AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780035923.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780035923.01.T01 MTR_7g005280 91.051 257 10 6 1 246 1 255 1.23e-152 425
MsG0780035923.01.T01 MTR_8g099750 59.669 181 61 4 1 171 1 179 9.80e-73 221
MsG0780035923.01.T01 MTR_3g098810 53.488 215 75 5 1 203 1 202 4.10e-69 213
MsG0780035923.01.T01 MTR_3g098810 63.816 152 51 3 1 149 1 151 5.64e-62 192
MsG0780035923.01.T01 MTR_4g089135 56.000 175 48 3 14 159 14 188 5.89e-60 193
MsG0780035923.01.T01 MTR_2g080010 54.545 176 63 3 1 159 1 176 5.69e-59 191
MsG0780035923.01.T01 MTR_7g085220 52.542 177 65 5 12 170 5 180 7.99e-59 190
MsG0780035923.01.T01 MTR_5g041940 58.228 158 54 3 13 160 1 156 9.14e-59 187
MsG0780035923.01.T01 MTR_4g081870 59.119 159 53 4 15 163 9 165 1.38e-58 187
MsG0780035923.01.T01 MTR_7g100990 50.802 187 80 4 12 186 8 194 7.38e-57 184
MsG0780035923.01.T01 MTR_3g088110 55.621 169 63 3 12 171 4 169 1.67e-55 179
MsG0780035923.01.T01 MTR_2157s0010 55.901 161 55 4 15 159 8 168 2.97e-55 178
MsG0780035923.01.T01 MTR_3g064580 57.988 169 59 6 13 171 4 170 1.06e-54 186
MsG0780035923.01.T01 MTR_2g064090 53.179 173 64 5 13 172 4 172 4.32e-54 177
MsG0780035923.01.T01 MTR_7g070140 86.813 91 12 0 60 150 12 102 4.49e-54 171
MsG0780035923.01.T01 MTR_2g093810 54.605 152 59 2 15 156 14 165 5.68e-54 177
MsG0780035923.01.T01 MTR_3g109340 52.532 158 71 2 12 165 19 176 5.76e-54 177
MsG0780035923.01.T01 MTR_4g036030 55.556 153 59 4 15 160 7 157 7.38e-54 177
MsG0780035923.01.T01 MTR_4g108760 53.012 166 68 4 8 165 10 173 8.35e-54 177
MsG0780035923.01.T01 MTR_3g109340 52.201 159 71 2 12 165 19 177 9.77e-54 177
MsG0780035923.01.T01 MTR_5g076850 44.141 256 107 9 13 246 4 245 1.18e-53 183
MsG0780035923.01.T01 MTR_1g008740 51.111 180 76 4 12 185 24 197 1.55e-53 177
MsG0780035923.01.T01 MTR_1g008740 51.111 180 76 4 12 185 10 183 1.58e-53 176
MsG0780035923.01.T01 MTR_3g435150 49.425 174 78 3 6 171 7 178 7.08e-53 173
MsG0780035923.01.T01 MTR_2g062730 50.617 162 72 3 6 160 1 161 1.08e-52 174
MsG0780035923.01.T01 MTR_4g035590 56.863 153 56 5 15 160 8 157 1.32e-52 174
MsG0780035923.01.T01 MTR_2g078700 51.250 160 70 2 12 163 20 179 2.42e-52 174
MsG0780035923.01.T01 MTR_6g084430 44.076 211 104 5 12 210 2 210 2.57e-52 172
MsG0780035923.01.T01 MTR_6g477900 41.558 231 102 6 13 235 4 209 3.16e-52 169
MsG0780035923.01.T01 MTR_5g021710 47.849 186 85 5 15 193 8 188 3.35e-52 173
MsG0780035923.01.T01 MTR_5g012080 52.597 154 64 3 15 160 7 159 5.26e-52 172
MsG0780035923.01.T01 MTR_8g094580 51.111 180 71 5 11 179 3 176 1.14e-51 170
MsG0780035923.01.T01 MTR_2g079990 54.658 161 65 3 11 165 12 170 1.25e-51 171
MsG0780035923.01.T01 MTR_4g101680 50.920 163 71 3 14 169 6 166 2.46e-51 171
MsG0780035923.01.T01 MTR_8g076110 50.299 167 74 4 15 174 6 170 3.50e-51 169
MsG0780035923.01.T01 MTR_1g069805 45.263 190 90 4 15 193 10 196 4.16e-51 168
MsG0780035923.01.T01 MTR_6g012670 49.701 167 74 4 7 165 12 176 5.82e-51 169
MsG0780035923.01.T01 MTR_1g096430 50.617 162 71 3 15 169 7 166 8.07e-51 169
MsG0780035923.01.T01 MTR_8g059170 55.769 156 59 4 12 159 11 164 6.56e-50 166
MsG0780035923.01.T01 MTR_3g070030 51.205 166 70 5 9 165 13 176 1.45e-49 166
MsG0780035923.01.T01 MTR_3g096920 54.375 160 59 4 11 160 3 158 1.88e-49 164
MsG0780035923.01.T01 MTR_6g032770 46.667 180 82 3 8 179 11 184 3.29e-49 166
MsG0780035923.01.T01 MTR_5g040420 47.514 181 80 3 1 167 1 180 4.90e-49 166
MsG0780035923.01.T01 MTR_7g097090 52.055 146 66 2 15 157 10 154 5.47e-49 163
MsG0780035923.01.T01 MTR_5g090970 50.273 183 74 6 8 175 12 192 1.01e-48 163
MsG0780035923.01.T01 MTR_8g024480 46.512 172 72 3 7 160 7 176 1.09e-48 166
MsG0780035923.01.T01 MTR_8g467490 45.604 182 83 3 1 167 1 181 1.31e-48 165
MsG0780035923.01.T01 MTR_5g090970 50.000 184 74 6 8 175 12 193 3.96e-48 161
MsG0780035923.01.T01 MTR_7g070150 70.796 113 12 2 103 215 1 92 4.15e-48 154
MsG0780035923.01.T01 MTR_2g064470 46.032 189 76 7 12 190 8 180 7.38e-48 160
MsG0780035923.01.T01 MTR_7g085260 52.229 157 65 4 13 159 15 171 9.95e-48 162
MsG0780035923.01.T01 MTR_2g079990 46.561 189 65 3 11 165 12 198 3.71e-47 160
MsG0780035923.01.T01 MTR_4g098630 44.221 199 100 5 15 202 6 204 3.73e-47 159
MsG0780035923.01.T01 MTR_5g014300 48.428 159 72 2 11 159 2 160 5.25e-47 159
MsG0780035923.01.T01 MTR_3g116070 53.793 145 63 3 8 148 16 160 1.06e-46 159
MsG0780035923.01.T01 MTR_3g096140 47.647 170 73 5 15 173 7 171 2.17e-46 156
MsG0780035923.01.T01 MTR_2g068880 43.350 203 93 5 10 191 16 217 3.07e-46 156
