Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034673.01.T01 | XP_013470448.1 | 87.603 | 363 | 9 | 1 | 1 | 327 | 139 | 501 | 0 | 597 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034673.01.T01 | Q6AUK6 | 45.092 | 326 | 143 | 1 | 1 | 290 | 144 | 469 | 7.95E-101 | 308 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034673.01.T01 | A0A072VS35 | 87.603 | 363 | 9 | 1 | 1 | 327 | 139 | 501 | 0.0 | 597 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0680034673.01.T01 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034673.01.T01 | MTR_1g115415 | 87.603 | 363 | 9 | 1 | 1 | 327 | 139 | 501 | 0.0 | 597 |
| MsG0680034673.01.T01 | MTR_8g105560 | 70.833 | 360 | 38 | 4 | 7 | 325 | 91 | 424 | 2.62e-166 | 475 |
| MsG0680034673.01.T01 | MTR_8g105560 | 39.583 | 384 | 168 | 10 | 1 | 327 | 158 | 534 | 2.20e-57 | 194 |
| MsG0680034673.01.T01 | MTR_5g068860 | 46.084 | 332 | 141 | 2 | 1 | 294 | 171 | 502 | 3.38e-95 | 292 |
| MsG0680034673.01.T01 | MTR_2g034600 | 28.269 | 283 | 191 | 7 | 3 | 281 | 278 | 552 | 8.43e-29 | 116 |
| MsG0680034673.01.T01 | MTR_2g034600 | 27.461 | 193 | 136 | 4 | 70 | 260 | 273 | 463 | 4.15e-18 | 85.5 |
| MsG0680034673.01.T01 | MTR_2g034600 | 28.269 | 283 | 191 | 7 | 3 | 281 | 213 | 487 | 8.46e-29 | 116 |
| MsG0680034673.01.T01 | MTR_2g034600 | 27.461 | 193 | 136 | 4 | 70 | 260 | 208 | 398 | 4.77e-18 | 85.1 |
| MsG0680034673.01.T01 | MTR_2g034600 | 28.269 | 283 | 191 | 7 | 3 | 281 | 274 | 548 | 8.76e-29 | 116 |
| MsG0680034673.01.T01 | MTR_2g034600 | 27.461 | 193 | 136 | 4 | 70 | 260 | 269 | 459 | 4.57e-18 | 85.1 |
| MsG0680034673.01.T01 | MTR_4g070060 | 25.090 | 279 | 203 | 3 | 7 | 282 | 316 | 591 | 2.56e-27 | 112 |
| MsG0680034673.01.T01 | MTR_4g084630 | 23.759 | 282 | 171 | 5 | 1 | 277 | 77 | 319 | 2.32e-24 | 101 |
| MsG0680034673.01.T01 | MTR_5g094610 | 27.652 | 264 | 179 | 6 | 2 | 258 | 192 | 450 | 8.49e-24 | 102 |
| MsG0680034673.01.T01 | MTR_6g003960 | 26.692 | 266 | 190 | 5 | 19 | 282 | 331 | 593 | 3.96e-21 | 94.4 |
| MsG0680034673.01.T01 | MTR_6g003960 | 27.826 | 115 | 83 | 0 | 4 | 118 | 422 | 536 | 3.12e-12 | 67.8 |
| MsG0680034673.01.T01 | MTR_2g067230 | 22.819 | 298 | 181 | 7 | 7 | 301 | 75 | 326 | 3.05e-17 | 81.6 |
| MsG0680034673.01.T01 | MTR_3g092710 | 22.727 | 264 | 190 | 7 | 20 | 276 | 235 | 491 | 8.56e-15 | 75.5 |
| MsG0680034673.01.T01 | MTR_2g049780 | 25.764 | 229 | 133 | 4 | 89 | 281 | 82 | 309 | 2.12e-14 | 73.2 |
| MsG0680034673.01.T01 | MTR_5g041630 | 38.596 | 114 | 65 | 2 | 174 | 282 | 189 | 302 | 6.58e-14 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680034673.01.T01 | AT2G44020 | 71.154 | 364 | 68 | 2 | 1 | 327 | 144 | 507 | 4.71e-179 | 505 |
