086 6:+69539971 None:intergenic
CTAGTCATGGAAAATGAAAG+TGG 0.543959 6:-69538988 MsG0680033616.01.T01:CDS
CTTAATTGCAGTAATACTCA+CGG 0.545152 6:+69539167 None:intergenic
CAATTCAGTTTCGGATGTGA+AGG 0.546118 6:-69540327 MsG0680033616.01.T01:CDS
TGAGATAAAAGGTCTGATCA+TGG 0.546504 6:+69538641 None:intergenic
CTGCTCCGAGCTTCGTCGTG+GGG 0.547255 6:-69541008 MsG0680033616.01.T01:CDS
AACTCAGAGATGCAATTTGG+TGG 0.550293 6:+69540746 None:intergenic
TCCATGGCTTCGTTGAAGGA+TGG 0.552066 6:-69542373 MsG0680033616.01.T01:CDS
ATGGGAATAATTGGGAAAGG+TGG 0.552344 6:-69535095 MsG0680033616.01.T01:CDS
ACCATCCTTCAACGAAGCCA+TGG 0.557903 6:+69542372 None:intergenic
AATGATGAAGAAACTGGTAA+AGG 0.559773 6:-69542253 MsG0680033616.01.T01:CDS
TTTGCGACCATTTGTGTACC+CGG 0.561602 6:+69540117 None:intergenic
CGTATATTCTTTAAACGGCA+GGG 0.561613 6:+69539997 None:intergenic
GTCGCAAAGATAGGCTCGAT+TGG 0.561745 6:-69540102 MsG0680033616.01.T01:CDS
TTCAGATTTCTGACTTGATG+AGG 0.562161 6:+69538423 None:intergenic
GCGGATGCTACCATCACTGC+CGG 0.564083 6:+69540826 None:intergenic
CTATTGCTCTCCTATAAAGC+AGG 0.564329 6:-69538827 MsG0680033616.01.T01:intron
AAAAGGTCTGATCATGGATA+GGG 0.566516 6:+69538647 None:intergenic
TTGATGGGAATAATTGGGAA+AGG 0.567023 6:-69535098 MsG0680033616.01.T01:CDS
TGCTGCTCCGAGCTTCGTCG+TGG 0.568280 6:-69541010 MsG0680033616.01.T01:CDS
TCTTTCAATTTCAATAGTTG+AGG 0.569152 6:+69540079 None:intergenic
TCATCAAGTCAGAAATCTGA+AGG 0.570021 6:-69538421 MsG0680033616.01.T01:intron
GCACCTTGAGCAAGACAAGA+GGG 0.570458 6:-69539130 MsG0680033616.01.T01:CDS
ATCTGTAGTGAATCAGATGA+AGG 0.571277 6:-69534725 MsG0680033616.01.T01:CDS
TCACTAACAATCATAAGAAG+AGG 0.571805 6:-69538621 MsG0680033616.01.T01:CDS
TATCAGGCAGCTTCAAAGCA+AGG 0.573948 6:+69539951 None:intergenic
GCAGAAGAAGAAAGCTTGCA+AGG 0.574480 6:-69534959 MsG0680033616.01.T01:CDS
ATTATCAAGCCTGTCAACAT+TGG 0.580568 6:+69539077 None:intergenic
CTGCCTGATAATGTTCAGAT+GGG 0.580666 6:-69539938 MsG0680033616.01.T01:CDS
CTCAGCCTGAGATTCATGAA+TGG 0.580958 6:-69540868 MsG0680033616.01.T01:CDS
GCTGCCTGATAATGTTCAGA+TGG 0.581979 6:-69539939 MsG0680033616.01.T01:CDS
GAAATATGAGTTGATGCTGA+TGG 0.587320 6:-69534788 MsG0680033616.01.T01:CDS
ATCTTGGCAAAATACTATGA+AGG 0.589180 6:-69534853 MsG0680033616.01.T01:CDS
AGTTTGAGGTTATCAACCAA+GGG 0.590691 6:-69540958 MsG0680033616.01.T01:CDS
AAGCACATCTGGTATAAGCT+GGG 0.598444 6:-69540399 MsG0680033616.01.T01:CDS
AAGTGGATCATGTGATATGA+AGG 0.602990 6:-69538971 MsG0680033616.01.T01:CDS
TACCTCCAATTTGTCCTCTG+TGG 0.606074 6:+69537710 None:intergenic
AGATCTGCAAAATCATGAGA+AGG 0.607799 6:-69540489 MsG0680033616.01.T01:CDS
CGGCAGGGATGATATGAGCT+CGG 0.608155 6:+69540012 None:intergenic
CTTCTTGGTGATAATCAGGA+TGG 0.608495 6:-69539105 MsG0680033616.01.T01:CDS
CAAGGGCAAGATTATCTGCA+TGG 0.609642 6:-69540941 MsG0680033616.01.T01:CDS
ATGTGAACGATTTCTTTACC+GGG 0.609890 6:-69540135 MsG0680033616.01.T01:CDS
TTCCACAGAGGACAAATTGG+AGG 0.610429 6:-69537712 MsG0680033616.01.T01:intron
GCTGGGAACCGCTTGTCATG+TGG 0.613386 6:-69540382 MsG0680033616.01.T01:CDS
AGCTTCTGAACAAAACTCCA+AGG 0.613881 6:+69538477 None:intergenic
ACCGAATGATCCAGGGAAGG+TGG 0.613959 6:-69540615 MsG0680033616.01.T01:CDS
AGCACCTTGAGCAAGACAAG+AGG 0.618569 6:-69539131 MsG0680033616.01.T01:CDS
ACCGAATGATCCAGGGAAGG+TGG 0.620777 6:-69540561 MsG0680033616.01.T01:CDS
ATCACAATGGAGCTTTGTCA+CGG 0.621649 6:+69539862 None:intergenic
GAGTTTGAGGTTATCAACCA+AGG 0.622153 6:-69540959 MsG0680033616.01.T01:CDS
GTTGACTCATATTGCCAAAG+TGG 0.626432 6:-69539199 MsG0680033616.01.T01:CDS
ATGATATACCGAATGATCCA+GGG 0.630601 6:-69540622 MsG0680033616.01.T01:CDS
ATATGAGTTGATGCTGATGG+AGG 0.630837 6:-69534785 MsG0680033616.01.T01:CDS
TGGTGATAATCAGGATGGAG+AGG 0.631154 6:-69539100 MsG0680033616.01.T01:CDS
TGAAGTTTCAGTCATTAAGG+AGG 0.633828 6:-69534810 MsG0680033616.01.T01:CDS
TCATAAGAAGAGGCTTAAGG+AGG 0.634907 6:-69538611 MsG0680033616.01.T01:CDS
ATGATACACCGAATGATCCA+GGG 0.637717 6:-69540568 MsG0680033616.01.T01:CDS
GAGTAATGCAGAGAAGAAGG+AGG 0.638495 6:-69542284 MsG0680033616.01.T01:CDS
TGCTGATGGAGGATGATCAA+AGG 0.641019 6:-69534774 MsG0680033616.01.T01:CDS
ATGATATGAGCTCGGCACAA+TGG 0.653122 6:+69540020 None:intergenic
CGTCGTGGGGAGCTTCTAGG+TGG 0.653994 6:-69540995 MsG0680033616.01.T01:CDS
AATGCATGCCACATGACAAG+CGG 0.654461 6:+69540374 None:intergenic
GCAAGATGTTCTTGAATTGG+TGG 0.654507 6:-69535043 MsG0680033616.01.T01:CDS
TGGATCATGTGATATGAAGG+TGG 0.679236 6:-69538968 MsG0680033616.01.T01:CDS
TCAATGGCACTGGAGAAAAG+GGG 0.683003 6:-69540453 MsG0680033616.01.T01:CDS
TTCATGAATCTCAGGCTGAG+CGG 0.683492 6:+69540871 None:intergenic
ATGAGCTCGGCACAATGGTG+TGG 0.685553 6:+69540025 None:intergenic
TACACCGAATGATCCAGGGA+AGG 0.698185 6:-69540564 MsG0680033616.01.T01:CDS
GGGCAAGATTATCTGCATGG+TGG 0.704928 6:-69540938 MsG0680033616.01.T01:CDS
ATAGTGAAGAAGGAAAATCG+AGG 0.708394 6:-69542163 MsG0680033616.01.T01:CDS
TATACCGAATGATCCAGGGA+AGG 0.716500 6:-69540618 MsG0680033616.01.T01:CDS
TGTGTTGCAGTCATGCACCA+AGG 0.722509 6:-69537820 MsG0680033616.01.T01:intron
GCGACAAAGAAGAAGAAACG+TGG 0.724000 6:-69542313 MsG0680033616.01.T01:CDS
ATGAATGGTCAAAATCTGGG+TGG 0.728185 6:-69540853 MsG0680033616.01.T01:CDS
CTACATCAGACATATCACAA+TGG 0.728251 6:+69539849 None:intergenic
AGTAAATCACTGTTCCACAG+AGG 0.760358 6:-69537724 MsG0680033616.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTATTCATAAGTTTATTA+AGG - Chr6:69540573-69540592 MsG0680033616.01.T01:CDS 10.0%
!!! ATAGAATATTTTTTATAACT+TGG + Chr6:69540821-69540840 None:intergenic 10.0%
!! AATTGAGTAACAAATAAATA+AGG - Chr6:69540766-69540785 MsG0680033616.01.T01:CDS 15.0%
!! AATTTAAATTATTGAGCTTA+CGG + Chr6:69540692-69540711 None:intergenic 15.0%
!! ATGTTGAATTGTTAATAAAA+TGG + Chr6:69538572-69538591 None:intergenic 15.0%
!! ATTCACAATATATTATGAAA+AGG + Chr6:69541630-69541649 None:intergenic 15.0%
!!! CGTTTTATCTTTAAATTATT+AGG + Chr6:69537671-69537690 None:intergenic 15.0%
