AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780036970.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036970.01.T02 MTR_7g024670 88.131 337 22 4 1 322 40 373 0.0 528
MsG0780036970.01.T02 MTR_4g022370 39.871 311 160 11 9 309 55 348 4.73e-51 173
MsG0780036970.01.T02 MTR_4g063780 43.277 238 100 10 16 240 55 270 7.33e-42 148
MsG0780036970.01.T02 MTR_2g096740 42.601 223 76 8 16 223 26 211 2.53e-41 145
MsG0780036970.01.T02 MTR_2g096740 42.601 223 76 8 16 223 41 226 2.89e-41 145
MsG0780036970.01.T02 MTR_7g059400 44.860 214 95 6 13 225 53 244 1.45e-40 145
MsG0780036970.01.T02 MTR_8g479350 77.778 63 14 0 39 101 69 131 9.26e-32 121
MsG0780036970.01.T02 MTR_8g068210 57.143 91 29 1 12 102 16 96 9.90e-31 119
MsG0780036970.01.T02 MTR_3g090430 52.381 105 49 1 37 140 50 154 3.94e-30 117
MsG0780036970.01.T02 MTR_3g091820 57.609 92 34 1 1 92 11 97 3.67e-29 114
MsG0780036970.01.T02 MTR_8g015840 66.667 75 24 1 20 93 1 75 4.05e-29 111
MsG0780036970.01.T02 MTR_2g014060 73.134 67 17 1 23 89 11 76 5.66e-29 114
MsG0780036970.01.T02 MTR_8g079060 73.770 61 16 0 40 100 31 91 7.15e-29 111
MsG0780036970.01.T02 MTR_5g031440 88.000 50 6 0 39 88 44 93 1.07e-28 113
MsG0780036970.01.T02 MTR_4g109980 86.538 52 7 0 37 88 39 90 1.34e-28 112
MsG0780036970.01.T02 MTR_3g077750 67.123 73 19 2 16 88 44 111 2.76e-28 112
MsG0780036970.01.T02 MTR_4g461080 83.333 54 9 0 37 90 28 81 3.82e-28 110
MsG0780036970.01.T02 MTR_1g077600 42.742 124 70 1 12 135 17 139 5.48e-28 110
MsG0780036970.01.T02 MTR_1g077600 52.525 99 46 1 37 135 42 139 6.68e-28 110
MsG0780036970.01.T02 MTR_8g027295 72.464 69 14 1 40 103 26 94 1.42e-27 108
MsG0780036970.01.T02 MTR_2g059540 53.000 100 39 1 37 128 30 129 3.66e-27 106
MsG0780036970.01.T02 MTR_2g093220 78.571 56 12 0 37 92 39 94 4.50e-27 108
MsG0780036970.01.T02 MTR_2g014170 86.000 50 7 0 37 86 44 93 1.32e-26 107
MsG0780036970.01.T02 MTR_1g056810 79.245 53 11 0 40 92 14 66 3.70e-26 105
MsG0780036970.01.T02 MTR_2g013370 69.697 66 18 1 30 95 38 101 4.58e-26 105
MsG0780036970.01.T02 MTR_4g089095 73.770 61 14 1 35 95 47 105 1.37e-25 104
MsG0780036970.01.T02 MTR_4g089095 73.770 61 14 1 35 95 13 71 1.84e-25 103
MsG0780036970.01.T02 MTR_6g012450 76.471 51 12 0 40 90 138 188 1.21e-23 101
MsG0780036970.01.T02 MTR_2g016030 76.000 50 12 0 40 89 49 98 1.43e-23 95.1
MsG0780036970.01.T02 MTR_7g010950 56.790 81 30 2 40 116 137 216 4.24e-23 99.8
MsG0780036970.01.T02 MTR_8g044220 69.811 53 16 0 40 92 120 172 1.07e-22 98.2
MsG0780036970.01.T02 MTR_3g435480 67.213 61 16 1 40 100 138 194 1.68e-22 97.8
MsG0780036970.01.T02 MTR_4g082060 72.549 51 14 0 40 90 124 174 2.87e-22 97.1
MsG0780036970.01.T02 MTR_6g027450 57.534 73 27 1 18 90 73 141 4.73e-22 95.1
MsG0780036970.01.T02 MTR_5g041420 70.588 51 15 0 40 90 140 190 6.80e-22 94.4
MsG0780036970.01.T02 MTR_7g086780 67.241 58 18 1 39 96 100 156 6.95e-22 95.9
MsG0780036970.01.T02 MTR_5g041530 68.966 58 17 1 40 97 142 198 1.26e-21 94.7
MsG0780036970.01.T02 MTR_6g027460 67.308 52 17 0 39 90 97 148 2.95e-21 93.2
MsG0780036970.01.T02 MTR_5g041380 62.295 61 23 0 40 100 129 189 2.23e-20 90.9
MsG0780036970.01.T02 MTR_5g041400 62.295 61 23 0 40 100 121 181 2.49e-20 90.5
MsG0780036970.01.T03 MTR_7g024670 88.131 337 19 4 1 319 40 373 0.0 531
MsG0780036970.01.T03 MTR_4g022370 38.907 311 160 11 9 306 55 348 2.18e-50 171
MsG0780036970.01.T03 MTR_2g096740 43.498 223 71 9 16 220 26 211 2.47e-42 148
MsG0780036970.01.T03 MTR_2g096740 43.498 223 71 9 16 220 41 226 2.96e-42 148
MsG0780036970.01.T03 MTR_4g063780 43.460 237 98 11 16 237 55 270 4.04e-42 149
MsG0780036970.01.T03 MTR_7g059400 44.550 211 97 5 13 222 53 244 4.63e-41 146
MsG0780036970.01.T03 MTR_8g479350 77.778 63 14 0 39 101 69 131 9.69e-32 121
MsG0780036970.01.T03 MTR_8g068210 57.143 91 29 1 12 102 16 96 9.85e-31 119
MsG0780036970.01.T03 MTR_3g091820 57.609 92 34 1 1 92 11 97 3.11e-29 114
MsG0780036970.01.T03 MTR_8g015840 66.667 75 24 1 20 93 1 75 4.41e-29 111
MsG0780036970.01.T03 MTR_3g090430 50.476 105 48 1 37 137 50 154 5.84e-29 114
MsG0780036970.01.T03 MTR_2g014060 73.134 67 17 1 23 89 11 76 6.07e-29 114
MsG0780036970.01.T03 MTR_1g077600 44.068 118 54 2 22 132 27 139 7.93e-29 112
MsG0780036970.01.T03 MTR_8g079060 73.770 61 16 0 40 100 31 91 8.46e-29 110
MsG0780036970.01.T03 MTR_1g077600 44.068 118 54 2 22 132 27 139 1.13e-28 112
MsG0780036970.01.T03 MTR_5g031440 88.000 50 6 0 39 88 44 93 1.14e-28 113
MsG0780036970.01.T03 MTR_4g109980 86.538 52 7 0 37 88 39 90 1.44e-28 112
MsG0780036970.01.T03 MTR_3g077750 57.955 88 32 2 1 88 29 111 2.41e-28 112
MsG0780036970.01.T03 MTR_4g461080 83.333 54 9 0 37 90 28 81 3.34e-28 110
MsG0780036970.01.T03 MTR_8g027295 72.464 69 14 1 40 103 26 94 1.18e-27 108
MsG0780036970.01.T03 MTR_2g093220 78.571 56 12 0 37 92 39 94 4.74e-27 107
MsG0780036970.01.T03 MTR_2g059540 88.000 50 6 0 37 86 30 79 7.31e-27 105
MsG0780036970.01.T03 MTR_2g014170 86.000 50 7 0 37 86 44 93 1.33e-26 107
MsG0780036970.01.T03 MTR_1g056810 79.245 53 11 0 40 92 14 66 3.49e-26 105
MsG0780036970.01.T03 MTR_2g013370 69.697 66 18 1 30 95 38 101 5.31e-26 104
MsG0780036970.01.T03 MTR_4g089095 78.571 56 10 1 40 95 52 105 1.53e-25 103