MsG0780035923.01.T01 MTR_7g011130 47.191 178 71 5 9 165 13 188 3.49e-46 157
MsG0780035923.01.T01 MTR_7g011120 48.555 173 70 5 9 165 2 171 4.30e-46 156
MsG0780035923.01.T01 MTR_3g096140 48.214 168 71 5 17 173 9 171 1.54e-45 156
MsG0780035923.01.T01 MTR_3g093040 45.349 172 77 4 13 176 106 268 1.89e-45 154
MsG0780035923.01.T01 MTR_3g093050 46.154 182 78 5 15 188 22 191 2.46e-45 160
MsG0780035923.01.T01 MTR_3g093050 46.154 182 78 5 15 188 22 191 4.40e-45 159
MsG0780035923.01.T01 MTR_3g096920 58.519 135 48 3 11 141 3 133 5.43e-45 154
MsG0780035923.01.T01 MTR_5g069030 45.455 187 82 5 14 192 24 198 8.42e-45 159
MsG0780035923.01.T01 MTR_2g068920 46.857 175 71 5 6 160 13 185 1.19e-44 152
MsG0780035923.01.T01 MTR_6g011860 46.552 174 77 4 1 159 1 173 1.20e-44 154
MsG0780035923.01.T01 MTR_3g070040 46.951 164 78 3 9 165 2 163 4.89e-44 151
MsG0780035923.01.T01 MTR_0036s0150 48.795 166 73 5 17 173 7 169 2.47e-43 154
MsG0780035923.01.T01 MTR_1g090720 50.888 169 65 4 15 168 42 207 3.40e-43 152
MsG0780035923.01.T01 MTR_1g090723 47.590 166 76 4 17 173 10 173 6.22e-43 154
MsG0780035923.01.T01 MTR_1g097300 48.810 168 70 5 17 173 21 183 7.97e-43 153
MsG0780035923.01.T01 MTR_1g090723 47.273 165 77 4 17 173 10 172 1.33e-42 152
MsG0780035923.01.T01 MTR_1g090723 47.273 165 77 4 17 173 10 172 1.61e-42 152
MsG0780035923.01.T01 MTR_8g063550 44.706 170 80 4 14 173 5 170 2.29e-42 147
MsG0780035923.01.T01 MTR_8g063550 44.706 170 80 4 14 173 5 170 5.63e-42 148
MsG0780035923.01.T01 MTR_8g063550 44.706 170 80 4 14 173 5 170 8.99e-42 147
MsG0780035923.01.T01 MTR_8g093580 43.529 170 82 4 14 173 5 170 7.02e-40 144
MsG0780035923.01.T01 MTR_4g134460 47.403 154 74 4 17 166 56 206 1.78e-39 142
MsG0780035923.01.T01 MTR_2g086880 46.528 144 67 3 17 156 20 157 1.68e-38 140
MsG0780035923.01.T01 MTR_2g086880 46.528 144 67 3 17 156 20 157 1.99e-38 141
MsG0780035923.01.T01 MTR_8g023840 46.622 148 70 4 15 156 11 155 2.53e-38 138
MsG0780035923.01.T01 MTR_4g075980 43.558 163 83 4 1 159 4 161 1.03e-37 134
MsG0780035923.01.T01 MTR_4g094302 41.558 154 72 3 15 157 11 157 7.50e-36 126
MsG0780035923.01.T01 MTR_3g096140 45.098 153 68 5 32 173 3 150 1.55e-35 129
MsG0780035923.01.T01 MTR_4g094302 45.669 127 60 2 15 139 11 130 2.03e-34 121
MsG0780035923.01.T01 MTR_8g023860 41.333 150 79 4 14 157 11 157 4.98e-33 124
MsG0780035923.01.T01 MTR_8g023930 38.889 180 97 6 15 188 24 196 2.56e-31 120
MsG0780035923.01.T01 MTR_2g086690 41.509 159 75 6 16 158 5 161 6.59e-31 115
MsG0780035923.01.T01 MTR_4g052620 41.139 158 78 6 15 158 5 161 2.59e-30 114
MsG0780035923.01.T01 MTR_8g023900 38.983 177 95 6 18 188 196 365 5.96e-30 116
MsG0780035923.01.T01 MTR_8g023900 38.095 168 94 4 15 176 12 175 4.82e-29 114
MsG0780035923.01.T01 MTR_8g093790 40.506 158 72 6 13 167 8 146 1.69e-29 109
MsG0780035923.01.T01 MTR_8g094580 48.361 122 51 3 65 179 6 122 2.83e-29 110
MsG0780035923.01.T01 MTR_8g023880 37.037 189 90 7 15 182 7 187 8.53e-28 107
MsG0780035923.01.T01 MTR_7g105170 32.710 214 103 9 15 192 4 212 3.95e-27 105
MsG0780035923.01.T01 MTR_3g096400 33.533 167 77 7 13 157 5 159 7.10e-19 82.4
MsG0780035923.01.T01 MTR_7g083370 32.143 140 86 5 10 144 5 140 2.27e-18 79.3
MsG0780035923.01.T01 MTR_7g083360 34.586 133 78 6 10 137 5 133 9.05e-18 78.2
MsG0780035923.01.T01 MTR_7g083330 34.177 158 93 7 6 157 10 162 1.17e-17 79.0
MsG0780035923.01.T01 MTR_1g045470 34.722 144 81 5 23 155 13 154 4.21e-16 76.6
MsG0780035923.01.T01 MTR_5g061450 59.770 87 12 4 158 241 14 80 2.84e-15 69.3
MsG0780035923.01.T01 MTR_5g061420 66.197 71 12 3 158 225 14 75 1.27e-14 67.8
MsG0780035923.01.T01 MTR_2g014680 32.653 147 71 8 15 139 53 193 1.69e-12 66.2
MsG0780035923.01.T01 MTR_4g078875 31.973 147 77 7 15 141 48 191 3.05e-12 65.5
MsG0780035923.01.T01 MTR_4g088245 29.310 174 97 9 15 166 68 237 1.24e-11 63.9
MsG0780035923.01.T01 MTR_8g069160 30.822 146 79 7 15 141 68 210 2.94e-11 62.4
MsG0780035923.01.T01 MTR_2g090735 28.141 199 101 11 15 191 49 227 8.57e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780035923.01.T01 AT5G13180 56.627 249 91 6 1 235 1 246 5.53e-93 274
MsG0780035923.01.T01 AT2G33480 73.457 162 40 2 1 161 1 160 1.32e-86 258
MsG0780035923.01.T01 AT2G33480 72.561 164 40 2 1 161 1 162 1.95e-86 258
MsG0780035923.01.T01 AT1G61110 58.683 167 50 4 11 159 12 177 4.95e-59 190
MsG0780035923.01.T01 AT3G04070 55.882 170 59 4 6 159 1 170 1.47e-58 189
MsG0780035923.01.T01 AT1G69490 59.006 161 53 4 15 165 9 166 2.85e-58 186
MsG0780035923.01.T01 AT5G61430 55.357 168 65 5 6 165 7 172 6.08e-57 185