!!! TGATTTTCTTAAATTATTTG+TGG - Chr6:69535642-69535661 MsG0680033616.01.T01:intron 15.0%
!! AAAAAATTAAGACATGTACT+TGG + Chr6:69537388-69537407 None:intergenic 20.0%
!! AAAAAGAAATTATTGCATGA+AGG - Chr6:69540913-69540932 MsG0680033616.01.T01:CDS 20.0%
!! AAAACTAATAAGTATGAGTT+AGG + Chr6:69541478-69541497 None:intergenic 20.0%
!! AAAGAATTATAGTAGATAAG+TGG - Chr6:69541111-69541130 MsG0680033616.01.T01:intron 20.0%
!! ATAAAATTTGACGAAGAATT+TGG - Chr6:69538978-69538997 MsG0680033616.01.T01:CDS 20.0%
!! ATCTAAATGTCTAAATGATA+TGG + Chr6:69539022-69539041 None:intergenic 20.0%
!! ATGATTTCTCAAATTTATTG+AGG - Chr6:69540738-69540757 MsG0680033616.01.T01:CDS 20.0%
!! GAAATACAAACTTAATCAAA+AGG + Chr6:69535794-69535813 None:intergenic 20.0%
!! GATTGAATAACTAATGTATA+TGG + Chr6:69540168-69540187 None:intergenic 20.0%
!! GGTAAAATATGTTTAATTCA+AGG + Chr6:69539682-69539701 None:intergenic 20.0%
!! TCAATTACTGAAAAATTGAT+GGG - Chr6:69539760-69539779 MsG0680033616.01.T01:intron 20.0%
!! TGATCTAATTCTCTTAAATA+TGG + Chr6:69535383-69535402 None:intergenic 20.0%
!! TGATTTCTCAAATTTATTGA+GGG - Chr6:69540739-69540758 MsG0680033616.01.T01:CDS 20.0%
!! TGTTATGCATGTTATTAATA+AGG - Chr6:69535128-69535147 MsG0680033616.01.T01:CDS 20.0%
!! TTCAGATATTCATTCAATTT+AGG + Chr6:69538213-69538232 None:intergenic 20.0%
!!! AAACTTTTCTCAAACAAATT+AGG + Chr6:69537041-69537060 None:intergenic 20.0%
!!! AAGAACTTTTAACAACTAAT+CGG + Chr6:69538838-69538857 None:intergenic 20.0%
!!! AAGTACATGTCTTAATTTTT+TGG - Chr6:69537387-69537406 MsG0680033616.01.T01:intron 20.0%
!!! ACATATAAACCAATTTTCTT+TGG + Chr6:69541010-69541029 None:intergenic 20.0%
!!! AGCTATTGATAACTAAAATA+TGG - Chr6:69538353-69538372 MsG0680033616.01.T01:intron 20.0%
!!! ATTAAGAAATTTTACAAACC+TGG + Chr6:69536808-69536827 None:intergenic 20.0%
!!! ATTGATAACTAAAATATGGT+AGG - Chr6:69538357-69538376 MsG0680033616.01.T01:intron 20.0%
!!! ATTTCTCTTTGAAAAAAGTA+TGG - Chr6:69539827-69539846 MsG0680033616.01.T01:intron 20.0%
!!! CATCAAGAAAATATTTTAGA+TGG - Chr6:69538153-69538172 MsG0680033616.01.T01:intron 20.0%
!!! CATTTTTTTCTTCTTTCTTT+TGG - Chr6:69535728-69535747 MsG0680033616.01.T01:intron 20.0%
!!! GATTGTTTTACATATTTTTG+TGG - Chr6:69537505-69537524 MsG0680033616.01.T01:intron 20.0%
!!! TAATTTGTGTTATGTTTTTC+TGG - Chr6:69539941-69539960 MsG0680033616.01.T01:CDS 20.0%
!!! TGTTTTGTTTCTTTACAATT+TGG - Chr6:69537849-69537868 MsG0680033616.01.T01:intron 20.0%
!!! TTACATTCATTATTAGCTTT+TGG + Chr6:69536290-69536309 None:intergenic 20.0%
!!! TTCTTGAATGACATATATTT+TGG - Chr6:69538401-69538420 MsG0680033616.01.T01:intron 20.0%
!!! TTTTTGCTTATAATAGTGAT+CGG + Chr6:69540092-69540111 None:intergenic 20.0%
! AAAAAAATGATGGCTTGAAA+AGG - Chr6:69540975-69540994 MsG0680033616.01.T01:CDS 25.0%
! AAGTGTATATGTTGAAGTTA+TGG - Chr6:69538751-69538770 MsG0680033616.01.T01:intron 25.0%
! ACTTGGAACTTCATAAATAT+CGG + Chr6:69537472-69537491 None:intergenic 25.0%
! AGATAAGTGGAATGAATATT+TGG - Chr6:69541124-69541143 MsG0680033616.01.T01:intron 25.0%
! AGTATATATACACAATGACT+TGG + Chr6:69541598-69541617 None:intergenic 25.0%
! ATAAGTTGTATCATTCGATA+AGG - Chr6:69537581-69537600 MsG0680033616.01.T01:intron 25.0%
! ATGAGTTGTATCATTAGATA+AGG - Chr6:69537702-69537721 MsG0680033616.01.T01:intron 25.0%
! ATGATTGTTAGTGAGATAAA+AGG + Chr6:69538460-69538479 None:intergenic 25.0%
! ATTATGCGATACTGAAAATA+GGG - Chr6:69541162-69541181 MsG0680033616.01.T01:intron 25.0%
! ATTCTCTTAAATATGGAAGA+AGG + Chr6:69535376-69535395 None:intergenic 25.0%
! CAAAAAGAAAAAACTGAAGA+AGG - Chr6:69534890-69534909 MsG0680033616.01.T01:CDS 25.0%
! CATAGTAATAACATCTTTGA+GGG + Chr6:69535156-69535175 None:intergenic 25.0%
! GCTAATAATGAATGTAATCA+TGG - Chr6:69536293-69536312 MsG0680033616.01.T01:intron 25.0%
! GGAATGTTTAAATGAGAATA+TGG + Chr6:69538928-69538947 None:intergenic 25.0%
! GTCAATTACTGAAAAATTGA+TGG - Chr6:69539759-69539778 MsG0680033616.01.T01:intron 25.0%
! GTTCTGATATCTTAGTATTT+GGG - Chr6:69539090-69539109 MsG0680033616.01.T01:CDS 25.0%
! TACTAATCACAATTCAGTTT+CGG - Chr6:69536751-69536770 MsG0680033616.01.T01:intron 25.0%
! TCATAGTAATAACATCTTTG+AGG + Chr6:69535157-69535176 None:intergenic 25.0%
! TCATGTCTATAGATTCTTAT+TGG - Chr6:69539918-69539937 MsG0680033616.01.T01:CDS 25.0%
! TCTCATTTAAACATTCCTAA+AGG - Chr6:69538931-69538950 MsG0680033616.01.T01:CDS 25.0%
! TCTTAAATTATTTGTGGTGT+CGG - Chr6:69535648-69535667 MsG0680033616.01.T01:intron 25.0%
! TCTTTCAATTTCAATAGTTG+AGG + Chr6:69537011-69537030 None:intergenic 25.0%
! TGGATTTCAGATTAAAGAAA+AGG - Chr6:69538771-69538790 MsG0680033616.01.T01:intron 25.0%
! TGTACAAGTATACAACTATT+AGG + Chr6:69538902-69538921 None:intergenic 25.0%
!! AAAACTTTTTATACTGTCCT+AGG - Chr6:69536570-69536589 MsG0680033616.01.T01:intron 25.0%
!! AAACTTTTTATACTGTCCTA+GGG - Chr6:69536571-69536590 MsG0680033616.01.T01:intron 25.0%
!! ACAGTATAAAAAGTTTTCAC+CGG + Chr6:69536567-69536586 None:intergenic 25.0%
!! AGCGATATTTCTATAAAGAA+TGG - Chr6:69541041-69541060 MsG0680033616.01.T01:CDS 25.0%
!! AGTTCTGATATCTTAGTATT+TGG - Chr6:69539089-69539108 MsG0680033616.01.T01:CDS 25.0%
!! ATAAATCTTTTGATGCTTAG+AGG - Chr6:69537308-69537327 MsG0680033616.01.T01:intron 25.0%
!! ATAATTTTTCGTACGTTGTT+TGG - Chr6:69538518-69538537 MsG0680033616.01.T01:intron 25.0%
!! CTCTTTATCTTCAAGTTTAA+CGG + Chr6:69536396-69536415 None:intergenic 25.0%
!! CTTACTACATATTTTGCTTA+TGG - Chr6:69537173-69537192 MsG0680033616.01.T01:intron 25.0%
!! TCACTTGCTAATTATAATGA+TGG + Chr6:69541513-69541532 None:intergenic 25.0%
!! TTTTCCCTCAAAAAAAATGA+TGG - Chr6:69540965-69540984 MsG0680033616.01.T01:CDS 25.0%
!!! AAAGGTGTAAATTTTCCATA+AGG - Chr6:69538728-69538747 MsG0680033616.01.T01:intron 25.0%
!!! AGACTTTAGTTTTGTTTTGT+TGG - Chr6:69541536-69541555 MsG0680033616.01.T01:intron 25.0%
!!! AGGATTTAAGACATTTTCAA+TGG - Chr6:69536618-69536637 MsG0680033616.01.T01:intron 25.0%