| MsG0680034673.01.T01 | AT4G02990 | 45.706 | 326 | 141 | 1 | 1 | 290 | 179 | 504 | 1.58e-96 | 296 |
| MsG0680034673.01.T01 | AT4G02990 | 25.728 | 206 | 147 | 3 | 7 | 211 | 153 | 353 | 5.17e-16 | 79.0 |
| MsG0680034673.01.T01 | AT4G02990 | 45.706 | 326 | 141 | 1 | 1 | 290 | 179 | 504 | 1.58e-96 | 296 |
| MsG0680034673.01.T01 | AT4G02990 | 25.728 | 206 | 147 | 3 | 7 | 211 | 153 | 353 | 5.17e-16 | 79.0 |
| MsG0680034673.01.T01 | AT2G21710 | 23.851 | 348 | 221 | 7 | 4 | 312 | 284 | 626 | 1.40e-27 | 113 |
| MsG0680034673.01.T01 | AT2G21710 | 28.814 | 177 | 121 | 4 | 36 | 210 | 280 | 453 | 6.78e-16 | 79.0 |
| MsG0680034673.01.T01 | AT1G78930 | 25.887 | 282 | 202 | 6 | 4 | 282 | 303 | 580 | 1.70e-27 | 113 |
| MsG0680034673.01.T01 | AT1G78930 | 21.538 | 260 | 198 | 3 | 6 | 261 | 233 | 490 | 5.22e-13 | 70.1 |
| MsG0680034673.01.T01 | AT4G38160 | 24.911 | 281 | 201 | 5 | 7 | 280 | 47 | 324 | 5.18e-24 | 100 |
| MsG0680034673.01.T01 | AT4G38160 | 24.911 | 281 | 201 | 5 | 7 | 280 | 47 | 324 | 5.18e-24 | 100 |
| MsG0680034673.01.T01 | AT4G14605 | 28.163 | 245 | 166 | 6 | 36 | 277 | 231 | 468 | 5.55e-24 | 102 |
| MsG0680034673.01.T01 | AT4G14605 | 25.000 | 172 | 127 | 2 | 90 | 260 | 213 | 383 | 2.53e-12 | 67.8 |
| MsG0680034673.01.T01 | AT4G14605 | 28.163 | 245 | 166 | 6 | 36 | 277 | 231 | 468 | 5.55e-24 | 102 |
| MsG0680034673.01.T01 | AT4G14605 | 25.000 | 172 | 127 | 2 | 90 | 260 | 213 | 383 | 2.53e-12 | 67.8 |
| MsG0680034673.01.T01 | AT4G38160 | 24.911 | 281 | 201 | 5 | 7 | 280 | 47 | 324 | 6.60e-24 | 100 |
| MsG0680034673.01.T01 | AT4G38160 | 24.911 | 281 | 201 | 5 | 7 | 280 | 47 | 324 | 1.12e-23 | 100 |
| MsG0680034673.01.T01 | AT5G55580 | 23.462 | 260 | 191 | 5 | 2 | 256 | 79 | 335 | 1.86e-19 | 88.6 |
| MsG0680034673.01.T01 | AT5G54180 | 26.038 | 265 | 179 | 7 | 22 | 278 | 235 | 490 | 3.49e-19 | 88.6 |
| MsG0680034673.01.T01 | AT5G55580 | 23.462 | 260 | 191 | 5 | 2 | 256 | 185 | 441 | 9.57e-19 | 87.0 |
| MsG0680034673.01.T01 | AT2G21710 | 28.814 | 177 | 121 | 4 | 36 | 210 | 280 | 453 | 7.18e-16 | 78.6 |
| MsG0680034673.01.T01 | AT2G21710 | 22.464 | 276 | 172 | 5 | 4 | 240 | 284 | 556 | 8.79e-16 | 78.6 |
| MsG0680034673.01.T01 | AT2G21710 | 28.814 | 177 | 121 | 4 | 36 | 210 | 280 | 453 | 7.30e-16 | 78.6 |
| MsG0680034673.01.T01 | AT2G21710 | 23.048 | 269 | 190 | 9 | 4 | 262 | 284 | 545 | 4.80e-15 | 76.3 |
| MsG0680034673.01.T01 | AT2G21710 | 19.574 | 235 | 184 | 2 | 7 | 238 | 322 | 554 | 1.31e-12 | 68.9 |
| MsG0680034673.01.T01 | AT1G61980 | 23.547 | 327 | 205 | 9 | 4 | 288 | 87 | 410 | 3.17e-13 | 70.5 |
| MsG0680034673.01.T01 | AT1G61980 | 23.547 | 327 | 205 | 9 | 4 | 288 | 87 | 410 | 3.17e-13 | 70.5 |
