AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0680035379.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035379.01.T01 MTR_1g021570 82.927 82 14 0 45 126 345 426 1.51e-40 142
MsG0680035379.01.T01 MTR_1g021570 82.927 82 14 0 45 126 357 438 1.67e-40 142
MsG0680035379.01.T01 MTR_1g021570 82.927 82 14 0 45 126 500 581 2.79e-40 142
MsG0680035379.01.T01 MTR_2g100290 55.422 83 37 0 44 126 491 573 1.11e-26 103
MsG0680035379.01.T01 MTR_8g016120 53.012 83 39 0 44 126 489 571 2.29e-26 102
MsG0680035379.01.T01 MTR_8g016120 53.012 83 39 0 44 126 489 571 2.56e-26 102
MsG0680035379.01.T01 MTR_8g101670 55.422 83 37 0 44 126 476 558 4.40e-25 99.4
MsG0680035379.01.T01 MTR_8g101670 55.422 83 37 0 44 126 488 570 4.41e-25 99.4
MsG0680035379.01.T01 MTR_8g101670 55.422 83 37 0 44 126 488 570 4.42e-25 99.4
MsG0680035379.01.T01 MTR_1g021570 70.312 64 19 0 45 108 500 563 6.36e-23 92.8
MsG0680035379.01.T01 MTR_3g088855 47.297 74 38 1 53 126 403 475 9.82e-17 75.5
MsG0680035379.01.T01 MTR_4g127840 50.000 76 36 2 52 126 159 233 4.74e-16 73.2
MsG0680035379.01.T01 MTR_3g011730 43.373 83 42 2 44 126 396 473 9.20e-16 72.4
MsG0680035379.01.T01 MTR_8g042370 43.373 83 42 2 44 126 195 272 2.84e-15 70.9
MsG0680035379.01.T01 MTR_2g073630 34.737 95 61 1 32 126 702 795 6.73e-15 70.1
MsG0680035379.01.T01 MTR_2g075060 36.842 95 59 1 32 126 736 829 8.19e-15 70.1
MsG0680035379.01.T01 MTR_2g073640 36.842 95 59 1 32 126 743 836 1.08e-14 69.7
MsG0680035379.01.T01 MTR_6g088610 44.578 83 45 1 44 126 379 460 1.28e-14 69.3
MsG0680035379.01.T01 MTR_5g083910 35.789 95 60 1 32 126 602 695 1.37e-14 69.3
MsG0680035379.01.T01 MTR_5g083910 35.789 95 60 1 32 126 734 827 1.54e-14 68.9
MsG0680035379.01.T01 MTR_3g116450 43.373 83 46 1 44 126 372 453 1.85e-14 68.9
MsG0680035379.01.T01 MTR_2g039290 46.250 80 41 2 48 126 928 1006 1.89e-14 68.9
MsG0680035379.01.T01 MTR_2g039290 46.250 80 41 2 48 126 1150 1228 1.91e-14 68.9
MsG0680035379.01.T01 MTR_2g039290 46.250 80 41 2 48 126 1162 1240 1.91e-14 68.9
MsG0680035379.01.T01 MTR_7g099220 45.333 75 40 1 52 126 427 500 2.38e-14 68.6
MsG0680035379.01.T01 MTR_2g074980 34.737 95 61 1 32 126 704 797 3.05e-14 68.2
MsG0680035379.01.T01 MTR_1g082310 47.059 68 35 1 45 112 238 304 3.17e-14 68.2
MsG0680035379.01.T01 MTR_2g073650 34.737 95 61 1 32 126 736 829 3.68e-14 68.2
MsG0680035379.01.T01 MTR_8g016330 46.250 80 41 2 48 126 554 632 4.37e-14 67.8
MsG0680035379.01.T01 MTR_1g020060 43.750 80 43 2 48 126 140 218 6.22e-14 67.0
MsG0680035379.01.T01 MTR_2g073520 34.737 95 61 1 32 126 738 831 6.26e-14 67.4
MsG0680035379.01.T01 MTR_2g073520 34.737 95 61 1 32 126 606 699 6.36e-14 67.4
MsG0680035379.01.T01 MTR_5g014720 48.052 77 38 2 51 126 800 875 7.18e-14 67.4
MsG0680035379.01.T01 MTR_5g034210 48.052 77 33 2 53 126 152 224 8.08e-14 67.0
MsG0680035379.01.T01 MTR_5g034210 48.052 77 33 2 53 126 159 231 8.16e-14 67.0
MsG0680035379.01.T01 MTR_5g034210 48.052 77 33 2 53 126 239 311 8.66e-14 67.0
MsG0680035379.01.T01 MTR_8g087740 43.038 79 44 1 48 126 759 836 9.24e-14 67.0
MsG0680035379.01.T01 MTR_5g019940 42.169 83 47 1 44 126 340 421 1.10e-13 66.6
MsG0680035379.01.T01 MTR_2g073540 33.684 95 62 1 32 126 500 593 1.11e-13 66.6
MsG0680035379.01.T01 MTR_2g073650 34.783 92 59 1 32 123 736 826 1.14e-13 66.6
MsG0680035379.01.T01 MTR_2g073560 34.737 95 61 1 32 126 712 805 1.22e-13 66.6
MsG0680035379.01.T01 MTR_2g073600 34.737 95 61 1 32 126 736 829 1.26e-13 66.6
MsG0680035379.01.T01 MTR_2g074840 34.737 95 61 1 32 126 737 830 1.27e-13 66.6
MsG0680035379.01.T01 MTR_3g064080 40.964 83 48 1 44 126 410 491 1.38e-13 66.2
MsG0680035379.01.T01 MTR_1g069340 43.529 85 45 2 44 126 436 519 1.88e-13 65.9
MsG0680035379.01.T01 MTR_7g109670 44.737 76 40 2 52 126 476 550 1.89e-13 65.9
