AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037233.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037233.01.T01 MTR_7g029020 96.296 135 5 0 25 159 168 302 1.79e-91 268
MsG0780037233.01.T01 MTR_3g056025 89.147 129 14 0 25 153 168 296 5.51e-81 241
MsG0780037233.01.T01 MTR_3g056010 88.372 129 15 0 25 153 168 296 6.63e-80 238
MsG0780037233.01.T01 MTR_3g099940 87.692 130 13 1 25 154 169 295 1.57e-77 232
MsG0780037233.01.T01 MTR_5g094390 83.193 119 20 0 23 141 167 285 3.71e-70 214
MsG0780037233.01.T01 MTR_5g097530 75.397 126 31 0 23 148 163 288 6.89e-68 208
MsG0780037233.01.T01 MTR_0283s0050 75.962 104 25 0 23 126 163 266 5.41e-56 177
MsG0780037233.01.T01 MTR_7g114680 66.942 121 39 1 25 145 152 271 1.00e-47 164
MsG0780037233.01.T01 MTR_7g114680 66.942 121 39 1 25 145 166 285 1.10e-47 164
MsG0780037233.01.T01 MTR_1g081330 64.463 121 42 1 25 145 81 200 5.54e-46 159
MsG0780037233.01.T01 MTR_3g095680 58.824 136 51 2 12 143 14 148 6.28e-46 157
MsG0780037233.01.T01 MTR_1g081330 64.463 121 42 1 25 145 166 285 8.23e-46 159
MsG0780037233.01.T01 MTR_7g072860 61.538 117 45 0 25 141 170 286 2.78e-45 156
MsG0780037233.01.T01 MTR_7g072640 61.538 117 45 0 25 141 170 286 2.78e-45 156
MsG0780037233.01.T01 MTR_3g095680 63.025 119 43 1 25 143 175 292 5.65e-45 156
MsG0780037233.01.T01 MTR_3g095680 63.025 119 43 1 25 143 207 324 1.01e-44 155
MsG0780037233.01.T01 MTR_1g103850 64.000 125 43 2 25 149 166 288 1.51e-44 155
MsG0780037233.01.T01 MTR_8g093090 58.400 125 51 1 25 149 31 154 1.82e-44 152
MsG0780037233.01.T01 MTR_8g093090 58.400 125 51 1 25 149 93 216 4.54e-44 152
MsG0780037233.01.T01 MTR_8g093090 58.400 125 51 1 25 149 175 298 1.57e-43 152
MsG0780037233.01.T01 MTR_8g093090 58.400 125 51 1 25 149 193 316 1.64e-43 152
MsG0780037233.01.T01 MTR_5g075220 57.724 123 52 0 23 145 167 289 4.14e-43 150
MsG0780037233.01.T01 MTR_8g027265 65.546 119 40 1 25 143 180 297 6.28e-40 142
MsG0780037233.01.T01 MTR_3g076650 62.992 127 44 1 25 151 168 291 1.36e-39 140
MsG0780037233.01.T01 MTR_3g080960 64.103 117 41 1 25 141 162 277 2.17e-38 137
MsG0780037233.01.T01 MTR_6g016260 60.504 119 47 0 23 141 146 264 7.06e-38 135
MsG0780037233.01.T01 MTR_4g028830 58.400 125 52 0 23 147 164 288 1.10e-36 133
MsG0780037233.01.T01 MTR_3g056013 76.000 75 18 0 79 153 6 80 1.32e-35 119
MsG0780037233.01.T01 MTR_3g096230 36.975 119 71 3 25 140 382 499 7.36e-17 77.0
MsG0780037233.01.T01 MTR_3g096230 36.975 119 71 3 25 140 382 499 8.14e-17 77.0