| MsG0680034673.01.T01 | AT1G61980 | 23.547 | 327 | 205 | 9 | 4 | 288 | 87 | 410 | 3.17e-13 | 70.5 |
| MsG0680034673.01.T01 | AT2G03050 | 28.862 | 246 | 156 | 9 | 43 | 280 | 38 | 272 | 1.51e-12 | 67.4 |
| MsG0680034673.01.T01 | AT2G03050 | 28.862 | 246 | 156 | 9 | 43 | 280 | 39 | 273 | 1.56e-12 | 67.4 |
| MsG0680034673.01.T01 | AT2G34620 | 29.114 | 237 | 153 | 9 | 53 | 282 | 68 | 296 | 3.08e-11 | 63.9 |
| MsG0680034673.01.T01 | AT2G36000 | 23.887 | 247 | 168 | 7 | 47 | 284 | 80 | 315 | 4.16e-11 | 63.5 |
Find 73 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTGTTATTAAGTTTCTT+AGG | 0.190808 | 6:-92608218 | MsG0680034673.01.T01:CDS |
| GCTCAGTATCCACAGATTAT+TGG | 0.226147 | 6:-92607884 | MsG0680034673.01.T01:CDS |
| CTCAGTATCCACAGATTATT+GGG | 0.260746 | 6:-92607883 | MsG0680034673.01.T01:CDS |
| AGAATACTTCACCTATAGTT+TGG | 0.284806 | 6:-92607561 | MsG0680034673.01.T01:CDS |
| AAACTATAGGTGAAGTATTC+TGG | 0.305579 | 6:+92607563 | None:intergenic |
| GTTGATTGTTTGATTAGTTT+TGG | 0.307251 | 6:-92607938 | MsG0680034673.01.T01:CDS |
| TCACCTATAGTTTGGAATCT+AGG | 0.308236 | 6:-92607553 | MsG0680034673.01.T01:CDS |
| TCAAAACGTGATTATGAAAC+TGG | 0.309194 | 6:-92607744 | MsG0680034673.01.T01:CDS |
| CTCTTAAGCCTCTGGTATCT+AGG | 0.309752 | 6:+92607524 | None:intergenic |
| GGATAAAGTGTTCATTGAAT+TGG | 0.316271 | 6:-92607496 | MsG0680034673.01.T01:CDS |
| GATTATTGGGTTGCCTCTTA+AGG | 0.318484 | 6:-92607870 | MsG0680034673.01.T01:CDS |
| TCCTGTTATTAAGTTTCTTA+GGG | 0.320182 | 6:-92608217 | MsG0680034673.01.T01:CDS |
| AGCTTAAACCCTAAAAGTTC+AGG | 0.348375 | 6:+92608147 | None:intergenic |
| CCCCTAAGAAACTTAATAAC+AGG | 0.351787 | 6:+92608216 | None:intergenic |
| ATGTAGAGAAAGATGATATT+GGG | 0.358260 | 6:-92608188 | MsG0680034673.01.T01:CDS |
| GAAGACAATTTAGCCTTAAG+AGG | 0.360188 | 6:+92607857 | None:intergenic |
| GCAATCTCTCTTCAAATCTA+TGG | 0.360662 | 6:+92607456 | None:intergenic |
| CTAATCAAACAATCAACATT+AGG | 0.365413 | 6:+92607944 | None:intergenic |
| ATCTGAAACTATATCATTCC+CGG | 0.367449 | 6:+92607367 | None:intergenic |
| TTAGTATTGGTGTTAATCCT+AGG | 0.373470 | 6:-92608089 | MsG0680034673.01.T01:CDS |
| GATGTAGAGAAAGATGATAT+TGG | 0.374971 | 6:-92608189 | MsG0680034673.01.T01:CDS |
| TCCCCTTGCTCTTAAGCCTC+TGG | 0.375995 | 6:+92607516 | None:intergenic |
| ATCGCAGGATGTGGCTAGTA+TGG | 0.382352 | 6:-92607693 | MsG0680034673.01.T01:CDS |
| GTGGCTTATCTTGTTAGTAT+TGG | 0.382878 | 6:-92608102 | MsG0680034673.01.T01:CDS |
| TCCTAGGGATATTGGTCCTA+TGG | 0.421118 | 6:-92608073 | MsG0680034673.01.T01:CDS |
| TAGATTTGAAGAGAGATTGC+AGG | 0.439180 | 6:-92607453 | MsG0680034673.01.T01:CDS |