!!! ATAACTATTGAAGTTTGTTG+TGG + Chr6:69541209-69541228 None:intergenic 25.0%
!!! GACATATATTTTGGTAATGT+AGG - Chr6:69538410-69538429 MsG0680033616.01.T01:intron 25.0%
!!! TACATATTTTTGTGGTGTTT+TGG - Chr6:69537513-69537532 MsG0680033616.01.T01:intron 25.0%
!!! TAGCATACTTTTGTTTCTTT+AGG - Chr6:69540227-69540246 MsG0680033616.01.T01:intron 25.0%
!!! TATGTAATTTGTTCTATCTG+TGG - Chr6:69540404-69540423 MsG0680033616.01.T01:CDS 25.0%
!!! TCATTAGATAAGGTACTTTT+TGG - Chr6:69537712-69537731 MsG0680033616.01.T01:intron 25.0%
!!! TCATTCGATAAGGTATTTTT+TGG - Chr6:69537591-69537610 MsG0680033616.01.T01:intron 25.0%
!!! TCTTTACAATTTGGCTTTTT+AGG - Chr6:69537858-69537877 MsG0680033616.01.T01:intron 25.0%
!!! TCTTTTTAAGTTGCTTAGTA+AGG - Chr6:69540338-69540357 MsG0680033616.01.T01:CDS 25.0%
!!! TTAATGTTTTAAGTGCATCT+TGG - Chr6:69539147-69539166 MsG0680033616.01.T01:CDS 25.0%
AAAGACCAAAGAGAAGAAAA+AGG - Chr6:69535017-69535036 MsG0680033616.01.T01:CDS 30.0%
AAGTGAAGTTTCAGTCATTA+AGG - Chr6:69542274-69542293 MsG0680033616.01.T01:CDS 30.0%
AATCAACAACCAAATGAACT+TGG + Chr6:69537489-69537508 None:intergenic 30.0%
AATCTATAGACATGACATGA+TGG + Chr6:69539913-69539932 None:intergenic 30.0%
AATGATGAAGAAACTGGTAA+AGG - Chr6:69534834-69534853 MsG0680033616.01.T01:CDS 30.0%
AATGTGAACGATTTCTTTAC+CGG - Chr6:69536951-69536970 MsG0680033616.01.T01:intron 30.0%
ACTGAAAAATTGATGGGAAT+AGG - Chr6:69539766-69539785 MsG0680033616.01.T01:intron 30.0%
ACTTGGAACTTCATAATTGT+CGG + Chr6:69537371-69537390 None:intergenic 30.0%
ACTTGGTATGATTTGATACT+TGG + Chr6:69540804-69540823 None:intergenic 30.0%
AGAGAAGAAAAAGGAAAAGA+AGG - Chr6:69535026-69535045 MsG0680033616.01.T01:CDS 30.0%
AGCATGAGATTCAATTTCTA+TGG + Chr6:69536195-69536214 None:intergenic 30.0%
AGGCAATTGATTGCTTAAAT+TGG - Chr6:69536780-69536799 MsG0680033616.01.T01:intron 30.0%
AGTGATTTACTGGAAGTTTA+CGG + Chr6:69539354-69539373 None:intergenic 30.0%
ATATCATCTTCCTTCTTAAC+AGG + Chr6:69536452-69536471 None:intergenic 30.0%
ATCTTGGCAAAATACTATGA+AGG - Chr6:69542234-69542253 MsG0680033616.01.T01:CDS 30.0%
ATGTAGAACACAGAAAACAA+AGG + Chr6:69535247-69535266 None:intergenic 30.0%
ATTATTGCATGAAGGTTCAA+AGG - Chr6:69540921-69540940 MsG0680033616.01.T01:CDS 30.0%
ATTCACTACAGATTGCAATT+TGG + Chr6:69542355-69542374 None:intergenic 30.0%
ATTCATGAATGGTCAAAATC+TGG - Chr6:69536230-69536249 MsG0680033616.01.T01:intron 30.0%
ATTGGTAAAGTGATGGTTAT+AGG - Chr6:69539063-69539082 MsG0680033616.01.T01:CDS 30.0%
CATTTAAACATTCCTAAAGG+AGG - Chr6:69538934-69538953 MsG0680033616.01.T01:CDS 30.0%
CGAAATCGTAACACATTTAT+CGG - Chr6:69539616-69539635 MsG0680033616.01.T01:intron 30.0%
CGTTAAACTTGAAGATAAAG+AGG - Chr6:69536394-69536413 MsG0680033616.01.T01:intron 30.0%
CTTAATTGCAGTAATACTCA+CGG + Chr6:69537923-69537942 None:intergenic 30.0%
GAGAAAACAAGAGAAAATGA+AGG + Chr6:69538333-69538352 None:intergenic 30.0%
GAGCAAAAATAACATTCACA+TGG - Chr6:69541074-69541093 MsG0680033616.01.T01:CDS 30.0%
GATTATGCGATACTGAAAAT+AGG - Chr6:69541161-69541180 MsG0680033616.01.T01:intron 30.0%
GGAAAAAATACCTTGAATCT+TGG + Chr6:69535435-69535454 None:intergenic 30.0%
GGAGAGAATAAATATAACTG+TGG - Chr6:69538792-69538811 MsG0680033616.01.T01:intron 30.0%
GGATCCGTATATTCTTTAAA+CGG + Chr6:69537098-69537117 None:intergenic 30.0%
GGTAGTCAAATATTAAGGTT+TGG + Chr6:69536016-69536035 None:intergenic 30.0%
TAAAAAAGTTGGAGAAAGCA+AGG - Chr6:69540026-69540045 MsG0680033616.01.T01:CDS 30.0%
TAACAAGATCTAAAGAAGCA+TGG - Chr6:69542208-69542227 MsG0680033616.01.T01:CDS 30.0%
TATGAAGTTCCAAGTTCATT+TGG - Chr6:69537477-69537496 MsG0680033616.01.T01:intron 30.0%
TCAACATATACACTTCCTTA+TGG + Chr6:69538746-69538765 None:intergenic 30.0%
TCACTAACAATCATAAGAAG+AGG - Chr6:69538466-69538485 MsG0680033616.01.T01:CDS 30.0%
TCTGTGGTAGTCAAATATTA+AGG + Chr6:69536021-69536040 None:intergenic 30.0%
TGATATCTTAGTATTTGGGT+TGG - Chr6:69539094-69539113 MsG0680033616.01.T01:CDS 30.0%
TTAGAGAATGATGAAGAAAC+TGG - Chr6:69534828-69534847 MsG0680033616.01.T01:CDS 30.0%
TTATGCGATACTGAAAATAG+GGG - Chr6:69541163-69541182 MsG0680033616.01.T01:intron 30.0%
TTATTGCATGAAGGTTCAAA+GGG - Chr6:69540922-69540941 MsG0680033616.01.T01:CDS 30.0%
TTCATGAATGGTCAAAATCT+GGG - Chr6:69536231-69536250 MsG0680033616.01.T01:intron 30.0%
! AACAAGATCTAAAGAAGCAT+GGG - Chr6:69542209-69542228 MsG0680033616.01.T01:CDS 30.0%
! AACACATTTATCGGTTGAAA+TGG - Chr6:69539625-69539644 MsG0680033616.01.T01:intron 30.0%
! AAGGTATTTCAGCATATACT+TGG + Chr6:69535357-69535376 None:intergenic 30.0%
! CTTTTCCTTTTTCTTCTCTT+TGG + Chr6:69535025-69535044 None:intergenic 30.0%
! CTTTTCTCAAACAAATTAGG+AGG + Chr6:69537038-69537057 None:intergenic 30.0%
! GAAGGTAAATTTTACGTACA+TGG - Chr6:69538684-69538703 MsG0680033616.01.T01:intron 30.0%
! TAGTTTCAGAAAGTTGTTTC+AGG + Chr6:69541260-69541279 None:intergenic 30.0%
! TCTCAATCAGGCAATTATTT+TGG + Chr6:69539548-69539567 None:intergenic 30.0%
! TGAGTTGTTGATTAAATGCA+GGG - Chr6:69536921-69536940 MsG0680033616.01.T01:intron 30.0%
! TTGAGTTGTTGATTAAATGC+AGG - Chr6:69536920-69536939 MsG0680033616.01.T01:intron 30.0%
! TTTCTCTGCCTATGTTTTAT+AGG - Chr6:69535491-69535510 MsG0680033616.01.T01:intron 30.0%
! TTTTGCTTATGGATTTTCTG+AGG - Chr6:69537184-69537203 MsG0680033616.01.T01:intron 30.0%
!! ACAAATATACTGGTTCTTGA+TGG - Chr6:69541973-69541992 MsG0680033616.01.T01:intron 30.0%
!! ACAATTCAACATTGACTTGT+AGG - Chr6:69538580-69538599 MsG0680033616.01.T01:intron 30.0%
!! AGGTTTTGGTACAAATATAC+TGG - Chr6:69541963-69541982 MsG0680033616.01.T01:intron 30.0%
!! CAAATATACTGGTTCTTGAT+GGG - Chr6:69541974-69541993 MsG0680033616.01.T01:intron 30.0%
!! CTAAAGGTACCAAAGAAAAT+TGG - Chr6:69540998-69541017 MsG0680033616.01.T01:CDS 30.0%
!! GGTTTTTAAGCATGTTAAGA+AGG - Chr6:69536493-69536512 MsG0680033616.01.T01:intron 30.0%
!!! AATCAGGCAATTATTTTGGT+AGG + Chr6:69539544-69539563 None:intergenic 30.0%