MsG0780037233.01.T01 MTR_1g100250 39.496 119 66 4 26 140 550 666 1.62e-16 76.3
MsG0780037233.01.T01 MTR_3g062420 42.353 85 34 1 23 92 1977 2061 6.25e-15 71.6
MsG0780037233.01.T01 MTR_8g093730 36.066 122 68 4 25 140 437 554 1.11e-14 70.9
MsG0780037233.01.T01 MTR_8g098425 35.294 119 73 3 25 140 546 663 1.45e-14 70.5
MsG0780037233.01.T01 MTR_5g023150 28.058 139 93 4 5 137 405 542 1.52e-12 64.7
MsG0780037233.01.T01 MTR_5g045190 31.690 142 89 6 8 142 354 494 1.66e-12 64.7
MsG0780037233.01.T01 MTR_5g023150 28.058 139 93 4 5 137 308 445 1.66e-12 64.3
MsG0780037233.01.T01 MTR_4g094415 35.000 120 71 5 26 141 301 417 2.28e-12 63.9
MsG0780037233.01.T01 MTR_2g040510 31.126 151 82 6 21 154 201 346 4.90e-12 62.8
MsG0780037233.01.T01 MTR_5g059880 34.454 119 71 5 26 140 329 444 5.38e-12 62.8
MsG0780037233.01.T01 MTR_4g080030 34.513 113 68 3 26 136 684 792 5.59e-12 63.2
MsG0780037233.01.T01 MTR_7g095450 32.836 134 83 4 14 142 128 259 1.18e-11 62.0
MsG0780037233.01.T01 MTR_4g051648 32.847 137 85 4 10 141 128 262 1.34e-11 62.0
MsG0780037233.01.T01 MTR_1g090020 38.938 113 64 3 27 135 1048 1159 1.60e-11 61.6
MsG0780037233.01.T01 MTR_1g071480 33.588 131 80 4 14 139 128 256 2.27e-11 61.2
MsG0780037233.01.T01 MTR_8g442400 36.283 113 67 3 27 135 1534 1645 2.36e-11 61.2
MsG0780037233.01.T01 MTR_1g061190 38.393 112 59 5 26 131 694 801 2.74e-11 60.8
MsG0780037233.01.T01 MTR_1g081790 36.585 123 70 5 16 135 820 937 3.44e-11 60.8
MsG0780037233.01.T01 MTR_3g073250 36.066 122 67 5 26 141 407 523 9.94e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037233.01.T01 AT5G55560 80.833 120 23 0 23 142 171 290 1.44e-68 210
MsG0780037233.01.T01 AT3G48260 62.393 117 44 0 25 141 69 185 1.26e-47 159
MsG0780037233.01.T01 AT3G48260 62.393 117 44 0 25 141 164 280 8.00e-47 159
MsG0780037233.01.T01 AT3G04910 63.158 133 44 2 25 157 40 167 1.34e-46 159
MsG0780037233.01.T01 AT1G49160 64.706 119 41 1 25 143 43 160 1.72e-46 157
MsG0780037233.01.T01 AT1G49160 64.706 119 41 1 25 143 43 160 1.72e-46 157
MsG0780037233.01.T01 AT1G49160 64.706 119 41 1 25 143 43 160 1.72e-46 157
MsG0780037233.01.T01 AT3G04910 63.158 133 44 2 25 157 143 270 2.06e-46 160
MsG0780037233.01.T01 AT3G04910 63.158 133 44 2 25 157 166 293 2.65e-46 160
MsG0780037233.01.T01 AT3G18750 63.866 119 42 1 25 143 152 269 4.79e-46 157
MsG0780037233.01.T01 AT3G18750 63.866 119 42 1 25 143 170 287 9.02e-46 157
MsG0780037233.01.T01 AT3G18750 63.866 119 42 1 25 143 170 287 9.02e-46 157
