AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780035956.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780035956.01.T01 MTR_7g006030 100.000 376 0 0 1 376 1 376 0.0 791
MsG0780035956.01.T01 MTR_1g116210 84.474 380 50 2 1 376 79 453 0.0 683
MsG0780035956.01.T01 MTR_3g110240 76.393 377 79 2 4 376 88 458 0.0 631
MsG0780035956.01.T01 MTR_1g007150 76.253 379 79 3 3 376 89 461 0.0 621
MsG0780035956.01.T01 MTR_7g085540 77.027 370 84 1 7 376 117 485 0.0 620
MsG0780035956.01.T01 MTR_8g014050 71.850 373 102 3 6 376 97 468 0.0 577
MsG0780035956.01.T01 MTR_2g099670 38.710 279 154 5 37 312 9 273 3.14e-62 207
MsG0780035956.01.T01 MTR_1g042280 39.100 289 157 6 31 316 6 278 3.75e-62 206
MsG0780035956.01.T01 MTR_4g126010 38.351 279 155 5 37 312 9 273 4.13e-62 206
MsG0780035956.01.T01 MTR_2g039930 37.993 279 156 5 37 312 9 273 1.54e-61 205
MsG0780035956.01.T01 MTR_1g075870 38.754 289 158 6 31 316 6 278 4.01e-61 200
MsG0780035956.01.T01 MTR_7g097160 38.516 283 157 5 37 316 9 277 4.42e-61 204
MsG0780035956.01.T01 MTR_1g075870 38.754 289 158 6 31 316 6 278 3.78e-60 201
MsG0780035956.01.T01 MTR_1g069720 37.716 289 161 6 31 316 5 277 1.89e-59 199
MsG0780035956.01.T01 MTR_8g018310 37.276 279 157 6 37 312 9 272 5.60e-59 198
MsG0780035956.01.T01 MTR_8g018310 36.749 283 161 6 37 316 9 276 1.25e-58 196
MsG0780035956.01.T01 MTR_6g087070 36.268 284 164 5 37 317 9 278 1.70e-57 193
MsG0780035956.01.T01 MTR_8g102930 36.735 294 166 7 27 317 2 278 3.56e-57 192
MsG0780035956.01.T01 MTR_1g042280 41.304 230 129 3 90 316 20 246 3.63e-56 186
MsG0780035956.01.T01 MTR_0492s0030 36.860 293 164 6 29 316 3 279 5.08e-56 188
MsG0780035956.01.T01 MTR_0543s0020 36.860 293 164 6 29 316 3 279 5.08e-56 188
MsG0780035956.01.T01 MTR_1g004990 35.439 285 165 6 31 312 5 273 9.59e-55 186
MsG0780035956.01.T01 MTR_3g110180 35.088 285 166 6 31 312 5 273 1.20e-54 186
MsG0780035956.01.T01 MTR_3g110180 35.088 285 165 7 31 312 5 272 5.53e-53 181
MsG0780035956.01.T01 MTR_2g099670 41.784 213 118 3 103 312 12 221 8.91e-53 181
MsG0780035956.01.T01 MTR_1g075870 40.541 222 126 3 98 316 3 221 3.90e-52 175
MsG0780035956.01.T01 MTR_2g039930 39.487 195 112 3 121 312 1 192 8.85e-45 159
MsG0780035956.01.T01 MTR_1g116205 73.737 99 17 2 1 95 79 172 1.48e-42 146
MsG0780035956.01.T01 MTR_7g097160 41.481 135 75 2 185 316 25 158 1.11e-28 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780035956.01.T01 AT3G13670 82.895 380 59 2 1 376 103 480 0.0 679
MsG0780035956.01.T01 AT2G25760 76.253 379 81 4 3 376 76 450 0.0 622
MsG0780035956.01.T01 AT2G25760 75.916 382 80 6 3 376 76 453 0.0 615
MsG0780035956.01.T01 AT5G18190 75.135 370 91 1 7 376 100 468 0.0 609
MsG0780035956.01.T01 AT5G18190 75.135 370 91 1 7 376 100 468 0.0 609
MsG0780035956.01.T01 AT3G03940 73.784 370 96 1 7 376 110 478 0.0 602
MsG0780035956.01.T01 AT2G19470 38.516 283 157 5 37 316 9 277 4.25e-62 206
MsG0780035956.01.T01 AT5G44100 38.754 289 158 6 31 316 5 277 1.59e-61 205
MsG0780035956.01.T01 AT5G44100 38.754 289 158 6 31 316 5 277 1.59e-61 205
MsG0780035956.01.T01 AT1G03930 38.596 285 156 6 31 312 5 273 2.31e-61 204
MsG0780035956.01.T01 AT3G23340 38.754 289 158 6 31 316 5 277 2.54e-61 204
MsG0780035956.01.T01 AT4G14340 38.408 289 159 6 31 316 11 283 8.00e-61 200
MsG0780035956.01.T01 AT4G14340 38.408 289 159 6 31 316 11 283 1.61e-60 202
MsG0780035956.01.T01 AT4G28540 38.062 289 160 6 31 316 9 281 1.72e-60 202
MsG0780035956.01.T01 AT4G26100 36.749 283 162 5 37 316 9 277 2.05e-60 201
MsG0780035956.01.T01 AT4G28860 37.543 293 163 7 27 316 2 277 5.47e-59 196
MsG0780035956.01.T01 AT4G28860 37.543 293 163 7 27 316 2 277 1.33e-58 196
MsG0780035956.01.T01 AT1G72710 37.276 279 157 6 37 312 9 272 1.45e-58 197
MsG0780035956.01.T01 AT1G04440 38.062 289 160 6 31 316 5 277 1.76e-58 197
MsG0780035956.01.T01 AT4G28880 37.884 293 162 7 27 316 2 277 1.85e-58 196
MsG0780035956.01.T01 AT4G28880 37.884 293 162 7 27 316 2 277 1.85e-58 196
MsG0780035956.01.T01 AT4G28880 37.884 293 162 7 27 316 2 277 1.85e-58 196
MsG0780035956.01.T01 AT4G28880 37.884 293 162 7 27 316 2 277 1.85e-58 196
MsG0780035956.01.T01 AT5G57015 36.042 283 164 5 37 316 9 277 2.08e-58 196
MsG0780035956.01.T01 AT5G43320 38.062 289 160 6 31 316 5 277 3.02e-58 197
MsG0780035956.01.T01 AT5G43320 38.062 289 160 6 31 316 5 277 4.63e-58 193
MsG0780035956.01.T01 AT5G43320 38.062 289 160 6 31 316 5 277 4.63e-58 193
MsG0780035956.01.T01 AT3G23340 39.245 265 151 5 57 316 4 263 7.64e-56 189
MsG0780035956.01.T01 AT4G08800 32.509 283 142 6 37 316 9 245 6.44e-44 154

Find 125 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAATTGGTAGGTTGAATT+TGG 0.163094 7:-527216 None:intergenic
TAGGTTGAATTTGGAGAATT+AGG 0.195629 7:-527207 None:intergenic
CTTCCTTTATAATGTACTTT+AGG 0.233162 7:-529006 None:intergenic
CATCTCTACCTTTGCTTCAT+TGG 0.235235 7:-531030 None:intergenic
AAAAGAAACCTGAACATATC+AGG 0.258582 7:-530268 None:intergenic
TGAGCACCTTCAGTATTAAT+TGG 0.274374 7:-530770 None:intergenic