MsG0680035379.01.T01 MTR_8g058250 34.737 95 61 1 32 126 738 831 2.23e-13 65.9
MsG0680035379.01.T01 MTR_7g113980 45.588 68 36 1 45 112 212 278 2.24e-13 65.5
MsG0680035379.01.T01 MTR_2g020810 42.667 75 41 2 53 126 214 287 2.25e-13 65.5
MsG0680035379.01.T01 MTR_8g058250 34.737 95 61 1 32 126 738 831 2.32e-13 65.9
MsG0680035379.01.T01 MTR_8g058250 43.243 74 41 1 53 126 663 735 2.66e-13 65.5
MsG0680035379.01.T01 MTR_4g133920 41.667 84 46 3 44 126 123 204 2.98e-13 65.1
MsG0680035379.01.T01 MTR_4g128990 38.542 96 58 1 14 109 319 413 4.40e-13 64.7
MsG0680035379.01.T01 MTR_8g077850 39.759 83 49 1 44 126 421 502 4.57e-13 64.7
MsG0680035379.01.T01 MTR_4g128990 38.542 96 58 1 14 109 320 414 4.67e-13 64.7
MsG0680035379.01.T01 MTR_3g067650 46.154 65 34 1 47 111 275 338 5.16e-13 64.7
MsG0680035379.01.T01 MTR_3g011630 50.820 61 26 1 52 112 145 201 5.28e-13 64.7
MsG0680035379.01.T01 MTR_2g105680 55.357 56 24 1 53 108 887 941 5.47e-13 64.7
MsG0680035379.01.T01 MTR_8g442270 46.053 76 37 3 53 126 573 646 6.48e-13 64.3
MsG0680035379.01.T01 MTR_2g075250 33.684 95 62 1 32 126 740 833 7.07e-13 64.3
MsG0680035379.01.T01 MTR_1g031780 45.946 74 39 1 53 126 146 218 7.39e-13 64.3
MsG0680035379.01.T01 MTR_1g086870 44.000 75 40 2 53 126 383 456 7.59e-13 64.3
MsG0680035379.01.T01 MTR_2g089360 50.000 66 32 1 43 108 579 643 7.67e-13 64.3
MsG0680035379.01.T01 MTR_1g029690 43.548 62 34 1 48 109 444 504 7.69e-13 64.3
MsG0680035379.01.T01 MTR_4g126270 44.000 75 40 2 53 126 635 708 9.44e-13 63.9
MsG0680035379.01.T01 MTR_2g075250 33.684 95 62 1 32 126 645 738 1.10e-12 63.9
MsG0680035379.01.T01 MTR_1g098360 44.000 75 40 1 52 126 198 270 1.29e-12 63.5
MsG0680035379.01.T01 MTR_4g069970 45.333 75 40 1 52 126 234 307 1.45e-12 63.2
MsG0680035379.01.T01 MTR_4g069970 45.333 75 40 1 52 126 234 307 1.46e-12 63.2
MsG0680035379.01.T01 MTR_8g461260 35.789 95 60 1 32 126 120 213 1.69e-12 63.2
MsG0680035379.01.T01 MTR_7g111690 44.595 74 40 1 53 126 290 362 2.31e-12 62.8
MsG0680035379.01.T01 MTR_7g111690 44.595 74 40 1 53 126 290 362 2.56e-12 62.8
MsG0680035379.01.T01 MTR_4g123880 43.243 74 41 1 53 126 274 346 2.57e-12 62.8
MsG0680035379.01.T01 MTR_4g123880 43.243 74 41 1 53 126 274 346 2.61e-12 62.8
MsG0680035379.01.T01 MTR_3g115500 41.250 80 45 2 48 126 44 122 3.04e-12 61.6
MsG0680035379.01.T01 MTR_2g078810 47.297 74 38 1 53 126 889 961 3.16e-12 62.4
MsG0680035379.01.T01 MTR_4g126930 44.928 69 37 1 44 112 221 288 3.18e-12 62.4
MsG0680035379.01.T01 MTR_2g078810 47.297 74 38 1 53 126 869 941 3.18e-12 62.4
MsG0680035379.01.T01 MTR_2g074990 33.684 95 62 1 32 126 726 819 3.23e-12 62.4
MsG0680035379.01.T01 MTR_4g069970 45.333 75 40 1 52 126 234 307 3.28e-12 62.4
MsG0680035379.01.T01 MTR_3g115500 41.250 80 45 2 48 126 158 236 3.53e-12 62.0
MsG0680035379.01.T01 MTR_8g064690 44.578 83 45 1 44 126 395 476 3.60e-12 62.4
MsG0680035379.01.T01 MTR_7g083500 40.506 79 45 2 49 126 172 249 3.95e-12 62.0
MsG0680035379.01.T01 MTR_3g115500 41.250 80 45 2 48 126 140 218 4.00e-12 62.0
MsG0680035379.01.T01 MTR_8g106100 40.000 75 44 1 52 126 674 747 4.92e-12 62.0
MsG0680035379.01.T01 MTR_5g077430 42.667 75 42 1 52 126 689 762 5.93e-12 61.6
MsG0680035379.01.T01 MTR_4g117040 39.506 81 45 3 48 126 536 614 6.93e-12 61.6
MsG0680035379.01.T01 MTR_2g064940 33.684 95 62 1 32 126 117 210 7.49e-12 61.2
MsG0680035379.01.T01 MTR_3g007650 43.836 73 34 2 53 125 619 684 8.00e-12 61.2
MsG0680035379.01.T01 MTR_4g117030 40.741 81 44 3 48 126 497 575 8.61e-12 61.2
MsG0680035379.01.T01 MTR_2g064930 42.308 78 44 1 49 126 139 215 8.88e-12 60.5
MsG0680035379.01.T01 MTR_0205s0040 40.964 83 45 1 44 126 942 1020 9.38e-12 61.2
MsG0680035379.01.T01 MTR_0205s0040 34.940 83 49 2 43 125 413 490 3.06e-11 59.7
MsG0680035379.01.T01 MTR_7g018890 43.243 74 41 1 53 126 488 560 9.99e-12 61.2