MsG0780037233.01.T01 AT3G18750 63.866 119 42 1 25 143 170 287 9.02e-46 157
MsG0780037233.01.T01 AT1G49160 64.706 119 41 1 25 143 152 269 9.22e-46 157
MsG0780037233.01.T01 AT1G49160 64.706 119 41 1 25 143 217 334 1.34e-45 155
MsG0780037233.01.T01 AT1G49160 64.706 119 41 1 25 143 170 287 1.90e-45 156
MsG0780037233.01.T01 AT1G49160 64.706 119 41 1 25 143 217 334 3.53e-45 156
MsG0780037233.01.T01 AT5G58350 57.983 119 50 0 23 141 159 277 1.79e-44 154
MsG0780037233.01.T01 AT5G28080 60.163 123 48 1 25 147 81 202 8.37e-44 149
MsG0780037233.01.T01 AT5G28080 60.163 123 48 1 25 147 81 202 8.37e-44 149
MsG0780037233.01.T01 AT5G28080 60.163 123 48 1 25 147 81 202 8.37e-44 149
MsG0780037233.01.T01 AT5G28080 60.163 123 48 1 25 147 81 202 8.37e-44 149
MsG0780037233.01.T01 AT5G28080 60.163 123 48 1 25 147 81 202 8.37e-44 149
MsG0780037233.01.T01 AT5G28080 60.163 123 48 1 25 147 130 251 2.09e-43 149
MsG0780037233.01.T01 AT5G28080 60.163 123 48 1 25 147 167 288 3.45e-43 149
MsG0780037233.01.T01 AT3G51630 58.537 123 51 0 23 145 165 287 8.11e-43 149
MsG0780037233.01.T01 AT3G51630 58.537 123 51 0 23 145 165 287 8.11e-43 149
MsG0780037233.01.T01 AT3G22420 59.829 117 46 1 25 141 166 281 4.63e-42 147
MsG0780037233.01.T01 AT3G22420 59.829 117 46 1 25 141 166 281 4.72e-42 147
MsG0780037233.01.T01 AT3G22420 59.829 117 46 1 25 141 237 352 5.22e-42 148
MsG0780037233.01.T01 AT3G22420 59.829 117 46 1 25 141 237 352 5.26e-42 148
MsG0780037233.01.T01 AT5G41990 64.103 117 41 1 25 141 171 286 2.64e-39 140
MsG0780037233.01.T01 AT1G64630 63.025 119 43 1 25 143 158 275 1.63e-38 137
MsG0780037233.01.T01 AT3G22420 47.297 148 47 1 25 141 166 313 1.84e-37 135
MsG0780037233.01.T01 AT3G22420 47.297 148 47 1 25 141 166 313 1.95e-37 135
MsG0780037233.01.T01 AT5G28080 57.895 95 40 0 53 147 1 95 6.73e-31 113
MsG0780037233.01.T01 AT1G53570 37.500 120 71 3 25 141 352 470 6.83e-18 80.1
MsG0780037233.01.T01 AT1G53570 37.500 120 71 3 25 141 352 470 6.83e-18 80.1
MsG0780037233.01.T01 AT1G53570 37.500 120 71 3 25 141 352 470 7.11e-18 80.1
MsG0780037233.01.T01 AT1G53570 37.500 120 71 3 25 141 352 470 7.11e-18 80.1
MsG0780037233.01.T01 AT1G53570 37.500 120 71 3 25 141 352 470 7.11e-18 80.1
MsG0780037233.01.T01 AT1G53570 37.500 120 71 3 25 141 352 470 7.11e-18 80.1
MsG0780037233.01.T01 AT1G53570 35.833 120 66 4 32 141 326 444 1.03e-14 70.9
MsG0780037233.01.T01 AT3G46920 37.069 116 68 3 27 138 1020 1134 1.88e-13 67.4