GGTGGTAATGACCGTCTTAA+TGG 0.277319 7:+528644 MsG0780035956.01.T01:CDS
AAACTTGGCAAAGGTGGATT+TGG 0.289497 7:+528593 MsG0780035956.01.T01:CDS
TCTTCTCTTACCAAGTTATC+AGG 0.290272 7:-527497 None:intergenic
TGCAAGTGTTCATGCTCATT+TGG 0.304706 7:+530369 MsG0780035956.01.T01:CDS
GAATTTGGAGAATTAGGGTT+AGG 0.322608 7:-527201 None:intergenic
AACAGTAAAGGTTGCAACTA+TGG 0.325296 7:+528794 MsG0780035956.01.T01:CDS
GTTACCATGGCAAGGTTATC+AGG 0.332076 7:+530462 MsG0780035956.01.T01:CDS
TTTCTTGTTGATCTCGGATT+AGG 0.333361 7:+530111 MsG0780035956.01.T01:CDS
GTCCAAGCTTGTGGGATGTT+TGG 0.336979 7:+529158 MsG0780035956.01.T01:CDS
TTTGTTGGTCGTCGAGTAAC+CGG 0.359465 7:+528623 MsG0780035956.01.T01:CDS
TTCTTCTCTTGTGCTGTACC+TGG 0.364237 7:-530084 None:intergenic
ATTGGCCGCAGTGCAGGATT+TGG 0.366177 7:-530752 None:intergenic
AGCAATGCATGCCACCATTT+CGG 0.376237 7:-529873 None:intergenic
CCGTGATAGCGGCACAAGTT+TGG 0.378481 7:-527428 None:intergenic
AGGTTGAATTTGGAGAATTA+GGG 0.387890 7:-527206 None:intergenic
GCAAGTGTTCATGCTCATTT+GGG 0.388698 7:+530370 MsG0780035956.01.T01:CDS
CAGAAGCAGCATAGCATCTC+AGG 0.394079 7:-530626 None:intergenic
ATACCTAAAGTACATTATAA+AGG 0.411632 7:+529003 MsG0780035956.01.T01:CDS
GGCTCAAATATCTCAATAAC+CGG 0.418799 7:-527476 None:intergenic
GATATTTGAGCCTGATAACT+TGG 0.421167 7:+527487 MsG0780035956.01.T01:five_prime_UTR
GATATTAGCTTGGAATAGTT+AGG 0.422192 7:-530707 None:intergenic
ATTGATATCCATTGTGTAGC+AGG 0.425137 7:-530991 None:intergenic
ACACATACCCTCTCAGGAAA+AGG 0.427758 7:-527611 None:intergenic
GATAACCTTGCCATGGTAAC+CGG 0.435532 7:-530459 None:intergenic
ACCAGCGCCCTGATATGTTC+AGG 0.437919 7:+530260 MsG0780035956.01.T01:CDS
TTAGGGTTAGGGTTTGATGC+AGG 0.440418 7:-527189 None:intergenic
TTCAAAGTGGAGAGGAAACT+TGG 0.443586 7:+528578 MsG0780035956.01.T01:CDS
CACATACCCTCTCAGGAAAA+GGG 0.446418 7:-527610 None:intergenic
GAAGAGGTAGAAGAAATTGA+AGG 0.450955 7:+527515 MsG0780035956.01.T01:five_prime_UTR
GTATTAATTGGCCGCAGTGC+AGG 0.451258 7:-530758 None:intergenic
CAGCATACCTCAGTGGCACC+GGG 0.458135 7:-528668 None:intergenic
TAATACTGAAGGTGCTCAAA+AGG 0.460450 7:+530775 MsG0780035956.01.T01:CDS
TCAGCATACCTCAGTGGCAC+CGG 0.460949 7:-528669 None:intergenic
TCCTTGTTTGATAGTGTGCT+TGG 0.461993 7:+530728 MsG0780035956.01.T01:CDS
TGTGGAGTCATTGTCGATCT+TGG 0.469974 7:+529895 MsG0780035956.01.T01:CDS
AATCAACGCACACGATGATC+AGG 0.469979 7:+527318 MsG0780035956.01.T01:five_prime_UTR
AAATTGTTTCTTGTTGATCT+CGG 0.470903 7:+530105 MsG0780035956.01.T01:CDS
TTCATTATAGATATGTGCAT+GGG 0.475655 7:+530028 MsG0780035956.01.T01:intron
ATGTAGGATGTCTGCCGAAA+TGG 0.477227 7:+529859 MsG0780035956.01.T01:intron
AATTTGGAGAATTAGGGTTA+GGG 0.484069 7:-527200 None:intergenic
GAGAGGTAGATTGAATATTG+AGG 0.484728 7:+530924 MsG0780035956.01.T01:CDS
TGGCAAAGGTGGATTTGGAC+AGG 0.492641 7:+528598 MsG0780035956.01.T01:CDS
TTCCAAACATCCCACAAGCT+TGG 0.493712 7:-529160 None:intergenic
AGAAGAAATTGAAGGGGTGA+TGG 0.494085 7:+527523 MsG0780035956.01.T01:exon
CATAGGACACATACCCTCTC+AGG 0.494559 7:-527617 None:intergenic
GGAGCAGGACGACGAAGTAC+TGG 0.504517 7:-527388 None:intergenic
ATCAAACAAGGATATTAGCT+TGG 0.504809 7:-530717 None:intergenic
AGGAAATGTCTGAAAGGAGT+AGG 0.507896 7:-530650 None:intergenic
AAGAGGTAGAAGAAATTGAA+GGG 0.508434 7:+527516 MsG0780035956.01.T01:five_prime_UTR
GAACACATGCAGTAGATTTG+TGG 0.509091 7:-527357 None:intergenic
CATGCTTGGTCCAAGCTTGT+GGG 0.512086 7:+529150 MsG0780035956.01.T01:CDS
TTCCTCTCCACTTTGAACAT+AGG 0.519828 7:-528572 None:intergenic
AGTACTTCGTCGTCCTGCTC+CGG 0.521539 7:+527390 MsG0780035956.01.T01:five_prime_UTR
AGCACCCTTGGTGGAAGTCA+TGG 0.521686 7:+528979 MsG0780035956.01.T01:intron
AGGTGTTGCTCAAGAGGATG+AGG 0.525431 7:+527577 MsG0780035956.01.T01:CDS
CCAAACTTGTGCCGCTATCA+CGG 0.529396 7:+527428 MsG0780035956.01.T01:five_prime_UTR
ACCTGAACATATCAGGGCGC+TGG 0.539965 7:-530261 None:intergenic
GGTGGTTTGAGTGCTAATAA+AGG 0.540456 7:+527557 MsG0780035956.01.T01:CDS
TAATAAAGGTGTTGCTCAAG+AGG 0.543294 7:+527571 MsG0780035956.01.T01:CDS
TTCATAAAGGCCGGTTACCA+TGG 0.544662 7:+530449 MsG0780035956.01.T01:CDS
ATGCAGGTTATGGACATGCT+TGG 0.546212 7:+529136 MsG0780035956.01.T01:intron
GAAGAAATTGAAGGGGTGAT+GGG 0.548399 7:+527524 MsG0780035956.01.T01:exon
GACCCAAAGGTTCAAGTAGG+AGG 0.548405 7:+528545 MsG0780035956.01.T01:intron
TTTGAACATAGAAACAGTAA+AGG 0.551586 7:+528782 MsG0780035956.01.T01:CDS
TGGGATGTTTGGAATACCAC+AGG 0.555511 7:+529169 MsG0780035956.01.T01:CDS
TCTTGGAGAAGATGCACTCA+AGG 0.557515 7:+529912 MsG0780035956.01.T01:CDS
GAGAGGAAACTTGGCAAAGG+TGG 0.562906 7:+528587 MsG0780035956.01.T01:CDS
GTTCATTATAGATATGTGCA+TGG 0.563871 7:+530027 MsG0780035956.01.T01:intron
ACATGCTTGGTCCAAGCTTG+TGG 0.566277 7:+529149 MsG0780035956.01.T01:CDS
ATTAAGACGGTCATTACCAC+CGG 0.568388 7:-528642 None:intergenic
TTGTACACTTGCCACTCGTA+AGG 0.569716 7:-528821 None:intergenic
AATGACCGTCTTAATGGCCC+CGG 0.574417 7:+528650 MsG0780035956.01.T01:CDS
TACACTTGCCACTCGTAAGG+AGG 0.576490 7:-528818 None:intergenic
TTTGACCCAAAGGTTCAAGT+AGG 0.576801 7:+528542 MsG0780035956.01.T01:intron