!!! CAAGCCATCATTTTTTTTGA+GGG + Chr6:69540972-69540991 None:intergenic 30.0%
!!! GTATTCTAGACTACTTTTTC+TGG - Chr6:69539397-69539416 MsG0680033616.01.T01:intron 30.0%
!!! TCAAGCCATCATTTTTTTTG+AGG + Chr6:69540973-69540992 None:intergenic 30.0%
!!! TTCAAGGTATTTTTTCCTCA+AGG - Chr6:69535438-69535457 MsG0680033616.01.T01:intron 30.0%
!!! TTGTTTTAAGCCTGTTAAGA+AGG - Chr6:69536439-69536458 MsG0680033616.01.T01:intron 30.0%
!!! TTTTTGCCTCGTTTTTTTCT+TGG + Chr6:69534876-69534895 None:intergenic 30.0%
AAAAGGTCTGATCATGGATA+GGG + Chr6:69538443-69538462 None:intergenic 35.0%
AAACACGAGAGATATTGTGA+GGG - Chr6:69541865-69541884 MsG0680033616.01.T01:intron 35.0%
AAAGAAGGAGAAGAAAATGC+TGG - Chr6:69535041-69535060 MsG0680033616.01.T01:CDS 35.0%
AAAGAGGAGACTCTTGATAA+TGG - Chr6:69536410-69536429 MsG0680033616.01.T01:intron 35.0%
AAGTGGATCATGTGATATGA+AGG - Chr6:69538116-69538135 MsG0680033616.01.T01:intron 35.0%
ACATAAAAGTGATGAGCTAG+TGG + Chr6:69539182-69539201 None:intergenic 35.0%
ACTGAAATTAGGGTTTCCAA+TGG + Chr6:69541774-69541793 None:intergenic 35.0%
AGACCTGTAAATTGAATGGT+AGG + Chr6:69540265-69540284 None:intergenic 35.0%
AGAGAAGAAAAAGGTGAAGA+AGG - Chr6:69534989-69535008 MsG0680033616.01.T01:CDS 35.0%
AGATCTGCAAAATCATGAGA+AGG - Chr6:69536598-69536617 MsG0680033616.01.T01:intron 35.0%
AGTGAAGTGTGAAGATTCAT+AGG - Chr6:69541909-69541928 MsG0680033616.01.T01:intron 35.0%
AGTGTGCTTAATACTTGTGA+TGG - Chr6:69540463-69540482 MsG0680033616.01.T01:CDS 35.0%
ATAGTGAAGAAGGAAAATCG+AGG - Chr6:69534924-69534943 MsG0680033616.01.T01:CDS 35.0%
ATCTGTAGTGAATCAGATGA+AGG - Chr6:69542362-69542381 MsG0680033616.01.T01:CDS 35.0%
ATGATATACCGAATGATCCA+GGG - Chr6:69536465-69536484 MsG0680033616.01.T01:intron 35.0%
ATGTGAACGATTTCTTTACC+GGG - Chr6:69536952-69536971 MsG0680033616.01.T01:intron 35.0%
ATTATCAAGCCTGTCAACAT+TGG + Chr6:69538013-69538032 None:intergenic 35.0%
ATTGAATAACTGACGTGTGT+CGG - Chr6:69540128-69540147 MsG0680033616.01.T01:CDS 35.0%
CAATCATAAGAAGAGGCTTA+AGG - Chr6:69538473-69538492 MsG0680033616.01.T01:CDS 35.0%
CAGTATACTACACCTATTGT+TGG - Chr6:69539573-69539592 MsG0680033616.01.T01:intron 35.0%
CGTATATTCTTTAAACGGCA+GGG + Chr6:69537093-69537112 None:intergenic 35.0%
CTACATCAGACATATCACAA+TGG + Chr6:69537241-69537260 None:intergenic 35.0%
CTAGTCATGGAAAATGAAAG+TGG - Chr6:69538099-69538118 MsG0680033616.01.T01:intron 35.0%
CTCAATGTCATGATCATTGT+TGG + Chr6:69535330-69535349 None:intergenic 35.0%
CTTGTGATGGTTAGGTTTAT+CGG - Chr6:69540476-69540495 MsG0680033616.01.T01:CDS 35.0%
GAAACTTGATTGCATGCATA+AGG - Chr6:69535070-69535089 MsG0680033616.01.T01:CDS 35.0%
GATGTGTACAATGTCTTTGT+AGG - Chr6:69537330-69537349 MsG0680033616.01.T01:intron 35.0%
GCATGTAGAAGACTAATTCA+AGG + Chr6:69541420-69541439 None:intergenic 35.0%
GCCAAGTTCTTAAAAGTTTG+AGG - Chr6:69538872-69538891 MsG0680033616.01.T01:CDS 35.0%
GCTTAATACTTGTGATGGTT+AGG - Chr6:69540468-69540487 MsG0680033616.01.T01:CDS 35.0%
GCTTGATGTGGTAAAAAAGT+TGG - Chr6:69540015-69540034 MsG0680033616.01.T01:CDS 35.0%
GGCAGAGAAAGAAAAAAGAA+AGG + Chr6:69535481-69535500 None:intergenic 35.0%
GGTTAGTGATTGCAAACTTA+AGG - Chr6:69540047-69540066 MsG0680033616.01.T01:CDS 35.0%
GGTTCTTGATGGGAATAATT+GGG - Chr6:69541984-69542003 MsG0680033616.01.T01:intron 35.0%
GTGCAAGCAAACTGAAATTA+GGG + Chr6:69541784-69541803 None:intergenic 35.0%
GTGTCTGACCTATAAAACAT+AGG + Chr6:69535502-69535521 None:intergenic 35.0%
GTTAAGAGTTAGGTATGGAT+TGG + Chr6:69541728-69541747 None:intergenic 35.0%
TAAAAGGTCTGATCATGGAT+AGG + Chr6:69538444-69538463 None:intergenic 35.0%
TATACATGCTATGCTTGATG+TGG - Chr6:69540003-69540022 MsG0680033616.01.T01:CDS 35.0%
TATACTGAAAGCTCTCAATC+AGG + Chr6:69539560-69539579 None:intergenic 35.0%
TATGCGATACTGAAAATAGG+GGG - Chr6:69541164-69541183 MsG0680033616.01.T01:intron 35.0%
TCAAGAACAAATTGCTGAGA+AGG - Chr6:69535400-69535419 MsG0680033616.01.T01:intron 35.0%
TCACAAGTATTAAGCACACT+AGG + Chr6:69540463-69540482 None:intergenic 35.0%
TCATAGCAGTTTCAGAATCT+GGG - Chr6:69539513-69539532 MsG0680033616.01.T01:intron 35.0%
TCATCAAGTCAGAAATCTGA+AGG - Chr6:69538666-69538685 MsG0680033616.01.T01:intron 35.0%
TGAAGTTTCAGTCATTAAGG+AGG - Chr6:69542277-69542296 MsG0680033616.01.T01:CDS 35.0%
TGAGATAAAAGGTCTGATCA+TGG + Chr6:69538449-69538468 None:intergenic 35.0%
TGATTTGATACTTGGAGTAC+AGG + Chr6:69540796-69540815 None:intergenic 35.0%
TGCTTATAATAGTGATCGGA+TGG + Chr6:69540088-69540107 None:intergenic 35.0%
TGGTTCTTGATGGGAATAAT+TGG - Chr6:69541983-69542002 MsG0680033616.01.T01:intron 35.0%
TGTACCAAAACCTACATTGT+TGG + Chr6:69541956-69541975 None:intergenic 35.0%
TGTGCAAGCAAACTGAAATT+AGG + Chr6:69541785-69541804 None:intergenic 35.0%
TTAAACATTCCTAAAGGAGG+CGG - Chr6:69538937-69538956 MsG0680033616.01.T01:CDS 35.0%
TTACAAATGCCACAACACAA+AGG + Chr6:69535199-69535218 None:intergenic 35.0%
TTACAATGCAGTTACTAGAG+CGG + Chr6:69539738-69539757 None:intergenic 35.0%
TTCAGCATCTTATTCTCTAC+AGG - Chr6:69535283-69535302 MsG0680033616.01.T01:intron 35.0%
TTCAGTGTAGTCATATGTGT+CGG + Chr6:69535610-69535629 None:intergenic 35.0%
TTCATAGCAGTTTCAGAATC+TGG - Chr6:69539512-69539531 MsG0680033616.01.T01:intron 35.0%
TTGATGGGAATAATTGGGAA+AGG - Chr6:69541989-69542008 MsG0680033616.01.T01:intron 35.0%
TTGCCTACCATTCAATTTAC+AGG - Chr6:69540259-69540278 MsG0680033616.01.T01:intron 35.0%
TTGCGTACTGTTGAAATTTG+AGG - Chr6:69541452-69541471 MsG0680033616.01.T01:intron 35.0%
TTGTGATGGTTAGGTTTATC+GGG - Chr6:69540477-69540496 MsG0680033616.01.T01:CDS 35.0%
TTGTGCCAAAGAGAAGAAAA+AGG - Chr6:69534980-69534999 MsG0680033616.01.T01:CDS 35.0%
TTTCTTCTTCTTTGTCGCTA+GGG + Chr6:69534772-69534791 None:intergenic 35.0%
TTTGACCATTCATGAATCTC+AGG + Chr6:69536227-69536246 None:intergenic 35.0%
TTTGTCTCTCCTGAAAATGT+TGG - Chr6:69539301-69539320 MsG0680033616.01.T01:intron 35.0%