MsG0780037233.01.T01 AT2G31010 34.677 124 71 4 26 147 656 771 2.79e-13 67.0
MsG0780037233.01.T01 AT2G31010 34.677 124 71 4 26 147 656 771 2.79e-13 67.0
MsG0780037233.01.T01 AT3G20860 34.328 134 81 4 14 142 127 258 4.02e-13 66.2
MsG0780037233.01.T01 AT3G46920 37.069 116 68 3 27 138 954 1068 5.33e-13 66.2
MsG0780037233.01.T01 AT1G63700 33.898 118 74 3 26 140 539 655 1.21e-12 65.1
MsG0780037233.01.T01 AT1G63700 33.898 118 74 3 26 140 539 655 1.21e-12 65.1
MsG0780037233.01.T01 AT1G54960 36.800 125 64 6 26 140 210 329 1.33e-12 64.7
MsG0780037233.01.T01 AT1G54960 36.800 125 64 6 26 140 210 329 1.33e-12 64.7
MsG0780037233.01.T01 AT4G08480 36.667 120 68 5 26 140 638 754 1.79e-12 64.3
MsG0780037233.01.T01 AT4G26890 37.500 120 67 5 26 142 140 254 3.21e-12 63.5
MsG0780037233.01.T01 AT1G09000 36.000 125 65 6 26 140 211 330 4.34e-12 63.2
MsG0780037233.01.T01 AT1G09000 36.000 125 65 6 26 140 211 330 6.45e-12 62.8
MsG0780037233.01.T01 AT2G24360 33.333 114 73 3 26 137 270 382 7.42e-12 62.4
MsG0780037233.01.T01 AT2G42640 36.283 113 66 3 26 136 662 770 1.12e-11 62.4
MsG0780037233.01.T01 AT2G42640 36.283 113 66 3 26 136 624 732 1.14e-11 62.0
MsG0780037233.01.T01 AT5G28290 32.143 140 88 4 8 142 122 259 1.32e-11 62.0
MsG0780037233.01.T01 AT5G55090 35.433 127 77 5 26 149 140 264 1.44e-11 61.6
MsG0780037233.01.T01 AT5G28290 32.143 140 88 4 8 142 122 259 1.51e-11 61.6
MsG0780037233.01.T01 AT5G28290 32.143 140 88 4 8 142 122 259 1.51e-11 61.6
MsG0780037233.01.T01 AT3G63280 30.435 138 85 5 12 142 180 313 1.66e-11 61.6
MsG0780037233.01.T01 AT1G54510 33.333 141 81 6 14 145 128 264 1.88e-11 61.6
MsG0780037233.01.T01 AT1G54510 33.333 141 81 6 14 145 128 264 1.88e-11 61.6
MsG0780037233.01.T01 AT1G54510 33.333 141 81 6 14 145 128 264 1.88e-11 61.6
MsG0780037233.01.T01 AT1G54510 33.333 141 81 6 14 145 128 264 1.88e-11 61.6
MsG0780037233.01.T01 AT4G29810 32.090 134 82 4 21 145 201 334 2.00e-11 61.2
MsG0780037233.01.T01 AT4G29810 32.090 134 82 4 21 145 210 343 2.02e-11 61.2
MsG0780037233.01.T01 AT5G55090 35.433 127 77 5 26 149 202 326 2.05e-11 61.2
MsG0780037233.01.T01 AT3G63280 30.435 138 85 5 12 142 126 259 2.71e-11 60.8
MsG0780037233.01.T01 AT3G63280 30.435 138 85 5 12 142 126 259 2.71e-11 60.8
MsG0780037233.01.T01 AT3G63280 30.435 138 85 5 12 142 126 259 2.71e-11 60.8
MsG0780037233.01.T01 AT4G31170 32.743 113 73 3 26 136 271 382 2.91e-11 60.8
MsG0780037233.01.T01 AT4G31170 32.743 113 73 3 26 136 271 382 2.91e-11 60.8
MsG0780037233.01.T01 AT4G31170 32.743 113 73 3 26 136 271 382 2.91e-11 60.8