| AATCCTAGATTCCAAACTAT+AGG | 0.441030 | 6:+92607550 | None:intergenic |
| GAATGAAGGACCTATACTTT+CGG | 0.441319 | 6:+92607415 | None:intergenic |
| ACCACCCTTGCAAACCCTTC+CGG | 0.446986 | 6:+92607797 | None:intergenic |
| GGTGTTAATCCTAGGGATAT+TGG | 0.451217 | 6:-92608081 | MsG0680034673.01.T01:CDS |
| ATAGGTCCTTCATTCTGTAT+TGG | 0.452739 | 6:-92607407 | MsG0680034673.01.T01:CDS |
| TATAGTTTCAGATGAGGAAG+AGG | 0.454451 | 6:-92607357 | MsG0680034673.01.T01:CDS |
| TACTTCTTCAAAAGTGAGAT+GGG | 0.459036 | 6:-92607614 | MsG0680034673.01.T01:CDS |
| GAGGAAGGAATGTTTGCCTT+CGG | 0.461475 | 6:-92607912 | MsG0680034673.01.T01:CDS |
| TCCGGAAGGGTTTGCAAGGG+TGG | 0.482240 | 6:-92607798 | MsG0680034673.01.T01:CDS |
| GGGATTTCTAGGTCTAAACT+TGG | 0.492563 | 6:-92608297 | MsG0680034673.01.T01:CDS |
| GGTCCTTCATTCTGTATTGG+TGG | 0.495994 | 6:-92607404 | MsG0680034673.01.T01:CDS |
| GGAAGGGTTTGCAAGGGTGG+TGG | 0.497371 | 6:-92607795 | MsG0680034673.01.T01:CDS |
| TACCAGAGGCTTAAGAGCAA+GGG | 0.502139 | 6:-92607518 | MsG0680034673.01.T01:CDS |
| GGTGATCAAGTGTCCTCAAT+TGG | 0.503619 | 6:-92607672 | MsG0680034673.01.T01:CDS |
| TTTGAAGCTTAAGATTGATC+CGG | 0.506836 | 6:-92607816 | MsG0680034673.01.T01:CDS |
| TTACTTCTTCAAAAGTGAGA+TGG | 0.508844 | 6:-92607615 | MsG0680034673.01.T01:CDS |
| TAGTATTGGTGTTAATCCTA+GGG | 0.522188 | 6:-92608088 | MsG0680034673.01.T01:CDS |
| ACTCGCAGCGCAACCAATTG+AGG | 0.528224 | 6:+92607659 | None:intergenic |
| TATATCGAAACCGAAAGTAT+AGG | 0.540273 | 6:-92607425 | MsG0680034673.01.T01:CDS |
| GTCCTTCATTCTGTATTGGT+GGG | 0.540317 | 6:-92607403 | MsG0680034673.01.T01:CDS |
| GGCAATACCATCGCAGGATG+TGG | 0.548475 | 6:-92607702 | MsG0680034673.01.T01:CDS |
| TGATGAAGACTAACCGCTTG+TGG | 0.549609 | 6:+92607764 | None:intergenic |
| AGCTTAAGATTGATCCGGAA+GGG | 0.556415 | 6:-92607811 | MsG0680034673.01.T01:CDS |
| ATACCAGAGGCTTAAGAGCA+AGG | 0.565715 | 6:-92607519 | MsG0680034673.01.T01:CDS |
| TTCCCACCAATACAGAATGA+AGG | 0.566084 | 6:+92607401 | None:intergenic |
| TTGATCCGGAAGGGTTTGCA+AGG | 0.567631 | 6:-92607802 | MsG0680034673.01.T01:CDS |
| CCTGTTATTAAGTTTCTTAG+GGG | 0.577517 | 6:-92608216 | MsG0680034673.01.T01:CDS |
| ACACTAGCATGCAAAACTTG+TGG | 0.577739 | 6:+92608255 | None:intergenic |
| GAGACCTGTAAAAGAGCTTG+TGG | 0.581965 | 6:-92607591 | MsG0680034673.01.T01:CDS |
| TAAGGATACTGTGTAACCAT+AGG | 0.587849 | 6:+92608057 | None:intergenic |
| AGATTTGAAGAGAGATTGCA+GGG | 0.592720 | 6:-92607452 | MsG0680034673.01.T01:CDS |
| ACCAGAGGCTTAAGAGCAAG+GGG | 0.605082 | 6:-92607517 | MsG0680034673.01.T01:CDS |
| TGGTAGGGCAATACCATCGC+AGG | 0.609868 | 6:-92607708 | MsG0680034673.01.T01:CDS |
| TCTGAAACTATATCATTCCC+GGG | 0.612098 | 6:+92607368 | None:intergenic |