MsG0680035379.01.T01 MTR_2g064930 42.667 75 42 1 49 123 139 212 1.10e-11 59.7
MsG0680035379.01.T01 MTR_5g017080 44.000 75 41 1 52 126 261 334 1.15e-11 60.8
MsG0680035379.01.T01 MTR_8g052080 43.421 76 39 3 53 126 580 653 1.15e-11 60.8
MsG0680035379.01.T01 MTR_2g064930 42.308 78 44 1 49 126 139 215 1.22e-11 60.8
MsG0680035379.01.T01 MTR_4g117020 36.250 80 49 2 48 126 536 614 1.26e-11 60.8
MsG0680035379.01.T01 MTR_5g087370 43.243 74 38 2 52 122 747 819 1.27e-11 60.8
MsG0680035379.01.T01 MTR_3g007600 46.154 78 34 3 53 126 133 206 1.31e-11 60.5
MsG0680035379.01.T01 MTR_2g075010 33.684 95 62 1 32 126 728 821 1.34e-11 60.8
MsG0680035379.01.T01 MTR_7g058550 48.438 64 32 1 53 116 601 663 1.42e-11 60.5
MsG0680035379.01.T01 MTR_8g052420 44.737 76 38 3 53 126 560 633 1.46e-11 60.5
MsG0680035379.01.T01 MTR_8g052570 43.421 76 39 3 53 126 157 230 1.47e-11 60.5
MsG0680035379.01.T01 MTR_8g052517 43.421 76 39 3 53 126 157 230 1.47e-11 60.5
MsG0680035379.01.T01 MTR_1g052880 41.333 75 42 2 53 126 801 874 1.51e-11 60.5
MsG0680035379.01.T01 MTR_1g079520 48.438 64 32 1 45 108 856 918 1.67e-11 60.5
MsG0680035379.01.T01 MTR_3g020280 45.455 88 40 3 43 126 588 671 1.72e-11 60.5
MsG0680035379.01.T01 MTR_0280s0040 47.541 61 31 1 48 108 582 641 1.82e-11 60.5
MsG0680035379.01.T01 MTR_1g015530 43.243 74 41 1 53 126 746 818 1.83e-11 60.5
MsG0680035379.01.T01 MTR_2g038675 44.286 70 38 1 43 112 198 266 1.95e-11 60.1
MsG0680035379.01.T01 MTR_8g052170 43.421 76 39 3 53 126 131 204 1.98e-11 60.1
MsG0680035379.01.T01 MTR_1g015530 43.243 74 41 1 53 126 717 789 2.01e-11 60.1
MsG0680035379.01.T01 MTR_8g052120 44.737 76 38 3 53 126 550 623 2.03e-11 60.1
MsG0680035379.01.T01 MTR_3g117850 38.272 81 48 2 48 126 236 316 2.07e-11 60.1
MsG0680035379.01.T01 MTR_3g117850 38.272 81 48 2 48 126 266 346 2.09e-11 60.1
MsG0680035379.01.T01 MTR_5g087360 54.902 51 22 1 55 105 589 638 2.23e-11 60.1
MsG0680035379.01.T01 MTR_8g467150 46.154 65 34 1 44 108 533 596 2.28e-11 60.1
MsG0680035379.01.T01 MTR_8g059615 39.189 74 44 1 53 126 738 810 2.35e-11 60.1
MsG0680035379.01.T01 MTR_5g087360 54.902 51 22 1 55 105 789 838 2.35e-11 60.1
MsG0680035379.01.T01 MTR_5g087360 54.902 51 22 1 55 105 789 838 2.37e-11 60.1
MsG0680035379.01.T01 MTR_7g094100 42.169 83 47 1 44 126 374 455 2.50e-11 60.1
MsG0680035379.01.T01 MTR_7g094100 42.169 83 47 1 44 126 374 455 2.50e-11 60.1
MsG0680035379.01.T01 MTR_8g052290 42.105 76 40 3 53 126 184 257 2.67e-11 59.7
MsG0680035379.01.T01 MTR_8g059605 39.189 74 44 1 53 126 560 632 2.70e-11 59.7
MsG0680035379.01.T01 MTR_8g051600 43.421 76 39 3 53 126 568 641 2.78e-11 59.7
MsG0680035379.01.T01 MTR_3g088640 40.580 69 40 1 43 111 492 559 2.82e-11 59.7
MsG0680035379.01.T01 MTR_1g089600 44.595 74 40 1 53 126 394 466 2.83e-11 59.7
MsG0680035379.01.T01 MTR_2g046130 41.892 74 42 1 53 126 279 351 2.87e-11 59.7
MsG0680035379.01.T01 MTR_4g107620 44.156 77 38 2 52 126 408 481 2.94e-11 59.7
MsG0680035379.01.T01 MTR_3g020330 43.617 94 44 4 37 126 535 623 3.08e-11 59.7
MsG0680035379.01.T01 MTR_8g059605 39.189 74 44 1 53 126 755 827 3.09e-11 59.7
MsG0680035379.01.T01 MTR_4g130210 39.241 79 47 1 48 126 316 393 3.12e-11 59.7
MsG0680035379.01.T01 MTR_7g058530 44.286 70 38 1 53 122 602 670 3.24e-11 59.7
MsG0680035379.01.T01 MTR_5g091380 40.541 74 43 1 53 126 278 350 3.28e-11 59.7
MsG0680035379.01.T01 MTR_8g008820 38.095 84 50 2 44 126 170 252 3.35e-11 59.3
MsG0680035379.01.T01 MTR_7g058840 45.312 64 34 1 53 116 178 240 3.50e-11 58.9
MsG0680035379.01.T01 MTR_8g052060 43.421 76 39 3 53 126 536 609 3.59e-11 59.3
MsG0680035379.01.T01 MTR_8g442310 43.421 76 39 3 53 126 529 602 3.59e-11 59.3
MsG0680035379.01.T01 MTR_8g052200 43.421 76 39 3 53 126 557 630 3.67e-11 59.3
MsG0680035379.01.T01 MTR_3g117850 42.857 63 35 1 48 109 365 427 3.69e-11 59.3