MsG0780037233.01.T01 AT4G31170 32.743 113 73 3 26 136 271 382 2.91e-11 60.8
MsG0780037233.01.T01 AT4G31170 32.743 113 73 3 26 136 271 382 2.91e-11 60.8
MsG0780037233.01.T01 AT4G31170 32.743 113 73 3 26 136 271 382 2.91e-11 60.8
MsG0780037233.01.T01 AT4G31170 32.743 113 73 3 26 136 271 382 2.91e-11 60.8
MsG0780037233.01.T01 AT3G44200 32.847 137 85 4 10 141 128 262 3.37e-11 60.8
MsG0780037233.01.T01 AT3G44200 32.847 137 85 4 10 141 128 262 3.37e-11 60.8
MsG0780037233.01.T01 AT4G12020 34.921 126 65 6 26 143 1755 1871 3.55e-11 60.8
MsG0780037233.01.T01 AT4G12020 34.921 126 65 6 26 143 1763 1879 3.62e-11 60.8
MsG0780037233.01.T01 AT4G12020 34.921 126 65 6 26 143 1688 1804 3.72e-11 60.8
MsG0780037233.01.T01 AT4G08470 35.833 120 69 5 26 140 358 474 3.95e-11 60.5
MsG0780037233.01.T01 AT3G04810 32.090 134 84 4 14 142 128 259 4.63e-11 60.5
MsG0780037233.01.T01 AT3G04810 32.090 134 84 4 14 142 128 259 4.63e-11 60.5
MsG0780037233.01.T01 AT3G04810 32.090 134 84 4 14 142 128 259 4.63e-11 60.5
MsG0780037233.01.T01 AT4G08470 35.833 120 69 5 26 140 440 556 5.01e-11 60.1
MsG0780037233.01.T01 AT4G26070 32.374 139 84 5 21 149 186 324 5.82e-11 59.7
MsG0780037233.01.T01 AT4G26070 32.374 139 84 5 21 149 198 336 6.22e-11 59.7
MsG0780037233.01.T01 AT2G17700 30.702 114 76 3 26 137 421 533 6.34e-11 60.1
MsG0780037233.01.T01 AT1G12680 26.613 124 79 3 25 141 237 355 7.71e-11 59.7
MsG0780037233.01.T01 AT4G26070 32.374 139 84 5 21 149 199 337 7.78e-11 59.7
MsG0780037233.01.T01 AT4G26070 32.374 139 84 5 21 149 199 337 7.78e-11 59.7

Find 28 sgRNAs with CRISPR-Local

Find 59 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTAGGGACACCGGAATTTA+TGG 0.213603 7:-22214126 MsG0780037233.01.T01:CDS
TCATTGCACTTTACAATGTT+TGG 0.285058 7:-22214848 MsG0780037233.01.T01:CDS
ACACTATCACATTCGCTATA+AGG 0.331807 7:+22214014 None:intergenic
AACATCTTTAATCTTGTTCA+AGG 0.377153 7:+22213947 None:intergenic
ATGGTTGACATATACTCATT+TGG 0.379788 7:-22214071 MsG0780037233.01.T01:CDS
GTGTTAGATTGTGATGAAAA+TGG 0.393294 7:-22213837 MsG0780037233.01.T01:CDS
TGTTGCGAAGATATACAAAA+AGG 0.416402 7:-22213994 MsG0780037233.01.T01:CDS
TTAATCTTGTTCAAGGATTG+AGG 0.430019 7:+22213954 None:intergenic
TAAGATCGGTGACTTAGGTT+TGG 0.433479 7:-22214186 MsG0780037233.01.T01:CDS
AACTCTGGTGCCATAAATTC+CGG 0.440730 7:+22214116 None:intergenic
TAGGTTAAGATCGGTGACTT+AGG 0.458220 7:-22214191 MsG0780037233.01.T01:CDS