! AAATGAAAGTGCACTAGTCA+TGG - Chr6:69538086-69538105 MsG0680033616.01.T01:intron 35.0%
! ACAAGTAGTGATAGTGAAGA+AGG - Chr6:69534914-69534933 MsG0680033616.01.T01:CDS 35.0%
! AGTTTGAGGTTATCAACCAA+GGG - Chr6:69536129-69536148 MsG0680033616.01.T01:intron 35.0%
! ATCGACTTTACCTGCTTTAT+AGG + Chr6:69538273-69538292 None:intergenic 35.0%
! CATTCTAGAAAACACAGTTC+AGG + Chr6:69537284-69537303 None:intergenic 35.0%
! CCTGCCGTTTAAAGAATATA+CGG - Chr6:69537091-69537110 MsG0680033616.01.T01:intron 35.0%
! CTTCACCTTTTTCTTCTCTT+TGG + Chr6:69534988-69535007 None:intergenic 35.0%
! TAAAGAAGCATGGGATATCT+TGG - Chr6:69542218-69542237 MsG0680033616.01.T01:CDS 35.0%
! TAAGACATTTTCAATGGCAC+TGG - Chr6:69536624-69536643 MsG0680033616.01.T01:intron 35.0%
! TTCAGATTTCTGACTTGATG+AGG + Chr6:69538667-69538686 None:intergenic 35.0%
! TTCATCTCATGCATGCTTTT+GGG - Chr6:69535811-69535830 MsG0680033616.01.T01:intron 35.0%
! TTGATAACCTCAAACTCAAC+TGG + Chr6:69536125-69536144 None:intergenic 35.0%
! TTTCATCTCATGCATGCTTT+TGG - Chr6:69535810-69535829 MsG0680033616.01.T01:intron 35.0%
!! ATATTTTAGATGGTGCTCTC+TGG - Chr6:69538163-69538182 MsG0680033616.01.T01:intron 35.0%
!! GAAATATGAGTTGATGCTGA+TGG - Chr6:69542299-69542318 MsG0680033616.01.T01:CDS 35.0%
!! GCCTCAAACTTTTAAGAACT+TGG + Chr6:69538876-69538895 None:intergenic 35.0%
!! TATTTTAGATGGTGCTCTCT+GGG - Chr6:69538164-69538183 MsG0680033616.01.T01:intron 35.0%
!!! CATTATTAGCTTTTGGACAG+CGG + Chr6:69536283-69536302 None:intergenic 35.0%
!!! CTTTTGGGTTGAACATTACA+GGG - Chr6:69535826-69535845 MsG0680033616.01.T01:intron 35.0%
AAACCGATGTTCCATGAGAT+TGG - Chr6:69540296-69540315 MsG0680033616.01.T01:intron 40.0%
AACACGAGAGATATTGTGAG+GGG - Chr6:69541866-69541885 MsG0680033616.01.T01:intron 40.0%
AACTCAGAGATGCAATTTGG+TGG + Chr6:69536344-69536363 None:intergenic 40.0%
AAGCACATCTGGTATAAGCT+GGG - Chr6:69536688-69536707 MsG0680033616.01.T01:intron 40.0%
AATTAGGGTTTCCAATGGAG+AGG + Chr6:69541769-69541788 None:intergenic 40.0%
ACACAAATGGTCGCAAAGAT+AGG - Chr6:69536976-69536995 MsG0680033616.01.T01:intron 40.0%
ACCAAATTGCATCTCTGAGT+TGG - Chr6:69536343-69536362 MsG0680033616.01.T01:intron 40.0%
ACCAACTCAGAGATGCAATT+TGG + Chr6:69536347-69536366 None:intergenic 40.0%
ACTGGTAGGGACTTGTAATT+TGG - Chr6:69535910-69535929 MsG0680033616.01.T01:intron 40.0%
ACTTCACAGTTCACTTCACT+TGG + Chr6:69540542-69540561 None:intergenic 40.0%
AGAGAGTAATGCAGAGAAGA+AGG - Chr6:69534800-69534819 MsG0680033616.01.T01:CDS 40.0%
AGCTTCTGAACAAAACTCCA+AGG + Chr6:69538613-69538632 None:intergenic 40.0%
AGGAAAATCGAGGTAGGAAA+AGG - Chr6:69534934-69534953 MsG0680033616.01.T01:CDS 40.0%
AGTAAATCACTGTTCCACAG+AGG - Chr6:69539363-69539382 MsG0680033616.01.T01:intron 40.0%
AGTACGTTGCTGACAATTAC+AGG + Chr6:69536662-69536681 None:intergenic 40.0%
AGTCCCATCTGAACATTATC+AGG + Chr6:69537155-69537174 None:intergenic 40.0%
ATAATTGGCATCAAGAGCCT+TGG - Chr6:69541828-69541847 MsG0680033616.01.T01:intron 40.0%
ATCGGTTGAAATGGTTCAAG+CGG - Chr6:69539634-69539653 MsG0680033616.01.T01:intron 40.0%
ATGAATGGTCAAAATCTGGG+TGG - Chr6:69536234-69536253 MsG0680033616.01.T01:intron 40.0%
ATGATACACCGAATGATCCA+GGG - Chr6:69536519-69536538 MsG0680033616.01.T01:intron 40.0%
ATGGGAATAATTGGGAAAGG+TGG - Chr6:69541992-69542011 MsG0680033616.01.T01:intron 40.0%
CAATTCAGTTTCGGATGTGA+AGG - Chr6:69536760-69536779 MsG0680033616.01.T01:intron 40.0%
CATCTAGATTCTGCAAGCTA+AGG - Chr6:69539701-69539720 MsG0680033616.01.T01:intron 40.0%
CCAACAACTGCGCTAATAAT+TGG - Chr6:69541813-69541832 MsG0680033616.01.T01:intron 40.0%
CCAATTATTAGCGCAGTTGT+TGG + Chr6:69541816-69541835 None:intergenic 40.0%
CCATGAGATTGGATCTAGTT+GGG - Chr6:69540307-69540326 MsG0680033616.01.T01:CDS 40.0%
CCATTCAATTTACAGGTCTG+AGG - Chr6:69540266-69540285 MsG0680033616.01.T01:intron 40.0%
CCGTATATTCTTTAAACGGC+AGG + Chr6:69537094-69537113 None:intergenic 40.0%
CCTCAGACCTGTAAATTGAA+TGG + Chr6:69540269-69540288 None:intergenic 40.0%
CTAAAGATCAGTGTGCATAC+TGG - Chr6:69535892-69535911 MsG0680033616.01.T01:intron 40.0%
CTATTGCTCTCCTATAAAGC+AGG - Chr6:69538260-69538279 MsG0680033616.01.T01:intron 40.0%
GAAACACGAGAGATATTGTG+AGG - Chr6:69541864-69541883 MsG0680033616.01.T01:intron 40.0%
GACAAAATCAAGTGCAACCT+TGG + Chr6:69539287-69539306 None:intergenic 40.0%
GACATTTAGATCGTGACTCA+AGG - Chr6:69539031-69539050 MsG0680033616.01.T01:CDS 40.0%
GAGATAGAAGCCAAGATTCA+AGG - Chr6:69535422-69535441 MsG0680033616.01.T01:intron 40.0%
GATCCAATCTCATGGAACAT+CGG + Chr6:69540302-69540321 None:intergenic 40.0%
GATGATATACCGAATGATCC+AGG - Chr6:69536464-69536483 MsG0680033616.01.T01:intron 40.0%
GATGGTAGAGATTCAGTATC+TGG - Chr6:69534732-69534751 MsG0680033616.01.T01:CDS 40.0%
GCAAAATAGTGTTCGAGTCA+TGG - Chr6:69538062-69538081 MsG0680033616.01.T01:intron 40.0%
GCAAGATGTTCTTGAATTGG+TGG - Chr6:69542044-69542063 MsG0680033616.01.T01:CDS 40.0%
GCTGATCCAAGAAAAAAACG+AGG - Chr6:69534867-69534886 MsG0680033616.01.T01:CDS 40.0%
GTACTTGAATCAAGCACATC+TGG - Chr6:69536677-69536696 MsG0680033616.01.T01:intron 40.0%
GTTCTTGAATTGGTGGAGAA+TGG - Chr6:69542051-69542070 MsG0680033616.01.T01:CDS 40.0%
GTTCTTTGTACTGCAACTGT+AGG - Chr6:69540375-69540394 MsG0680033616.01.T01:CDS 40.0%
GTTTCTTCTTCTTTGTCGCT+AGG + Chr6:69534773-69534792 None:intergenic 40.0%
TAATTGGCATCAAGAGCCTT+GGG - Chr6:69541829-69541848 MsG0680033616.01.T01:intron 40.0%
TCATAAGAAGAGGCTTAAGG+AGG - Chr6:69538476-69538495 MsG0680033616.01.T01:CDS 40.0%
TCCATGAGATTGGATCTAGT+TGG - Chr6:69540306-69540325 MsG0680033616.01.T01:CDS 40.0%
TCTGTGGAACAGTGATTTAC+TGG + Chr6:69539364-69539383 None:intergenic 40.0%
TGAAGAAGGAAAATCGAGGT+AGG - Chr6:69534928-69534947 MsG0680033616.01.T01:CDS 40.0%
TGAAGCATGAACGATGACTT+CGG - Chr6:69537738-69537757 MsG0680033616.01.T01:CDS 40.0%
TGATGGCTTGAAAAGGCTAA+AGG - Chr6:69540982-69541001 MsG0680033616.01.T01:CDS 40.0%
TGCGCAAGATGTTCTTGAAT+TGG - Chr6:69542041-69542060 MsG0680033616.01.T01:CDS 40.0%