MsG0780036970.01.T03 MTR_4g089095 73.770 61 14 1 35 95 13 71 2.09e-25 102
MsG0780036970.01.T03 MTR_6g012450 76.471 51 12 0 40 90 138 188 1.20e-23 101
MsG0780036970.01.T03 MTR_2g016030 76.000 50 12 0 40 89 49 98 1.66e-23 95.1
MsG0780036970.01.T03 MTR_7g010950 74.510 51 13 0 40 90 137 187 7.33e-23 99.0
MsG0780036970.01.T03 MTR_8g044220 69.811 53 16 0 40 92 120 172 1.12e-22 98.2
MsG0780036970.01.T03 MTR_3g435480 67.213 61 16 1 40 100 138 194 1.68e-22 97.8
MsG0780036970.01.T03 MTR_4g082060 72.549 51 14 0 40 90 124 174 3.12e-22 97.1
MsG0780036970.01.T03 MTR_6g027450 57.534 73 27 1 18 90 73 141 5.01e-22 94.7
MsG0780036970.01.T03 MTR_5g041420 70.588 51 15 0 40 90 140 190 7.66e-22 94.4
MsG0780036970.01.T03 MTR_7g086780 67.241 58 18 1 39 96 100 156 8.56e-22 95.5
MsG0780036970.01.T03 MTR_5g041530 68.966 58 17 1 40 97 142 198 1.36e-21 94.4
MsG0780036970.01.T03 MTR_6g027460 67.308 52 17 0 39 90 97 148 3.19e-21 93.2
MsG0780036970.01.T03 MTR_5g041380 62.295 61 23 0 40 100 129 189 2.14e-20 90.9
MsG0780036970.01.T03 MTR_5g041400 62.295 61 23 0 40 100 121 181 2.54e-20 90.5
MsG0780036970.01.T01 MTR_7g024670 91.755 376 25 4 1 373 1 373 0.0 624
MsG0780036970.01.T01 MTR_4g022370 37.634 372 196 12 1 360 1 348 1.58e-50 173
MsG0780036970.01.T01 MTR_2g096740 40.753 292 89 13 1 274 1 226 4.43e-46 160
MsG0780036970.01.T01 MTR_4g063780 37.568 370 171 15 1 352 1 328 1.71e-45 159
MsG0780036970.01.T01 MTR_7g059400 39.209 278 133 7 1 276 1 244 2.88e-44 156
MsG0780036970.01.T01 MTR_2g096740 40.288 278 95 12 1 274 1 211 5.68e-44 154
MsG0780036970.01.T01 MTR_8g479350 77.778 63 14 0 78 140 69 131 1.74e-31 122
MsG0780036970.01.T01 MTR_8g068210 57.143 91 29 1 51 141 16 96 2.34e-30 119
MsG0780036970.01.T01 MTR_8g079060 59.551 89 29 2 79 161 31 118 4.59e-30 115
MsG0780036970.01.T01 MTR_4g088580 74.194 62 16 0 78 139 56 117 1.29e-29 117
MsG0780036970.01.T01 MTR_3g091820 57.609 92 34 1 40 131 11 97 6.65e-29 114
MsG0780036970.01.T01 MTR_8g015840 66.667 75 24 1 59 132 1 75 9.26e-29 111
MsG0780036970.01.T01 MTR_2g014060 56.311 103 37 2 62 157 11 112 1.11e-28 114
MsG0780036970.01.T01 MTR_3g090430 38.854 157 85 2 35 191 9 154 1.93e-28 113
MsG0780036970.01.T01 MTR_5g031440 88.000 50 6 0 78 127 44 93 2.27e-28 113
MsG0780036970.01.T01 MTR_4g109980 86.538 52 7 0 76 127 39 90 2.43e-28 113
MsG0780036970.01.T01 MTR_3g077750 57.778 90 33 2 38 127 27 111 3.29e-28 113
MsG0780036970.01.T01 MTR_4g461080 83.333 54 9 0 76 129 28 81 6.19e-28 111
MsG0780036970.01.T01 MTR_8g027295 72.464 69 14 1 79 142 26 94 2.28e-27 109
MsG0780036970.01.T01 MTR_1g077600 54.217 83 38 0 51 133 17 99 3.39e-27 108
MsG0780036970.01.T01 MTR_1g077600 54.217 83 38 0 51 133 17 99 3.88e-27 109
MsG0780036970.01.T01 MTR_2g093220 78.571 56 12 0 76 131 39 94 6.63e-27 108
MsG0780036970.01.T01 MTR_2g059540 88.000 50 6 0 76 125 30 79 1.17e-26 105
MsG0780036970.01.T01 MTR_2g014170 86.000 50 7 0 76 125 44 93 2.52e-26 107
MsG0780036970.01.T01 MTR_1g056810 79.245 53 11 0 79 131 14 66 5.92e-26 105
MsG0780036970.01.T01 MTR_2g013370 69.697 66 18 1 69 134 38 101 8.20e-26 105
MsG0780036970.01.T01 MTR_4g089095 73.770 61 14 1 74 134 47 105 2.01e-25 104
MsG0780036970.01.T01 MTR_4g089095 73.770 61 14 1 74 134 13 71 2.80e-25 103
MsG0780036970.01.T01 MTR_6g012450 76.471 51 12 0 79 129 138 188 2.12e-23 101
MsG0780036970.01.T01 MTR_2g016030 76.000 50 12 0 79 128 49 98 2.35e-23 95.5
MsG0780036970.01.T01 MTR_7g010950 74.510 51 13 0 79 129 137 187 1.01e-22 99.8
MsG0780036970.01.T01 MTR_4g082060 56.962 79 23 2 79 157 124 191 1.08e-22 99.4
MsG0780036970.01.T01 MTR_8g044220 69.811 53 16 0 79 131 120 172 1.62e-22 98.6
MsG0780036970.01.T01 MTR_3g435480 67.213 61 16 1 79 139 138 194 2.48e-22 98.2
MsG0780036970.01.T01 MTR_6g027450 71.154 52 15 0 78 129 90 141 6.89e-22 95.5
MsG0780036970.01.T01 MTR_5g041420 70.588 51 15 0 79 129 140 190 8.99e-22 95.1
MsG0780036970.01.T01 MTR_7g086780 67.241 58 18 1 78 135 100 156 1.23e-21 95.9
MsG0780036970.01.T01 MTR_5g041530 68.966 58 17 1 79 136 142 198 1.87e-21 95.1
MsG0780036970.01.T01 MTR_6g027460 67.308 52 17 0 78 129 97 148 3.87e-21 94.0
MsG0780036970.01.T01 MTR_5g041380 36.723 177 88 7 24 192 79 239 4.27e-21 94.0
MsG0780036970.01.T01 MTR_5g041400 43.548 124 47 4 79 192 121 231 1.67e-20 92.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780036970.01.T02 AT3G55370 38.754 289 126 13 4 274 46 301 2.49e-38 139
MsG0780036970.01.T02 AT3G55370 42.534 221 96 8 4 223 46 236 2.92e-37 135
MsG0780036970.01.T02 AT3G55370 42.534 221 96 8 4 223 91 281 3.43e-37 137
MsG0780036970.01.T02 AT2G28810 36.177 293 132 7 22 302 62 311 2.90e-35 130
MsG0780036970.01.T02 AT2G28810 36.177 293 132 7 22 302 79 328 3.26e-35 130
MsG0780036970.01.T02 AT2G37590 72.152 79 20 1 16 94 69 145 6.13e-35 130
MsG0780036970.01.T02 AT1G07640 39.116 294 147 10 19 305 4 272 1.81e-34 127
MsG0780036970.01.T02 AT1G07640 37.793 299 154 10 14 305 55 328 1.88e-34 128
MsG0780036970.01.T02 AT1G07640 39.130 299 150 10 14 305 63 336 2.10e-34 129
MsG0780036970.01.T02 AT5G02460 70.130 77 21 1 16 92 75 149 1.09e-32 125
MsG0780036970.01.T02 AT1G51700 79.032 62 13 0 39 100 34 95 4.06e-31 116