CATGAAAATTAGGTTAAGAT+CGG 0.487578 7:-22214200 MsG0780037233.01.T01:intron
CTTAGGTTTGGCAACGATCG+TGG 0.516409 7:-22214174 MsG0780037233.01.T01:CDS
AAGTGAAGGCTTTCATTGAA+AGG 0.518607 7:-22213923 MsG0780037233.01.T01:CDS
TGGTGATGTTGATGATGAAT+CGG 0.520961 7:-22213817 MsG0780037233.01.T01:CDS
GATTAAAGATGTTGAAGTGA+AGG 0.533901 7:-22213937 MsG0780037233.01.T01:CDS
TCAGCAGAAGGTCTAGCCCT+TGG 0.534856 7:+22213888 None:intergenic
TTGCACTTTACAATGTTTGG+AGG 0.543593 7:-22214845 MsG0780037233.01.T01:CDS
TGCACTTTACAATGTTTGGA+GGG 0.546438 7:-22214844 MsG0780037233.01.T01:CDS
TAATTCTCTTCGTATAACTC+TGG 0.549363 7:+22214101 None:intergenic
TTTAGCAATTCATCAGCAGA+AGG 0.563708 7:+22213876 None:intergenic
AAAGGTGTCTTGCTCAACCA+AGG 0.573668 7:-22213905 MsG0780037233.01.T01:CDS
CGAAGAGAATTACACTGAGA+TGG 0.579495 7:-22214090 MsG0780037233.01.T01:CDS
TGGAATGTTAGTACTAGAGA+TGG 0.585466 7:-22214051 MsG0780037233.01.T01:CDS
TTAGGTTTGGCAACGATCGT+GGG 0.589389 7:-22214173 MsG0780037233.01.T01:CDS
GGAGGGATGTGATCAATACA+TGG 0.634616 7:-22214827 MsG0780037233.01.T01:CDS
TACATGGAATTTCATCACTG+AGG 0.666345 7:-22214811 MsG0780037233.01.T01:intron
AAGGTGTCTTGCTCAACCAA+GGG 0.669830 7:-22213904 MsG0780037233.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACTAATTTCAAAATAAAAA+AGG + Chr7:22214084-22214103 None:intergenic 10.0%
!!! TTTTTATTTTCATGAAAATT+AGG - Chr7:22214460-22214479 MsG0780037233.01.T01:intron 10.0%
!! ATAAAAAAGAACATTACTAA+TGG + Chr7:22214447-22214466 None:intergenic 15.0%
!! GTTGAATAATTATATTTGAA+AGG + Chr7:22214343-22214362 None:intergenic 15.0%
!! ATAATTATTCAACTTAGAAG+AGG - Chr7:22214350-22214369 MsG0780037233.01.T01:intron 20.0%
!! GTTATTTGAATTCATTTCTA+TGG - Chr7:22214145-22214164 MsG0780037233.01.T01:CDS 20.0%
! AACATCTTTAATCTTGTTCA+AGG + Chr7:22214726-22214745 None:intergenic 25.0%
! CAATCTAACACATCAAAAAA+AGG + Chr7:22214824-22214843 None:intergenic 25.0%
! CATGAAAATTAGGTTAAGAT+CGG - Chr7:22214470-22214489 MsG0780037233.01.T01:intron 25.0%
!! CATAGTTAGTTTATTCACAA+GGG - Chr7:22214299-22214318 MsG0780037233.01.T01:intron 25.0%
!! TATGGTTCATTATCTCATTT+TGG - Chr7:22214163-22214182 MsG0780037233.01.T01:CDS 25.0%
AGATCTCTATGAATGATACA+AGG + Chr7:22214005-22214024 None:intergenic 30.0%
ATAACATAACATTCCTAGCT+CGG + Chr7:22214130-22214149 None:intergenic 30.0%
ATGGTTGACATATACTCATT+TGG - Chr7:22214599-22214618 MsG0780037233.01.T01:intron 30.0%
GATTAAAGATGTTGAAGTGA+AGG - Chr7:22214733-22214752 MsG0780037233.01.T01:intron 30.0%
GTGTTAGATTGTGATGAAAA+TGG - Chr7:22214833-22214852 MsG0780037233.01.T01:CDS 30.0%