TGATAACTTGGTAAGAGAAG+AGG 0.576856 7:+527499 MsG0780035956.01.T01:five_prime_UTR
TGTTTGGAATACCACAGGCC+AGG 0.580670 7:+529174 MsG0780035956.01.T01:CDS
AACTCAAGGAAATGTCTGAA+AGG 0.580963 7:-530656 None:intergenic
TCATGTTCACTACAAACTCA+AGG 0.582669 7:-530670 None:intergenic
GTGTTCATGCTCATTTGGGA+AGG 0.584104 7:+530374 MsG0780035956.01.T01:CDS
GGGGTGATGGGTGATGAAAG+TGG 0.587284 7:+527536 MsG0780035956.01.T01:exon
TAATGGCCCCGGTGCCACTG+AGG 0.587700 7:+528661 MsG0780035956.01.T01:CDS
TGGCACCGGGGCCATTAAGA+CGG 0.592504 7:-528655 None:intergenic
AGAGGTAGAAGAAATTGAAG+GGG 0.594831 7:+527517 MsG0780035956.01.T01:five_prime_UTR
CAAGAATGCCAATGAAGCAA+AGG 0.595613 7:+531022 MsG0780035956.01.T01:CDS
GGAAATGTCTGAAAGGAGTA+GGG 0.595669 7:-530649 None:intergenic
CTTGGAGAAGATGCACTCAA+GGG 0.598220 7:+529913 MsG0780035956.01.T01:CDS
CTGCGGCCAATTAATACTGA+AGG 0.599700 7:+530764 MsG0780035956.01.T01:CDS
AAGTGGAGAGACACCTCCAC+TGG 0.602028 7:+530220 MsG0780035956.01.T01:CDS
AAAGAAACCTGAACATATCA+GGG 0.602522 7:-530267 None:intergenic
TACCAGGTCGGGCAAAAGAG+AGG 0.609022 7:+530907 MsG0780035956.01.T01:intron
CGCCTATGTTCAAAGTGGAG+AGG 0.617102 7:+528570 MsG0780035956.01.T01:CDS
TATTCCATGACTTCCACCAA+GGG 0.620145 7:-528983 None:intergenic
TTATACTCACGCCTGGCCTG+TGG 0.625190 7:-529185 None:intergenic
TTCAACATGCTGACCAGTGG+AGG 0.626398 7:-530233 None:intergenic
ATATTCAACATGCTGACCAG+TGG 0.633992 7:-530236 None:intergenic
ACATACCCTCTCAGGAAAAG+GGG 0.634258 7:-527609 None:intergenic
AGCACCTGATAACCTTGCCA+TGG 0.635229 7:-530466 None:intergenic
TTGGAGAAGATGCACTCAAG+GGG 0.638893 7:+529914 MsG0780035956.01.T01:CDS
AAAGGCCGGTTACCATGGCA+AGG 0.640441 7:+530454 MsG0780035956.01.T01:CDS
ACAAGGAGAATATTACGTGA+TGG 0.641400 7:+529029 MsG0780035956.01.T01:CDS
ACACTTGCCACTCGTAAGGA+GGG 0.643172 7:-528817 None:intergenic
TCCAAGCACACTATCAAACA+AGG 0.651722 7:-530729 None:intergenic
GTGGAGAGGAAACTTGGCAA+AGG 0.654106 7:+528584 MsG0780035956.01.T01:CDS
TAGGATGTCTGCCGAAATGG+TGG 0.657696 7:+529862 MsG0780035956.01.T01:intron
GTACATTATAAAGGAAGACA+AGG 0.658821 7:+529012 MsG0780035956.01.T01:CDS
GTTGGTCGTCGAGTAACCGG+TGG 0.658919 7:+528626 MsG0780035956.01.T01:CDS
GGTGTTGCTCAAGAGGATGA+GGG 0.659331 7:+527578 MsG0780035956.01.T01:CDS
AATGGTGGCATGCATTGCTG+TGG 0.668208 7:+529877 MsG0780035956.01.T01:CDS
GTATTCCATGACTTCCACCA+AGG 0.671722 7:-528984 None:intergenic
AGGTTCGCCTATGTTCAAAG+TGG 0.676871 7:+528565 MsG0780035956.01.T01:CDS
ACTATGGCCCTCCTTACGAG+TGG 0.689741 7:+528810 MsG0780035956.01.T01:CDS
AGCATACCTCAGTGGCACCG+GGG 0.709149 7:-528667 None:intergenic
TGGAGAAGATGCACTCAAGG+GGG 0.711646 7:+529915 MsG0780035956.01.T01:CDS
TCATTATAGATATGTGCATG+GGG 0.716228 7:+530029 MsG0780035956.01.T01:intron
CACATGCAGTAGATTTGTGG+CGG 0.728618 7:-527354 None:intergenic
CAACCCTCAGCATACCTCAG+TGG 0.734914 7:-528675 None:intergenic
GTGATGGGTGATGAAAGTGG+TGG 0.743174 7:+527539 MsG0780035956.01.T01:exon
AACTTGTGCCGCTATCACGG+CGG 0.760975 7:+527431 MsG0780035956.01.T01:five_prime_UTR
TTGGACCAAATCCTGCACTG+CGG 0.818000 7:+530747 MsG0780035956.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAGAATGAATTTATTATTTA+TGG + Chr7:527830-527849 MsG0780035956.01.T01:intron 10.0%
!! TCATTAAAAAAATAGTTAAT+TGG - Chr7:529101-529120 None:intergenic 10.0%
!!! CATGTTTTTTTTTTTTTTTT+TGG + Chr7:527679-527698 MsG0780035956.01.T01:intron 10.0%
!!! TTTTTTTTTTTTTTTTTGGT+TGG + Chr7:527683-527702 MsG0780035956.01.T01:intron 10.0%
!! AAATATAAAAAACAAATCTC+AGG - Chr7:528951-528970 None:intergenic 15.0%
!! AATATACAATCAATATGTAA+CGG - Chr7:529264-529283 None:intergenic 15.0%
!! ATTATCATTATATTATATGC+AGG + Chr7:529120-529139 MsG0780035956.01.T01:intron 15.0%
!! GAAAAAAATAAATAATTGGT+AGG - Chr7:527229-527248 None:intergenic 15.0%
!! TATAAAAATATGTAATCAGT+AGG + Chr7:528100-528119 MsG0780035956.01.T01:intron 15.0%
!! TATAGATTTATTGATATCTA+TGG + Chr7:527882-527901 MsG0780035956.01.T01:intron 15.0%
!! TTTCTTTGTTAAGATTATAT+TGG + Chr7:529290-529309 MsG0780035956.01.T01:intron 15.0%
!!! AGATTAGTTATATTTTGTAT+AGG + Chr7:529368-529387 MsG0780035956.01.T01:intron 15.0%
!!! ATAATTCATTGCATATTTTT+GGG - Chr7:528314-528333 None:intergenic 15.0%
!!! TATATTTTTAATTTTTGCAG+AGG + Chr7:530334-530353 MsG0780035956.01.T01:intron 15.0%
!!! TTTGTCTTTTGTTTTTTTAA+TGG + Chr7:529808-529827 MsG0780035956.01.T01:intron 15.0%
!! AAAAAATAGTTAATTGGCTA+AGG - Chr7:529095-529114 None:intergenic 20.0%
!! AAACTTAACCAAACATAATT+AGG - Chr7:528081-528100 None:intergenic 20.0%
!! AAATCAATATACCAAACAAA+AGG - Chr7:529974-529993 None:intergenic 20.0%
!! AACTGTAGTATATTGTAAAT+TGG + Chr7:528886-528905 MsG0780035956.01.T01:intron 20.0%
!! AATGGATAAATAAGATATAG+AGG - Chr7:529727-529746 None:intergenic 20.0%
!! ATACCTAAAGTACATTATAA+AGG + Chr7:529003-529022 MsG0780035956.01.T01:CDS 20.0%
!! ATAGAGAAGAAAAAATTGAA+AGG - Chr7:527259-527278 None:intergenic 20.0%
!! ATGATTTATGTAGAACATTA+TGG + Chr7:529414-529433 MsG0780035956.01.T01:intron 20.0%