| GTGGGAAATTAGAGCTACCC+GGG | 0.615038 | 6:-92607385 | MsG0680034673.01.T01:CDS |
| AAGCTTAAGATTGATCCGGA+AGG | 0.621599 | 6:-92607812 | MsG0680034673.01.T01:CDS |
| GGTGGGAAATTAGAGCTACC+CGG | 0.623613 | 6:-92607386 | MsG0680034673.01.T01:CDS |
| AGGTACTATGAGTACTTCAG+TGG | 0.624393 | 6:-92608121 | MsG0680034673.01.T01:CDS |
| AGAGGCAACCCAATAATCTG+TGG | 0.627647 | 6:+92607875 | None:intergenic |
| ACCATAGGACCAATATCCCT+AGG | 0.641670 | 6:+92608072 | None:intergenic |
| ACTTCTTCAAAAGTGAGATG+GGG | 0.645282 | 6:-92607613 | MsG0680034673.01.T01:CDS |
| TGATCCGGAAGGGTTTGCAA+GGG | 0.654444 | 6:-92607801 | MsG0680034673.01.T01:CDS |
| GAATGATATAGTTTCAGATG+AGG | 0.656227 | 6:-92607363 | MsG0680034673.01.T01:CDS |
| ATACTAGCCACATCCTGCGA+TGG | 0.661576 | 6:+92607695 | None:intergenic |
| GGATACTGAGCAATAACCGA+AGG | 0.679020 | 6:+92607896 | None:intergenic |
| GGTGGAGAAGATGCCACAAG+CGG | 0.685562 | 6:-92607777 | MsG0680034673.01.T01:CDS |
| GGATTAAACCTAGATACCAG+AGG | 0.689589 | 6:-92607532 | MsG0680034673.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAGGTTATTTAGAAAAAATT+GGG | - | Chr6:92607326-92607345 | MsG0680034673.01.T01:CDS | 15.0% |
| !! | TTAGGTTATTTAGAAAAAAT+TGG | - | Chr6:92607325-92607344 | MsG0680034673.01.T01:CDS | 15.0% |
| !!! | AAAAATATCCTGAACTTTTA+GGG | - | Chr6:92607488-92607507 | MsG0680034673.01.T01:CDS | 20.0% |
| !!! | TTTTCTAAATAACCTAAAAC+AGG | + | Chr6:92607322-92607341 | None:intergenic | 20.0% |
| ! | ATGTAGAGAAAGATGATATT+GGG | - | Chr6:92607455-92607474 | MsG0680034673.01.T01:CDS | 25.0% |
| ! | CTAATCAAACAATCAACATT+AGG | + | Chr6:92607702-92607721 | None:intergenic | 25.0% |
| ! | TAGAAAAAATTGGGATTTCT+AGG | - | Chr6:92607335-92607354 | MsG0680034673.01.T01:CDS | 25.0% |
| ! | TCCTGTTATTAAGTTTCTTA+GGG | - | Chr6:92607426-92607445 | MsG0680034673.01.T01:CDS | 25.0% |
| ! | TGATTACTTGGTTATTTACT+TGG | - | Chr6:92607651-92607670 | MsG0680034673.01.T01:CDS | 25.0% |
| !! | CAAAAATATCCTGAACTTTT+AGG | - | Chr6:92607487-92607506 | MsG0680034673.01.T01:CDS | 25.0% |
| !!! | ACACAGTATCCTTATTTTTT+AGG | - | Chr6:92607595-92607614 | MsG0680034673.01.T01:CDS | 25.0% |
| !!! | CACAGTATCCTTATTTTTTA+GGG | - | Chr6:92607596-92607615 | MsG0680034673.01.T01:CDS | 25.0% |
| !!! | GTTGATTGTTTGATTAGTTT+TGG | - | Chr6:92607705-92607724 | MsG0680034673.01.T01:CDS | 25.0% |
| AATCCTAGATTCCAAACTAT+AGG | + | Chr6:92608096-92608115 | None:intergenic | 30.0% | |
| ACTCTCATCCCTAAAAAATA+AGG | + | Chr6:92607607-92607626 | None:intergenic | 30.0% | |
| AGAATACTTCACCTATAGTT+TGG | - | Chr6:92608082-92608101 | MsG0680034673.01.T01:CDS | 30.0% | |
| ATAACCAAGTAATCAACAAG+AGG | + | Chr6:92607646-92607665 | None:intergenic | 30.0% | |