TGGATCATGTGATATGAAGG+TGG - Chr6:69538119-69538138 MsG0680033616.01.T01:intron 40.0%
TTCTTTACCGGGTACACAAA+TGG - Chr6:69536963-69536982 MsG0680033616.01.T01:intron 40.0%
TTTATAGGTCAGACACTCCT+CGG - Chr6:69535506-69535525 MsG0680033616.01.T01:intron 40.0%
! AGAGGATGAAGTTGGTTATG+GGG + Chr6:69541751-69541770 None:intergenic 40.0%
! AGCATTTTGTACAGCTTCTG+TGG + Chr6:69536037-69536056 None:intergenic 40.0%
! AGGTTCAAAGGGATTAGCAT+AGG - Chr6:69540933-69540952 MsG0680033616.01.T01:CDS 40.0%
! ATCACAATGGAGCTTTGTCA+CGG + Chr6:69537228-69537247 None:intergenic 40.0%
! ATGGCCAACAATGTAGGTTT+TGG - Chr6:69541949-69541968 MsG0680033616.01.T01:intron 40.0%
! ATTGTGAGGGGTGAATTTTC+TGG - Chr6:69541878-69541897 MsG0680033616.01.T01:intron 40.0%
! CTGCCTGATAATGTTCAGAT+GGG - Chr6:69537149-69537168 MsG0680033616.01.T01:intron 40.0%
! CTGCTTCTTTGGTAACTAAC+AGG - Chr6:69539967-69539986 MsG0680033616.01.T01:CDS 40.0%
! CTTCTTGGTGATAATCAGGA+TGG - Chr6:69537982-69538001 MsG0680033616.01.T01:intron 40.0%
! GAGAGGATGAAGTTGGTTAT+GGG + Chr6:69541752-69541771 None:intergenic 40.0%
! GAGTTTGAGGTTATCAACCA+AGG - Chr6:69536128-69536147 MsG0680033616.01.T01:intron 40.0%
! GCACTGATGAAGTCATTGTT+TGG - Chr6:69542018-69542037 MsG0680033616.01.T01:CDS 40.0%
! GTGGTTTTTCGTGAAGATTC+CGG - Chr6:69536545-69536564 MsG0680033616.01.T01:intron 40.0%
! GTTGACTCATATTGCCAAAG+TGG - Chr6:69537888-69537907 MsG0680033616.01.T01:intron 40.0%
! TGATTGCTTAAATTGGTGCC+AGG - Chr6:69536787-69536806 MsG0680033616.01.T01:intron 40.0%
! TTCAATGGCACTGGAGAAAA+GGG - Chr6:69536633-69536652 MsG0680033616.01.T01:intron 40.0%
! TTGCTCATCTGAAGCAGTTA+CGG + Chr6:69538046-69538065 None:intergenic 40.0%
! TTGTGAGGGGTGAATTTTCT+GGG - Chr6:69541879-69541898 MsG0680033616.01.T01:intron 40.0%
! TTTCAATGGCACTGGAGAAA+AGG - Chr6:69536632-69536651 MsG0680033616.01.T01:intron 40.0%
! TTTTGCAGATCTATAGCCCT+AGG + Chr6:69536590-69536609 None:intergenic 40.0%
!! AATTATTTGTGGTGTCGGTG+TGG - Chr6:69535653-69535672 MsG0680033616.01.T01:intron 40.0%
!! AGAAGCATTTCAGAGAGTTC+AGG - Chr6:69538232-69538251 MsG0680033616.01.T01:intron 40.0%
!! AGGTTAAGAGCAGCTTTGAA+AGG + Chr6:69537119-69537138 None:intergenic 40.0%
!! ATATGAGTTGATGCTGATGG+AGG - Chr6:69542302-69542321 MsG0680033616.01.T01:CDS 40.0%
!! ATGGATTTTCTGAGGAGCTT+GGG - Chr6:69537192-69537211 MsG0680033616.01.T01:intron 40.0%
!! CTGCAAGCTAAGGTGTTATT+TGG - Chr6:69539711-69539730 MsG0680033616.01.T01:intron 40.0%
!! CTTAGCTTGCAGAATCTAGA+TGG + Chr6:69539703-69539722 None:intergenic 40.0%
!! TATGGATTTTCTGAGGAGCT+TGG - Chr6:69537191-69537210 MsG0680033616.01.T01:intron 40.0%
!! TTCGTACGTTGTTTGGTTTG+TGG - Chr6:69538525-69538544 MsG0680033616.01.T01:intron 40.0%
!!! GCTTTTGGGTTGAACATTAC+AGG - Chr6:69535825-69535844 MsG0680033616.01.T01:intron 40.0%
!!! GTGCTCTCTGGGATATTTTT+CGG - Chr6:69538175-69538194 MsG0680033616.01.T01:intron 40.0%
!!! TGGAGTTTTGTTCAGAAGCT+AGG - Chr6:69538613-69538632 MsG0680033616.01.T01:CDS 40.0%
!!! TTTTCTGGTTGCTGCTTCTT+TGG - Chr6:69539956-69539975 MsG0680033616.01.T01:CDS 40.0%
AAGAGGCTTAAGGAGGAGTA+TGG - Chr6:69538483-69538502 MsG0680033616.01.T01:CDS 45.0%
AATGCATGCCACATGACAAG+CGG + Chr6:69536716-69536735 None:intergenic 45.0%
ACCAACTTCATCCTCTCCAT+TGG - Chr6:69541755-69541774 MsG0680033616.01.T01:CDS 45.0%
AGATCAGTGTGCATACTGGT+AGG - Chr6:69535896-69535915 MsG0680033616.01.T01:intron 45.0%
AGCATGACAGTGCCAACAAT+AGG + Chr6:69539588-69539607 None:intergenic 45.0%
ATGATATGAGCTCGGCACAA+TGG + Chr6:69537070-69537089 None:intergenic 45.0%
CAAGCACATCTGGTATAAGC+TGG - Chr6:69536687-69536706 MsG0680033616.01.T01:intron 45.0%
CAAGGGCAAGATTATCTGCA+TGG - Chr6:69536146-69536165 MsG0680033616.01.T01:intron 45.0%
CATGCAGATAATCTTGCCCT+TGG + Chr6:69536148-69536167 None:intergenic 45.0%
CATGCATGTCCTTTGTGTTG+TGG - Chr6:69535187-69535206 MsG0680033616.01.T01:intron 45.0%
CCCAACTAGATCCAATCTCA+TGG + Chr6:69540310-69540329 None:intergenic 45.0%
CGAGTGCTTGCGTTATAAAG+AGG - Chr6:69539324-69539343 MsG0680033616.01.T01:intron 45.0%
CGTGGTGATTGGTAAAGTGA+TGG - Chr6:69539056-69539075 MsG0680033616.01.T01:CDS 45.0%
CTCAGCCTGAGATTCATGAA+TGG - Chr6:69536219-69536238 MsG0680033616.01.T01:intron 45.0%
CTGTTCCACAGAGGACAAAT+TGG - Chr6:69539372-69539391 MsG0680033616.01.T01:intron 45.0%
GAAGCAGTTACGGGAGAAAA+CGG + Chr6:69538036-69538055 None:intergenic 45.0%
GACTTGTAGGAATTGAGCCT+TGG - Chr6:69538593-69538612 MsG0680033616.01.T01:intron 45.0%
GAGTAATGCAGAGAAGAAGG+AGG - Chr6:69534803-69534822 MsG0680033616.01.T01:CDS 45.0%
GATCAGTGTGCATACTGGTA+GGG - Chr6:69535897-69535916 MsG0680033616.01.T01:intron 45.0%
GATGATACACCGAATGATCC+AGG - Chr6:69536518-69536537 MsG0680033616.01.T01:intron 45.0%
GCAATCATGGCCAACAATGT+AGG - Chr6:69541943-69541962 MsG0680033616.01.T01:intron 45.0%
GCAGAAGAAGAAAGCTTGCA+AGG - Chr6:69542128-69542147 MsG0680033616.01.T01:CDS 45.0%
GCGACAAAGAAGAAGAAACG+TGG - Chr6:69534774-69534793 MsG0680033616.01.T01:CDS 45.0%
GGTTATGGGGGTTAAGAGTT+AGG + Chr6:69541738-69541757 None:intergenic 45.0%
GGTTTCGTGCAAAGCAATCA+TGG - Chr6:69541930-69541949 MsG0680033616.01.T01:intron 45.0%
TACCTCCAATTTGTCCTCTG+TGG + Chr6:69539380-69539399 None:intergenic 45.0%
TATACCGAATGATCCAGGGA+AGG - Chr6:69536469-69536488 MsG0680033616.01.T01:intron 45.0%
TATCAGGCAGCTTCAAAGCA+AGG + Chr6:69537139-69537158 None:intergenic 45.0%
TATTGTTGGCACTGTCATGC+TGG - Chr6:69539587-69539606 MsG0680033616.01.T01:intron 45.0%
TCCAATGGAGAGGATGAAGT+TGG + Chr6:69541759-69541778 None:intergenic 45.0%
TGCAGATCCAGTTGAGTTTG+AGG - Chr6:69536115-69536134 MsG0680033616.01.T01:intron 45.0%
TGCTGATGGAGGATGATCAA+AGG - Chr6:69542313-69542332 MsG0680033616.01.T01:CDS 45.0%
TGCTTAAAAACCACCTTCCC+TGG + Chr6:69536485-69536504 None:intergenic 45.0%
TGGGGGTTAAGAGTTAGGTA+TGG + Chr6:69541733-69541752 None:intergenic 45.0%