!! ATTATATTATATGCAGGTTA+TGG + Chr7:529126-529145 MsG0780035956.01.T01:intron 20.0%
!! ATTCAAAGAATTTACTTGAA+TGG - Chr7:529621-529640 None:intergenic 20.0%
!! CCTTGTAAGATTAAAAAAAA+GGG - Chr7:530182-530201 None:intergenic 20.0%
!! CTTGTAAGATTAAAAAAAAG+GGG - Chr7:530181-530200 None:intergenic 20.0%
!! CTTTACTATGAAATTCTAAT+GGG - Chr7:528156-528175 None:intergenic 20.0%
!! TCCTTGTAAGATTAAAAAAA+AGG - Chr7:530183-530202 None:intergenic 20.0%
!! TCTTTACTATGAAATTCTAA+TGG - Chr7:528157-528176 None:intergenic 20.0%
!!! AAAAGGAGCATATTAATTAT+TGG - Chr7:529768-529787 None:intergenic 20.0%
!!! CATAATTCATTGCATATTTT+TGG - Chr7:528315-528334 None:intergenic 20.0%
!!! TAACTAATCTTGTTTTAGTT+TGG - Chr7:529358-529377 None:intergenic 20.0%
!!! TTAGTTATATTTTGTATAGG+CGG + Chr7:529371-529390 MsG0780035956.01.T01:intron 20.0%
! AAGCACATATATATTAACCA+TGG - Chr7:528484-528503 None:intergenic 25.0%
! AGAATTTCATAGTAAAGAGA+TGG + Chr7:528159-528178 MsG0780035956.01.T01:intron 25.0%
! ATACTGGATGAGAATAAAAA+AGG - Chr7:530496-530515 None:intergenic 25.0%
! CATTTAGTGTGTTAATTTCA+CGG - Chr7:527723-527742 None:intergenic 25.0%
! CTTCCTTTATAATGTACTTT+AGG - Chr7:529009-529028 None:intergenic 25.0%
! GAAAAATTGAACAAACTCAT+AGG - Chr7:527637-527656 None:intergenic 25.0%
! GATAAACACCTAATTATGTT+TGG + Chr7:528070-528089 MsG0780035956.01.T01:intron 25.0%
! GGATTAAAACAAACATGTAA+TGG - Chr7:530538-530557 None:intergenic 25.0%
! TAAAAATATCCAACATCTTG+AGG + Chr7:530309-530328 MsG0780035956.01.T01:intron 25.0%
! TAGGTGTTTATCAATCAAAT+TGG - Chr7:528062-528081 None:intergenic 25.0%
! TTCATTATAGATATGTGCAT+GGG + Chr7:530028-530047 MsG0780035956.01.T01:intron 25.0%
! TTTAGAAATCGGATAAATGT+TGG + Chr7:527910-527929 MsG0780035956.01.T01:intron 25.0%
! TTTGAACATAGAAACAGTAA+AGG + Chr7:528782-528801 MsG0780035956.01.T01:CDS 25.0%
!! AAATTGTTTCTTGTTGATCT+CGG + Chr7:530105-530124 MsG0780035956.01.T01:CDS 25.0%
!! AATAATTGGTAGGTTGAATT+TGG - Chr7:527219-527238 None:intergenic 25.0%
!! ATTTTTGAATGATGTAACCA+TGG + Chr7:528464-528483 MsG0780035956.01.T01:intron 25.0%
!! TGATTGTCTTTTGAATATGT+AGG + Chr7:529843-529862 MsG0780035956.01.T01:intron 25.0%
!! TTGCTATCTTTTCATATTTC+AGG + Chr7:528748-528767 MsG0780035956.01.T01:intron 25.0%
!!! ACTCTCATTTTTCTTCATAA+AGG + Chr7:530436-530455 MsG0780035956.01.T01:CDS 25.0%
!!! ATTGATTTAGTTGAGTTTTC+TGG + Chr7:529986-530005 MsG0780035956.01.T01:intron 25.0%
!!! CCCTTTTTTTTAATCTTACA+AGG + Chr7:530179-530198 MsG0780035956.01.T01:intron 25.0%
!!! TATGGTAACTTGATTTTGAT+CGG + Chr7:527848-527867 MsG0780035956.01.T01:intron 25.0%
!!! TGAGTTTGTTCAATTTTTCA+TGG + Chr7:527638-527657 MsG0780035956.01.T01:intron 25.0%
!!! TTTTATTTTCAGCAACAAAG+TGG + Chr7:530203-530222 MsG0780035956.01.T01:intron 25.0%
AAAAGAAACCTGAACATATC+AGG - Chr7:530271-530290 None:intergenic 30.0%
AAACCAGAAAGGGAAAAAAA+AGG - Chr7:529785-529804 None:intergenic 30.0%
AAAGAAACCTGAACATATCA+GGG - Chr7:530270-530289 None:intergenic 30.0%
AAATATAAGCCTCAAGATGT+TGG - Chr7:530321-530340 None:intergenic 30.0%
AAATTGAAATTTACCAGGTC+GGG + Chr7:530896-530915 MsG0780035956.01.T01:intron 30.0%
AAGAGGTAGAAGAAATTGAA+GGG + Chr7:527516-527535 MsG0780035956.01.T01:five_prime_UTR 30.0%
AATTTGGAGAATTAGGGTTA+GGG - Chr7:527203-527222 None:intergenic 30.0%
AGGTTGAATTTGGAGAATTA+GGG - Chr7:527209-527228 None:intergenic 30.0%
ATCAAACAAGGATATTAGCT+TGG - Chr7:530720-530739 None:intergenic 30.0%
CAAATTGAAATTTACCAGGT+CGG + Chr7:530895-530914 MsG0780035956.01.T01:intron 30.0%
CCTGTCAGAGAAATTAAAAA+CGG - Chr7:530559-530578 None:intergenic 30.0%
CTATGGAGAAGTTTAGAAAT+CGG + Chr7:527899-527918 MsG0780035956.01.T01:intron 30.0%
CTTGTTTGCAAAAAGAAGAT+GGG + Chr7:530596-530615 MsG0780035956.01.T01:CDS 30.0%
GAAGCAGATACAATCATAAA+AGG - Chr7:529212-529231 None:intergenic 30.0%
GACCTGGTAAATTTCAATTT+GGG - Chr7:530896-530915 None:intergenic 30.0%
GTACATTATAAAGGAAGACA+AGG + Chr7:529012-529031 MsG0780035956.01.T01:CDS 30.0%
GTCAAAACAAATTGAAGGAA+AGG - Chr7:528528-528547 None:intergenic 30.0%
GTCTTACTAATAAGCTCAAA+AGG + Chr7:528334-528353 MsG0780035956.01.T01:intron 30.0%
GTTAAGATTATATTGGAGTG+AGG + Chr7:529297-529316 MsG0780035956.01.T01:intron 30.0%
GTTCATTATAGATATGTGCA+TGG + Chr7:530027-530046 MsG0780035956.01.T01:intron 30.0%
TAAGATTAAAAAAAAGGGGC+CGG - Chr7:530177-530196 None:intergenic 30.0%
TATATCTAAGCCTTCTATTC+TGG + Chr7:529695-529714 MsG0780035956.01.T01:intron 30.0%
TCATTATAGATATGTGCATG+GGG + Chr7:530029-530048 MsG0780035956.01.T01:intron 30.0%
TGGAACTTTAATGTGGTTAA+AGG + Chr7:528703-528722 MsG0780035956.01.T01:intron 30.0%
TGTAACTTGGAACTTTAATG+TGG + Chr7:528696-528715 MsG0780035956.01.T01:intron 30.0%
TTCCCAAATTGAAATTTACC+AGG + Chr7:530891-530910 MsG0780035956.01.T01:intron 30.0%
TTTGGGTCAAAACAAATTGA+AGG - Chr7:528533-528552 None:intergenic 30.0%
! AAACCAGAGAACTTTTTACT+AGG + Chr7:530057-530076 MsG0780035956.01.T01:CDS 30.0%
! CTATCTTTTCATATTTCAGG+TGG + Chr7:528751-528770 MsG0780035956.01.T01:intron 30.0%
! GAAGATTTTTGTATATGCGA+TGG + Chr7:528369-528388 MsG0780035956.01.T01:intron 30.0%