MsG0780035923.01.T01 AT1G77450 52.747 182 66 5 6 171 1 178 8.75e-57 182
MsG0780035923.01.T01 AT3G04070 51.613 186 58 4 6 159 1 186 3.20e-56 184
MsG0780035923.01.T01 AT5G39610 52.353 170 71 3 4 165 9 176 4.22e-56 181
MsG0780035923.01.T01 AT5G07680 54.938 162 63 4 12 165 14 173 4.49e-56 182
MsG0780035923.01.T01 AT5G07680 55.975 159 60 4 15 165 3 159 6.70e-56 181
MsG0780035923.01.T01 AT3G15510 57.595 158 50 3 19 159 21 178 2.40e-55 181
MsG0780035923.01.T01 AT1G65910 41.016 256 117 8 13 245 4 248 5.54e-55 186
MsG0780035923.01.T01 AT2G24430 53.704 162 70 2 9 165 10 171 9.94e-55 179
MsG0780035923.01.T01 AT2G24430 53.704 162 70 2 9 165 10 171 9.94e-55 179
MsG0780035923.01.T01 AT5G17260 54.321 162 63 3 13 165 4 163 1.99e-54 182
MsG0780035923.01.T01 AT1G33280 53.947 152 62 2 15 160 8 157 3.16e-54 177
MsG0780035923.01.T01 AT4G27410 52.096 167 72 3 12 172 11 175 4.60e-54 176
MsG0780035923.01.T01 AT3G03200 47.179 195 90 4 13 198 4 194 5.85e-54 181
MsG0780035923.01.T01 AT3G18400 54.088 159 66 4 12 165 2 158 8.94e-54 176
MsG0780035923.01.T01 AT1G12260 51.786 168 71 5 15 174 7 172 9.63e-54 177
MsG0780035923.01.T01 AT4G10350 54.839 155 59 4 15 160 9 161 1.61e-53 176
MsG0780035923.01.T01 AT1G54330 59.211 152 51 3 15 159 6 153 1.81e-53 175
MsG0780035923.01.T01 AT1G12260 53.165 158 65 4 15 165 7 162 3.29e-53 177
MsG0780035923.01.T01 AT1G62700 52.941 170 69 5 14 174 6 173 6.36e-53 176
MsG0780035923.01.T01 AT1G62700 52.941 170 69 5 14 174 6 173 6.36e-53 176
MsG0780035923.01.T01 AT1G76420 52.795 161 68 4 12 166 19 177 1.27e-52 174
MsG0780035923.01.T01 AT3G04060 55.484 155 60 4 13 159 18 171 1.54e-52 174
MsG0780035923.01.T01 AT2G18060 46.569 204 90 7 15 210 9 201 2.28e-52 174
MsG0780035923.01.T01 AT2G18060 46.569 204 90 7 15 210 9 201 2.28e-52 174
MsG0780035923.01.T01 AT5G53950 53.595 153 63 2 15 159 17 169 2.97e-52 174
MsG0780035923.01.T01 AT5G18270 54.194 155 62 3 13 159 19 172 4.18e-52 172
MsG0780035923.01.T01 AT5G66300 53.012 166 66 5 4 160 1 163 4.36e-52 171
MsG0780035923.01.T01 AT5G18270 54.194 155 62 3 13 159 19 172 8.31e-52 171
MsG0780035923.01.T01 AT1G01720 53.939 165 63 4 13 167 5 166 1.11e-51 170
MsG0780035923.01.T01 AT5G62380 54.777 157 58 6 13 160 5 157 1.19e-51 171
MsG0780035923.01.T01 AT5G62380 54.777 157 58 6 13 160 5 157 1.19e-51 171
MsG0780035923.01.T01 AT3G15170 51.923 156 67 3 12 159 17 172 1.50e-51 170
MsG0780035923.01.T01 AT4G27410 47.283 184 72 3 12 172 11 192 2.35e-51 170
MsG0780035923.01.T01 AT3G17730 52.258 155 64 3 13 159 4 156 2.49e-51 167
MsG0780035923.01.T01 AT4G36160 51.534 163 68 4 15 168 14 174 2.57e-51 171
MsG0780035923.01.T01 AT4G36160 51.534 163 68 4 15 168 10 170 3.12e-51 171
MsG0780035923.01.T01 AT4G36160 51.534 163 68 4 15 168 10 170 3.12e-51 171
MsG0780035923.01.T01 AT5G46590 51.899 158 66 3 11 159 2 158 4.09e-51 169
MsG0780035923.01.T01 AT1G33060 46.429 196 83 5 15 197 24 210 8.24e-51 176
MsG0780035923.01.T01 AT1G33060 46.429 196 83 5 15 197 24 210 9.08e-51 176
MsG0780035923.01.T01 AT1G52890 52.500 160 68 3 12 165 11 168 9.20e-51 168
MsG0780035923.01.T01 AT1G71930 51.974 152 64 3 15 159 9 158 1.34e-50 168
MsG0780035923.01.T01 AT1G71930 51.974 152 64 3 15 159 9 158 1.34e-50 168
MsG0780035923.01.T01 AT1G79580 50.625 160 72 2 7 160 9 167 1.48e-50 169
MsG0780035923.01.T01 AT1G79580 50.625 160 72 2 7 160 9 167 1.48e-50 169
MsG0780035923.01.T01 AT1G79580 50.625 160 72 2 7 160 9 167 1.48e-50 169
MsG0780035923.01.T01 AT1G79580 50.625 160 72 2 7 160 9 167 1.48e-50 169
MsG0780035923.01.T01 AT1G79580 50.625 160 72 2 7 160 9 167 1.48e-50 169
MsG0780035923.01.T01 AT3G12977 51.250 160 69 4 12 164 15 172 2.08e-50 166
MsG0780035923.01.T01 AT5G63790 46.860 207 89 5 2 197 37 233 3.03e-50 167
MsG0780035923.01.T01 AT2G46770 40.529 227 110 5 1 205 2 225 3.25e-50 168
MsG0780035923.01.T01 AT5G63790 46.860 207 89 5 2 197 47 243 3.75e-50 167
MsG0780035923.01.T01 AT3G29035 50.898 167 72 3 7 165 16 180 4.67e-50 166
MsG0780035923.01.T01 AT1G52880 54.321 162 58 3 19 164 21 182 1.55e-49 165
MsG0780035923.01.T01 AT3G10500 50.898 167 72 3 15 173 9 173 2.49e-49 170
MsG0780035923.01.T01 AT3G10480 52.469 162 66 3 15 167 27 186 4.59e-49 167
MsG0780035923.01.T01 AT3G10490 51.852 162 67 3 15 167 27 186 4.63e-49 161
MsG0780035923.01.T01 AT4G35580 44.651 215 89 6 15 218 9 204 5.70e-49 169
MsG0780035923.01.T01 AT4G35580 44.651 215 89 6 15 218 9 204 5.91e-49 169
MsG0780035923.01.T01 AT4G35580 44.651 215 89 6 15 218 9 204 6.06e-49 168