MsG0680035379.01.T01 MTR_8g051640 43.421 76 39 3 53 126 542 615 3.73e-11 59.3
MsG0680035379.01.T01 MTR_5g031870 49.123 57 28 1 53 109 231 286 3.76e-11 59.3
MsG0680035379.01.T01 MTR_1g100787 44.595 74 40 1 53 126 1088 1160 3.77e-11 59.3
MsG0680035379.01.T01 MTR_1g040073 46.154 65 34 1 44 108 517 580 3.91e-11 59.3
MsG0680035379.01.T01 MTR_1g021642 41.026 78 38 3 53 126 451 524 3.98e-11 59.3
MsG0680035379.01.T01 MTR_5g017080 44.000 75 41 1 52 126 261 334 4.05e-11 59.3
MsG0680035379.01.T01 MTR_1g012550 50.000 58 28 1 51 108 593 649 4.23e-11 59.3
MsG0680035379.01.T01 MTR_8g052050 43.421 76 39 3 53 126 579 652 4.38e-11 59.3
MsG0680035379.01.T01 MTR_2g089440 51.786 56 26 1 53 108 594 648 4.55e-11 59.3
MsG0680035379.01.T01 MTR_2g089440 51.786 56 26 1 53 108 362 416 4.63e-11 58.9
MsG0680035379.01.T01 MTR_4g014350 46.269 67 32 2 45 108 499 564 4.69e-11 59.3
MsG0680035379.01.T01 MTR_1g064630 35.789 95 60 1 32 126 122 215 4.73e-11 58.9
MsG0680035379.01.T01 MTR_5g031870 46.667 60 31 1 50 109 223 281 5.06e-11 58.9
MsG0680035379.01.T01 MTR_3g090480 50.000 56 27 1 53 108 861 915 5.14e-11 58.9
MsG0680035379.01.T01 MTR_7g058830 46.875 64 33 1 53 116 604 666 5.21e-11 58.9
MsG0680035379.01.T01 MTR_8g442370 43.421 76 39 3 53 126 563 636 5.42e-11 58.9
MsG0680035379.01.T01 MTR_4g044393 51.786 56 26 1 53 108 628 682 5.76e-11 58.9
MsG0680035379.01.T01 MTR_2g095960 40.000 75 44 1 52 126 176 249 5.95e-11 58.5
MsG0680035379.01.T01 MTR_3g051420 47.436 78 33 3 53 126 558 631 6.01e-11 58.9
MsG0680035379.01.T01 MTR_8g052190 42.105 76 40 3 53 126 572 645 6.39e-11 58.9
MsG0680035379.01.T01 MTR_4g130210 39.241 79 47 1 48 126 382 459 6.55e-11 58.5
MsG0680035379.01.T01 MTR_8g041690 42.667 75 41 2 53 126 437 510 6.57e-11 58.5
MsG0680035379.01.T01 MTR_5g091950 34.375 96 61 2 32 126 616 710 6.57e-11 58.5
MsG0680035379.01.T01 MTR_8g052190 42.105 76 40 3 53 126 571 644 6.58e-11 58.5
MsG0680035379.01.T01 MTR_1g033010 40.260 77 45 1 50 126 668 743 6.93e-11 58.5
MsG0680035379.01.T01 MTR_5g091950 34.375 96 61 2 32 126 751 845 6.98e-11 58.5
MsG0680035379.01.T01 MTR_5g087340 51.724 58 21 2 53 107 857 910 7.04e-11 58.5
MsG0680035379.01.T01 MTR_3g102400 39.241 79 45 2 50 126 607 684 7.19e-11 58.5
MsG0680035379.01.T01 MTR_5g091950 34.375 96 61 2 32 126 661 755 7.27e-11 58.5
MsG0680035379.01.T01 MTR_3g019490 42.000 100 45 5 31 126 572 662 7.33e-11 58.5
MsG0680035379.01.T01 MTR_3g047890 40.541 74 43 1 53 126 276 348 7.47e-11 58.5
MsG0680035379.01.T01 MTR_7g078730 40.000 75 44 1 52 126 255 328 7.81e-11 58.5
MsG0680035379.01.T01 MTR_1g089570 41.333 75 42 2 53 126 210 283 7.84e-11 58.5
MsG0680035379.01.T01 MTR_8g052490 40.789 76 41 3 53 126 158 231 7.99e-11 58.2
MsG0680035379.01.T01 MTR_2g103950 40.541 74 43 1 53 126 135 207 8.15e-11 58.2
MsG0680035379.01.T01 MTR_8g465150 40.789 76 41 3 53 126 611 684 8.33e-11 58.5
MsG0680035379.01.T01 MTR_3g011930 43.590 78 36 3 53 126 290 363 8.34e-11 58.5
MsG0680035379.01.T01 MTR_4g129010 41.558 77 44 1 50 126 134 209 9.31e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0680035379.01.T01 AT5G56790 57.143 84 34 1 43 126 475 556 6.35e-26 101
MsG0680035379.01.T01 AT1G55200 51.807 83 40 0 44 126 463 545 8.66e-24 95.5
MsG0680035379.01.T01 AT1G55200 51.807 83 40 0 44 126 463 545 8.66e-24 95.5
MsG0680035379.01.T01 AT1G55200 51.807 83 40 0 44 126 463 545 8.66e-24 95.5
MsG0680035379.01.T01 AT1G55200 51.807 83 40 0 44 126 463 545 8.66e-24 95.5
MsG0680035379.01.T01 AT3G13690 51.807 83 40 0 44 126 495 577 2.27e-23 94.4
MsG0680035379.01.T01 AT3G13690 51.807 83 40 0 44 126 495 577 2.27e-23 94.4
MsG0680035379.01.T01 AT3G13690 51.807 83 40 0 44 126 495 577 2.27e-23 94.4
MsG0680035379.01.T01 AT1G49270 45.783 83 44 1 44 126 421 502 6.61e-16 73.2