| CCTGTTATTAAGTTTCTTAG+GGG | - | Chr6:92607427-92607446 | MsG0680034673.01.T01:CDS | 30.0% | |
| CTCCTGTTATTAAGTTTCTT+AGG | - | Chr6:92607425-92607444 | MsG0680034673.01.T01:CDS | 30.0% | |
| GAATGATATAGTTTCAGATG+AGG | - | Chr6:92608280-92608299 | MsG0680034673.01.T01:CDS | 30.0% | |
| GATGTAGAGAAAGATGATAT+TGG | - | Chr6:92607454-92607473 | MsG0680034673.01.T01:CDS | 30.0% | |
| TACTTCTTCAAAAGTGAGAT+GGG | - | Chr6:92608029-92608048 | MsG0680034673.01.T01:intron | 30.0% | |
| TCAAAACGTGATTATGAAAC+TGG | - | Chr6:92607899-92607918 | MsG0680034673.01.T01:CDS | 30.0% | |
| TTACTTCTTCAAAAGTGAGA+TGG | - | Chr6:92608028-92608047 | MsG0680034673.01.T01:intron | 30.0% | |
| ! | AAACTATAGGTGAAGTATTC+TGG | + | Chr6:92608083-92608102 | None:intergenic | 30.0% |
| ! | AAACTGGTTGAGTTTTTACT+TGG | - | Chr6:92607915-92607934 | MsG0680034673.01.T01:CDS | 30.0% |
| ! | ATCTGAAACTATATCATTCC+CGG | + | Chr6:92608279-92608298 | None:intergenic | 30.0% |
| ! | GGATAAAGTGTTCATTGAAT+TGG | - | Chr6:92608147-92608166 | MsG0680034673.01.T01:CDS | 30.0% |
| ! | TATATCGAAACCGAAAGTAT+AGG | - | Chr6:92608218-92608237 | MsG0680034673.01.T01:CDS | 30.0% |
| ! | TTTGAAGCTTAAGATTGATC+CGG | - | Chr6:92607827-92607846 | MsG0680034673.01.T01:CDS | 30.0% |
| !! | TAGTATTGGTGTTAATCCTA+GGG | - | Chr6:92607555-92607574 | MsG0680034673.01.T01:CDS | 30.0% |
| !! | TTAGTATTGGTGTTAATCCT+AGG | - | Chr6:92607554-92607573 | MsG0680034673.01.T01:CDS | 30.0% |
| !!! | GTTTGATTAGTTTTGGTTTG+AGG | - | Chr6:92607712-92607731 | MsG0680034673.01.T01:CDS | 30.0% |
| !!! | TATTTTTTAGGGATGAGAGT+TGG | - | Chr6:92607607-92607626 | MsG0680034673.01.T01:CDS | 30.0% |
| ACTTCTTCAAAAGTGAGATG+GGG | - | Chr6:92608030-92608049 | MsG0680034673.01.T01:intron | 35.0% | |
| AGATTTGAAGAGAGATTGCA+GGG | - | Chr6:92608191-92608210 | MsG0680034673.01.T01:CDS | 35.0% | |
| AGCTTAAACCCTAAAAGTTC+AGG | + | Chr6:92607499-92607518 | None:intergenic | 35.0% | |
| ATAGGTCCTTCATTCTGTAT+TGG | - | Chr6:92608236-92608255 | MsG0680034673.01.T01:CDS | 35.0% | |
| CCCCTAAGAAACTTAATAAC+AGG | + | Chr6:92607430-92607449 | None:intergenic | 35.0% | |
| CTCAGTATCCACAGATTATT+GGG | - | Chr6:92607760-92607779 | MsG0680034673.01.T01:CDS | 35.0% | |
| GAATGAAGGACCTATACTTT+CGG | + | Chr6:92608231-92608250 | None:intergenic | 35.0% | |
| GCAATCTCTCTTCAAATCTA+TGG | + | Chr6:92608190-92608209 | None:intergenic | 35.0% | |
| GTGGCTTATCTTGTTAGTAT+TGG | - | Chr6:92607541-92607560 | MsG0680034673.01.T01:CDS | 35.0% | |
| TAAGGATACTGTGTAACCAT+AGG | + | Chr6:92607589-92607608 | None:intergenic | 35.0% | |
| TAGATTTGAAGAGAGATTGC+AGG | - | Chr6:92608190-92608209 | MsG0680034673.01.T01:CDS | 35.0% | |