MsG0780036970.01.T02 AT5G65590 80.328 61 12 0 39 99 42 102 1.99e-30 117
MsG0780036970.01.T02 AT1G21340 56.322 87 37 1 10 95 9 95 3.57e-30 115
MsG0780036970.01.T02 AT5G60200 71.212 66 17 1 37 102 54 117 3.59e-30 115
MsG0780036970.01.T02 AT2G28510 77.273 66 13 1 34 99 44 107 4.10e-30 116
MsG0780036970.01.T02 AT3G21270 83.929 56 9 0 39 94 30 85 1.44e-29 112
MsG0780036970.01.T02 AT5G60850 63.855 83 26 2 28 106 38 120 3.03e-29 114
MsG0780036970.01.T02 AT3G45610 43.262 141 62 4 1 134 11 140 3.54e-29 112
MsG0780036970.01.T02 AT4G38000 67.105 76 25 0 39 114 42 117 3.66e-29 112
MsG0780036970.01.T02 AT5G66940 69.841 63 19 0 40 102 34 96 1.09e-28 110
MsG0780036970.01.T02 AT5G62940 88.235 51 6 0 38 88 73 123 2.23e-28 113
MsG0780036970.01.T02 AT3G52440 64.103 78 25 2 34 109 21 97 1.25e-27 108
MsG0780036970.01.T02 AT3G50410 75.439 57 14 0 40 96 32 88 1.68e-27 108
MsG0780036970.01.T02 AT3G52440 64.103 78 25 2 34 109 40 116 1.86e-27 108
MsG0780036970.01.T02 AT1G28310 75.439 57 14 0 39 95 28 84 3.34e-27 108
MsG0780036970.01.T02 AT1G28310 75.439 57 14 0 39 95 52 108 4.31e-27 108
MsG0780036970.01.T02 AT4G00940 60.274 73 29 0 20 92 50 122 7.00e-26 105
MsG0780036970.01.T02 AT4G00940 60.274 73 29 0 20 92 50 122 7.00e-26 105
MsG0780036970.01.T02 AT4G00940 60.274 73 29 0 20 92 50 122 7.00e-26 105
MsG0780036970.01.T02 AT4G21050 64.706 68 23 1 37 104 23 89 1.58e-25 102
MsG0780036970.01.T02 AT3G61850 67.164 67 19 1 40 106 64 127 1.81e-25 103
MsG0780036970.01.T02 AT3G61850 67.164 67 19 1 40 106 64 127 1.81e-25 103
MsG0780036970.01.T02 AT3G61850 67.164 67 19 1 40 106 76 139 1.95e-25 103
MsG0780036970.01.T02 AT3G61850 67.164 67 19 1 40 106 64 127 2.28e-25 103
MsG0780036970.01.T02 AT3G61850 67.164 67 19 1 40 106 76 139 2.94e-25 103
MsG0780036970.01.T02 AT4G24060 75.000 56 14 0 37 92 52 107 3.29e-25 103
MsG0780036970.01.T02 AT1G47655 75.000 52 13 0 35 86 26 77 1.64e-23 96.7
MsG0780036970.01.T02 AT2G46590 84.783 46 7 0 40 85 70 115 2.75e-23 99.0
MsG0780036970.01.T02 AT2G46590 84.783 46 7 0 40 85 82 127 2.99e-23 99.0
MsG0780036970.01.T02 AT3G47500 74.510 51 13 0 40 90 112 162 3.48e-23 99.8
MsG0780036970.01.T02 AT1G29160 75.472 53 12 1 40 92 64 115 3.77e-23 94.7
MsG0780036970.01.T02 AT2G34140 75.472 53 12 1 40 92 60 111 4.05e-23 94.4
MsG0780036970.01.T02 AT1G64620 76.471 51 12 0 37 87 48 98 5.44e-23 98.2
MsG0780036970.01.T02 AT1G69570 74.510 51 13 0 40 90 134 184 1.30e-22 97.4
MsG0780036970.01.T02 AT5G62430 54.167 72 32 1 19 90 36 106 2.16e-22 95.5
MsG0780036970.01.T02 AT5G39660 74.510 51 13 0 40 90 140 190 3.80e-22 96.7
MsG0780036970.01.T02 AT5G39660 74.510 51 13 0 40 90 140 190 3.80e-22 96.7
MsG0780036970.01.T02 AT5G39660 74.510 51 13 0 40 90 140 190 3.80e-22 96.7
MsG0780036970.01.T02 AT4G21040 63.077 65 22 1 40 104 27 89 8.07e-22 92.4
MsG0780036970.01.T02 AT1G26790 50.633 79 37 1 12 90 87 163 9.09e-22 94.7
MsG0780036970.01.T02 AT4G21080 51.220 82 39 1 40 120 27 108 7.10e-21 90.5
MsG0780036970.01.T02 AT4G21030 57.692 52 22 0 40 91 23 74 2.97e-14 70.9
MsG0780036970.01.T03 AT3G55370 38.832 291 120 14 4 271 46 301 3.58e-38 139
MsG0780036970.01.T03 AT3G55370 42.601 223 90 9 4 220 91 281 4.92e-37 136
MsG0780036970.01.T03 AT3G55370 42.601 223 90 9 4 220 46 236 6.19e-37 135
MsG0780036970.01.T03 AT1G07640 38.699 292 148 11 19 302 4 272 3.77e-35 129
MsG0780036970.01.T03 AT1G07640 38.721 297 151 11 14 302 55 328 4.82e-35 130
MsG0780036970.01.T03 AT2G37590 72.152 79 20 1 16 94 69 145 5.30e-35 130
MsG0780036970.01.T03 AT1G07640 38.721 297 151 11 14 302 63 336 5.97e-35 130
MsG0780036970.01.T03 AT2G28810 34.364 291 137 8 22 299 79 328 1.76e-33 126
MsG0780036970.01.T03 AT2G28810 34.364 291 137 8 22 299 62 311 1.89e-33 125
MsG0780036970.01.T03 AT5G02460 70.130 77 21 1 16 92 75 149 1.04e-32 125
MsG0780036970.01.T03 AT1G51700 47.692 130 52 3 39 163 34 152 3.76e-31 116
MsG0780036970.01.T03 AT5G65590 80.328 61 12 0 39 99 42 102 1.82e-30 117
MsG0780036970.01.T03 AT5G60200 58.242 91 31 3 37 122 54 142 1.90e-30 116
MsG0780036970.01.T03 AT1G21340 56.322 87 37 1 10 95 9 95 3.24e-30 115
MsG0780036970.01.T03 AT2G28510 77.273 66 13 1 34 99 44 107 3.57e-30 116
MsG0780036970.01.T03 AT5G66940 55.319 94 33 1 40 124 34 127 1.01e-29 113
MsG0780036970.01.T03 AT3G21270 83.929 56 9 0 39 94 30 85 1.42e-29 112
MsG0780036970.01.T03 AT5G60850 63.855 83 26 2 28 106 38 120 3.57e-29 114
MsG0780036970.01.T03 AT3G45610 51.961 102 38 2 1 102 11 101 6.81e-29 111
MsG0780036970.01.T03 AT5G62940 88.235 51 6 0 38 88 73 123 2.27e-28 113
MsG0780036970.01.T03 AT4G38000 66.216 74 25 0 39 112 42 115 7.22e-28 108
MsG0780036970.01.T03 AT3G50410 75.439 57 14 0 40 96 32 88 1.65e-27 108
MsG0780036970.01.T03 AT1G28310 75.439 57 14 0 39 95 28 84 3.24e-27 108
MsG0780036970.01.T03 AT3G52440 46.667 120 51 3 34 153 21 127 4.43e-27 107
MsG0780036970.01.T03 AT1G28310 75.439 57 14 0 39 95 52 108 4.67e-27 108
MsG0780036970.01.T03 AT3G52440 70.769 65 18 1 34 98 40 103 6.99e-27 107
MsG0780036970.01.T03 AT4G00940 60.274 73 29 0 20 92 50 122 5.91e-26 105
MsG0780036970.01.T03 AT4G00940 60.274 73 29 0 20 92 50 122 5.91e-26 105