MsG0680035379.01.T01 AT2G18890 44.304 79 42 2 49 126 160 237 1.84e-15 70.9
MsG0680035379.01.T01 AT2G18890 46.053 76 39 2 52 126 163 237 2.34e-15 71.2
MsG0680035379.01.T01 AT2G18890 44.304 79 42 2 49 126 160 237 3.04e-15 70.9
MsG0680035379.01.T01 AT3G14840 36.842 95 59 1 32 126 746 839 1.85e-14 68.9
MsG0680035379.01.T01 AT5G56890 46.914 81 40 2 48 126 813 892 2.39e-14 68.6
MsG0680035379.01.T01 AT3G24550 43.373 83 46 1 44 126 364 445 3.92e-14 67.8
MsG0680035379.01.T01 AT1G29750 35.789 95 60 1 32 126 755 848 4.46e-14 67.8
MsG0680035379.01.T01 AT1G21590 44.615 65 35 1 48 112 498 561 4.65e-14 67.8
MsG0680035379.01.T01 AT1G29750 35.789 95 60 1 32 126 740 833 4.82e-14 67.8
MsG0680035379.01.T01 AT1G21590 44.615 65 35 1 48 112 458 521 5.30e-14 67.8
MsG0680035379.01.T01 AT2G20300 45.946 74 39 1 53 126 439 511 8.39e-14 67.0
MsG0680035379.01.T01 AT1G29750 35.870 92 58 1 32 123 755 845 1.14e-13 66.6
MsG0680035379.01.T01 AT1G77280 45.312 64 34 1 48 111 493 555 1.39e-13 66.2
MsG0680035379.01.T01 AT1G77280 45.312 64 34 1 48 111 493 555 1.39e-13 66.2
MsG0680035379.01.T01 AT5G35960 45.333 75 39 2 53 126 226 299 2.00e-13 65.9
MsG0680035379.01.T01 AT5G35960 45.333 75 39 2 53 126 226 299 2.20e-13 65.9
MsG0680035379.01.T01 AT1G73080 45.455 77 34 3 53 126 923 994 2.33e-13 65.9
MsG0680035379.01.T01 AT3G09010 33.333 141 68 5 9 126 76 213 3.02e-13 65.1
MsG0680035379.01.T01 AT1G70530 43.038 79 44 1 48 126 412 489 3.99e-13 65.1
MsG0680035379.01.T01 AT1G70530 43.038 79 44 1 48 126 412 489 4.09e-13 65.1
MsG0680035379.01.T01 AT3G18810 43.373 83 46 1 44 126 421 502 4.41e-13 65.1
MsG0680035379.01.T01 AT2G18470 40.964 83 48 1 44 126 368 449 5.33e-13 64.7
MsG0680035379.01.T01 AT2G18470 40.964 83 48 1 44 126 368 449 5.45e-13 64.7
MsG0680035379.01.T01 AT2G18470 40.964 83 48 1 44 126 368 449 5.45e-13 64.7
MsG0680035379.01.T01 AT2G18470 40.964 83 48 1 44 126 368 449 5.45e-13 64.7
MsG0680035379.01.T01 AT1G10620 43.373 83 46 1 44 126 454 535 5.81e-13 64.7
MsG0680035379.01.T01 AT1G70530 50.820 61 29 1 48 108 412 471 6.95e-13 64.3
MsG0680035379.01.T01 AT1G56145 33.036 112 71 2 15 126 772 879 7.28e-13 64.3
MsG0680035379.01.T01 AT1G26150 45.946 74 39 1 53 126 523 595 8.13e-13 64.3
MsG0680035379.01.T01 AT1G26150 45.946 74 39 1 53 126 523 595 8.28e-13 64.3
MsG0680035379.01.T01 AT1G17750 43.243 74 40 2 53 126 890 961 8.95e-13 64.3
MsG0680035379.01.T01 AT3G09010 33.333 141 68 5 9 126 76 213 8.98e-13 63.9
MsG0680035379.01.T01 AT5G07280 47.297 74 38 1 53 126 1012 1084 1.26e-12 63.5
MsG0680035379.01.T01 AT1G53440 34.737 95 61 1 32 126 741 834 1.52e-12 63.5
MsG0680035379.01.T01 AT1G68690 40.000 95 53 3 32 126 451 541 1.75e-12 63.2
MsG0680035379.01.T01 AT1G68690 40.000 95 53 3 32 126 451 541 1.77e-12 63.2
MsG0680035379.01.T01 AT1G68690 40.000 95 53 3 32 126 451 541 1.77e-12 63.2
MsG0680035379.01.T01 AT1G68690 40.000 95 53 3 32 126 451 541 1.77e-12 63.2
MsG0680035379.01.T01 AT4G34440 43.373 83 46 1 44 126 396 477 1.79e-12 63.2
MsG0680035379.01.T01 AT4G34440 43.373 83 46 1 44 126 396 477 1.79e-12 63.2
MsG0680035379.01.T01 AT5G38560 38.144 97 55 3 32 126 413 506 1.81e-12 63.2
MsG0680035379.01.T01 AT5G01550 37.500 96 58 2 32 126 455 549 1.93e-12 63.2
MsG0680035379.01.T01 AT1G53420 35.789 95 60 1 32 126 698 791 2.02e-12 63.2
MsG0680035379.01.T01 AT1G56120 41.463 82 47 1 45 126 629 709 2.25e-12 63.2
MsG0680035379.01.T01 AT5G10520 46.032 63 27 2 53 112 247 305 2.32e-12 62.8
MsG0680035379.01.T01 AT1G53430 34.737 95 61 1 32 126 702 795 2.58e-12 62.8
MsG0680035379.01.T01 AT1G53430 34.737 95 61 1 32 126 743 836 2.59e-12 62.8
MsG0680035379.01.T01 AT3G59110 43.243 74 41 1 53 126 285 357 2.67e-12 62.8
MsG0680035379.01.T01 AT1G23540 42.169 83 47 1 44 126 455 536 2.74e-12 62.8
MsG0680035379.01.T01 AT1G23540 42.169 83 47 1 44 126 455 536 2.84e-12 62.8