| TATAGTTTCAGATGAGGAAG+AGG | - | Chr6:92608286-92608305 | MsG0680034673.01.T01:CDS | 35.0% | |
| ! | AAAGCCTCTTGTTGATTACT+TGG | - | Chr6:92607639-92607658 | MsG0680034673.01.T01:CDS | 35.0% |
| ! | GGTTGAGTTTTTACTTGGTA+GGG | - | Chr6:92607920-92607939 | MsG0680034673.01.T01:CDS | 35.0% |
| ! | TCACCTATAGTTTGGAATCT+AGG | - | Chr6:92608090-92608109 | MsG0680034673.01.T01:CDS | 35.0% |
| ! | TCTGAAACTATATCATTCCC+GGG | + | Chr6:92608278-92608297 | None:intergenic | 35.0% |
| ! | TGGTTGAGTTTTTACTTGGT+AGG | - | Chr6:92607919-92607938 | MsG0680034673.01.T01:CDS | 35.0% |
| !! | GAAGACAATTTAGCCTTAAG+AGG | + | Chr6:92607789-92607808 | None:intergenic | 35.0% |
| !!! | CTTTTAGGGTTTAAGCTTGA+AGG | - | Chr6:92607502-92607521 | MsG0680034673.01.T01:CDS | 35.0% |
| !!! | GATTAGTTTTGGTTTGAGGA+AGG | - | Chr6:92607716-92607735 | MsG0680034673.01.T01:CDS | 35.0% |
| AAGCTTAAGATTGATCCGGA+AGG | - | Chr6:92607831-92607850 | MsG0680034673.01.T01:CDS | 40.0% | |
| ACACTAGCATGCAAAACTTG+TGG | + | Chr6:92607391-92607410 | None:intergenic | 40.0% | |
| AGCTTAAGATTGATCCGGAA+GGG | - | Chr6:92607832-92607851 | MsG0680034673.01.T01:CDS | 40.0% | |
| AGGTACTATGAGTACTTCAG+TGG | - | Chr6:92607522-92607541 | MsG0680034673.01.T01:CDS | 40.0% | |
| GCTCAGTATCCACAGATTAT+TGG | - | Chr6:92607759-92607778 | MsG0680034673.01.T01:CDS | 40.0% | |
| GGATTAAACCTAGATACCAG+AGG | - | Chr6:92608111-92608130 | MsG0680034673.01.T01:CDS | 40.0% | |
| GGTGTTAATCCTAGGGATAT+TGG | - | Chr6:92607562-92607581 | MsG0680034673.01.T01:CDS | 40.0% | |
| TTCCCACCAATACAGAATGA+AGG | + | Chr6:92608245-92608264 | None:intergenic | 40.0% | |
| ! | AACTCCACAAGCTCTTTTAC+AGG | + | Chr6:92608059-92608078 | None:intergenic | 40.0% |
| ! | GATTATTGGGTTGCCTCTTA+AGG | - | Chr6:92607773-92607792 | MsG0680034673.01.T01:CDS | 40.0% |
| ! | GGGATTTCTAGGTCTAAACT+TGG | - | Chr6:92607346-92607365 | MsG0680034673.01.T01:CDS | 40.0% |
| ! | GTCCTTCATTCTGTATTGGT+GGG | - | Chr6:92608240-92608259 | MsG0680034673.01.T01:CDS | 40.0% |
| ACCATAGGACCAATATCCCT+AGG | + | Chr6:92607574-92607593 | None:intergenic | 45.0% | |
| AGAGGCAACCCAATAATCTG+TGG | + | Chr6:92607771-92607790 | None:intergenic | 45.0% | |
| ATACCAGAGGCTTAAGAGCA+AGG | - | Chr6:92608124-92608143 | MsG0680034673.01.T01:CDS | 45.0% | |
| CTCTTAAGCCTCTGGTATCT+AGG | + | Chr6:92608122-92608141 | None:intergenic | 45.0% | |
| GAGACCTGTAAAAGAGCTTG+TGG | - | Chr6:92608052-92608071 | MsG0680034673.01.T01:CDS | 45.0% | |
| GAGGAAGGAATGTTTGCCTT+CGG | - | Chr6:92607731-92607750 | MsG0680034673.01.T01:CDS | 45.0% | |
| GGATACTGAGCAATAACCGA+AGG | + | Chr6:92607750-92607769 | None:intergenic | 45.0% | |