! GATATTAGCTTGGAATAGTT+AGG - Chr7:530710-530729 None:intergenic 30.0%
! TAGGTTGAATTTGGAGAATT+AGG - Chr7:527210-527229 None:intergenic 30.0%
! TATCACGCTTTTAAACCTTT+GGG + Chr7:530837-530856 MsG0780035956.01.T01:intron 30.0%
! TATTTTGTATAGGCGGTTTT+TGG + Chr7:529378-529397 MsG0780035956.01.T01:intron 30.0%
! TCTTGTTTGCAAAAAGAAGA+TGG + Chr7:530595-530614 MsG0780035956.01.T01:CDS 30.0%
! TGTGGTTAAAGGATTTTCAT+TGG + Chr7:528714-528733 MsG0780035956.01.T01:intron 30.0%
! TTATCACGCTTTTAAACCTT+TGG + Chr7:530836-530855 MsG0780035956.01.T01:intron 30.0%
!! GATTTTGATCGGATAAATGT+TGG + Chr7:527859-527878 MsG0780035956.01.T01:intron 30.0%
!! GTTTTTGTTGTAGGTGTAAA+TGG + Chr7:529487-529506 MsG0780035956.01.T01:intron 30.0%
!! TCATTTTTCTTCATAAAGGC+CGG + Chr7:530440-530459 MsG0780035956.01.T01:CDS 30.0%
!!! CGTTTTTAATTTCTCTGACA+GGG + Chr7:530557-530576 MsG0780035956.01.T01:intron 30.0%
!!! CTTGTTTTAGTTTGGTTAGA+TGG - Chr7:529350-529369 None:intergenic 30.0%
!!! GTGAGAAATTTTGTTTTTGC+CGG + Chr7:530155-530174 MsG0780035956.01.T01:intron 30.0%
!!! TTCAATTTGTTTTGACCCAA+AGG + Chr7:528532-528551 MsG0780035956.01.T01:intron 30.0%
AACAGTAAAGGTTGCAACTA+TGG + Chr7:528794-528813 MsG0780035956.01.T01:CDS 35.0%
AACATGTAGTCAAGAGAGTT+TGG + Chr7:527794-527813 MsG0780035956.01.T01:intron 35.0%
AACTCAAGGAAATGTCTGAA+AGG - Chr7:530659-530678 None:intergenic 35.0%
AAGACAAACACAAACCAGAA+AGG - Chr7:529796-529815 None:intergenic 35.0%
ACAAGGAGAATATTACGTGA+TGG + Chr7:529029-529048 MsG0780035956.01.T01:CDS 35.0%
ACACTAAATGCAGAGAAGTA+GGG + Chr7:527733-527752 MsG0780035956.01.T01:intron 35.0%
AGACAAACACAAACCAGAAA+GGG - Chr7:529795-529814 None:intergenic 35.0%
AGAGGTAGAAGAAATTGAAG+GGG + Chr7:527517-527536 MsG0780035956.01.T01:five_prime_UTR 35.0%
ATTGATATCCATTGTGTAGC+AGG - Chr7:530994-531013 None:intergenic 35.0%
ATTTGGGAAACAGATGATCA+TGG - Chr7:530880-530899 None:intergenic 35.0%
CCTAAAAAGAAGGTTCGTTT+GGG + Chr7:530964-530983 MsG0780035956.01.T01:CDS 35.0%
CGACCTGGTAAATTTCAATT+TGG - Chr7:530897-530916 None:intergenic 35.0%
CTAAAAAGAAGGTTCGTTTG+GGG + Chr7:530965-530984 MsG0780035956.01.T01:CDS 35.0%
CTAAAACAACCCCAAAAAAC+CGG - Chr7:528228-528247 None:intergenic 35.0%
CTCACTGACAAAGAAGAAAA+TGG - Chr7:529745-529764 None:intergenic 35.0%
CTGAACAAGTGTTCATAAGT+GGG + Chr7:528183-528202 MsG0780035956.01.T01:intron 35.0%
GAAAAAAGAGCTGAAGAAAC+CGG + Chr7:527457-527476 MsG0780035956.01.T01:five_prime_UTR 35.0%
GAAGAGGTAGAAGAAATTGA+AGG + Chr7:527515-527534 MsG0780035956.01.T01:five_prime_UTR 35.0%
GAATTTGGAGAATTAGGGTT+AGG - Chr7:527204-527223 None:intergenic 35.0%
GAGAGGTAGATTGAATATTG+AGG + Chr7:530924-530943 MsG0780035956.01.T01:CDS 35.0%
GATATTTGAGCCTGATAACT+TGG + Chr7:527487-527506 MsG0780035956.01.T01:five_prime_UTR 35.0%
GGCTCAAATATCTCAATAAC+CGG - Chr7:527479-527498 None:intergenic 35.0%
TAAAAAGAAGGTTCGTTTGG+GGG + Chr7:530966-530985 MsG0780035956.01.T01:CDS 35.0%
TATGTACAAGTTTCGTGAAG+AGG + Chr7:528917-528936 MsG0780035956.01.T01:intron 35.0%
TCATACAAGCACTAATGCAT+CGG + Chr7:528128-528147 MsG0780035956.01.T01:intron 35.0%
TCATGTTCACTACAAACTCA+AGG - Chr7:530673-530692 None:intergenic 35.0%
TCTTCTCTTACCAAGTTATC+AGG - Chr7:527500-527519 None:intergenic 35.0%
TGAACAAGTGTTCATAAGTG+GGG + Chr7:528184-528203 MsG0780035956.01.T01:intron 35.0%
TGACCTAGTAAAAAGTTCTC+TGG - Chr7:530063-530082 None:intergenic 35.0%
TGAGCACCTTCAGTATTAAT+TGG - Chr7:530773-530792 None:intergenic 35.0%
TGATAACTTGGTAAGAGAAG+AGG + Chr7:527499-527518 MsG0780035956.01.T01:five_prime_UTR 35.0%
TGTAGGAACAATTGATATGC+TGG - Chr7:527775-527794 None:intergenic 35.0%
TTCTCATCCAGTATTTACTG+TGG + Chr7:530502-530521 MsG0780035956.01.T01:intron 35.0%
TTTCTTGTTGATCTCGGATT+AGG + Chr7:530111-530130 MsG0780035956.01.T01:CDS 35.0%
! CTTGTATTCAGCCTTTTGTT+TGG + Chr7:529960-529979 MsG0780035956.01.T01:intron 35.0%
! TTGGATTTTTCACAGCTTAC+CGG - Chr7:527412-527431 None:intergenic 35.0%
!! TAATAAAGGTGTTGCTCAAG+AGG + Chr7:527571-527590 MsG0780035956.01.T01:CDS 35.0%
!! TAATACTGAAGGTGCTCAAA+AGG + Chr7:530775-530794 MsG0780035956.01.T01:CDS 35.0%
!!! ATTTTGTTTTGAAGCACCCT+TGG + Chr7:528967-528986 MsG0780035956.01.T01:intron 35.0%
!!! CCGTTTTTAATTTCTCTGAC+AGG + Chr7:530556-530575 MsG0780035956.01.T01:intron 35.0%
!!! GGTTTTTTGGGGTTGTTTTA+GGG + Chr7:528227-528246 MsG0780035956.01.T01:intron 35.0%
!!! GTTTTTTGGGGTTGTTTTAG+GGG + Chr7:528228-528247 MsG0780035956.01.T01:intron 35.0%
!!! TTTTGGGTTCCAAAAGTGTT+GGG - Chr7:528298-528317 None:intergenic 35.0%
!!! TTTTTGGGTTCCAAAAGTGT+TGG - Chr7:528299-528318 None:intergenic 35.0%
AACCTCCTACTTGAACCTTT+GGG - Chr7:528550-528569 None:intergenic 40.0%
ACTAAGTAGAATCCGCTACT+TGG - Chr7:529451-529470 None:intergenic 40.0%
AGAAGAAATTGAAGGGGTGA+TGG + Chr7:527523-527542 MsG0780035956.01.T01:exon 40.0%
AGGAAATGTCTGAAAGGAGT+AGG - Chr7:530653-530672 None:intergenic 40.0%
AGGTGCTCAAAAGGTAATGA+TGG + Chr7:530784-530803 MsG0780035956.01.T01:intron 40.0%
ATATTCAACATGCTGACCAG+TGG - Chr7:530239-530258 None:intergenic 40.0%