GTTAATTAACTCGACTGTTA+CGG + Chr7:22214191-22214210 None:intergenic 30.0%
TAATTCTCTTCGTATAACTC+TGG + Chr7:22214572-22214591 None:intergenic 30.0%
TCATTGCACTTTACAATGTT+TGG - Chr7:22213822-22213841 MsG0780037233.01.T01:CDS 30.0%
TGGTATCTTGTCATAAACAA+TGG + Chr7:22214427-22214446 None:intergenic 30.0%
TGTTGCGAAGATATACAAAA+AGG - Chr7:22214676-22214695 MsG0780037233.01.T01:intron 30.0%
TTAATCTTGTTCAAGGATTG+AGG + Chr7:22214719-22214738 None:intergenic 30.0%
TTGTACAATTGGGAATTTGA+GGG - Chr7:22213883-22213902 MsG0780037233.01.T01:CDS 30.0%
TTTGTACAATTGGGAATTTG+AGG - Chr7:22213882-22213901 MsG0780037233.01.T01:CDS 30.0%
! ATTCAGCACATTCAGTTTTA+GGG - Chr7:22214528-22214547 MsG0780037233.01.T01:intron 30.0%
! GCATAGTTAGTTTATTCACA+AGG - Chr7:22214298-22214317 MsG0780037233.01.T01:intron 30.0%
!! ATATACAAAAAGGTGTCTTC+AGG - Chr7:22214686-22214705 MsG0780037233.01.T01:intron 30.0%
!! TGCAGTAATGTTTTTGTCAA+CGG - Chr7:22214029-22214048 MsG0780037233.01.T01:CDS 30.0%
AAGTGAAGGCTTTCATTGAA+AGG - Chr7:22214747-22214766 MsG0780037233.01.T01:intron 35.0%
ACACTATCACATTCGCTATA+AGG + Chr7:22214659-22214678 None:intergenic 35.0%
ATCACTGAGGTTTGTACAAT+TGG - Chr7:22213872-22213891 MsG0780037233.01.T01:CDS 35.0%
TAACATAACATTCCTAGCTC+GGG + Chr7:22214129-22214148 None:intergenic 35.0%
TACATGGAATTTCATCACTG+AGG - Chr7:22213859-22213878 MsG0780037233.01.T01:CDS 35.0%
TCAAAGCTTGAAGAGAAAAC+AGG + Chr7:22213926-22213945 None:intergenic 35.0%
TCACTGAGGTTTGTACAATT+GGG - Chr7:22213873-22213892 MsG0780037233.01.T01:CDS 35.0%
TGCACTTTACAATGTTTGGA+GGG - Chr7:22213826-22213845 MsG0780037233.01.T01:CDS 35.0%
TGGAATGTTAGTACTAGAGA+TGG - Chr7:22214619-22214638 MsG0780037233.01.T01:intron 35.0%
TTGCACTTTACAATGTTTGG+AGG - Chr7:22213825-22213844 MsG0780037233.01.T01:CDS 35.0%
TTTAGCAATTCATCAGCAGA+AGG + Chr7:22214797-22214816 None:intergenic 35.0%
! CATTCAGCACATTCAGTTTT+AGG - Chr7:22214527-22214546 MsG0780037233.01.T01:intron 35.0%
! GTTTTTGTCAACGGAAATAC+TGG - Chr7:22214038-22214057 MsG0780037233.01.T01:CDS 35.0%
! TGGTCTAAGCAGATTTTGAA+AGG - Chr7:22213954-22213973 MsG0780037233.01.T01:CDS 35.0%
!! GGTCTAAGCAGATTTTGAAA+GGG - Chr7:22213955-22213974 MsG0780037233.01.T01:CDS 35.0%
!! TGGTGATGTTGATGATGAAT+CGG - Chr7:22214853-22214872 MsG0780037233.01.T01:CDS 35.0%
!! TTCAAGCTTTGAGTAAGAAG+TGG - Chr7:22213934-22213953 MsG0780037233.01.T01:CDS 35.0%
CGAAGAGAATTACACTGAGA+TGG - Chr7:22214580-22214599 MsG0780037233.01.T01:intron 40.0%