| GGTCCTTCATTCTGTATTGG+TGG | - | Chr6:92608239-92608258 | MsG0680034673.01.T01:CDS | 45.0% | |
| GGTGATCAAGTGTCCTCAAT+TGG | - | Chr6:92607971-92607990 | MsG0680034673.01.T01:CDS | 45.0% | |
| TACCAGAGGCTTAAGAGCAA+GGG | - | Chr6:92608125-92608144 | MsG0680034673.01.T01:CDS | 45.0% | |
| TCCTAGGGATATTGGTCCTA+TGG | - | Chr6:92607570-92607589 | MsG0680034673.01.T01:CDS | 45.0% | |
| TGATGAAGACTAACCGCTTG+TGG | + | Chr6:92607882-92607901 | None:intergenic | 45.0% | |
| ACCAGAGGCTTAAGAGCAAG+GGG | - | Chr6:92608126-92608145 | MsG0680034673.01.T01:CDS | 50.0% | |
| ATACTAGCCACATCCTGCGA+TGG | + | Chr6:92607951-92607970 | None:intergenic | 50.0% | |
| ATCGCAGGATGTGGCTAGTA+TGG | - | Chr6:92607950-92607969 | MsG0680034673.01.T01:CDS | 50.0% | |
| GGTGGGAAATTAGAGCTACC+CGG | - | Chr6:92608257-92608276 | MsG0680034673.01.T01:CDS | 50.0% | |
| GTGGGAAATTAGAGCTACCC+GGG | - | Chr6:92608258-92608277 | MsG0680034673.01.T01:CDS | 50.0% | |
| TGATCCGGAAGGGTTTGCAA+GGG | - | Chr6:92607842-92607861 | MsG0680034673.01.T01:CDS | 50.0% | |
| TTGATCCGGAAGGGTTTGCA+AGG | - | Chr6:92607841-92607860 | MsG0680034673.01.T01:CDS | 50.0% | |
| ACCACCCTTGCAAACCCTTC+CGG | + | Chr6:92607849-92607868 | None:intergenic | 55.0% | |
| ACTCGCAGCGCAACCAATTG+AGG | + | Chr6:92607987-92608006 | None:intergenic | 55.0% | |
| GGCAATACCATCGCAGGATG+TGG | - | Chr6:92607941-92607960 | MsG0680034673.01.T01:CDS | 55.0% | |
| GGTGGAGAAGATGCCACAAG+CGG | - | Chr6:92607866-92607885 | MsG0680034673.01.T01:CDS | 55.0% | |
| TCCCCTTGCTCTTAAGCCTC+TGG | + | Chr6:92608130-92608149 | None:intergenic | 55.0% | |
| TGGTAGGGCAATACCATCGC+AGG | - | Chr6:92607935-92607954 | MsG0680034673.01.T01:CDS | 55.0% | |
| GGAAGGGTTTGCAAGGGTGG+TGG | - | Chr6:92607848-92607867 | MsG0680034673.01.T01:CDS | 60.0% | |
| TCCGGAAGGGTTTGCAAGGG+TGG | - | Chr6:92607845-92607864 | MsG0680034673.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 92607313 | 92608352 | 92607313 | ID=MsG0680034673.01;Name=MsG0680034673.01 |
| Chr6 | mRNA | 92607313 | 92608352 | 92607313 | ID=MsG0680034673.01.T01;Parent=MsG0680034673.01;Name=MsG0680034673.01.T01;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|0|0|2|0|327 |
| Chr6 | exon | 92607313 | 92607992 | 92607313 | ID=MsG0680034673.01.T01:exon:12894;Parent=MsG0680034673.01.T01 |
| Chr6 | exon | 92608049 | 92608352 | 92608049 | ID=MsG0680034673.01.T01:exon:12893;Parent=MsG0680034673.01.T01 |
| Chr6 | CDS | 92608049 | 92608352 | 92608049 | ID=MsG0680034673.01.T01:cds;Parent=MsG0680034673.01.T01 |
| Chr6 | CDS | 92607313 | 92607992 | 92607313 | ID=MsG0680034673.01.T01:cds;Parent=MsG0680034673.01.T01 |
| Gene Sequence |
| Protein sequence |