MsG0780035923.01.T01 AT3G15500 51.553 161 70 3 12 166 11 169 6.10e-49 164
MsG0780035923.01.T01 AT5G04410 52.096 167 70 3 15 173 9 173 6.37e-49 169
MsG0780035923.01.T01 AT4G17980 49.057 159 71 2 11 159 2 160 1.40e-48 161
MsG0780035923.01.T01 AT5G08790 46.226 212 84 7 12 197 4 211 1.70e-48 161
MsG0780035923.01.T01 AT4G17980 49.057 159 71 2 11 159 2 160 1.80e-48 162
MsG0780035923.01.T01 AT3G10480 52.174 161 67 3 15 167 27 185 6.09e-48 164
MsG0780035923.01.T01 AT3G61910 45.143 175 72 5 7 159 3 175 7.20e-48 161
MsG0780035923.01.T01 AT1G56010 47.853 163 73 4 12 164 16 176 9.11e-48 160
MsG0780035923.01.T01 AT2G33480 69.524 105 27 2 60 161 3 105 9.59e-48 157
MsG0780035923.01.T01 AT5G46590 51.034 145 65 2 11 150 2 145 1.26e-47 159
MsG0780035923.01.T01 AT5G39820 39.827 231 107 6 2 205 8 233 2.02e-47 160
MsG0780035923.01.T01 AT1G32770 46.471 170 70 4 10 160 11 178 2.34e-47 160
MsG0780035923.01.T01 AT3G10490 51.852 162 67 3 15 167 27 186 2.60e-47 163
MsG0780035923.01.T01 AT4G28530 47.305 167 68 4 14 161 9 174 7.42e-45 154
MsG0780035923.01.T01 AT1G26870 41.872 203 98 4 15 197 16 218 2.02e-44 154
MsG0780035923.01.T01 AT3G10480 43.590 195 66 3 15 167 27 219 3.96e-44 155
MsG0780035923.01.T01 AT1G32510 39.130 230 117 5 15 222 6 234 4.87e-44 150
MsG0780035923.01.T01 AT1G34190 49.701 167 70 5 17 173 18 180 7.65e-44 155
MsG0780035923.01.T01 AT1G34180 48.795 166 73 4 17 173 18 180 3.26e-43 152
MsG0780035923.01.T01 AT1G34180 48.795 166 73 4 17 173 18 180 1.86e-42 152
MsG0780035923.01.T01 AT3G49530 46.405 153 73 3 15 159 13 164 2.66e-42 149
MsG0780035923.01.T01 AT5G24590 47.059 170 71 5 15 170 13 177 3.78e-42 149
MsG0780035923.01.T01 AT3G49530 46.405 153 73 3 15 159 13 164 3.78e-42 149
MsG0780035923.01.T01 AT1G34180 45.506 178 73 4 17 173 18 192 4.54e-42 149
MsG0780035923.01.T01 AT5G64060 44.444 171 85 3 11 173 2 170 1.21e-41 145
MsG0780035923.01.T01 AT3G12910 47.826 161 64 5 17 157 23 183 1.57e-41 144
MsG0780035923.01.T01 AT5G09330 43.147 197 98 5 11 196 2 195 1.64e-41 148
MsG0780035923.01.T01 AT5G09330 43.147 197 98 5 11 196 2 195 1.64e-41 148
MsG0780035923.01.T01 AT5G09330 43.147 197 98 5 11 196 2 195 1.64e-41 148
MsG0780035923.01.T01 AT5G09330 43.147 197 98 5 11 196 2 195 1.64e-41 148
MsG0780035923.01.T01 AT5G09330 43.147 197 98 5 11 196 2 195 1.64e-41 148
MsG0780035923.01.T01 AT1G34180 45.506 178 73 4 17 173 18 192 1.92e-41 149
MsG0780035923.01.T01 AT2G43000 49.324 148 66 4 17 157 20 165 2.08e-41 143
MsG0780035923.01.T01 AT2G17040 48.980 147 69 3 17 159 8 152 2.16e-41 143
MsG0780035923.01.T01 AT2G02450 49.333 150 70 4 17 162 53 200 1.45e-40 143
MsG0780035923.01.T01 AT2G02450 49.333 150 70 4 17 162 53 200 2.26e-40 144
MsG0780035923.01.T01 AT5G22290 36.406 217 128 4 17 228 23 234 7.94e-39 138
MsG0780035923.01.T01 AT2G27300 44.521 146 71 3 15 156 14 153 9.68e-37 132
MsG0780035923.01.T01 AT3G44290 42.236 161 80 4 17 173 16 167 1.34e-36 129
MsG0780035923.01.T01 AT5G04395 44.828 145 63 2 12 139 25 169 9.30e-36 125
MsG0780035923.01.T01 AT3G44290 42.236 161 80 4 17 173 16 167 9.83e-36 130
MsG0780035923.01.T01 AT4G10350 56.566 99 38 2 65 160 18 114 2.82e-35 127
MsG0780035923.01.T01 AT5G61430 56.604 106 39 3 65 165 6 109 2.28e-34 124
MsG0780035923.01.T01 AT1G32870 45.000 180 83 6 4 173 1 174 3.57e-33 126
MsG0780035923.01.T01 AT1G32870 45.000 180 83 6 4 173 1 174 3.68e-33 126
MsG0780035923.01.T01 AT1G32870 45.000 180 83 6 4 173 37 210 6.48e-33 125
MsG0780035923.01.T01 AT5G64530 39.634 164 69 4 13 157 1 153 1.19e-32 118
MsG0780035923.01.T01 AT3G12977 55.340 103 40 3 66 164 19 119 4.98e-32 117
MsG0780035923.01.T01 AT5G64530 44.961 129 58 3 13 139 1 118 7.80e-32 115
MsG0780035923.01.T01 AT1G56010 49.524 105 45 2 66 164 7 109 1.77e-30 114
MsG0780035923.01.T01 AT5G14000 36.970 165 98 4 1 162 1 162 1.88e-29 110
MsG0780035923.01.T01 AT4G01550 36.813 182 99 5 18 192 7 179 2.76e-29 114
MsG0780035923.01.T01 AT1G02230 40.113 177 86 8 16 184 4 168 4.26e-29 112
MsG0780035923.01.T01 AT5G14000 38.312 154 90 3 1 151 1 152 6.79e-29 107
MsG0780035923.01.T01 AT5G50820 39.860 143 79 3 5 145 7 144 7.58e-28 105
MsG0780035923.01.T01 AT1G02250 42.105 152 76 5 16 159 4 151 2.64e-27 108
MsG0780035923.01.T01 AT4G01520 38.012 171 94 6 16 178 5 171 1.42e-26 105
MsG0780035923.01.T01 AT4G01540 38.462 169 92 6 18 178 7 171 2.42e-26 105
MsG0780035923.01.T01 AT4G01540 38.462 169 92 6 18 178 7 171 3.40e-26 105
MsG0780035923.01.T01 AT4G01540 40.000 165 85 7 18 174 7 165 3.47e-26 105
MsG0780035923.01.T01 AT4G01540 40.000 165 85 7 18 174 7 165 4.14e-26 106