MsG0680035379.01.T01 AT5G65710 50.877 57 27 1 52 108 785 840 3.35e-12 62.4
MsG0680035379.01.T01 AT1G70460 42.169 83 47 1 44 126 437 518 3.45e-12 62.4
MsG0680035379.01.T01 AT1G07650 38.824 85 48 2 45 126 550 633 3.66e-12 62.4
MsG0680035379.01.T01 AT5G48380 46.154 78 35 2 52 126 397 470 4.20e-12 62.0
MsG0680035379.01.T01 AT1G29740 41.463 82 47 1 45 126 762 842 4.32e-12 62.0
MsG0680035379.01.T01 AT1G07650 38.824 85 48 2 45 126 737 820 4.57e-12 62.0
MsG0680035379.01.T01 AT1G07650 38.824 85 48 2 45 126 763 846 4.58e-12 62.0
MsG0680035379.01.T01 AT1G07650 38.824 85 48 2 45 126 769 852 4.67e-12 62.0
MsG0680035379.01.T01 AT1G29740 41.463 82 47 1 45 126 762 842 5.22e-12 62.0
MsG0680035379.01.T01 AT1G70740 41.892 74 42 1 53 126 144 216 5.27e-12 61.6
MsG0680035379.01.T01 AT1G70740 41.892 74 42 1 53 126 156 228 5.27e-12 61.6
MsG0680035379.01.T01 AT5G65530 46.667 60 31 1 53 112 238 296 5.41e-12 61.6
MsG0680035379.01.T01 AT3G24240 44.578 83 44 2 45 126 880 961 5.94e-12 61.6
MsG0680035379.01.T01 AT1G79620 44.118 68 37 1 45 112 723 789 7.36e-12 61.6
MsG0680035379.01.T01 AT1G79620 44.118 68 37 1 45 112 723 789 7.48e-12 61.6
MsG0680035379.01.T01 AT1G79620 44.118 68 37 1 45 112 749 815 7.49e-12 61.6
MsG0680035379.01.T01 AT3G05140 36.957 92 39 2 36 109 201 291 7.98e-12 61.2
MsG0680035379.01.T01 AT3G05140 36.957 92 39 2 36 109 249 339 8.12e-12 61.2
MsG0680035379.01.T01 AT1G66980 44.615 65 35 1 44 108 871 934 8.23e-12 61.2
MsG0680035379.01.T01 AT1G66980 44.615 65 35 1 44 108 888 951 8.24e-12 61.2
MsG0680035379.01.T01 AT1G66980 44.615 65 35 1 44 108 917 980 8.26e-12 61.2
MsG0680035379.01.T01 AT5G57670 52.632 57 26 1 53 109 361 416 9.12e-12 61.2
MsG0680035379.01.T01 AT1G66980 44.615 65 35 1 44 108 915 978 9.27e-12 61.2
MsG0680035379.01.T01 AT1G56120 41.463 82 47 1 45 126 795 875 1.08e-11 61.2
MsG0680035379.01.T01 AT1G56720 41.892 74 42 1 53 126 274 346 1.12e-11 60.8
MsG0680035379.01.T01 AT1G56720 41.892 74 42 1 53 126 274 346 1.12e-11 60.8
MsG0680035379.01.T01 AT1G56720 41.892 74 42 1 53 126 274 346 1.12e-11 60.8
MsG0680035379.01.T01 AT1G56720 41.892 74 42 1 53 126 274 346 1.12e-11 60.8
MsG0680035379.01.T01 AT1G56120 41.463 82 47 1 45 126 777 857 1.13e-11 60.8
MsG0680035379.01.T01 AT2G32800 47.541 61 31 1 49 109 213 272 1.14e-11 60.8
MsG0680035379.01.T01 AT5G18910 41.333 75 42 2 53 126 284 357 1.22e-11 60.8
MsG0680035379.01.T01 AT1G66460 45.763 59 31 1 53 111 231 288 1.31e-11 60.8
MsG0680035379.01.T01 AT1G66460 45.763 59 31 1 53 111 258 315 1.33e-11 60.8
MsG0680035379.01.T01 AT1G56130 40.244 82 48 1 45 126 580 660 1.37e-11 60.8
MsG0680035379.01.T01 AT1G56130 40.244 82 48 1 45 126 631 711 1.38e-11 60.8
MsG0680035379.01.T01 AT5G10520 46.032 63 27 2 53 112 247 305 1.68e-11 60.5
MsG0680035379.01.T01 AT2G01820 41.333 75 43 1 52 126 682 755 1.77e-11 60.5
MsG0680035379.01.T01 AT2G42960 41.892 74 42 1 53 126 278 350 1.88e-11 60.1
MsG0680035379.01.T01 AT2G42960 41.892 74 42 1 53 126 278 350 1.88e-11 60.1
MsG0680035379.01.T01 AT2G42960 41.892 74 42 1 53 126 278 350 1.88e-11 60.1
MsG0680035379.01.T01 AT2G42960 41.892 74 42 1 53 126 278 350 1.88e-11 60.1
MsG0680035379.01.T01 AT4G02010 43.421 76 41 2 52 126 476 550 1.88e-11 60.5
MsG0680035379.01.T01 AT3G24540 39.759 83 49 1 44 126 267 348 1.89e-11 60.1
MsG0680035379.01.T01 AT1G29730 39.024 82 49 1 45 126 758 838 2.50e-11 60.1
MsG0680035379.01.T01 AT1G66460 42.857 63 35 1 53 115 258 319 2.79e-11 59.7
MsG0680035379.01.T01 AT1G29730 37.805 82 50 1 45 126 726 806 2.81e-11 59.7
MsG0680035379.01.T01 AT1G29730 39.024 82 49 1 45 126 758 838 2.85e-11 59.7
MsG0680035379.01.T01 AT5G37790 45.763 59 31 1 53 111 313 370 2.87e-11 59.7
MsG0680035379.01.T01 AT2G42960 40.506 79 46 1 48 126 273 350 2.91e-11 59.7