TGGTGATAATCAGGATGGAG+AGG - Chr6:69537987-69538006 MsG0680033616.01.T01:intron 45.0%
TTCATGAATCTCAGGCTGAG+CGG + Chr6:69536219-69536238 None:intergenic 45.0%
TTCCACAGAGGACAAATTGG+AGG - Chr6:69539375-69539394 MsG0680033616.01.T01:intron 45.0%
TTTCCCTGAATGAGAACCCA+AGG + Chr6:69541848-69541867 None:intergenic 45.0%
TTTGCGACCATTTGTGTACC+CGG + Chr6:69536973-69536992 None:intergenic 45.0%
! AAGCACTCGCCAACATTTTC+AGG + Chr6:69539313-69539332 None:intergenic 45.0%
! ATTTACAGGTCTGAGGTCTG+AGG - Chr6:69540273-69540292 MsG0680033616.01.T01:intron 45.0%
! GAGGATGAAGTTGGTTATGG+GGG + Chr6:69541750-69541769 None:intergenic 45.0%
! GCTGCCTGATAATGTTCAGA+TGG - Chr6:69537148-69537167 MsG0680033616.01.T01:intron 45.0%
! GGAGAGGATGAAGTTGGTTA+TGG + Chr6:69541753-69541772 None:intergenic 45.0%
! GGAGCTTCTTGGTGATAATC+AGG - Chr6:69537978-69537997 MsG0680033616.01.T01:intron 45.0%
! TCAATGGCACTGGAGAAAAG+GGG - Chr6:69536634-69536653 MsG0680033616.01.T01:intron 45.0%
! TGCTCATCTGAAGCAGTTAC+GGG + Chr6:69538045-69538064 None:intergenic 45.0%
!! CTGGGATATTTTTCGGAGAG+AGG - Chr6:69538182-69538201 MsG0680033616.01.T01:intron 45.0%
!!! GATGCTGTTTTCATTCCAGC+TGG - Chr6:69538637-69538656 MsG0680033616.01.T01:CDS 45.0%
!!! TAAAATTTAAAATAATAATG+AGG - Chr6:69541353-69541372 MsG0680033616.01.T01:intron 5.0%
ACCACCTTCCCTGGATCATT+CGG + Chr6:69536476-69536495 None:intergenic 50.0%
ACTTGATGAGGACAACCAGC+TGG + Chr6:69538655-69538674 None:intergenic 50.0%
AGAGCCTTGGGTTCTCATTC+AGG - Chr6:69541841-69541860 MsG0680033616.01.T01:intron 50.0%
AGCACCTTGAGCAAGACAAG+AGG - Chr6:69537956-69537975 MsG0680033616.01.T01:intron 50.0%
ATCAGTCGTCTGAGAAGCTC+AGG + Chr6:69536831-69536850 None:intergenic 50.0%
ATGGAGAGGCCAATGTTGAC+AGG - Chr6:69538001-69538020 MsG0680033616.01.T01:intron 50.0%
CAAGACAAGAGGGAGCTTCT+TGG - Chr6:69537967-69537986 MsG0680033616.01.T01:intron 50.0%
CATTCCTAAAGGAGGCGGTT+CGG - Chr6:69538942-69538961 MsG0680033616.01.T01:CDS 50.0%
GAGCCTTGGGTTCTCATTCA+GGG - Chr6:69541842-69541861 MsG0680033616.01.T01:intron 50.0%
GCAAGAAGAGAGAGTCCTTG+AGG + Chr6:69535456-69535475 None:intergenic 50.0%
GCACCTTGAGCAAGACAAGA+GGG - Chr6:69537957-69537976 MsG0680033616.01.T01:intron 50.0%
GGCAGTGTACGTGTCGTATT+CGG - Chr6:69535674-69535693 MsG0680033616.01.T01:intron 50.0%
GGGCAAGATTATCTGCATGG+TGG - Chr6:69536149-69536168 MsG0680033616.01.T01:intron 50.0%
GTCGCAAAGATAGGCTCGAT+TGG - Chr6:69536985-69537004 MsG0680033616.01.T01:intron 50.0%
TACACCGAATGATCCAGGGA+AGG - Chr6:69536523-69536542 MsG0680033616.01.T01:intron 50.0%
TCAAAATCTGGGTGGCATGC+CGG - Chr6:69536242-69536261 MsG0680033616.01.T01:intron 50.0%
TCACGAAAAACCACCTTCCC+TGG + Chr6:69536539-69536558 None:intergenic 50.0%
TGTGTTGCAGTCATGCACCA+AGG - Chr6:69539267-69539286 MsG0680033616.01.T01:intron 50.0%
! AAAGGAGGCGGTTCGGAAAA+TGG - Chr6:69538949-69538968 MsG0680033616.01.T01:CDS 50.0%
! CACGGATTCGAGTTCCACTT+TGG + Chr6:69537905-69537924 None:intergenic 50.0%
! TTTTCCGAACCGCCTCCTTT+AGG + Chr6:69538949-69538968 None:intergenic 50.0%
!! ATTTTCTGAGGAGCTTGGGC+GGG - Chr6:69537196-69537215 MsG0680033616.01.T01:intron 50.0%
!! GATTTTCTGAGGAGCTTGGG+CGG - Chr6:69537195-69537214 MsG0680033616.01.T01:intron 50.0%
!!! CAGTAGGCGTGTTTTGGTGT+CGG - Chr6:69535554-69535573 MsG0680033616.01.T01:intron 50.0%
ACCGAATGATCCAGGGAAGG+TGG - Chr6:69536472-69536491 MsG0680033616.01.T01:intron 55.0%
AGATCGTGACTCAAGGAGCG+TGG - Chr6:69539038-69539057 MsG0680033616.01.T01:CDS 55.0%
ATGAGCTCGGCACAATGGTG+TGG + Chr6:69537065-69537084 None:intergenic 55.0%
CGGCAGGGATGATATGAGCT+CGG + Chr6:69537078-69537097 None:intergenic 55.0%
GCTCCCTCTTGTCTTGCTCA+AGG + Chr6:69537963-69537982 None:intergenic 55.0%
GGTCAGACACTCCTCGGATT+AGG - Chr6:69535512-69535531 MsG0680033616.01.T01:intron 55.0%
! CGGACACAGTAGGCGTGTTT+TGG - Chr6:69535548-69535567 MsG0680033616.01.T01:intron 55.0%
! GACTCAAGGAGCGTGGTGAT+TGG - Chr6:69539045-69539064 MsG0680033616.01.T01:CDS 55.0%
! GATTAGGCGTGTCTCGGTGT+CGG - Chr6:69535528-69535547 MsG0680033616.01.T01:intron 55.0%
! TCCTCGGATTAGGCGTGTCT+CGG - Chr6:69535522-69535541 MsG0680033616.01.T01:intron 55.0%
!! TGTCGGTGTCGTGTCAGTGT+CGG + Chr6:69535593-69535612 None:intergenic 55.0%
!! TTTTCTGAGGAGCTTGGGCG+GGG - Chr6:69537197-69537216 MsG0680033616.01.T01:intron 55.0%
AAGCTCCCCACGACGAAGCT+CGG + Chr6:69536087-69536106 None:intergenic 60.0%
ACCGAGACACGCCTAATCCG+AGG + Chr6:69535526-69535545 None:intergenic 60.0%
CTTCGTCGTGGGGAGCTTCT+AGG - Chr6:69536089-69536108 MsG0680033616.01.T01:intron 60.0%
GCGGATGCTACCATCACTGC+CGG + Chr6:69536264-69536283 None:intergenic 60.0%
GCTGGGAACCGCTTGTCATG+TGG - Chr6:69536705-69536724 MsG0680033616.01.T01:intron 60.0%
! TGTCGTGTCAGTGTCGGGCA+CGG + Chr6:69535587-69535606 None:intergenic 60.0%
!! GTCGGTGTCGTGTCAGTGTC+GGG + Chr6:69535592-69535611 None:intergenic 60.0%
!! GTCTCGGTGTCGGACACAGT+AGG - Chr6:69535538-69535557 MsG0680033616.01.T01:intron 60.0%
CGGAGCAGCAGCGGAGACAA+AGG + Chr6:69536067-69536086 None:intergenic 65.0%
CGTCGTGGGGAGCTTCTAGG+TGG - Chr6:69536092-69536111 MsG0680033616.01.T01:intron 65.0%
CTGCTCCGAGCTTCGTCGTG+GGG - Chr6:69536079-69536098 MsG0680033616.01.T01:intron 65.0%
GACGAAGCTCGGAGCAGCAG+CGG + Chr6:69536076-69536095 None:intergenic 65.0%
GCTGCTCCGAGCTTCGTCGT+GGG - Chr6:69536078-69536097 MsG0680033616.01.T01:intron 65.0%
TGCTGCTCCGAGCTTCGTCG+TGG - Chr6:69536077-69536096 MsG0680033616.01.T01:intron 65.0%
GGGTGGCATGCCGGCAGTGA+TGG - Chr6:69536251-69536270 MsG0680033616.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr6 gene 69534717 69542392 69534717 ID=MsG0680033616.01;Name=MsG0680033616.01
Chr6 mRNA 69534717 69542392 69534717 ID=MsG0680033616.01.T01;Parent=MsG0680033616.01;Name=MsG0680033616.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0|0|1|1|1|10|0|948
Chr6 exon 69542018 69542392 69542018 ID=MsG0680033616.01.T01:exon:2270;Parent=MsG0680033616.01.T01