MsG0780035923.01.T01 AT5G22380 38.462 156 79 5 18 158 8 161 4.76e-25 99.4
MsG0780035923.01.T01 AT3G44350 37.975 158 83 5 15 159 5 160 6.59e-25 99.4
MsG0780035923.01.T01 AT3G04420 38.411 151 82 5 16 159 4 150 5.06e-24 98.2
MsG0780035923.01.T01 AT3G04420 38.411 151 82 5 16 159 4 150 5.44e-24 99.0
MsG0780035923.01.T01 AT3G44350 39.568 139 73 4 15 144 5 141 5.49e-23 92.0
MsG0780035923.01.T01 AT4G28530 40.310 129 58 3 14 123 9 137 8.14e-23 95.1
MsG0780035923.01.T01 AT2G18060 42.276 123 58 5 90 210 2 113 4.63e-22 92.4
MsG0780035923.01.T01 AT1G02220 38.125 160 77 7 16 165 4 151 8.15e-22 93.6
MsG0780035923.01.T01 AT3G10490 50.575 87 37 2 85 167 2 86 1.67e-21 92.0
MsG0780035923.01.T01 AT3G10490 50.575 87 37 2 85 167 2 86 1.67e-21 92.0
MsG0780035923.01.T01 AT2G43000 49.412 85 37 3 77 157 5 87 2.39e-19 83.6
MsG0780035923.01.T01 AT1G01010 34.810 158 80 7 18 159 6 156 3.42e-17 80.5
MsG0780035923.01.T01 AT3G55210 33.143 175 85 8 15 166 11 176 1.67e-16 77.4
MsG0780035923.01.T01 AT5G22290 34.532 139 85 3 91 228 2 135 4.57e-16 75.5
MsG0780035923.01.T01 AT3G56530 35.032 157 87 7 12 158 49 200 2.60e-15 74.3
MsG0780035923.01.T01 AT5G41090 27.950 161 94 5 15 160 8 161 5.80e-14 69.3
MsG0780035923.01.T01 AT5G14000 50.000 62 31 0 1 62 1 62 2.60e-13 68.2
MsG0780035923.01.T01 AT4G29230 31.034 174 89 9 13 159 45 214 5.93e-13 68.2
MsG0780035923.01.T01 AT4G29230 31.034 174 89 9 13 159 46 215 6.11e-13 68.2
MsG0780035923.01.T01 AT1G28470 32.927 164 87 10 15 159 77 236 9.49e-13 67.0
MsG0780035923.01.T01 AT4G29230 31.034 174 89 9 13 159 46 215 1.11e-12 67.4
MsG0780035923.01.T01 AT5G56620 30.573 157 76 7 13 139 41 194 1.30e-11 64.3
MsG0780035923.01.T01 AT5G56620 30.573 157 76 7 13 139 41 194 1.48e-11 63.9
MsG0780035923.01.T01 AT5G56620 30.573 157 76 7 13 139 41 194 1.70e-11 63.9
MsG0780035923.01.T01 AT4G28500 30.303 165 91 8 15 159 59 219 4.64e-11 62.0
MsG0780035923.01.T01 AT3G04430 31.206 141 82 4 21 147 6 145 4.83e-11 60.8

Find 81 sgRNAs with CRISPR-Local

Find 114 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCATCCTCATCCTCTTT+TGG 0.172089 7:-105144 MsG0780035923.01.T01:CDS
TCTTAATGCCGACCTCATTT+TGG 0.179661 7:+105029 None:intergenic
TCGGTTCCCATTTGGGTATT+TGG 0.189837 7:+105727 None:intergenic
GTGAAGGAAGGAAGAGAAAA+AGG 0.209589 7:+106297 None:intergenic
CTGTTAGATCGGTTCCCATT+TGG 0.268180 7:+105719 None:intergenic
ATTTGGATTCTTATATTAGA+TGG 0.293501 7:+104938 None:intergenic
TAGACAGACCTAATAATAAA+AGG 0.323180 7:+105090 None:intergenic
TGTTAGATCGGTTCCCATTT+GGG 0.328133 7:+105720 None:intergenic
GAGCTACAAACTCTGGTTAC+TGG 0.339051 7:-105697 MsG0780035923.01.T01:CDS
ATCTTTGCAAGTCTGATCCT+TGG 0.370348 7:-105973 MsG0780035923.01.T01:CDS
TAATAAAAGGAAGGGGAGGG+GGG 0.378600 7:+105103 None:intergenic
ATAATAAAAGGAAGGGGAGG+GGG 0.381389 7:+105102 None:intergenic
AATAATAAAAGGAAGGGGAG+GGG 0.381566 7:+105101 None:intergenic
CCAAGCAGTTGCAGCAACTT+TGG 0.391601 7:-105339 MsG0780035923.01.T01:CDS
TCTTTGCAAGTCTGATCCTT+GGG 0.393386 7:-105972 MsG0780035923.01.T01:CDS
GAAAGGAAAGGAAAGGAAAA+GGG 0.399374 7:+106369 None:intergenic
AGAAAGGAAAGGAAAGGAAA+AGG 0.406342 7:+106368 None:intergenic
CAGTGGAATCACAAATGAAT+TGG 0.418146 7:-105199 MsG0780035923.01.T01:CDS
TTAAGCATTATTTCCAAAAG+AGG 0.440986 7:+105131 None:intergenic
AAAGAAGCCAAATACCCAAA+TGG 0.451382 7:-105734 MsG0780035923.01.T01:CDS
AATAAAAGGAAGGGGAGGGG+GGG 0.453171 7:+105104 None:intergenic
TCTGGTTACTGGAAAGCAAC+TGG 0.454286 7:-105686 MsG0780035923.01.T01:CDS
TCAAAGAGTCATGAAGTTGT+TGG 0.455914 7:-105641 MsG0780035923.01.T01:CDS
GACTTGCAAAGATCAACTTC+AGG 0.465462 7:+105983 None:intergenic
AAGATCAACTTCAGGAATGA+TGG 0.468508 7:+105991 None:intergenic
TTTCTATGATTTCTTGGCAC+AGG 0.468739 7:-105262 MsG0780035923.01.T01:CDS
TTGAAATGATAAAGAAAGAA+AGG 0.477487 7:+106352 None:intergenic
CTTCATCAGTTGGATGGAAA+CGG 0.481185 7:+106068 None:intergenic
AAGAAGCCAAATACCCAAAT+GGG 0.481949 7:-105733 MsG0780035923.01.T01:CDS
TTCCTCTCACTCCAACCCCT+TGG 0.484311 7:-105534 MsG0780035923.01.T01:intron
CCAAAGTTGCTGCAACTGCT+TGG 0.489565 7:+105339 None:intergenic
ACAACAAGTTCTTCATCAGT+TGG 0.490523 7:+106058 None:intergenic
CTCAAATTCAAGTTCAAAAG+TGG 0.493719 7:-105289 MsG0780035923.01.T01:CDS
TTTGTGATTCCACTGCTAGC+TGG 0.494748 7:+105207 None:intergenic
GAATAAAGAAAGGTGAAGGA+AGG 0.504180 7:+106285 None:intergenic
ATTATTTCCAAAAGAGGATG+AGG 0.507684 7:+105137 None:intergenic
GAATGATGGAAGCAGGTAAA+GGG 0.510410 7:+106005 None:intergenic
CAAGTTCTTCATCAGTTGGA+TGG 0.512113 7:+106062 None:intergenic