MsG0680035379.01.T01 AT3G26940 38.667 75 44 2 53 126 169 242 2.91e-11 59.7
MsG0680035379.01.T01 AT1G07870 42.105 76 42 2 52 126 198 272 2.93e-11 59.7
MsG0680035379.01.T01 AT1G56140 41.463 82 47 1 45 126 778 858 3.03e-11 59.7
MsG0680035379.01.T01 AT1G07870 42.105 76 42 2 52 126 198 272 3.06e-11 59.7
MsG0680035379.01.T01 AT2G11520 50.769 65 31 1 44 108 310 373 3.06e-11 59.7
MsG0680035379.01.T01 AT3G08870 33.333 96 62 2 32 126 463 557 3.08e-11 59.7
MsG0680035379.01.T01 AT4G03230 39.806 103 54 4 26 126 661 757 3.09e-11 59.7
MsG0680035379.01.T01 AT4G03230 39.806 103 54 4 26 126 661 757 3.09e-11 59.7
MsG0680035379.01.T01 AT4G03230 39.806 103 54 4 26 126 689 785 3.10e-11 59.7
MsG0680035379.01.T01 AT1G29730 37.805 82 50 1 45 126 726 806 3.29e-11 59.7
MsG0680035379.01.T01 AT4G03230 39.806 103 54 4 26 126 596 692 3.35e-11 59.7
MsG0680035379.01.T01 AT4G03230 39.806 103 54 4 26 126 604 700 3.38e-11 59.7
MsG0680035379.01.T01 AT3G08870 33.333 96 62 2 32 126 442 536 3.55e-11 59.7
MsG0680035379.01.T01 AT1G29720 36.471 85 53 1 42 126 755 838 3.75e-11 59.3
MsG0680035379.01.T01 AT1G71830 37.805 82 49 2 27 108 373 452 4.55e-11 59.3
MsG0680035379.01.T01 AT4G23280 44.872 78 35 3 53 126 388 461 5.11e-11 58.9
MsG0680035379.01.T01 AT4G23280 44.872 78 35 3 53 126 436 509 5.15e-11 58.9
MsG0680035379.01.T01 AT4G23280 44.872 78 35 3 53 126 438 511 5.15e-11 58.9
MsG0680035379.01.T01 AT4G27300 38.750 80 47 2 48 126 589 667 5.21e-11 58.9
MsG0680035379.01.T01 AT5G01560 38.462 78 46 2 32 108 438 514 5.38e-11 58.9
MsG0680035379.01.T01 AT3G17420 40.541 74 43 1 53 126 249 321 5.78e-11 58.9
MsG0680035379.01.T01 AT1G01540 41.026 78 45 1 49 126 245 321 6.63e-11 58.5
MsG0680035379.01.T01 AT1G60800 40.506 79 46 1 48 126 325 402 7.36e-11 58.5
MsG0680035379.01.T01 AT1G60800 40.506 79 46 1 48 126 392 469 7.47e-11 58.5

Find 22 sgRNAs with CRISPR-Local

Find 34 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCACTTAGGTGGCTGATTT+TGG 0.110662 6:+103914596 MsG0680035379.01.T01:intron
GATCGAGTTATGGGAAATTC+AGG 0.279364 6:+103914659 MsG0680035379.01.T01:CDS
ATTTGTTGTATATATTTAAC+AGG 0.362372 6:+103914316 MsG0680035379.01.T01:CDS
AAGTTTGATTTGATGTGATC+TGG 0.374646 6:-103914289 None:intergenic
AATACAGAAGATCGAGTTAT+GGG 0.411717 6:+103914650 MsG0680035379.01.T01:CDS
AGGCAGAGATAGTATACCTT+TGG 0.412223 6:+103914336 MsG0680035379.01.T01:CDS
AACCCATGACTTTGAACCTC+TGG 0.426562 6:+103914477 MsG0680035379.01.T01:CDS
AAACCAACTCTATAATCTTC+AGG 0.437374 6:-103914414 None:intergenic
CCTCCTGAAGATTATAGAGT+TGG 0.458920 6:+103914411 MsG0680035379.01.T01:CDS
GAGATAGTATACCTTTGGAT+TGG 0.475622 6:+103914341 MsG0680035379.01.T01:CDS
GTTCAAAGTCATGGGTTAAG+AGG 0.479428 6:-103914471 None:intergenic
AAATACAGAAGATCGAGTTA+TGG 0.487046 6:+103914649 MsG0680035379.01.T01:CDS
TCGCGGTTAAAGATAGTGAT+TGG 0.494177 6:+103914367 MsG0680035379.01.T01:CDS
GTACCAGAGGTTCAAAGTCA+TGG 0.517410 6:-103914480 None:intergenic
TTGCTAGATGGCAATCAGAA+TGG 0.557437 6:+103914621 MsG0680035379.01.T01:CDS
TACCAGAGGTTCAAAGTCAT+GGG 0.559551 6:-103914479 None:intergenic
ATCGAGTTATGGGAAATTCA+GGG 0.562656 6:+103914660 MsG0680035379.01.T01:CDS
CTCTATAATCTTCAGGAGGT+AGG 0.599465 6:-103914407 None:intergenic
TAGTGATTGGAGTTGCACAC+AGG 0.603415 6:+103914380 MsG0680035379.01.T01:CDS
AACCGCGAGTTCCAATCCAA+AGG 0.630918 6:-103914352 None:intergenic
TACCTTTGGATTGGAACTCG+CGG 0.657296 6:+103914350 MsG0680035379.01.T01:CDS
CCAACTCTATAATCTTCAGG+AGG 0.703217 6:-103914411 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAAATTGAAGTAAACTTT+TGG - Chr6:103914521-103914540 None:intergenic 15.0%
!!! ATTTGTTGTATATATTTAAC+AGG + Chr6:103914316-103914335 MsG0680035379.01.T01:CDS 15.0%
! TGAATGATTTACATTCACTT+AGG + Chr6:103914583-103914602 MsG0680035379.01.T01:intron 25.0%
AAACCAACTCTATAATCTTC+AGG - Chr6:103914417-103914436 None:intergenic 30.0%