ATTAAGACGGTCATTACCAC+CGG - Chr7:528645-528664 None:intergenic 40.0%
CAAGAATGCCAATGAAGCAA+AGG + Chr7:531022-531041 MsG0780035956.01.T01:CDS 40.0%
CACACTAAATGCAGAGAAGT+AGG + Chr7:527732-527751 MsG0780035956.01.T01:intron 40.0%
CCACTTATGAACACTTGTTC+AGG - Chr7:528185-528204 None:intergenic 40.0%
CCTGAACAAGTGTTCATAAG+TGG + Chr7:528182-528201 MsG0780035956.01.T01:intron 40.0%
CTCTCTTGACTACATGTTGT+AGG - Chr7:527792-527811 None:intergenic 40.0%
GAACAAGTGTTCATAAGTGG+GGG + Chr7:528185-528204 MsG0780035956.01.T01:intron 40.0%
GAACACATGCAGTAGATTTG+TGG - Chr7:527360-527379 None:intergenic 40.0%
GAAGAAATTGAAGGGGTGAT+GGG + Chr7:527524-527543 MsG0780035956.01.T01:exon 40.0%
GCAAGTGTTCATGCTCATTT+GGG + Chr7:530370-530389 MsG0780035956.01.T01:CDS 40.0%
GCAGAGAAGTAGGGATAAAT+GGG + Chr7:527742-527761 MsG0780035956.01.T01:intron 40.0%
GCCTAAAAAGAAGGTTCGTT+TGG + Chr7:530963-530982 MsG0780035956.01.T01:CDS 40.0%
GGAAATGTCTGAAAGGAGTA+GGG - Chr7:530652-530671 None:intergenic 40.0%
GGATTCTACTTAGTGGGATA+AGG + Chr7:529457-529476 MsG0780035956.01.T01:intron 40.0%
GGTGGTTTGAGTGCTAATAA+AGG + Chr7:527557-527576 MsG0780035956.01.T01:CDS 40.0%
TATTCCATGACTTCCACCAA+GGG - Chr7:528986-529005 None:intergenic 40.0%
TCCAAGCACACTATCAAACA+AGG - Chr7:530732-530751 None:intergenic 40.0%
TGATTCGCAGCCTAAAAAGA+AGG + Chr7:530954-530973 MsG0780035956.01.T01:CDS 40.0%
TGCAAGTGTTCATGCTCATT+TGG + Chr7:530369-530388 MsG0780035956.01.T01:CDS 40.0%
TGCAGAGAAGTAGGGATAAA+TGG + Chr7:527741-527760 MsG0780035956.01.T01:intron 40.0%
TTCAAAGTGGAGAGGAAACT+TGG + Chr7:528578-528597 MsG0780035956.01.T01:CDS 40.0%
TTCCTCTCCACTTTGAACAT+AGG - Chr7:528575-528594 None:intergenic 40.0%
TTTGACCCAAAGGTTCAAGT+AGG + Chr7:528542-528561 MsG0780035956.01.T01:intron 40.0%
! AAACTTGGCAAAGGTGGATT+TGG + Chr7:528593-528612 MsG0780035956.01.T01:CDS 40.0%
! AACTTTTTACTAGGTCAGCC+AGG + Chr7:530066-530085 MsG0780035956.01.T01:CDS 40.0%
! CCCAAACGAACCTTCTTTTT+AGG - Chr7:530967-530986 None:intergenic 40.0%
! GGATGCGACGAATTTTGAAT+TGG - Chr7:527171-527190 None:intergenic 40.0%
! GGATTTGGACAGGTTTTTGT+TGG + Chr7:528608-528627 MsG0780035956.01.T01:CDS 40.0%
!! AAGTAGCGGATTCTACTTAG+TGG + Chr7:529450-529469 MsG0780035956.01.T01:intron 40.0%
!! AGTAGCGGATTCTACTTAGT+GGG + Chr7:529451-529470 MsG0780035956.01.T01:intron 40.0%
!! TCCTTGTTTGATAGTGTGCT+TGG + Chr7:530728-530747 MsG0780035956.01.T01:CDS 40.0%
!!! CGGTTTTTTGGGGTTGTTTT+AGG + Chr7:528226-528245 MsG0780035956.01.T01:intron 40.0%
!!! GCTCCTTTTTTTTCCCTTTC+TGG + Chr7:529779-529798 MsG0780035956.01.T01:intron 40.0%
!!! GGCTTGGTTGTTTTTGTTGT+AGG + Chr7:529478-529497 MsG0780035956.01.T01:intron 40.0%
!!! TGTATAGGCGGTTTTTGGTT+TGG + Chr7:529383-529402 MsG0780035956.01.T01:intron 40.0%
AAAAAACCGGTTGTGAGGTG+AGG - Chr7:528215-528234 None:intergenic 45.0%
AAAAGGCTTATACTCACGCC+TGG - Chr7:529195-529214 None:intergenic 45.0%
AATACAATGACGCCACCCAA+AGG - Chr7:530855-530874 None:intergenic 45.0%
AATCAACGCACACGATGATC+AGG + Chr7:527318-527337 MsG0780035956.01.T01:five_prime_UTR 45.0%
ACACATACCCTCTCAGGAAA+AGG - Chr7:527614-527633 None:intergenic 45.0%
ACATACCCTCTCAGGAAAAG+GGG - Chr7:527612-527631 None:intergenic 45.0%
AGCAATGCATGCCACCATTT+CGG - Chr7:529876-529895 None:intergenic 45.0%
AGGTTCGCCTATGTTCAAAG+TGG + Chr7:528565-528584 MsG0780035956.01.T01:CDS 45.0%
ATGCAGGTTATGGACATGCT+TGG + Chr7:529136-529155 MsG0780035956.01.T01:intron 45.0%
ATGTAGGATGTCTGCCGAAA+TGG + Chr7:529859-529878 MsG0780035956.01.T01:intron 45.0%
CACATACCCTCTCAGGAAAA+GGG - Chr7:527613-527632 None:intergenic 45.0%
CACATGCAGTAGATTTGTGG+CGG - Chr7:527357-527376 None:intergenic 45.0%
CCAATCGCCACAGTAAATAC+TGG - Chr7:530512-530531 None:intergenic 45.0%
CCAGTATTTACTGTGGCGAT+TGG + Chr7:530509-530528 MsG0780035956.01.T01:intron 45.0%
CTACTTAGTGGGATAAGGCT+TGG + Chr7:529462-529481 MsG0780035956.01.T01:intron 45.0%
CTGCGGCCAATTAATACTGA+AGG + Chr7:530764-530783 MsG0780035956.01.T01:CDS 45.0%
CTTGGAGAAGATGCACTCAA+GGG + Chr7:529913-529932 MsG0780035956.01.T01:CDS 45.0%
GAACCTCCTACTTGAACCTT+TGG - Chr7:528551-528570 None:intergenic 45.0%
GATAACCTTGCCATGGTAAC+CGG - Chr7:530462-530481 None:intergenic 45.0%
GGCGAAACTAGAACTAGGAT+GGG + Chr7:528249-528268 MsG0780035956.01.T01:intron 45.0%
GTATGCTGAGGGTTGTAACT+TGG + Chr7:528683-528702 MsG0780035956.01.T01:intron 45.0%
GTATTCCATGACTTCCACCA+AGG - Chr7:528987-529006 None:intergenic 45.0%
GTGTTCATGCTCATTTGGGA+AGG + Chr7:530374-530393 MsG0780035956.01.T01:CDS 45.0%
GTTACCATGGCAAGGTTATC+AGG + Chr7:530462-530481 MsG0780035956.01.T01:CDS 45.0%
TCTTGGAGAAGATGCACTCA+AGG + Chr7:529912-529931 MsG0780035956.01.T01:CDS 45.0%
TGTGGAGTCATTGTCGATCT+TGG + Chr7:529895-529914 MsG0780035956.01.T01:CDS 45.0%
TTAGGGGCGAAACTAGAACT+AGG + Chr7:528244-528263 MsG0780035956.01.T01:intron 45.0%
TTAGGGTTAGGGTTTGATGC+AGG - Chr7:527192-527211 None:intergenic 45.0%
TTCATAAAGGCCGGTTACCA+TGG + Chr7:530449-530468 MsG0780035956.01.T01:CDS 45.0%
TTCCAAACATCCCACAAGCT+TGG - Chr7:529163-529182 None:intergenic 45.0%