GGTTGGAGTGAGAGGAAGTG+AGG 0.514880 7:+105540 None:intergenic
GAAAGGAAAGGAAAAGGGCA+TGG 0.521133 7:+106374 None:intergenic
ACTGCTAGCTGGTGAGGAGG+AGG 0.524725 7:+105218 None:intergenic
ATCTCAAATGTCCCAAAATG+AGG 0.524855 7:-105041 MsG0780035923.01.T01:three_prime_UTR
AATAGAATAAAGAAAGGTGA+AGG 0.531185 7:+106281 None:intergenic
AGTTTGTAGCTCTGTTAGAT+CGG 0.532621 7:+105708 None:intergenic
GGAATGATGGAAGCAGGTAA+AGG 0.533367 7:+106004 None:intergenic
AAAGAAAGAAAGGAAAGGAA+AGG 0.541538 7:+106362 None:intergenic
GAATAGAATAGAATAAAGAA+AGG 0.542048 7:+106275 None:intergenic
ACTTCAGGAATGATGGAAGC+AGG 0.542259 7:+105998 None:intergenic
CAGACCTAATAATAAAAGGA+AGG 0.543501 7:+105094 None:intergenic
GACCAAGGGGTTGGAGTGAG+AGG 0.548262 7:+105532 None:intergenic
CTCATGGTTCAAGAACTGAT+TGG 0.548704 7:-105580 MsG0780035923.01.T01:CDS
AGAAAGACTGACCAAGGGGT+TGG 0.548887 7:+105523 None:intergenic
GTTGGATGGAAACGGAAACC+TGG 0.549587 7:+106076 None:intergenic
TTTGTCGCATATTTCTGAAG+AGG 0.550659 7:-105398 MsG0780035923.01.T01:CDS
TGTTCAATACTTGAAGCGTA+AGG 0.550952 7:-106038 MsG0780035923.01.T01:CDS
AGACCTAATAATAAAAGGAA+GGG 0.556819 7:+105095 None:intergenic
TCTAACAGAGCTACAAACTC+TGG 0.560803 7:-105704 MsG0780035923.01.T01:CDS
TTTCCAAAAGAGGATGAGGA+TGG 0.565330 7:+105141 None:intergenic
TCTGATCCTTGGGATTTACC+TGG 0.570788 7:-105962 MsG0780035923.01.T01:intron
GACCTAATAATAAAAGGAAG+GGG 0.571777 7:+105096 None:intergenic
GATTCCACTGCTAGCTGGTG+AGG 0.572585 7:+105212 None:intergenic
AAATTCAAGTTCAAAAGTGG+TGG 0.574345 7:-105286 MsG0780035923.01.T01:CDS
TCCTCCTCACCAGCTAGCAG+TGG 0.575561 7:-105216 MsG0780035923.01.T01:CDS
CGCATATTTCTGAAGAGGAG+AGG 0.580940 7:-105393 MsG0780035923.01.T01:CDS
TACAGAGGCAAACCACCTCA+TGG 0.581454 7:-105596 MsG0780035923.01.T01:CDS
ACAGAATCTCTTAAAAGGAG+GGG 0.595413 7:+104899 None:intergenic
ATGATAAAGAAAGAAAGGAA+AGG 0.603952 7:+106357 None:intergenic
TCCACTGCTAGCTGGTGAGG+AGG 0.609090 7:+105215 None:intergenic
CTAATAATAAAAGGAAGGGG+AGG 0.609660 7:+105099 None:intergenic
TACATACCAGGTAAATCCCA+AGG 0.614952 7:+105956 None:intergenic
TCAGTTCTTGAACCATGAGG+TGG 0.615010 7:+105584 None:intergenic
TAATAATAAAAGGAAGGGGA+GGG 0.617766 7:+105100 None:intergenic
CAAATGTCCCAAAATGAGGT+CGG 0.618561 7:-105037 MsG0780035923.01.T01:three_prime_UTR
GAACTTGTTTACCACACGAG+TGG 0.627379 7:-106192 MsG0780035923.01.T01:five_prime_UTR
GGTGAAGTGAGATTGCCACC+AGG 0.631641 7:-106094 MsG0780035923.01.T01:CDS
CAGTTGCAGCAACTTTGGTG+AGG 0.652051 7:-105334 MsG0780035923.01.T01:CDS
TAGGTGATATGGAACAAGAG+AGG 0.664397 7:-105772 MsG0780035923.01.T01:CDS
AAATGTCAAAGCCACTCGTG+TGG 0.666435 7:+106181 None:intergenic
ATATTTCTGAAGAGGAGAGG+TGG 0.674268 7:-105390 MsG0780035923.01.T01:CDS
CAATCAGTTCTTGAACCATG+AGG 0.707588 7:+105581 None:intergenic
GGATGGAAACGGAAACCTGG+TGG 0.721884 7:+106079 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAATTAATATTAATATGAA+TGG - Chr7:105830-105849 MsG0780035923.01.T01:intron 10.0%
!! AATATTAATATGAATGGAAT+TGG - Chr7:105836-105855 MsG0780035923.01.T01:intron 15.0%
!! ATATTAATATGAATGGAATT+GGG - Chr7:105837-105856 MsG0780035923.01.T01:intron 15.0%
!! TTATAAATGAAGAAAAGAAA+AGG + Chr7:105356-105375 None:intergenic 15.0%
!!! GAAAATAAAGAATTTTCATT+TGG + Chr7:106368-106387 None:intergenic 15.0%
!!! TGAATTTGTTTGTAATTTAA+AGG - Chr7:105795-105814 MsG0780035923.01.T01:intron 15.0%
!! AAAAGAAAAAGAAGATAAGA+TGG - Chr7:105143-105162 MsG0780035923.01.T01:CDS 20.0%
!! ATTTGGATTCTTATATTAGA+TGG + Chr7:106351-106370 None:intergenic 20.0%
!! ATTTGTTTGTAATTTAAAGG+TGG - Chr7:105798-105817 MsG0780035923.01.T01:intron 20.0%
!! GAATAGAATAGAATAAAGAA+AGG + Chr7:105014-105033 None:intergenic 20.0%
!! TTGAAATGATAAAGAAAGAA+AGG + Chr7:104937-104956 None:intergenic 20.0%
!!! GGATTAATTCTTTTTCTTTT+AGG - Chr7:105495-105514 MsG0780035923.01.T01:intron 20.0%
! AATAGAATAAAGAAAGGTGA+AGG + Chr7:105008-105027 None:intergenic 25.0%
! AGACCTAATAATAAAAGGAA+GGG + Chr7:106194-106213 None:intergenic 25.0%
! ATGATAAAGAAAGAAAGGAA+AGG + Chr7:104932-104951 None:intergenic 25.0%
! TAGACAGACCTAATAATAAA+AGG + Chr7:106199-106218 None:intergenic 25.0%
! TTAAGCATTATTTCCAAAAG+AGG + Chr7:106158-106177 None:intergenic 25.0%
!! ATGAATTTTGTGAAGAAGAA+TGG - Chr7:105171-105190 MsG0780035923.01.T01:CDS 25.0%
!! CTTTGCTACAACTTTTTAAT+GGG - Chr7:105052-105071 MsG0780035923.01.T01:three_prime_UTR 25.0%
!! CTTTTTGCAGAATGAAAATT+GGG - Chr7:105862-105881 MsG0780035923.01.T01:intron 25.0%
!! TCTTTTTGCAGAATGAAAAT+TGG - Chr7:105861-105880 MsG0780035923.01.T01:intron 25.0%
!!! TCTTTTTCTTTTAGGTGATA+TGG - Chr7:105503-105522 MsG0780035923.01.T01:intron 25.0%