AAATACAGAAGATCGAGTTA+TGG + Chr6:103914649-103914668 MsG0680035379.01.T01:CDS 30.0%
AATACAGAAGATCGAGTTAT+GGG + Chr6:103914650-103914669 MsG0680035379.01.T01:CDS 30.0%
ATGATTTACATTCACTTAGG+TGG + Chr6:103914586-103914605 MsG0680035379.01.T01:intron 30.0%
! TGGGTTAAGAGGATATTTTT+GGG - Chr6:103914463-103914482 None:intergenic 30.0%
!! AAGTTTGATTTGATGTGATC+TGG - Chr6:103914292-103914311 None:intergenic 30.0%
!! ATGGGTTAAGAGGATATTTT+TGG - Chr6:103914464-103914483 None:intergenic 30.0%
ATCGAGTTATGGGAAATTCA+GGG + Chr6:103914660-103914679 MsG0680035379.01.T01:CDS 35.0%
GAGATAGTATACCTTTGGAT+TGG + Chr6:103914341-103914360 MsG0680035379.01.T01:CDS 35.0%
! TTGAAGTAAACTTTTGGCCA+AGG - Chr6:103914515-103914534 None:intergenic 35.0%
AGGCAGAGATAGTATACCTT+TGG + Chr6:103914336-103914355 MsG0680035379.01.T01:CDS 40.0%
CCAACTCTATAATCTTCAGG+AGG - Chr6:103914414-103914433 None:intergenic 40.0%
CCTCCTGAAGATTATAGAGT+TGG + Chr6:103914411-103914430 MsG0680035379.01.T01:CDS 40.0%
CTCTATAATCTTCAGGAGGT+AGG - Chr6:103914410-103914429 None:intergenic 40.0%
GATCGAGTTATGGGAAATTC+AGG + Chr6:103914659-103914678 MsG0680035379.01.T01:CDS 40.0%
TACCAGAGGTTCAAAGTCAT+GGG - Chr6:103914482-103914501 None:intergenic 40.0%
TCGCGGTTAAAGATAGTGAT+TGG + Chr6:103914367-103914386 MsG0680035379.01.T01:CDS 40.0%
TTGCTAGATGGCAATCAGAA+TGG + Chr6:103914621-103914640 MsG0680035379.01.T01:CDS 40.0%
! GTTCAAAGTCATGGGTTAAG+AGG - Chr6:103914474-103914493 None:intergenic 40.0%
!! TCACTTAGGTGGCTGATTTT+GGG + Chr6:103914597-103914616 MsG0680035379.01.T01:intron 40.0%
!! TTCACTTAGGTGGCTGATTT+TGG + Chr6:103914596-103914615 MsG0680035379.01.T01:intron 40.0%
AACCCATGACTTTGAACCTC+TGG + Chr6:103914477-103914496 MsG0680035379.01.T01:CDS 45.0%
AAGGACTCAGTAAGTACCAG+AGG - Chr6:103914496-103914515 None:intergenic 45.0%
GTACCAGAGGTTCAAAGTCA+TGG - Chr6:103914483-103914502 None:intergenic 45.0%
TAGTGATTGGAGTTGCACAC+AGG + Chr6:103914380-103914399 MsG0680035379.01.T01:CDS 45.0%
TCTGGTACTTACTGAGTCCT+TGG + Chr6:103914495-103914514 MsG0680035379.01.T01:intron 45.0%
! TACCTTTGGATTGGAACTCG+CGG + Chr6:103914350-103914369 MsG0680035379.01.T01:CDS 45.0%
!!! CTGATTTTGGGCTTGCTAGA+TGG + Chr6:103914609-103914628 MsG0680035379.01.T01:CDS 45.0%
!! ATAATATCAATTATAAATAA+TGG + Chr6:103914554-103914573 MsG0680035379.01.T01:intron 5.0%
!! TAATATCAATTATAAATAAT+GGG + Chr6:103914555-103914574 MsG0680035379.01.T01:intron 5.0%
AACCGCGAGTTCCAATCCAA+AGG - Chr6:103914355-103914374 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
Chr6 gene 103914199 103914685 103914199 ID=MsG0680035379.01;Name=MsG0680035379.01
Chr6 mRNA 103914199 103914685 103914199 ID=MsG0680035379.01.T01;Parent=MsG0680035379.01;Name=MsG0680035379.01.T01;_AED=0.15;_eAED=0.16;_QI=0|0|0|1|1|1|2|0|126
Chr6 exon 103914199 103914498 103914199 ID=MsG0680035379.01.T01:exon:11138;Parent=MsG0680035379.01.T01
Chr6 exon 103914605 103914685 103914605 ID=MsG0680035379.01.T01:exon:11139;Parent=MsG0680035379.01.T01
Chr6 CDS 103914199 103914498 103914199 ID=MsG0680035379.01.T01:cds;Parent=MsG0680035379.01.T01
Chr6 CDS 103914605 103914685 103914605 ID=MsG0680035379.01.T01:cds;Parent=MsG0680035379.01.T01
Gene Sequence

>MsG0680035379.01.T01

ATGGTATTCACTAATTTTCTGCATTTGTCTTCAGCTTCTAATTTATATACAAGACTTTTCTATTTGTATCTGAATGTTCTTTGCAAATATCCAGATCACATCAAATCAAACTTTATCATTTGTTGTATATATTTAACAGGCAGAGATAGTATACCTTTGGATTGGAACTCGCGGTTAAAGATAGTGATTGGAGTTGCACACAGGCTTACCTACCTCCTGAAGATTATAGAGTTGGTTTGTATAGTGCACAGAGATATTAGACCCAAAAATATCCTCTTAACCCATGACTTTGAACCTCTGGTGGCTGATTTTGGGCTTGCTAGATGGCAATCAGAATGGAATATAAATACAGAAGATCGAGTTATGGGAAATTCAGGGTAA
Protein sequence

>MsG0680035379.01.T01

MVFTNFLHLSSASNLYTRLFYLYLNVLCKYPDHIKSNFIICCIYLTGRDSIPLDWNSRLKIVIGVAHRLTYLLKIIELVCIVHRDIRPKNILLTHDFEPLVADFGLARWQSEWNINTEDRVMGNSG*