MsG0780036970.01.T03 AT4G00940 60.274 73 29 0 20 92 50 122 5.91e-26 105
MsG0780036970.01.T03 AT3G61850 45.312 128 68 2 40 166 64 190 6.21e-26 104
MsG0780036970.01.T03 AT3G61850 45.312 128 68 2 40 166 64 190 6.21e-26 104
MsG0780036970.01.T03 AT3G61850 45.312 128 68 2 40 166 76 202 6.38e-26 105
MsG0780036970.01.T03 AT4G21050 58.750 80 32 1 37 116 23 101 9.78e-26 102
MsG0780036970.01.T03 AT3G61850 62.857 70 26 0 40 109 64 133 1.70e-25 104
MsG0780036970.01.T03 AT3G61850 62.857 70 26 0 40 109 76 145 1.89e-25 104
MsG0780036970.01.T03 AT4G24060 75.000 56 14 0 37 92 52 107 3.44e-25 103
MsG0780036970.01.T03 AT1G47655 75.000 52 13 0 35 86 26 77 1.68e-23 96.3
MsG0780036970.01.T03 AT2G46590 84.783 46 7 0 40 85 70 115 2.66e-23 99.0
MsG0780036970.01.T03 AT2G46590 84.783 46 7 0 40 85 82 127 3.19e-23 99.0
MsG0780036970.01.T03 AT3G47500 74.510 51 13 0 40 90 112 162 3.63e-23 99.8
MsG0780036970.01.T03 AT1G29160 75.472 53 12 1 40 92 64 115 4.50e-23 94.4
MsG0780036970.01.T03 AT2G34140 75.472 53 12 1 40 92 60 111 4.89e-23 94.0
MsG0780036970.01.T03 AT1G64620 76.471 51 12 0 37 87 48 98 6.17e-23 97.8
MsG0780036970.01.T03 AT1G69570 74.510 51 13 0 40 90 134 184 1.38e-22 97.4
MsG0780036970.01.T03 AT5G62430 54.167 72 32 1 19 90 36 106 2.11e-22 95.5
MsG0780036970.01.T03 AT5G39660 74.510 51 13 0 40 90 140 190 4.16e-22 96.7
MsG0780036970.01.T03 AT5G39660 74.510 51 13 0 40 90 140 190 4.16e-22 96.7
MsG0780036970.01.T03 AT5G39660 74.510 51 13 0 40 90 140 190 4.16e-22 96.7
MsG0780036970.01.T03 AT4G21040 63.077 65 22 1 40 104 27 89 8.34e-22 92.4
MsG0780036970.01.T03 AT1G26790 50.633 79 37 1 12 90 87 163 9.91e-22 94.7
MsG0780036970.01.T03 AT4G21080 56.757 74 30 1 40 113 27 98 5.26e-21 90.5
MsG0780036970.01.T03 AT4G21030 57.692 52 22 0 40 91 23 74 3.03e-14 70.5
MsG0780036970.01.T01 AT3G55370 37.356 348 148 17 1 325 1 301 8.53e-43 152
MsG0780036970.01.T01 AT3G55370 40.000 280 118 12 1 274 1 236 7.61e-42 149
MsG0780036970.01.T01 AT3G55370 39.382 259 112 10 17 274 67 281 1.69e-37 139
MsG0780036970.01.T01 AT2G37590 48.980 147 59 3 1 133 1 145 6.23e-36 134
MsG0780036970.01.T01 AT1G07640 70.732 82 22 1 53 134 55 134 5.01e-34 129
MsG0780036970.01.T01 AT1G07640 70.732 82 22 1 53 134 63 142 6.51e-34 129
MsG0780036970.01.T01 AT1G07640 72.727 77 19 1 58 134 4 78 7.28e-34 127
MsG0780036970.01.T01 AT2G28810 32.391 389 166 12 1 353 1 328 5.34e-33 126
MsG0780036970.01.T01 AT5G02460 70.130 77 21 1 55 131 75 149 2.77e-32 125
MsG0780036970.01.T01 AT2G28810 35.410 305 130 9 61 353 62 311 1.04e-31 122
MsG0780036970.01.T01 AT1G51700 79.032 62 13 0 78 139 34 95 8.41e-31 116
MsG0780036970.01.T01 AT5G60200 58.889 90 31 2 76 161 54 141 3.19e-30 117
MsG0780036970.01.T01 AT5G65590 80.328 61 12 0 78 138 42 102 3.81e-30 118
MsG0780036970.01.T01 AT2G28510 77.273 66 13 1 73 138 44 107 6.42e-30 116
MsG0780036970.01.T01 AT1G21340 56.322 87 37 1 49 134 9 95 9.65e-30 115
MsG0780036970.01.T01 AT5G66940 52.294 109 45 2 79 180 34 142 9.76e-30 114
MsG0780036970.01.T01 AT5G60850 56.989 93 33 2 67 152 38 130 1.59e-29 116
MsG0780036970.01.T01 AT3G21270 83.929 56 9 0 78 133 30 85 3.08e-29 112
MsG0780036970.01.T01 AT3G45610 51.456 103 39 2 39 141 10 101 1.35e-28 112
MsG0780036970.01.T01 AT5G62940 88.235 51 6 0 77 127 73 123 4.26e-28 113
MsG0780036970.01.T01 AT4G38000 71.212 66 19 0 78 143 42 107 2.07e-27 108
MsG0780036970.01.T01 AT3G50410 75.439 57 14 0 79 135 32 88 2.85e-27 108
MsG0780036970.01.T01 AT1G28310 75.439 57 14 0 78 134 28 84 4.83e-27 109
MsG0780036970.01.T01 AT1G28310 75.439 57 14 0 78 134 52 108 6.94e-27 109
MsG0780036970.01.T01 AT3G52440 57.143 91 32 2 72 162 20 103 7.68e-27 107
MsG0780036970.01.T01 AT3G52440 64.474 76 24 2 73 146 40 114 1.23e-26 107
MsG0780036970.01.T01 AT4G00940 60.274 73 29 0 59 131 50 122 1.21e-25 105
MsG0780036970.01.T01 AT4G00940 60.274 73 29 0 59 131 50 122 1.21e-25 105
MsG0780036970.01.T01 AT4G00940 60.274 73 29 0 59 131 50 122 1.21e-25 105
MsG0780036970.01.T01 AT4G21050 64.706 68 23 1 76 143 23 89 2.52e-25 102
MsG0780036970.01.T01 AT3G61850 62.857 70 26 0 79 148 76 145 2.86e-25 104
MsG0780036970.01.T01 AT3G61850 62.857 70 26 0 79 148 64 133 2.86e-25 103
MsG0780036970.01.T01 AT3G61850 62.857 70 26 0 79 148 64 133 2.86e-25 103
MsG0780036970.01.T01 AT3G61850 62.857 70 26 0 79 148 76 145 4.01e-25 104
MsG0780036970.01.T01 AT3G61850 62.857 70 26 0 79 148 64 133 4.02e-25 104
MsG0780036970.01.T01 AT4G24060 75.000 56 14 0 76 131 52 107 5.24e-25 104
MsG0780036970.01.T01 AT1G47655 75.000 52 13 0 74 125 26 77 3.57e-23 96.7
MsG0780036970.01.T01 AT2G46590 84.783 46 7 0 79 124 70 115 4.44e-23 99.4
MsG0780036970.01.T01 AT2G46590 84.783 46 7 0 79 124 82 127 4.80e-23 99.4
MsG0780036970.01.T01 AT1G29160 75.472 53 12 1 79 131 64 115 6.23e-23 94.7
MsG0780036970.01.T01 AT3G47500 74.510 51 13 0 79 129 112 162 6.32e-23 100
MsG0780036970.01.T01 AT2G34140 75.472 53 12 1 79 131 60 111 7.09e-23 94.7
MsG0780036970.01.T01 AT1G64620 76.471 51 12 0 76 126 48 98 1.04e-22 98.2
MsG0780036970.01.T01 AT1G69570 74.510 51 13 0 79 129 134 184 1.85e-22 98.2
MsG0780036970.01.T01 AT5G39660 55.000 80 25 2 79 158 140 208 2.50e-22 98.2