Chr6 exon 69541666 69541804 69541666 ID=MsG0680033616.01.T01:exon:2271;Parent=MsG0680033616.01.T01
Chr6 exon 69541196 69541262 69541196 ID=MsG0680033616.01.T01:exon:2272;Parent=MsG0680033616.01.T01
Chr6 exon 69540301 69541105 69540301 ID=MsG0680033616.01.T01:exon:2273;Parent=MsG0680033616.01.T01
Chr6 exon 69539850 69540167 69539850 ID=MsG0680033616.01.T01:exon:2274;Parent=MsG0680033616.01.T01
Chr6 exon 69538828 69539229 69538828 ID=MsG0680033616.01.T01:exon:2275;Parent=MsG0680033616.01.T01
Chr6 exon 69538605 69538677 69538605 ID=MsG0680033616.01.T01:exon:2276;Parent=MsG0680033616.01.T01
Chr6 exon 69538422 69538507 69538422 ID=MsG0680033616.01.T01:exon:2277;Parent=MsG0680033616.01.T01
Chr6 exon 69537713 69537832 69537713 ID=MsG0680033616.01.T01:exon:2278;Parent=MsG0680033616.01.T01
Chr6 exon 69534717 69535178 69534717 ID=MsG0680033616.01.T01:exon:2279;Parent=MsG0680033616.01.T01
Chr6 CDS 69542018 69542392 69542018 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Chr6 CDS 69541666 69541804 69541666 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Chr6 CDS 69541196 69541262 69541196 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Chr6 CDS 69540301 69541105 69540301 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Chr6 CDS 69539850 69540167 69539850 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Chr6 CDS 69538828 69539229 69538828 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Chr6 CDS 69538605 69538677 69538605 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Chr6 CDS 69538422 69538507 69538422 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Chr6 CDS 69537713 69537832 69537713 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Chr6 CDS 69534717 69535178 69534717 ID=MsG0680033616.01.T01:cds;Parent=MsG0680033616.01.T01
Gene Sequence

>MsG0680033616.01.T01

ATGGCTTCGTTGAAGGATGGTAGAGATTCAGTATCTGGAGATGTTGAAGTTGCCCTAGCGACAAAGAAGAAGAAACGTGGAAGAGAGAGTAATGCAGAGAAGAAGGAGGCTTTAGAGAATGATGAAGAAACTGGTAAAGGTTCTTCTTCTGCTGATCCAAGAAAAAAACGAGGCAAAAAGAAAAAACTGAAGAAGGAACAAGTAGTGATAGTGAAGAAGGAAAATCGAGGTAGGAAAAGGAAGATAGTTTCTGATGAAAAATATTGTGCCAAAGAGAAGAAAAAGGTGAAGAAGGAAAAGAAAGACCAAAGAGAAGAAAAAGGAAAAGAAGGAGAAGAAAATGCTGGAAAAAAGAAACTTGATTGCATGCATAAGGAGACTAAGAACAAGACAGAAACCAACAATGATCATGACATTGAGTTCTCCAAGTATATGCTGAAATACCTTCTTCCATATTTAAGAGAATTAGATCAAGAACAAATTGCTGAGAAGGAGATAGAAGCCAAGATTCAAGGGCTCTCACTCTCTGATGAGCTAAAAATAGATGTAGCAGATTGCTCTAAAGATCAGTGTGCATACTGTGACAATTGCCAAACCTTAATATTTGACTACCACAGAAGCTGTACAAAATGCTCTTTTGACCTTTGTCTCCGCTGCTGCTCCGAGCTTCGTCGTGGGGAGCTTCTAGGTGGTGCAGATCCAGTTGAGTTTGAGGTTATCAACCAAGGGCAAGATTATCTGCATGGTGGAAATGAAGAGATAACAATAACCATAGAAATTGAATCTCATGCTGCCGCTCAGCCTGAGATTCATGAATGGTCAAAATCTGGGTGGCATGCCGGCAGTGATGGTAGCATCCGCTGTCCAAAAGCTAATAATGAATGTAATCATGGTTTACTTGAGTTGAGAAGAATGTTTCCACCAAATTGCATCTCTGAGTTGGTGTGTAAAGCTGAACAACTTAAAGAAGCCGTTAAACTTGAAGATAAAGAGGAGACTCTTGATAATGGTTGCTCTTGTTTTAAGCCTGTTAAGAAGGAAGATGATATACCGAATGATCCAGGGAAGGTGGTTTTTAAGCATGTTAAGAAGGAAGATGATACACCGAATGATCCAGGGAAGGTGGTTTTTCGTGAAGATTCCGGTGAAAACTTTTTATACTGTCCTAGGGCTATAGATCTGCAAAATCATGAGAAGGATTTAAGACATTTTCAATGGCACTGGAGAAAAGGGGAGCCTGTAATTGTCAGCAACGTACTTGAATCAAGCACATCTGGTATAAGCTGGGAACCGCTTGTCATGTGGCATGCATTTCATCAGATAAGTGATACTAATCACAATTCAGTTTCGGATGTGAAGGCAATTGATTGCTTAAATTGGTGCCAGGGAAATATTAATGTGAACGATTTCTTTACCGGGTACACAAATGGTCGCAAAGATAGGCTCGATTGGCCTCAACTATTGAAATTGAAAGATCATCCTCCTAATTTGTTTGAGAAAAGTTTGCCACACCATTGTGCCGAGCTCATATCATCCCTGCCGTTTAAAGAATATACGGATCCTTTCAAAGCTGCTCTTAACCTTGCTTTGAAGCTGCCTGATAATGTTCAGATGGGACTTACTACATATTTTGCTTATGGATTTTCTGAGGAGCTTGGGCGGGGTGATTCCGTGACAAAGCTCCATTGTGATATGTCTGATGTAGTAAATGTGTTGACTCATATTGCCAAAGTGGAACTCGAATCCGTGAGTATTACTGCAATTAAGAAATTGAAACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTTCTTGGTGATAATCAGGATGGAGAGGCCAATGTTGACAGGCTTGATAATCCGTTTTCTCCCGTAACTGCTTCAGATGAGCAAAATAGTGTTCGAGTCATGGAAAATGAAAGTGCACTAGTCATGGAAAATGAAAGTGGATCATGTGATATGAAGGTGGTTGATTCAGTTCATCAAGAAAATATTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGAATGAATATCTGAAGAAGCATTTCAGAGAGTTCAGGCACATCTATTGCTCTCCTATAAAGCAGGTTATTCACCCTATCCATGATCAGACCTTTTATCTCACTAACAATCATAAGAAGAGGCTTAAGGAGGAGTATGGAATTGAGCCTTGGAGTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCTCATCAAGTCAGAAATCTGAAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGCGAGTGCTTGCGTTATAAAGAGGAAATCCGTAAACTTCCAGTAAATCACTGTTCCACAGAGGACAAATTGGAGGTTTCGTGCAAAGCAATCATGGCCAACAATGTAGGTTTTGGTACAAATATACTGGTTCTTGATGGGAATAATTGGGAAAGGTGGAGTGCACTGATGAAGTCATTGTTTGGTGCGCAAGATGTTCTTGAATTGGTGGAGAATGGATATGAAGATCTTGCTGCAAATGCAACAGATGTTCAAAAAGCTGCATTCAATGAGCAGAAGAAGAAAGCTTGCAAGGCATTGTTCTACATTCAACAAAATGTAGATTCTAATCACTTTGAGAAGATCTCAAAGATAACAAGATCTAAAGAAGCATGGGATATCTTGGCAAAATACTATGAAGGCAGTGATAATGAGAAGCAAGTGAAGTTTCAGTCATTAAGGAGGAAATATGAGTTGATGCTGATGGAGGATGATCAAAGGATCAGTCACTACATCTCCAAATTGCAATCTGTAGTGAATCAGATGAAGGCATGTTGA
Protein sequence

>MsG0680033616.01.T01

MASLKDGRDSVSGDVEVALATKKKKRGRESNAEKKEALENDEETGKGSSSADPRKKRGKKKKLKKEQVVIVKKENRGRKRKIVSDEKYCAKEKKKVKKEKKDQREEKGKEGEENAGKKKLDCMHKETKNKTETNNDHDIEFSKYMLKYLLPYLRELDQEQIAEKEIEAKIQGLSLSDELKIDVADCSKDQCAYCDNCQTLIFDYHRSCTKCSFDLCLRCCSELRRGELLGGADPVEFEVINQGQDYLHGGNEEITITIEIESHAAAQPEIHEWSKSGWHAGSDGSIRCPKANNECNHGLLELRRMFPPNCISELVCKAEQLKEAVKLEDKEETLDNGCSCFKPVKKEDDIPNDPGKVVFKHVKKEDDTPNDPGKVVFREDSGENFLYCPRAIDLQNHEKDLRHFQWHWRKGEPVIVSNVLESSTSGISWEPLVMWHAFHQISDTNHNSVSDVKAIDCLNWCQGNINVNDFFTGYTNGRKDRLDWPQLLKLKDHPPNLFEKSLPHHCAELISSLPFKEYTDPFKAALNLALKLPDNVQMGLTTYFAYGFSEELGRGDSVTKLHCDMSDVVNVLTHIAKVELESVSITAIKKLKQKHLEQDKRELLGDNQDGEANVDRLDNPFSPVTASDEQNSVRVMENESALVMENESGSCDMKVVDSVHQENILDGALWDIFRREDVPKLNEYLKKHFREFRHIYCSPIKQVIHPIHDQTFYLTNNHKKRLKEEYGIEPWSFVQKLGDAVFIPAGCPHQVRNLKSCTKVALDFVSPENVGECLRYKEEIRKLPVNHCSTEDKLEVSCKAIMANNVGFGTNILVLDGNNWERWSALMKSLFGAQDVLELVENGYEDLAANATDVQKAAFNEQKKKACKALFYIQQNVDSNHFEKISKITRSKEAWDILAKYYEGSDNEKQVKFQSLRRKYELMLMEDDQRISHYISKLQSVVNQMKAC*