AAAGAAAGAAAGGAAAGGAA+AGG + Chr7:104927-104946 None:intergenic 30.0%
ATTATTTCCAAAAGAGGATG+AGG + Chr7:106152-106171 None:intergenic 30.0%
CAGACCTAATAATAAAAGGA+AGG + Chr7:106195-106214 None:intergenic 30.0%
CCATTAAAAAGTTGTAGCAA+AGG + Chr7:105054-105073 None:intergenic 30.0%
GACCTAATAATAAAAGGAAG+GGG + Chr7:106193-106212 None:intergenic 30.0%
TAATAATAAAAGGAAGGGGA+GGG + Chr7:106189-106208 None:intergenic 30.0%
! AAATTCAAGTTCAAAAGTGG+TGG - Chr7:106000-106019 MsG0780035923.01.T01:CDS 30.0%
! CCTTTGCTACAACTTTTTAA+TGG - Chr7:105051-105070 MsG0780035923.01.T01:three_prime_UTR 30.0%
! CTCAAATTCAAGTTCAAAAG+TGG - Chr7:105997-106016 MsG0780035923.01.T01:CDS 30.0%
!!! AAAACTCTTGTTTTCTACAG+AGG - Chr7:105675-105694 MsG0780035923.01.T01:CDS 30.0%
AAAGAAAGAAAGACTGACCA+AGG + Chr7:105772-105791 None:intergenic 35.0%
AAAGAAGCCAAATACCCAAA+TGG - Chr7:105552-105571 MsG0780035923.01.T01:CDS 35.0%
AAGAAAGAAAGACTGACCAA+GGG + Chr7:105771-105790 None:intergenic 35.0%
AAGAAGCCAAATACCCAAAT+GGG - Chr7:105553-105572 MsG0780035923.01.T01:CDS 35.0%
AAGATCAACTTCAGGAATGA+TGG + Chr7:105298-105317 None:intergenic 35.0%
AATAATAAAAGGAAGGGGAG+GGG + Chr7:106188-106207 None:intergenic 35.0%
ACAACAAGTTCTTCATCAGT+TGG + Chr7:105231-105250 None:intergenic 35.0%
AGAAAGGAAAGGAAAGGAAA+AGG + Chr7:104921-104940 None:intergenic 35.0%
ATCTCAAATGTCCCAAAATG+AGG - Chr7:106245-106264 MsG0780035923.01.T01:five_prime_UTR 35.0%
CAGTGGAATCACAAATGAAT+TGG - Chr7:106087-106106 MsG0780035923.01.T01:CDS 35.0%
CTAATAATAAAAGGAAGGGG+AGG + Chr7:106190-106209 None:intergenic 35.0%
GAAAGGAAAGGAAAGGAAAA+GGG + Chr7:104920-104939 None:intergenic 35.0%
GAATAAAGAAAGGTGAAGGA+AGG + Chr7:105004-105023 None:intergenic 35.0%
TAGTACAAGTCATCATGTTC+CGG + Chr7:105448-105467 None:intergenic 35.0%
TCAAAGAGTCATGAAGTTGT+TGG - Chr7:105645-105664 MsG0780035923.01.T01:CDS 35.0%
TGAAGGAAGGAAGAGAAAAA+GGG + Chr7:104991-105010 None:intergenic 35.0%
TGTTCAATACTTGAAGCGTA+AGG - Chr7:105248-105267 MsG0780035923.01.T01:CDS 35.0%
TTTCTATGATTTCTTGGCAC+AGG - Chr7:106024-106043 MsG0780035923.01.T01:CDS 35.0%
! AGTTTGTAGCTCTGTTAGAT+CGG + Chr7:105581-105600 None:intergenic 35.0%
! CTCCCCTTCCTTTTATTATT+AGG - Chr7:106188-106207 MsG0780035923.01.T01:five_prime_UTR 35.0%
! GAAAAGAAAAGGTACATACC+AGG + Chr7:105345-105364 None:intergenic 35.0%
! GGTGGTTTTCTATGATTTCT+TGG - Chr7:106018-106037 MsG0780035923.01.T01:CDS 35.0%
! TTTGTCGCATATTTCTGAAG+AGG - Chr7:105888-105907 MsG0780035923.01.T01:intron 35.0%
AGAAAGAAAGACTGACCAAG+GGG + Chr7:105770-105789 None:intergenic 40.0%
AGTACAAGTCATCATGTTCC+GGG + Chr7:105447-105466 None:intergenic 40.0%
ATAATAAAAGGAAGGGGAGG+GGG + Chr7:106187-106206 None:intergenic 40.0%
ATCTTTGCAAGTCTGATCCT+TGG - Chr7:105313-105332 MsG0780035923.01.T01:CDS 40.0%
CAAATGTCCCAAAATGAGGT+CGG - Chr7:106249-106268 MsG0780035923.01.T01:five_prime_UTR 40.0%
CAAGTTCTTCATCAGTTGGA+TGG + Chr7:105227-105246 None:intergenic 40.0%
CAATCAGTTCTTGAACCATG+AGG + Chr7:105708-105727 None:intergenic 40.0%
CTACTGCAAACAATGTCATG+TGG - Chr7:105474-105493 MsG0780035923.01.T01:intron 40.0%
CTCATGGTTCAAGAACTGAT+TGG - Chr7:105706-105725 MsG0780035923.01.T01:CDS 40.0%
CTTCATCAGTTGGATGGAAA+CGG + Chr7:105221-105240 None:intergenic 40.0%
GACTTGCAAAGATCAACTTC+AGG + Chr7:105306-105325 None:intergenic 40.0%
GTGAAGGAAGGAAGAGAAAA+AGG + Chr7:104992-105011 None:intergenic 40.0%
TACATACCAGGTAAATCCCA+AGG + Chr7:105333-105352 None:intergenic 40.0%
TAGGTGATATGGAACAAGAG+AGG - Chr7:105514-105533 MsG0780035923.01.T01:intron 40.0%
TCTAACAGAGCTACAAACTC+TGG - Chr7:105582-105601 MsG0780035923.01.T01:CDS 40.0%
TCTTTGCAAGTCTGATCCTT+GGG - Chr7:105314-105333 MsG0780035923.01.T01:CDS 40.0%
TTTCCAAAAGAGGATGAGGA+TGG + Chr7:106148-106167 None:intergenic 40.0%
! AAAGGAAAGGAAAAGGGCAT+AGG + Chr7:104914-104933 None:intergenic 40.0%
! ATATTTCTGAAGAGGAGAGG+TGG - Chr7:105896-105915 MsG0780035923.01.T01:intron 40.0%
! CTTAATGCCGACCTCATTTT+GGG + Chr7:106259-106278 None:intergenic 40.0%
! GAATGATGGAAGCAGGTAAA+GGG + Chr7:105284-105303 None:intergenic 40.0%
! TCTTAATGCCGACCTCATTT+TGG + Chr7:106260-106279 None:intergenic 40.0%
! TGTTAGATCGGTTCCCATTT+GGG + Chr7:105569-105588 None:intergenic 40.0%
AAATGTCAAAGCCACTCGTG+TGG + Chr7:105108-105127 None:intergenic 45.0%
CACAGATATCGGACACAACA+TGG - Chr7:105402-105421 MsG0780035923.01.T01:CDS 45.0%
GAGCTACAAACTCTGGTTAC+TGG - Chr7:105589-105608 MsG0780035923.01.T01:CDS 45.0%
GCACAGACAGACACAGATAT+CGG - Chr7:105391-105410 MsG0780035923.01.T01:CDS 45.0%