MsG0780036970.01.T01 AT5G39660 55.000 80 25 2 79 158 140 208 2.50e-22 98.2
MsG0780036970.01.T01 AT5G39660 55.000 80 25 2 79 158 140 208 2.50e-22 98.2
MsG0780036970.01.T01 AT5G62430 54.167 72 32 1 58 129 36 106 4.05e-22 95.5
MsG0780036970.01.T01 AT4G21040 63.077 65 22 1 79 143 27 89 1.19e-21 92.8
MsG0780036970.01.T01 AT1G26790 50.633 79 37 1 51 129 87 163 1.53e-21 95.1
MsG0780036970.01.T01 AT4G21080 61.538 65 23 1 79 143 27 89 1.27e-20 90.5
MsG0780036970.01.T01 AT4G21030 57.692 52 22 0 79 130 23 74 3.10e-14 71.2

Find 88 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAAACTTGTCGTCGTTAT+TGG 0.174969 7:-17347337 MsG0780036970.01.T01:CDS
AAGAAATTTGTTTCGTTCTA+AGG 0.177053 7:-17346769 MsG0780036970.01.T01:CDS
GAAATAGTAATGATCTATTT+TGG 0.191335 7:-17346632 MsG0780036970.01.T01:CDS
CAAATTGGATTATTTCAATT+TGG 0.211059 7:-17346816 MsG0780036970.01.T01:CDS
AGTAATTTGCAACCACAAAT+TGG 0.232158 7:-17346831 MsG0780036970.01.T01:CDS
GCAAATTCTTCTTCTAATAA+TGG 0.247534 7:-17347152 MsG0780036970.01.T01:CDS
GTGCTGCTGCAGCATCATTC+TGG 0.303371 7:+17347441 None:intergenic
CAATTTGGTGGAGAAAATAA+TGG 0.326366 7:-17346801 MsG0780036970.01.T01:CDS
TGAGGGCATTGGTTCTTTGT+TGG 0.348674 7:-17347030 MsG0780036970.01.T01:CDS
TGGAGATGATCGTTATGATT+AGG 0.351307 7:+17347215 None:intergenic
CTTGGTAGTGGTTCTTCAAT+TGG 0.353175 7:-17346963 MsG0780036970.01.T01:CDS
TTTAATCAGCAAGTAGGAAT+TGG 0.368947 7:-17347602 MsG0780036970.01.T01:intron
TGATGAACTTGTAGCGAATT+CGG 0.372887 7:+17346882 None:intergenic
CAGGTCGGTGCCGGTGCTGC+TGG 0.390469 7:-17347194 MsG0780036970.01.T01:CDS
AATTGAAATAATCCAATTTG+TGG 0.391831 7:+17346819 None:intergenic
CTGTTGGAGGTGGTTGTAGA+AGG 0.393447 7:-17347286 MsG0780036970.01.T01:CDS
GAACGAAACAAATTTCTTTG+TGG 0.401844 7:+17346774 None:intergenic
CATTGTTCACCAATGCCATT+TGG 0.402281 7:+17346912 None:intergenic
TTGGGTGGATCTAGATAGAT+TGG 0.404500 7:+17347954 None:intergenic
CTAGATAGATTGGGAGGGAG+GGG 0.407945 7:+17347964 None:intergenic
GTGTTTGTTGATTCACATCT+TGG 0.421696 7:+17347410 None:intergenic
TCTATCTAGATCCACCCAAC+TGG 0.440222 7:-17347950 MsG0780036970.01.T01:CDS
ATTGGATTATTTCAATTTGG+TGG 0.443223 7:-17346813 MsG0780036970.01.T01:CDS
TATTCTTCAAGTGTTAGTAT+TGG 0.447776 7:-17346741 MsG0780036970.01.T01:CDS
CAGCAGCACCGGCACCGACC+TGG 0.456075 7:+17347195 None:intergenic
AACCAAAAGCACTAGATTTG+AGG 0.456139 7:+17346537 None:intergenic
TCAAGTTAATACAGTTAAAG+TGG 0.456282 7:-17346709 MsG0780036970.01.T01:CDS
GGTTGCAAATTACTCAAGAA+AGG 0.462145 7:+17346840 None:intergenic
TGGAATGGAAATGGAGGAAG+TGG 0.464435 7:-17346612 MsG0780036970.01.T01:CDS
GTTACAAATGGAAATTGTGT+TGG 0.468460 7:+17347089 None:intergenic
TCTAGATAGATTGGGAGGGA+GGG 0.471768 7:+17347963 None:intergenic
CTTCTACAACCACCTCCAAC+AGG 0.475660 7:+17347287 None:intergenic
CGAAACGTTCCTGTTGGAGG+TGG 0.475928 7:-17347296 MsG0780036970.01.T01:CDS
TCTTCAATTGGTAATGGTAA+TGG 0.476358 7:-17346951 MsG0780036970.01.T01:CDS
ATCTAGATAGATTGGGAGGG+AGG 0.477475 7:+17347962 None:intergenic
TCCACCCAACTGGACACAAC+AGG 0.479085 7:-17347940 MsG0780036970.01.T01:intron
CGATCTAAAGAGGTTACAAA+TGG 0.480214 7:+17347077 None:intergenic
AGTGGTTCTTCAATTGGTAA+TGG 0.485640 7:-17346957 MsG0780036970.01.T01:CDS
GCTCGATCGGTCATTGATAC+TGG 0.489149 7:+17347482 None:intergenic
CTTCGAAACGTTCCTGTTGG+AGG 0.496892 7:-17347299 MsG0780036970.01.T01:CDS
GTTGAGTTTCAACTTGGTAG+TGG 0.507591 7:-17346975 MsG0780036970.01.T01:CDS
ATACTGGTCTTCTAGACCCT+TGG 0.510341 7:+17347498 None:intergenic
AGTTATGTTTCTGAGGGCAT+TGG 0.510514 7:-17347041 MsG0780036970.01.T01:CDS
GTTGCAAATTACTCAAGAAA+GGG 0.514735 7:+17346841 None:intergenic
GGAAATTGTGTTGGAAAATG+AGG 0.514769 7:+17347098 None:intergenic
CAAGGTGGTGAATTGAAACT+AGG 0.516282 7:+17346564 None:intergenic
CAGCAAGTAGGAATTGGTAT+TGG 0.517909 7:-17347596 MsG0780036970.01.T01:CDS
GATCATCTCCAGGTCGGTGC+CGG 0.519214 7:-17347203 MsG0780036970.01.T01:CDS
GGCTCTTTGTTGATACCAAA+TGG 0.520108 7:-17346927 MsG0780036970.01.T01:CDS
CGACAATAGTTATGTTTCTG+AGG 0.521037 7:-17347048 MsG0780036970.01.T01:CDS
GACAATAGTTATGTTTCTGA+GGG 0.522293 7:-17347047 MsG0780036970.01.T01:CDS
CTGGTGGTTCTAGCTCAGCA+AGG 0.527734 7:-17347175 MsG0780036970.01.T01:CDS
GAAGCTGATGGCAGCTACCA+AGG 0.530104 7:-17347515 MsG0780036970.01.T01:CDS
GCTAGAACCACCAGCAGCAC+CGG 0.537679 7:+17347184 None:intergenic
AATACCTGTTGTGTCCAGTT+GGG 0.542054 7:+17347936 None:intergenic
GCACTTCGAAACGTTCCTGT+TGG 0.543248 7:-17347302 MsG0780036970.01.T01:CDS
ACTTTAACTGTATTAACTTG+AGG 0.543542 7:+17346711 None:intergenic
ACCTGTTGTGTCCAGTTGGG+TGG 0.544400 7:+17347939 None:intergenic
GTCGCTATGACGATCTAAAG+AGG 0.549924 7:+17347067 None:intergenic
ACTAATTCTAATGTGAATGT+TGG 0.552195 7:-17347125 MsG0780036970.01.T01:CDS
CACTAGATTTGAGGATCACA+AGG 0.554201 7:+17346546 None:intergenic
AAATAATTTAATCAGCAAGT+AGG 0.559549 7:-17347608 MsG0780036970.01.T01:intron
GTGGAAGAAAACAATCATCA+AGG 0.560168 7:-17346690 MsG0780036970.01.T01:CDS
CTTTGACATCTTAGCTCGAT+CGG 0.562486 7:+17347469 None:intergenic
TGGGTGGATCTAGATAGATT+GGG 0.569105 7:+17347955 None:intergenic
TAATCATAACGATCATCTCC+AGG 0.573464 7:-17347213 MsG0780036970.01.T01:CDS
GTCGGTGCCGGTGCTGCTGG+TGG 0.577708 7:-17347191 MsG0780036970.01.T01:CDS