TAAGATCGGTGACTTAGGTT+TGG - Chr7:22214484-22214503 MsG0780037233.01.T01:intron 40.0%
TAGGTTAAGATCGGTGACTT+AGG - Chr7:22214479-22214498 MsG0780037233.01.T01:intron 40.0%
TTTAGGGACACCGGAATTTA+TGG - Chr7:22214544-22214563 MsG0780037233.01.T01:intron 40.0%
!! AACTCTGGTGCCATAAATTC+CGG + Chr7:22214557-22214576 None:intergenic 40.0%
!!! ACATTCAGTTTTAGGGACAC+CGG - Chr7:22214535-22214554 MsG0780037233.01.T01:intron 40.0%
GGAGGGATGTGATCAATACA+TGG - Chr7:22213843-22213862 MsG0780037233.01.T01:CDS 45.0%
TGTCAACGGAAATACTGGTC+AGG - Chr7:22214043-22214062 MsG0780037233.01.T01:CDS 45.0%
TTAGGTTTGGCAACGATCGT+GGG - Chr7:22214497-22214516 MsG0780037233.01.T01:intron 45.0%
! AAGGTGTCTTGCTCAACCAA+GGG - Chr7:22214766-22214785 MsG0780037233.01.T01:intron 45.0%
!! AAAGGTGTCTTGCTCAACCA+AGG - Chr7:22214765-22214784 MsG0780037233.01.T01:intron 45.0%
CTTAGGTTTGGCAACGATCG+TGG - Chr7:22214496-22214515 MsG0780037233.01.T01:intron 50.0%
TCATCTCATTCACCCGAGCT+AGG - Chr7:22214114-22214133 MsG0780037233.01.T01:CDS 50.0%
TCAGCAGAAGGTCTAGCCCT+TGG + Chr7:22214785-22214804 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 22213806 22214886 22213806 ID=MsG0780037233.01;Name=MsG0780037233.01
Chr7 mRNA 22213806 22214886 22213806 ID=MsG0780037233.01.T01;Parent=MsG0780037233.01;Name=MsG0780037233.01.T01;_AED=0.25;_eAED=0.25;_QI=0|0|0|1|1|1|2|0|159
Chr7 exon 22214812 22214886 22214812 ID=MsG0780037233.01.T01:exon:18455;Parent=MsG0780037233.01.T01
Chr7 exon 22213806 22214210 22213806 ID=MsG0780037233.01.T01:exon:18454;Parent=MsG0780037233.01.T01
Chr7 CDS 22214812 22214886 22214812 ID=MsG0780037233.01.T01:cds;Parent=MsG0780037233.01.T01
Chr7 CDS 22213806 22214210 22213806 ID=MsG0780037233.01.T01:cds;Parent=MsG0780037233.01.T01
Gene Sequence

>MsG0780037233.01.T01

ATGACTAACAAAAACATCATTGCACTTTACAATGTTTGGAGGGATGTGATCAATACATGGAATTTCATCACTGAGGTTAAGATCGGTGACTTAGGTTTGGCAACGATCGTGGGAAAGAATCATTCAGCACATTCAGTTTTAGGGACACCGGAATTTATGGCACCAGAGTTATACGAAGAGAATTACACTGAGATGGTTGACATATACTCATTTGGAATGTTAGTACTAGAGATGGTGACACTAGAGATTCCTTATAGCGAATGTGATAGTGTTGCGAAGATATACAAAAAGGTGTCTTCAGGTGTGAGACCTCAATCCTTGAACAAGATTAAAGATGTTGAAGTGAAGGCTTTCATTGAAAGGTGTCTTGCTCAACCAAGGGCTAGACCTTCTGCTGATGAATTGCTAAAAGATCCTTTTTTTGATGTGTTAGATTGTGATGAAAATGGTGATGTTGATGATGAATCGGTTATTTTATGA
Protein sequence

>MsG0780037233.01.T01

MTNKNIIALYNVWRDVINTWNFITEVKIGDLGLATIVGKNHSAHSVLGTPEFMAPELYEENYTEMVDIYSFGMLVLEMVTLEIPYSECDSVAKIYKKVSSGVRPQSLNKIKDVEVKAFIERCLAQPRARPSADELLKDPFFDVLDCDENGDVDDESVIL*