TTCTTCTCTTGTGCTGTACC+TGG - Chr7:530087-530106 None:intergenic 45.0%
TTGGAGAAGATGCACTCAAG+GGG + Chr7:529914-529933 MsG0780035956.01.T01:CDS 45.0%
TTGTACACTTGCCACTCGTA+AGG - Chr7:528824-528843 None:intergenic 45.0%
TTTGTTGGTCGTCGAGTAAC+CGG + Chr7:528623-528642 MsG0780035956.01.T01:CDS 45.0%
! ATACTACCCCTTTTCCTGAG+AGG + Chr7:527603-527622 MsG0780035956.01.T01:CDS 45.0%
! CACGCTTTTAAACCTTTGGG+TGG + Chr7:530840-530859 MsG0780035956.01.T01:intron 45.0%
! GGTGGTAATGACCGTCTTAA+TGG + Chr7:528644-528663 MsG0780035956.01.T01:CDS 45.0%
! TACTACCCCTTTTCCTGAGA+GGG + Chr7:527604-527623 MsG0780035956.01.T01:CDS 45.0%
! TGGGATGTTTGGAATACCAC+AGG + Chr7:529169-529188 MsG0780035956.01.T01:CDS 45.0%
!! GTTCCAAAAGTGTTGGGATG+AGG - Chr7:528292-528311 None:intergenic 45.0%
!!! ACCTCACAACCGGTTTTTTG+GGG + Chr7:528216-528235 MsG0780035956.01.T01:intron 45.0%
!!! CACCTCACAACCGGTTTTTT+GGG + Chr7:528215-528234 MsG0780035956.01.T01:intron 45.0%
!!! TCACCTCACAACCGGTTTTT+TGG + Chr7:528214-528233 MsG0780035956.01.T01:intron 45.0%
!!! TTGTTTTGAAGCACCCTTGG+TGG + Chr7:528970-528989 MsG0780035956.01.T01:intron 45.0%
!! AATTGAAAAAAATAAATAAT+TGG - Chr7:527233-527252 None:intergenic 5.0%
!!! TAAATAAATTTTTTAAAACA+TGG - Chr7:528016-528035 None:intergenic 5.0%
AATGACCGTCTTAATGGCCC+CGG + Chr7:528650-528669 MsG0780035956.01.T01:CDS 50.0%
AATGGTGGCATGCATTGCTG+TGG + Chr7:529877-529896 MsG0780035956.01.T01:CDS 50.0%
ACACTTGCCACTCGTAAGGA+GGG - Chr7:528820-528839 None:intergenic 50.0%
ACATGCTTGGTCCAAGCTTG+TGG + Chr7:529149-529168 MsG0780035956.01.T01:CDS 50.0%
ACCCCAAAAAACCGGTTGTG+AGG - Chr7:528220-528239 None:intergenic 50.0%
AGCACCTGATAACCTTGCCA+TGG - Chr7:530469-530488 None:intergenic 50.0%
CAGAAGCAGCATAGCATCTC+AGG - Chr7:530629-530648 None:intergenic 50.0%
CATAGGACACATACCCTCTC+AGG - Chr7:527620-527639 None:intergenic 50.0%
CATGCTTGGTCCAAGCTTGT+GGG + Chr7:529150-529169 MsG0780035956.01.T01:CDS 50.0%
CGAGTGGCAAGTGTACAAGT+AGG + Chr7:528826-528845 MsG0780035956.01.T01:intron 50.0%
CGCCTATGTTCAAAGTGGAG+AGG + Chr7:528570-528589 MsG0780035956.01.T01:CDS 50.0%
GACCCAAAGGTTCAAGTAGG+AGG + Chr7:528545-528564 MsG0780035956.01.T01:intron 50.0%
GAGAGGAAACTTGGCAAAGG+TGG + Chr7:528587-528606 MsG0780035956.01.T01:CDS 50.0%
GAGGACACAGCCAGAATAGA+AGG - Chr7:529708-529727 None:intergenic 50.0%
GCGCTGTTTGATCCAAGTAG+CGG + Chr7:529436-529455 MsG0780035956.01.T01:intron 50.0%
GGGCGAAACTAGAACTAGGA+TGG + Chr7:528248-528267 MsG0780035956.01.T01:intron 50.0%
GTATTAATTGGCCGCAGTGC+AGG - Chr7:530761-530780 None:intergenic 50.0%
GTCCAAGCTTGTGGGATGTT+TGG + Chr7:529158-529177 MsG0780035956.01.T01:CDS 50.0%
GTGGAGAGGAAACTTGGCAA+AGG + Chr7:528584-528603 MsG0780035956.01.T01:CDS 50.0%
TACACTTGCCACTCGTAAGG+AGG - Chr7:528821-528840 None:intergenic 50.0%
TAGGATGTCTGCCGAAATGG+TGG + Chr7:529862-529881 MsG0780035956.01.T01:intron 50.0%
TGGAGAAGATGCACTCAAGG+GGG + Chr7:529915-529934 MsG0780035956.01.T01:CDS 50.0%
TTCAACATGCTGACCAGTGG+AGG - Chr7:530236-530255 None:intergenic 50.0%
TTGGACCAAATCCTGCACTG+CGG + Chr7:530747-530766 MsG0780035956.01.T01:CDS 50.0%
! CCAAACTTGTGCCGCTATCA+CGG + Chr7:527428-527447 MsG0780035956.01.T01:five_prime_UTR 50.0%
! GCACCTCATCCCAACACTTT+TGG + Chr7:528286-528305 MsG0780035956.01.T01:intron 50.0%
! TGGCAAAGGTGGATTTGGAC+AGG + Chr7:528598-528617 MsG0780035956.01.T01:CDS 50.0%
! TGTTTGGAATACCACAGGCC+AGG + Chr7:529174-529193 MsG0780035956.01.T01:CDS 50.0%
! TTTTCACAGCTTACCGGAGC+AGG - Chr7:527406-527425 None:intergenic 50.0%
! TTTTCTTGCCGCCGTGATAG+CGG - Chr7:527442-527461 None:intergenic 50.0%
!! AGGTGTTGCTCAAGAGGATG+AGG + Chr7:527577-527596 MsG0780035956.01.T01:CDS 50.0%
!! GGTGTTGCTCAAGAGGATGA+GGG + Chr7:527578-527597 MsG0780035956.01.T01:CDS 50.0%
!! GTGATGGGTGATGAAAGTGG+TGG + Chr7:527539-527558 MsG0780035956.01.T01:exon 50.0%
AAAGGCCGGTTACCATGGCA+AGG + Chr7:530454-530473 MsG0780035956.01.T01:CDS 55.0%
AACTAGGATGGGCGACCTCT+TGG + Chr7:528260-528279 MsG0780035956.01.T01:intron 55.0%
AAGTGGAGAGACACCTCCAC+TGG + Chr7:530220-530239 MsG0780035956.01.T01:CDS 55.0%
ACCAGCGCCCTGATATGTTC+AGG + Chr7:530260-530279 MsG0780035956.01.T01:CDS 55.0%
ACCTGAACATATCAGGGCGC+TGG - Chr7:530264-530283 None:intergenic 55.0%
ACTAGGATGGGCGACCTCTT+GGG + Chr7:528261-528280 MsG0780035956.01.T01:intron 55.0%
ACTATGGCCCTCCTTACGAG+TGG + Chr7:528810-528829 MsG0780035956.01.T01:CDS 55.0%
AGCACCCTTGGTGGAAGTCA+TGG + Chr7:528979-528998 MsG0780035956.01.T01:intron 55.0%
AGTACTTCGTCGTCCTGCTC+CGG + Chr7:527390-527409 MsG0780035956.01.T01:five_prime_UTR 55.0%
ATTGGCCGCAGTGCAGGATT+TGG - Chr7:530755-530774 None:intergenic 55.0%
CAACCCTCAGCATACCTCAG+TGG - Chr7:528678-528697 None:intergenic 55.0%
GGCAATCCTCACCTCACAAC+CGG + Chr7:528206-528225 MsG0780035956.01.T01:intron 55.0%
TACCAGGTCGGGCAAAAGAG+AGG + Chr7:530907-530926 MsG0780035956.01.T01:intron 55.0%
TCAGCATACCTCAGTGGCAC+CGG - Chr7:528672-528691 None:intergenic 55.0%
TGGGGGTTCCTGCTACACAA+TGG + Chr7:530983-531002 MsG0780035956.01.T01:CDS 55.0%