GTAGCTGCCATCAGCTTCAA+CGG 0.578179 7:+17347520 None:intergenic
TCAATTGGTAATGGTAATGG+TGG 0.579040 7:-17346948 MsG0780036970.01.T01:CDS
TAATACCTGTTGTGTCCAGT+TGG 0.582298 7:+17347935 None:intergenic
TCGTTATGATTAGGTTTCAG+AGG 0.584218 7:+17347224 None:intergenic
CGTCGTTATTGGACTAGAGG+TGG 0.585783 7:-17347326 MsG0780036970.01.T01:CDS
TCTGTCACCGTTGAAGCTGA+TGG 0.588932 7:-17347527 MsG0780036970.01.T01:CDS
ACTAATGTTGAGTTTCAACT+TGG 0.589155 7:-17346981 MsG0780036970.01.T01:CDS
AAGCTGATGGCAGCTACCAA+GGG 0.593247 7:-17347514 MsG0780036970.01.T01:CDS
GAAGTGGTAATGAAAATGCA+TGG 0.593866 7:-17346596 MsG0780036970.01.T01:CDS
CAAATGGCATTGGTGAACAA+TGG 0.594140 7:-17346911 MsG0780036970.01.T01:CDS
TGTCGTCGTTATTGGACTAG+AGG 0.602398 7:-17347329 MsG0780036970.01.T01:CDS
ATGGCATTGGTGAACAATGG+AGG 0.607659 7:-17346908 MsG0780036970.01.T01:CDS
TTGTTGATACCAAATGGCAT+TGG 0.626903 7:-17346921 MsG0780036970.01.T01:CDS
GATAGCGGTTGCAAAGCTGA+TGG 0.634025 7:+17347563 None:intergenic
TGGTGGTTCTAGCTCAGCAA+GGG 0.640666 7:-17347174 MsG0780036970.01.T01:CDS
TGGGAGGGAGGGGAAGACCA+TGG 0.641218 7:+17347974 None:intergenic
TGGATCTAGATAGATTGGGA+GGG 0.641448 7:+17347959 None:intergenic
GTGGATCTAGATAGATTGGG+AGG 0.647429 7:+17347958 None:intergenic
GACATCGTTGAAGCTGATAG+CGG 0.680206 7:+17347548 None:intergenic
CATAACGATCATCTCCAGGT+CGG 0.682152 7:-17347209 MsG0780036970.01.T01:CDS
TAGATTTGAGGATCACAAGG+TGG 0.736101 7:+17346549 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAGCAAAATAAAATTA+AGG + Chr7:17346662-17346681 None:intergenic 10.0%
!!! TATTTTATAACAAAAGTGTA+AGG + Chr7:17346897-17346916 None:intergenic 15.0%
!! AAATAATTTAATCAGCAAGT+AGG - Chr7:17346912-17346931 MsG0780036970.01.T01:CDS 20.0%
!! AATTGAAATAATCCAATTTG+TGG + Chr7:17347704-17347723 None:intergenic 20.0%
!! AGAAAGAAAAAGTGAAAAAA+AGG + Chr7:17346685-17346704 None:intergenic 20.0%
!! CAAATTGGATTATTTCAATT+TGG - Chr7:17347704-17347723 MsG0780036970.01.T01:intron 20.0%
!!! GAAATAGTAATGATCTATTT+TGG - Chr7:17347888-17347907 MsG0780036970.01.T01:intron 20.0%
! ACTAATTCTAATGTGAATGT+TGG - Chr7:17347395-17347414 MsG0780036970.01.T01:CDS 25.0%
! ATTGGATTATTTCAATTTGG+TGG - Chr7:17347707-17347726 MsG0780036970.01.T01:intron 25.0%
! GCAAATTCTTCTTCTAATAA+TGG - Chr7:17347368-17347387 MsG0780036970.01.T01:CDS 25.0%
! TATTCTTCAAGTGTTAGTAT+TGG - Chr7:17347779-17347798 MsG0780036970.01.T01:intron 25.0%
! TCAAGTTAATACAGTTAAAG+TGG - Chr7:17347811-17347830 MsG0780036970.01.T01:intron 25.0%
!! AAGAAATTTGTTTCGTTCTA+AGG - Chr7:17347751-17347770 MsG0780036970.01.T01:intron 25.0%
!! ACTTTAACTGTATTAACTTG+AGG + Chr7:17347812-17347831 None:intergenic 25.0%
!! AGTACTATTGCTCATATTTT+TGG + Chr7:17347516-17347535 None:intergenic 25.0%
!!! AGTAATGATCTATTTTGGAA+TGG - Chr7:17347893-17347912 MsG0780036970.01.T01:intron 25.0%
AAAAATCTCTTGAATGGTTC+AGG - Chr7:17347866-17347885 MsG0780036970.01.T01:intron 30.0%
ACTAATGTTGAGTTTCAACT+TGG - Chr7:17347539-17347558 MsG0780036970.01.T01:CDS 30.0%
AGATTGATTATAGTGTGTGT+AGG + Chr7:17346763-17346782 None:intergenic 30.0%
GAACGAAACAAATTTCTTTG+TGG + Chr7:17347749-17347768 None:intergenic 30.0%
GTTACAAATGGAAATTGTGT+TGG + Chr7:17347434-17347453 None:intergenic 30.0%
GTTGCAAATTACTCAAGAAA+GGG + Chr7:17347682-17347701 None:intergenic 30.0%
TTGCCAAAAAATCTCTTGAA+TGG - Chr7:17347860-17347879 MsG0780036970.01.T01:intron 30.0%
TTTAATCAGCAAGTAGGAAT+TGG - Chr7:17346918-17346937 MsG0780036970.01.T01:CDS 30.0%
! AGTAATTTGCAACCACAAAT+TGG - Chr7:17347689-17347708 MsG0780036970.01.T01:intron 30.0%
! CAATTTGGTGGAGAAAATAA+TGG - Chr7:17347719-17347738 MsG0780036970.01.T01:intron 30.0%
! GACAATAGTTATGTTTCTGA+GGG - Chr7:17347473-17347492 MsG0780036970.01.T01:CDS 30.0%
!! TCTTCAATTGGTAATGGTAA+TGG - Chr7:17347569-17347588 MsG0780036970.01.T01:CDS 30.0%
!!! GAACCATTCAAGAGATTTTT+TGG + Chr7:17347866-17347885 None:intergenic 30.0%
!!! GATCTATTTTGGAATGGAAA+TGG - Chr7:17347899-17347918 MsG0780036970.01.T01:intron 30.0%
AGTGGTTCTTCAATTGGTAA+TGG - Chr7:17347563-17347582 MsG0780036970.01.T01:CDS 35.0%
CGATCTAAAGAGGTTACAAA+TGG + Chr7:17347446-17347465 None:intergenic 35.0%
GGAAATTGTGTTGGAAAATG+AGG + Chr7:17347425-17347444 None:intergenic 35.0%
GGTTGCAAATTACTCAAGAA+AGG + Chr7:17347683-17347702 None:intergenic 35.0%
GTGGAAGAAAACAATCATCA+AGG - Chr7:17347830-17347849 MsG0780036970.01.T01:intron 35.0%
TAATCATAACGATCATCTCC+AGG - Chr7:17347307-17347326 MsG0780036970.01.T01:CDS 35.0%
TCGTTATGATTAGGTTTCAG+AGG + Chr7:17347299-17347318 None:intergenic 35.0%
TGATGAACTTGTAGCGAATT+CGG + Chr7:17347641-17347660 None:intergenic 35.0%
TGGAGATGATCGTTATGATT+AGG + Chr7:17347308-17347327 None:intergenic 35.0%
TTGTTGATACCAAATGGCAT+TGG - Chr7:17347599-17347618 MsG0780036970.01.T01:intron 35.0%
! CGACAATAGTTATGTTTCTG+AGG - Chr7:17347472-17347491 MsG0780036970.01.T01:CDS 35.0%
! GAAGTGGTAATGAAAATGCA+TGG - Chr7:17347924-17347943 MsG0780036970.01.T01:intron 35.0%
! GACGACAAGTTTTGCAAAAA+TGG + Chr7:17347178-17347197 None:intergenic 35.0%
!! GTGTTTGTTGATTCACATCT+TGG + Chr7:17347113-17347132 None:intergenic 35.0%
!! TCAATTGGTAATGGTAATGG+TGG - Chr7:17347572-17347591 MsG0780036970.01.T01:CDS 35.0%
!!! CTATTTTGGAATGGAAATGG+AGG - Chr7:17347902-17347921 MsG0780036970.01.T01:intron 35.0%
AATACCTGTTGTGTCCAGTT+GGG + Chr7:17346587-17346606 None:intergenic 40.0%
CAAGGTGGTGAATTGAAACT+AGG + Chr7:17347959-17347978 None:intergenic 40.0%
CAGCAAGTAGGAATTGGTAT+TGG - Chr7:17346924-17346943 MsG0780036970.01.T01:CDS 40.0%
CATTGTTCACCAATGCCATT+TGG + Chr7:17347611-17347630 None:intergenic 40.0%
CTTTGACATCTTAGCTCGAT+CGG + Chr7:17347054-17347073 None:intergenic 40.0%
GCAAAACTTGTCGTCGTTAT+TGG - Chr7:17347183-17347202 MsG0780036970.01.T01:CDS 40.0%
GGCTCTTTGTTGATACCAAA+TGG - Chr7:17347593-17347612 MsG0780036970.01.T01:CDS 40.0%
GTTGAGTTTCAACTTGGTAG+TGG - Chr7:17347545-17347564 MsG0780036970.01.T01:CDS 40.0%
TAATACCTGTTGTGTCCAGT+TGG + Chr7:17346588-17346607 None:intergenic 40.0%
TAGATTTGAGGATCACAAGG+TGG + Chr7:17347974-17347993 None:intergenic 40.0%
TGGATCTAGATAGATTGGGA+GGG + Chr7:17346564-17346583 None:intergenic 40.0%
TGGGTGGATCTAGATAGATT+GGG + Chr7:17346568-17346587 None:intergenic 40.0%
TTGGGTGGATCTAGATAGAT+TGG + Chr7:17346569-17346588 None:intergenic 40.0%
! AGTTATGTTTCTGAGGGCAT+TGG - Chr7:17347479-17347498 MsG0780036970.01.T01:CDS 40.0%
! CAAGTTTTGCAAAAATGGCG+TGG + Chr7:17347173-17347192 None:intergenic 40.0%
!! CAAATGGCATTGGTGAACAA+TGG - Chr7:17347609-17347628 MsG0780036970.01.T01:intron 40.0%
!! CTTGGTAGTGGTTCTTCAAT+TGG - Chr7:17347557-17347576 MsG0780036970.01.T01:CDS 40.0%
ATCTAGATAGATTGGGAGGG+AGG + Chr7:17346561-17346580 None:intergenic 45.0%
CATAACGATCATCTCCAGGT+CGG - Chr7:17347311-17347330 MsG0780036970.01.T01:CDS 45.0%
GACATCGTTGAAGCTGATAG+CGG + Chr7:17346975-17346994 None:intergenic 45.0%
GTCGCTATGACGATCTAAAG+AGG + Chr7:17347456-17347475 None:intergenic 45.0%
GTGGATCTAGATAGATTGGG+AGG + Chr7:17346565-17346584 None:intergenic 45.0%
TCTAGATAGATTGGGAGGGA+GGG + Chr7:17346560-17346579 None:intergenic 45.0%
TCTATCTAGATCCACCCAAC+TGG - Chr7:17346570-17346589 MsG0780036970.01.T01:CDS 45.0%
TGGAATGGAAATGGAGGAAG+TGG - Chr7:17347908-17347927 MsG0780036970.01.T01:intron 45.0%
! TGTCGTCGTTATTGGACTAG+AGG - Chr7:17347191-17347210 MsG0780036970.01.T01:CDS 45.0%
!! ATACTGGTCTTCTAGACCCT+TGG + Chr7:17347025-17347044 None:intergenic 45.0%
!! ATGGCATTGGTGAACAATGG+AGG - Chr7:17347612-17347631 MsG0780036970.01.T01:intron 45.0%
!! TGAGGGCATTGGTTCTTTGT+TGG - Chr7:17347490-17347509 MsG0780036970.01.T01:CDS 45.0%
AAGCTGATGGCAGCTACCAA+GGG - Chr7:17347006-17347025 MsG0780036970.01.T01:CDS 50.0%
CTAGATAGATTGGGAGGGAG+GGG + Chr7:17346559-17346578 None:intergenic 50.0%
CTGTTGGAGGTGGTTGTAGA+AGG - Chr7:17347234-17347253 MsG0780036970.01.T01:CDS 50.0%
CTTCGAAACGTTCCTGTTGG+AGG - Chr7:17347221-17347240 MsG0780036970.01.T01:CDS 50.0%
CTTCTACAACCACCTCCAAC+AGG + Chr7:17347236-17347255 None:intergenic 50.0%
GCACTTCGAAACGTTCCTGT+TGG - Chr7:17347218-17347237 MsG0780036970.01.T01:CDS 50.0%
GCTCGATCGGTCATTGATAC+TGG + Chr7:17347041-17347060 None:intergenic 50.0%
GTAGCTGCCATCAGCTTCAA+CGG + Chr7:17347003-17347022 None:intergenic 50.0%
TCTGTCACCGTTGAAGCTGA+TGG - Chr7:17346993-17347012 MsG0780036970.01.T01:CDS 50.0%
! CGTCGTTATTGGACTAGAGG+TGG - Chr7:17347194-17347213 MsG0780036970.01.T01:CDS 50.0%
! GATAGCGGTTGCAAAGCTGA+TGG + Chr7:17346960-17346979 None:intergenic 50.0%
!! TGGTGGTTCTAGCTCAGCAA+GGG - Chr7:17347346-17347365 MsG0780036970.01.T01:CDS 50.0%
ACCTGTTGTGTCCAGTTGGG+TGG + Chr7:17346584-17346603 None:intergenic 55.0%
CGAAACGTTCCTGTTGGAGG+TGG - Chr7:17347224-17347243 MsG0780036970.01.T01:CDS 55.0%
GAAGCTGATGGCAGCTACCA+AGG - Chr7:17347005-17347024 MsG0780036970.01.T01:CDS 55.0%
TCCACCCAACTGGACACAAC+AGG - Chr7:17346580-17346599 MsG0780036970.01.T01:CDS 55.0%
! GTGCTGCTGCAGCATCATTC+TGG + Chr7:17347082-17347101 None:intergenic 55.0%
!! CTGGTGGTTCTAGCTCAGCA+AGG - Chr7:17347345-17347364 MsG0780036970.01.T01:CDS 55.0%
GATCATCTCCAGGTCGGTGC+CGG - Chr7:17347317-17347336 MsG0780036970.01.T01:CDS 60.0%
GCTAGAACCACCAGCAGCAC+CGG + Chr7:17347339-17347358 None:intergenic 60.0%
!! CAGCAGCACCGGCACCGACC+TGG + Chr7:17347328-17347347 None:intergenic 75.0%
!! CAGGTCGGTGCCGGTGCTGC+TGG - Chr7:17347326-17347345 MsG0780036970.01.T01:CDS 75.0%
!! GTCGGTGCCGGTGCTGCTGG+TGG - Chr7:17347329-17347348 MsG0780036970.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 17346548 17347994 17346548 ID=MsG0780036970.01;Name=MsG0780036970.01
Chr7 mRNA 17346548 17347994 17346548 ID=MsG0780036970.01.T01;Parent=MsG0780036970.01;Name=MsG0780036970.01.T01;_AED=0.24;_eAED=0.24;_QI=0|0|0|1|0|0.5|2|0|373
Chr7 exon 17346548 17347615 17346548 ID=MsG0780036970.01.T01:exon:3208;Parent=MsG0780036970.01.T01
Chr7 exon 17347941 17347994 17347941 ID=MsG0780036970.01.T01:exon:3207;Parent=MsG0780036970.01.T01
Chr7 CDS 17347941 17347994 17347941 ID=MsG0780036970.01.T01:cds;Parent=MsG0780036970.01.T01
Chr7 CDS 17346548 17347615 17346548 ID=MsG0780036970.01.T01:cds;Parent=MsG0780036970.01.T01
Chr7 mRNA 17346548 17347552 17346548 ID=MsG0780036970.01.T02;Parent=MsG0780036970.01;Name=MsG0780036970.01.T02;_AED=0.27;_eAED=0.27;_QI=0|0|0|1|0|0|2|0|322
Chr7 exon 17346548 17347194 17346548 ID=MsG0780036970.01.T02:exon:3210;Parent=MsG0780036970.01.T02
Chr7 exon 17347231 17347552 17347231 ID=MsG0780036970.01.T02:exon:3209;Parent=MsG0780036970.01.T02
Chr7 CDS 17347231 17347552 17347231 ID=MsG0780036970.01.T02:cds;Parent=MsG0780036970.01.T02
Chr7 CDS 17346548 17347194 17346548 ID=MsG0780036970.01.T02:cds;Parent=MsG0780036970.01.T02
Chr7 mRNA 17346548 17347552 17346548 ID=MsG0780036970.01.T03;Parent=MsG0780036970.01;Name=MsG0780036970.01.T03;_AED=0.27;_eAED=0.28;_QI=0|0|0|1|0|0|2|0|319
Chr7 exon 17346548 17347179 17346548 ID=MsG0780036970.01.T03:exon:3212;Parent=MsG0780036970.01.T03
Chr7 exon 17347225 17347552 17347225 ID=MsG0780036970.01.T03:exon:3211;Parent=MsG0780036970.01.T03
Chr7 CDS 17347225 17347552 17347225 ID=MsG0780036970.01.T03:cds;Parent=MsG0780036970.01.T03
Chr7 CDS 17346548 17347179 17346548 ID=MsG0780036970.01.T03:cds;Parent=MsG0780036970.01.T03
Gene Sequence

>MsG0780036970.01.T02

ATGTCTGTCACCGTTGAAGCTGATGGCAGCTACCAAGGGTCTAGAAGACCAGTATCAATGACCGATCGAGCTAAGATGTCAAAGATACACCAGAATGATGCTGCAGCAGCACAGAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGTTACTACAACAACTACAATCTTTCACAACCACGCCATTTTTGCAAAACTTGTCGTCGTTATTGGACTAGAGGTGGTGCACTTCGAAACGTTCCTGTTGGAGGTGGTTGTAGAAGGAACAACAAAAGAAGAAAAAGTAATTCAGCATCAAAATCACCTCTGAAACCTAATCGTGGTTCTAGCTCAGCAAGGGCAAATTCTTCTTCTAATAATGGTTGCACTAATTCTAATGTGAATGTTGGAATGCCTCATTTTCCAACACAATTTCCATTTGTAACCTCTTTAGATCGTCATAGCGACAATAGTTATGTTTCTGAGGGCATTGGTTCTTTGTTGGCCAAAAATATGAGCAATAGTACTACAACTAATGTTGAGTTTCAACTTGGTAGTGGTTCTTCAATTGGTAATGGTAATGGTGGCTCTTTGTTGATACCAAATGGCATTGGTGAACAATGGAGGTTTCCGAATTCGCTACAAGTTCATCAACAACAATATCAGCAATTCCCTTTCTTGAGTAATTTGCAACCACAAATTGGATTATTTCAATTTGGTGGAGAAAATAATGGTGAACCACAAAGAAATTTGTTTCGTTCTAAGGAAACATATTCTTCAAGTGTTAGTATTGGAATGATGCCTCAAGTTAATACAGTTAAAGTGGAAGAAAACAATCATCAAGGTTTGAGTTTGCCAAAAAATCTCTTGAATGGTTCAGGAAATAGTAATGATCTATTTTGGAATGGAAATGGAGGAAGTGGTAATGAAAATGCATGGAATGAAGTTCCTAGTTTCAATTCACCACCTTGTGATCCTCAAATCTAG

>MsG0780036970.01.T03

ATGTCTGTCACCGTTGAAGCTGATGGCAGCTACCAAGGGTCTAGAAGACCAGTATCAATGACCGATCGAGCTAAGATGTCAAAGATACACCAGAATGATGCTGCAGCAGCACAGAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGTTACTACAACAACTACAATCTTTCACAACCACGCCATTTTTGCAAAACTTGTCGTCGTTATTGGACTAGAGGTGGTGCACTTCGAAACGTTCCTGTTGGAGGTGGTTGTAGAAGGAACAACAAAAGAAGAAAAAGTAATTCAGCATCAAAATCACCTCTGAAACCTAATCATAACGCAAGGGCAAATTCTTCTTCTAATAATGGTTGCACTAATTCTAATGTGAATGTTGGAATGCCTCATTTTCCAACACAATTTCCATTTGTAACCTCTTTAGATCGTCATAGCGACAATAGTTATGTTTCTGAGGGCATTGGTTCTTTGTTGGCCAAAAATATGAGCAATAGTACTACAACTAATGTTGAGTTTCAACTTGGTAGTGGTTCTTCAATTGGTAATGGTAATGGTGGCTCTTTGTTGATACCAAATGGCATTGGTGAACAATGGAGGTTTCCGAATTCGCTACAAGTTCATCAACAACAATATCAGCAATTCCCTTTCTTGAGTAATTTGCAACCACAAATTGGATTATTTCAATTTGGTGGAGAAAATAATGGTGAACCACAAAGAAATTTGTTTCGTTCTAAGGAAACATATTCTTCAAGTGTTAGTATTGGAATGATGCCTCAAGTTAATACAGTTAAAGTGGAAGAAAACAATCATCAAGGTTTGAGTTTGCCAAAAAATCTCTTGAATGGTTCAGGAAATAGTAATGATCTATTTTGGAATGGAAATGGAGGAAGTGGTAATGAAAATGCATGGAATGAAGTTCCTAGTTTCAATTCACCACCTTGTGATCCTCAAATCTAG

>MsG0780036970.01.T01

ATGGTCTTCCCCTCCCTCCCAATCTATCTAGATCCACCCAACTGGACACAACAGCAAGTAGGAATTGGTATTGGCGATCAAAATCCATCAGCTTTGCAACCGCTATCAGCTTCAACGATGTCTGTCACCGTTGAAGCTGATGGCAGCTACCAAGGGTCTAGAAGACCAGTATCAATGACCGATCGAGCTAAGATGTCAAAGATACACCAGAATGATGCTGCAGCAGCACAGAAATGTCCAAGATGTGAATCAACAAACACAAAGTTCTGTTACTACAACAACTACAATCTTTCACAACCACGCCATTTTTGCAAAACTTGTCGTCGTTATTGGACTAGAGGTGGTGCACTTCGAAACGTTCCTGTTGGAGGTGGTTGTAGAAGGAACAACAAAAGAAGAAAAAGTAATTCAGCATCAAAATCACCTCTGAAACCTAATCATAACGATCATCTCCAGGTCGGTGCCGGTGCTGCTGGTGGTTCTAGCTCAGCAAGGGCAAATTCTTCTTCTAATAATGGTTGCACTAATTCTAATGTGAATGTTGGAATGCCTCATTTTCCAACACAATTTCCATTTGTAACCTCTTTAGATCGTCATAGCGACAATAGTTATGTTTCTGAGGGCATTGGTTCTTTGTTGGCCAAAAATATGAGCAATAGTACTACAACTAATGTTGAGTTTCAACTTGGTAGTGGTTCTTCAATTGGTAATGGTAATGGTGGCTCTTTGTTGATACCAAATGGCATTGGTGAACAATGGAGGTTTCCGAATTCGCTACAAGTTCATCAACAACAATATCAGCAATTCCCTTTCTTGAGTAATTTGCAACCACAAATTGGATTATTTCAATTTGGTGGAGAAAATAATGGTGAACCACAAAGAAATTTGTTTCGTTCTAAGGAAACATATTCTTCAAGTGTTAGTATTGGAATGATGCCTCAAGTTAATACAGTTAAAGTGGAAGAAAACAATCATCAAGGTTTGAGTTTGCCAAAAAATCTCTTGAATGGTTCAGGAAATAGTAATGATCTATTTTGGAATGGAAATGGAGGAAGTGGTAATGAAAATGCATGGAATGAAGTTCCTAGTTTCAATTCACCACCTTGTGATCCTCAAATCTAG
Protein sequence

>MsG0780036970.01.T02

MSVTVEADGSYQGSRRPVSMTDRAKMSKIHQNDAAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRRKSNSASKSPLKPNRGSSSARANSSSNNGCTNSNVNVGMPHFPTQFPFVTSLDRHSDNSYVSEGIGSLLAKNMSNSTTTNVEFQLGSGSSIGNGNGGSLLIPNGIGEQWRFPNSLQVHQQQYQQFPFLSNLQPQIGLFQFGGENNGEPQRNLFRSKETYSSSVSIGMMPQVNTVKVEENNHQGLSLPKNLLNGSGNSNDLFWNGNGGSGNENAWNEVPSFNSPPCDPQI*

>MsG0780036970.01.T03

MSVTVEADGSYQGSRRPVSMTDRAKMSKIHQNDAAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRRKSNSASKSPLKPNHNARANSSSNNGCTNSNVNVGMPHFPTQFPFVTSLDRHSDNSYVSEGIGSLLAKNMSNSTTTNVEFQLGSGSSIGNGNGGSLLIPNGIGEQWRFPNSLQVHQQQYQQFPFLSNLQPQIGLFQFGGENNGEPQRNLFRSKETYSSSVSIGMMPQVNTVKVEENNHQGLSLPKNLLNGSGNSNDLFWNGNGGSGNENAWNEVPSFNSPPCDPQI*

>MsG0780036970.01.T01

MVFPSLPIYLDPPNWTQQQVGIGIGDQNPSALQPLSASTMSVTVEADGSYQGSRRPVSMTDRAKMSKIHQNDAAAAQKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNNKRRKSNSASKSPLKPNHNDHLQVGAGAAGGSSSARANSSSNNGCTNSNVNVGMPHFPTQFPFVTSLDRHSDNSYVSEGIGSLLAKNMSNSTTTNVEFQLGSGSSIGNGNGGSLLIPNGIGEQWRFPNSLQVHQQQYQQFPFLSNLQPQIGLFQFGGENNGEPQRNLFRSKETYSSSVSIGMMPQVNTVKVEENNHQGLSLPKNLLNGSGNSNDLFWNGNGGSGNENAWNEVPSFNSPPCDPQI*