TAATAAAAGGAAGGGGAGGG+GGG + Chr7:106186-106205 None:intergenic 45.0%
TCAGTTCTTGAACCATGAGG+TGG + Chr7:105705-105724 None:intergenic 45.0%
TCGGTTCCCATTTGGGTATT+TGG + Chr7:105562-105581 None:intergenic 45.0%
TCTGATCCTTGGGATTTACC+TGG - Chr7:105324-105343 MsG0780035923.01.T01:CDS 45.0%
TCTGGTTACTGGAAAGCAAC+TGG - Chr7:105600-105619 MsG0780035923.01.T01:CDS 45.0%
TTTGTGATTCCACTGCTAGC+TGG + Chr7:106082-106101 None:intergenic 45.0%
! ACTTCAGGAATGATGGAAGC+AGG + Chr7:105291-105310 None:intergenic 45.0%
! AGGAGAGGTGGTGCTAAAAA+TGG - Chr7:105908-105927 MsG0780035923.01.T01:intron 45.0%
! AGGTGGTGCTAAAAATGGAG+AGG - Chr7:105913-105932 MsG0780035923.01.T01:intron 45.0%
! CGCATATTTCTGAAGAGGAG+AGG - Chr7:105893-105912 MsG0780035923.01.T01:intron 45.0%
! CTGTTAGATCGGTTCCCATT+TGG + Chr7:105570-105589 None:intergenic 45.0%
! CTTCCATCCTCATCCTCTTT+TGG - Chr7:106142-106161 MsG0780035923.01.T01:exon 45.0%
! GAACTTGTTTACCACACGAG+TGG - Chr7:105094-105113 MsG0780035923.01.T01:three_prime_UTR 45.0%
! GGAATGATGGAAGCAGGTAA+AGG + Chr7:105285-105304 None:intergenic 45.0%
AATAAAAGGAAGGGGAGGGG+GGG + Chr7:106185-106204 None:intergenic 50.0%
AGAAAGACTGACCAAGGGGT+TGG + Chr7:105766-105785 None:intergenic 50.0%
CAGTTGCAGCAACTTTGGTG+AGG - Chr7:105952-105971 MsG0780035923.01.T01:intron 50.0%
CCAAAGTTGCTGCAACTGCT+TGG + Chr7:105950-105969 None:intergenic 50.0%
CCAAGCAGTTGCAGCAACTT+TGG - Chr7:105947-105966 MsG0780035923.01.T01:intron 50.0%
GTTGGATGGAAACGGAAACC+TGG + Chr7:105213-105232 None:intergenic 50.0%
TACAGAGGCAAACCACCTCA+TGG - Chr7:105690-105709 MsG0780035923.01.T01:CDS 50.0%
CACTGACACGTTCAGACACC+CGG - Chr7:105426-105445 MsG0780035923.01.T01:intron 55.0%
GATTCCACTGCTAGCTGGTG+AGG + Chr7:106077-106096 None:intergenic 55.0%
GGATGGAAACGGAAACCTGG+TGG + Chr7:105210-105229 None:intergenic 55.0%
GGTGAAGTGAGATTGCCACC+AGG - Chr7:105192-105211 MsG0780035923.01.T01:CDS 55.0%
GGTTGGAGTGAGAGGAAGTG+AGG + Chr7:105749-105768 None:intergenic 55.0%
TTCCTCTCACTCCAACCCCT+TGG - Chr7:105752-105771 MsG0780035923.01.T01:CDS 55.0%
ACTGCTAGCTGGTGAGGAGG+AGG + Chr7:106071-106090 None:intergenic 60.0%
GACCAAGGGGTTGGAGTGAG+AGG + Chr7:105757-105776 None:intergenic 60.0%
TCCACTGCTAGCTGGTGAGG+AGG + Chr7:106074-106093 None:intergenic 60.0%
TCCTCCTCACCAGCTAGCAG+TGG - Chr7:106070-106089 MsG0780035923.01.T01:CDS 60.0%
AAAAGGAAGGGGAGGGGGGG+TGG + Chr7:106182-106201 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 104914 106394 104914 ID=MsG0780035923.01;Name=MsG0780035923.01
Chr7 mRNA 104914 106394 104914 ID=MsG0780035923.01.T01;Parent=MsG0780035923.01;Name=MsG0780035923.01.T01;_AED=0.46;_eAED=0.46;_QI=248|1|1|1|1|1|3|217|248
Chr7 exon 104914 105436 104914 ID=MsG0780035923.01.T01:exon:2091;Parent=MsG0780035923.01.T01
Chr7 exon 105535 105791 105535 ID=MsG0780035923.01.T01:exon:2090;Parent=MsG0780035923.01.T01
Chr7 exon 105963 106394 105963 ID=MsG0780035923.01.T01:exon:2089;Parent=MsG0780035923.01.T01
Chr7 five_prime_UTR 106147 106394 106147 ID=MsG0780035923.01.T01:five_prime_utr;Parent=MsG0780035923.01.T01
Chr7 CDS 105963 106146 105963 ID=MsG0780035923.01.T01:cds;Parent=MsG0780035923.01.T01
Chr7 CDS 105535 105791 105535 ID=MsG0780035923.01.T01:cds;Parent=MsG0780035923.01.T01
Chr7 CDS 105131 105436 105131 ID=MsG0780035923.01.T01:cds;Parent=MsG0780035923.01.T01
Chr7 three_prime_UTR 104914 105130 104914 ID=MsG0780035923.01.T01:three_prime_utr;Parent=MsG0780035923.01.T01
Gene Sequence

>MsG0780035923.01.T01

ATGGAGAAGATGAATTTTGTGAAGAAGAATGGTGAAGTGAGATTGCCACCAGGTTTCCGTTTCCATCCAACTGATGAAGAACTTGTTGTTCAATACTTGAAGCGTAAGGTCTTCTCTTTCCCTTTACCTGCTTCCATCATTCCTGAAGTTGATCTTTGCAAGTCTGATCCTTGGGATTTACCTGGTGATATGGAACAAGAGAGGTACTTTTTCAGTACTAAAGAAGCCAAATACCCAAATGGGAACCGATCTAACAGAGCTACAAACTCTGGTTACTGGAAAGCAACTGGTTTAGACAAACAAATCATGAATTCAAAGAGTCATGAAGTTGTTGGTATGAAGAAAACTCTTGTTTTCTACAGAGGCAAACCACCTCATGGTTCAAGAACTGATTGGATCATGCATGAATATCGCCTCACTTCCTCTCACTCCAACCCCTTGAATGAAAATTGGGTTCTTTGTCGCATATTTCTGAAGAGGAGAGGTGGTGCTAAAAATGGAGAGGAGAGTGTGAAGCCAAGCAGTTGCAGCAACTTTGGTGAGGTGAAGAAGAACTCAGCTTCAAGCTCAAATTCAAGTTCAAAAGTGGTGGTTTTCTATGATTTCTTGGCACAGGAGAAGAACAATACTGATGCATCCTCCTCCTCACCAGCTAGCAGTGGAATCACAAATGAATTGGATGAACATGAAAATGAAGACAGCAGTAACTCACTTCCATCCTCATCCTCTTTTGGAAATAATGCTTAA
Protein sequence

>MsG0780035923.01.T01

MEKMNFVKKNGEVRLPPGFRFHPTDEELVVQYLKRKVFSFPLPASIIPEVDLCKSDPWDLPGDMEQERYFFSTKEAKYPNGNRSNRATNSGYWKATGLDKQIMNSKSHEVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLTSSHSNPLNENWVLCRIFLKRRGGAKNGEESVKPSSCSNFGEVKKNSASSSNSSSKVVVFYDFLAQEKNNTDASSSSPASSGITNELDEHENEDSSNSLPSSSSFGNNA*