TTATACTCACGCCTGGCCTG+TGG - Chr7:529188-529207 None:intergenic 55.0%
! AACTTGTGCCGCTATCACGG+CGG + Chr7:527431-527450 MsG0780035956.01.T01:five_prime_UTR 55.0%
! GTGCCACTGAGGTATGCTGA+GGG + Chr7:528672-528691 MsG0780035956.01.T01:intron 55.0%
! TACCTCTCTTTTGCCCGACC+TGG - Chr7:530912-530931 None:intergenic 55.0%
!! CCGTGATAGCGGCACAAGTT+TGG - Chr7:527431-527450 None:intergenic 55.0%
!! GGGGTGATGGGTGATGAAAG+TGG + Chr7:527536-527555 MsG0780035956.01.T01:exon 55.0%
AGCATACCTCAGTGGCACCG+GGG - Chr7:528670-528689 None:intergenic 60.0%
CAGCATACCTCAGTGGCACC+GGG - Chr7:528671-528690 None:intergenic 60.0%
GGAGCAGGACGACGAAGTAC+TGG - Chr7:527391-527410 None:intergenic 60.0%
GGGATGAGGTGCAACCCAAG+AGG - Chr7:528278-528297 None:intergenic 60.0%
GTTGGTCGTCGAGTAACCGG+TGG + Chr7:528626-528645 MsG0780035956.01.T01:CDS 60.0%
! TGGCACCGGGGCCATTAAGA+CGG - Chr7:528658-528677 None:intergenic 60.0%
!! GGTGCCACTGAGGTATGCTG+AGG + Chr7:528671-528690 MsG0780035956.01.T01:intron 60.0%
!! TAATGGCCCCGGTGCCACTG+AGG + Chr7:528661-528680 MsG0780035956.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 527166 531047 527166 ID=MsG0780035956.01;Name=MsG0780035956.01
Chr7 mRNA 527166 531047 527166 ID=MsG0780035956.01.T01;Parent=MsG0780035956.01;Name=MsG0780035956.01.T01;_AED=0.42;_eAED=0.42;_QI=376|1|0.90|1|1|1|11|0|376
Chr7 exon 527166 527625 527166 ID=MsG0780035956.01.T01:exon:38250;Parent=MsG0780035956.01.T01
Chr7 exon 528554 528682 528554 ID=MsG0780035956.01.T01:exon:38251;Parent=MsG0780035956.01.T01
Chr7 exon 528770 528843 528770 ID=MsG0780035956.01.T01:exon:38252;Parent=MsG0780035956.01.T01
Chr7 exon 528981 529050 528981 ID=MsG0780035956.01.T01:exon:38253;Parent=MsG0780035956.01.T01
Chr7 exon 529142 529197 529142 ID=MsG0780035956.01.T01:exon:38254;Parent=MsG0780035956.01.T01
Chr7 exon 529865 529936 529865 ID=MsG0780035956.01.T01:exon:38255;Parent=MsG0780035956.01.T01
Chr7 exon 530038 530132 530038 ID=MsG0780035956.01.T01:exon:38256;Parent=MsG0780035956.01.T01
Chr7 exon 530215 530281 530215 ID=MsG0780035956.01.T01:exon:38257;Parent=MsG0780035956.01.T01
Chr7 exon 530354 530483 530354 ID=MsG0780035956.01.T01:exon:38258;Parent=MsG0780035956.01.T01
Chr7 exon 530578 530796 530578 ID=MsG0780035956.01.T01:exon:38259;Parent=MsG0780035956.01.T01
Chr7 exon 530913 531047 530913 ID=MsG0780035956.01.T01:exon:38260;Parent=MsG0780035956.01.T01
Chr7 five_prime_UTR 527166 527541 527166 ID=MsG0780035956.01.T01:five_prime_utr;Parent=MsG0780035956.01.T01
Chr7 CDS 527542 527625 527542 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 528554 528682 528554 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 528770 528843 528770 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 528981 529050 528981 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 529142 529197 529142 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 529865 529936 529865 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 530038 530132 530038 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 530215 530281 530215 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 530354 530483 530354 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 530578 530796 530578 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Chr7 CDS 530913 531047 530913 ID=MsG0780035956.01.T01:cds;Parent=MsG0780035956.01.T01
Gene Sequence

>MsG0780035956.01.T01

ATGGGTGATGAAAGTGGTGGTTTGAGTGCTAATAAAGGTGTTGCTCAAGAGGATGAGGGCAATACTACCCCTTTTCCTGAGAGGGTTCAAGTAGGAGGTTCGCCTATGTTCAAAGTGGAGAGGAAACTTGGCAAAGGTGGATTTGGACAGGTTTTTGTTGGTCGTCGAGTAACCGGTGGTAATGACCGTCTTAATGGCCCCGGTGCCACTGAGGTGGCTTTGAAATTTGAACATAGAAACAGTAAAGGTTGCAACTATGGCCCTCCTTACGAGTGGCAAGTGTACAACACCCTTGGTGGAAGTCATGGAATACCTAAAGTACATTATAAAGGAAGACAAGGAGAATATTACGTGATGGTTATGGACATGCTTGGTCCAAGCTTGTGGGATGTTTGGAATACCACAGGCCAGGCGATGTCTGCCGAAATGGTGGCATGCATTGCTGTGGAGTCATTGTCGATCTTGGAGAAGATGCACTCAAGGGGATATGTGCATGGGGATGTAAAACCAGAGAACTTTTTACTAGGTCAGCCAGGTACAGCACAAGAGAAGAAATTGTTTCTTGTTGATCTCGGATTAGCAACAAAGTGGAGAGACACCTCCACTGGTCAGCATGTTGAATATGACCAGCGCCCTGATATGTTCAGAGGAACTGTTCGATATGCAAGTGTTCATGCTCATTTGGGAAGGACTGCTAGCAGAAGAGATGATCTTGAATCTCTTGCATATACTCTCATTTTTCTTCATAAAGGCCGGTTACCATGGCAAGGTTATCAGGGAGATAATAAGTCGTATCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGATGCTATGCTGCTTCTGCCCTACTCCTTTCAGACATTTCCTTGAGTTTGTAGTGAACATGAAATTCGATGAAGAGCCTAACTATTCCAAGCTAATATCCTTGTTTGATAGTGTGCTTGGACCAAATCCTGCACTGCGGCCAATTAATACTGAAGGTGCTCAAAAGGTCGGGCAAAAGAGAGGTAGATTGAATATTGAGGAAGAAGATGATTCGCAGCCTAAAAAGAAGGTTCGTTTGGGGGTTCCTGCTACACAATGGATATCAATTTACAATGCAAGAATGCCAATGAAGCAAAGGTAG
Protein sequence

>MsG0780035956.01.T01

MGDESGGLSANKGVAQEDEGNTTPFPERVQVGGSPMFKVERKLGKGGFGQVFVGRRVTGGNDRLNGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNTTGQAMSAEMVACIAVESLSILEKMHSRGYVHGDVKPENFLLGQPGTAQEKKLFLVDLGLATKWRDTSTGQHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSYLVCKKKMGTSPEMLCCFCPTPFRHFLEFVVNMKFDEEPNYSKLISLFDSVLGPNPALRPINTEGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISIYNARMPMKQR*