AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037256.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037256.01.T01 MTR_0250s0040 77.742 310 24 2 73 382 1 265 1.21e-172 482
MsG0780037256.01.T01 MTR_6g047570 69.851 335 79 5 61 382 11 336 6.32e-157 445
MsG0780037256.01.T01 MTR_0011s0260 65.588 340 85 6 72 381 22 359 4.08e-133 385
MsG0780037256.01.T01 MTR_0011s0210 64.809 341 88 6 72 382 22 360 6.16e-131 380
MsG0780037256.01.T01 MTR_4g066460 63.467 323 90 8 72 382 23 329 1.47e-128 372
MsG0780037256.01.T01 MTR_4g067010 63.492 315 89 8 72 379 23 318 1.97e-127 370
MsG0780037256.01.T01 MTR_4g066380 60.736 326 86 7 72 379 22 323 3.10e-111 328
MsG0780037256.01.T01 MTR_0246s0020 50.267 374 122 10 64 382 15 379 2.97e-99 300
MsG0780037256.01.T01 MTR_0246s0020 46.995 366 128 11 64 374 15 369 8.59e-85 262
MsG0780037256.01.T01 MTR_6g047550 61.925 239 55 6 61 272 11 240 7.59e-80 246
MsG0780037256.01.T01 MTR_4g098035 44.638 345 136 12 70 382 21 342 1.13e-72 230
MsG0780037256.01.T01 MTR_0246s0050 44.477 344 136 12 71 382 1 321 2.81e-72 228
MsG0780037256.01.T01 MTR_5g014520 43.692 325 162 7 68 381 19 333 1.61e-61 201
MsG0780037256.01.T01 MTR_5g014560 40.000 325 149 9 67 381 19 307 7.83e-59 193
MsG0780037256.01.T01 MTR_2g010450 44.976 209 97 4 182 379 151 352 3.33e-49 170
MsG0780037256.01.T01 MTR_5g014600 36.688 308 167 9 98 377 27 334 2.49e-47 164
MsG0780037256.01.T01 MTR_4g009540 44.595 222 102 8 174 378 114 331 1.49e-46 162
MsG0780037256.01.T01 MTR_4g097940 37.868 272 154 6 113 372 52 320 1.19e-45 159
MsG0780037256.01.T01 MTR_4g097920 35.294 272 161 5 113 372 37 305 1.31e-43 154
MsG0780037256.01.T01 MTR_4g097920 35.294 272 161 5 113 372 52 320 2.05e-43 154
MsG0780037256.01.T01 MTR_4g009110 40.889 225 110 7 174 378 129 350 1.07e-42 152
MsG0780037256.01.T01 MTR_4g092700 43.915 189 94 3 197 379 150 332 1.06e-41 149
MsG0780037256.01.T01 MTR_8g009020 46.369 179 85 4 204 373 142 318 2.98e-41 148
MsG0780037256.01.T01 MTR_4g097950 45.361 194 93 4 196 379 61 251 3.10e-40 143
MsG0780037256.01.T01 MTR_4g009540 44.776 201 90 8 174 357 114 310 6.80e-40 144
MsG0780037256.01.T01 MTR_7g080780 40.435 230 115 5 157 378 101 316 1.57e-39 143
MsG0780037256.01.T01 MTR_7g080780 40.435 230 115 5 157 378 114 329 2.11e-39 143
MsG0780037256.01.T01 MTR_5g014640 43.503 177 95 3 202 377 151 323 1.53e-38 140
MsG0780037256.01.T01 MTR_2g104490 41.711 187 103 4 188 372 120 302 1.24e-37 138
MsG0780037256.01.T01 MTR_2g104550 40.609 197 112 3 188 381 121 315 4.28e-37 137
MsG0780037256.01.T01 MTR_2g104650 40.265 226 112 5 161 376 55 267 1.33e-35 132
MsG0780037256.01.T01 MTR_2g104560 40.449 178 96 3 206 379 55 226 5.38e-34 126
MsG0780037256.01.T01 MTR_2g104490 40.698 172 96 4 188 357 120 287 2.54e-31 120
MsG0780037256.01.T01 MTR_8g009010 42.105 171 62 3 204 373 133 267 3.23e-31 121
MsG0780037256.01.T01 MTR_8g069740 39.429 175 101 3 186 356 92 265 3.04e-30 117
MsG0780037256.01.T01 MTR_2g104530 33.197 244 128 6 139 373 52 269 5.35e-29 114
MsG0780037256.01.T01 MTR_2g104590 34.272 213 100 6 182 376 32 222 1.89e-28 111
MsG0780037256.01.T01 MTR_7g017120 76.389 72 17 0 1 72 1 72 1.86e-27 109
MsG0780037256.01.T01 MTR_7g017150 76.389 72 17 0 1 72 1 72 1.86e-27 109
MsG0780037256.01.T01 MTR_2g104500 37.079 178 99 3 205 378 104 272 8.89e-27 108
MsG0780037256.01.T01 MTR_5g014550 47.619 126 58 3 235 356 54 175 2.03e-26 105
MsG0780037256.01.T01 MTR_4g009420 34.839 155 69 3 228 375 65 194 1.09e-22 95.1
MsG0780037256.01.T01 MTR_7g451650 36.129 155 75 4 228 375 57 194 1.32e-22 94.7
MsG0780037256.01.T01 MTR_4g009510 34.132 167 86 4 216 375 53 202 3.36e-21 90.9
MsG0780037256.01.T01 MTR_7g050350 35.570 149 72 4 234 375 1 132 4.42e-21 88.6
MsG0780037256.01.T01 MTR_7g451650 35.570 149 72 4 234 375 1 132 4.42e-21 88.6
MsG0780037256.01.T01 MTR_8g067280 32.432 185 105 5 184 349 434 617 1.54e-16 81.6
MsG0780037256.01.T01 MTR_1g072320 28.834 163 98 4 191 338 452 611 2.92e-15 77.8
MsG0780037256.01.T01 MTR_3g498695 26.263 198 130 3 184 368 277 471 1.63e-14 75.1
MsG0780037256.01.T01 MTR_5g030430 29.944 177 104 5 191 349 474 648 2.12e-14 75.1
MsG0780037256.01.T01 MTR_8g024770 31.933 119 67 3 205 314 279 392 3.35e-14 74.3
MsG0780037256.01.T01 MTR_8g024790 26.203 187 111 4 187 354 263 441 5.92e-14 73.6
MsG0780037256.01.T01 MTR_3g498695 26.263 198 129 4 184 368 277 470 1.07e-13 72.8
MsG0780037256.01.T01 MTR_7g451650 32.847 137 68 4 228 357 57 176 2.23e-13 68.6
MsG0780037256.01.T01 MTR_4g009420 31.387 137 62 3 228 357 65 176 5.26e-13 67.8
MsG0780037256.01.T01 MTR_8g098275 42.466 73 42 0 197 269 393 465 1.84e-12 68.9
MsG0780037256.01.T01 MTR_8g098275 42.466 73 42 0 197 269 300 372 1.86e-12 68.9
MsG0780037256.01.T01 MTR_8g027495 46.154 65 35 0 205 269 458 522 1.95e-12 68.9
MsG0780037256.01.T01 MTR_8g098275 42.466 73 42 0 197 269 236 308 2.06e-12 68.6
MsG0780037256.01.T01 MTR_7g117670 29.861 144 93 3 205 348 402 537 2.51e-12 68.6
MsG0780037256.01.T01 MTR_3g030700 28.235 170 117 2 192 356 183 352 3.10e-12 67.8
MsG0780037256.01.T01 MTR_7g096350 30.573 157 83 6 128 258 252 408 5.46e-12 67.4
MsG0780037256.01.T01 MTR_3g007450 76.316 38 9 0 1 38 1 38 1.10e-11 59.7
MsG0780037256.01.T01 MTR_1g112680 26.738 187 106 5 186 341 295 481 3.84e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037256.01.T01 AT2G22760 44.330 194 95 6 196 377 103 295 2.81e-45 158
MsG0780037256.01.T01 AT4G37850 42.647 204 102 5 188 379 127 327 8.97e-44 155
MsG0780037256.01.T01 AT4G37850 42.647 204 102 5 188 379 127 327 8.97e-44 155
MsG0780037256.01.T01 AT2G22750 45.455 198 99 4 189 380 111 305 4.54e-39 142
MsG0780037256.01.T01 AT2G22750 45.455 198 99 4 189 380 135 329 5.94e-39 142
MsG0780037256.01.T01 AT2G22750 45.455 198 99 4 189 380 139 333 6.77e-39 142
MsG0780037256.01.T01 AT2G22760 43.353 173 86 5 196 357 103 274 1.23e-37 137
MsG0780037256.01.T01 AT2G22750 45.455 198 98 5 189 380 111 304 1.31e-37 138
MsG0780037256.01.T01 AT2G22750 45.455 198 98 5 189 380 139 332 1.69e-37 138
MsG0780037256.01.T01 AT2G22770 38.053 226 111 6 177 375 94 317 2.10e-35 132
MsG0780037256.01.T01 AT4G17880 31.765 170 109 4 191 354 397 565 4.13e-16 80.5
MsG0780037256.01.T01 AT1G32640 30.667 150 95 2 205 349 452 597 7.14e-16 79.7
MsG0780037256.01.T01 AT5G46760 29.189 185 114 7 191 362 396 576 1.83e-14 75.5
MsG0780037256.01.T01 AT1G63650 29.586 169 96 5 205 353 405 570 4.56e-14 73.9
MsG0780037256.01.T01 AT1G63650 29.586 169 96 5 205 353 405 570 4.56e-14 73.9
MsG0780037256.01.T01 AT1G63650 29.586 169 96 5 205 353 405 570 4.56e-14 73.9
MsG0780037256.01.T01 AT5G41315 29.310 174 95 5 205 353 446 616 4.39e-13 71.2
MsG0780037256.01.T01 AT5G41315 29.310 174 95 5 205 353 441 611 4.57e-13 71.2
MsG0780037256.01.T01 AT5G41315 28.161 174 97 4 205 353 449 619 4.90e-13 70.9
MsG0780037256.01.T01 AT3G26744 29.091 165 107 2 206 360 308 472 2.26e-12 68.6
MsG0780037256.01.T01 AT3G26744 29.091 165 107 2 206 360 308 472 2.26e-12 68.6
MsG0780037256.01.T01 AT3G26744 29.091 165 107 2 206 360 308 472 2.26e-12 68.6
MsG0780037256.01.T01 AT4G16430 40.244 82 44 1 189 265 299 380 2.80e-12 68.2
MsG0780037256.01.T01 AT2G46510 41.772 79 41 2 191 264 376 454 6.32e-12 67.4
MsG0780037256.01.T01 AT1G01260 33.036 112 65 2 195 299 416 524 6.49e-12 67.4
MsG0780037256.01.T01 AT1G01260 33.036 112 65 2 195 299 416 524 6.49e-12 67.4
MsG0780037256.01.T01 AT1G01260 33.036 112 65 2 195 299 416 524 6.49e-12 67.4
MsG0780037256.01.T01 AT3G26744 28.846 156 101 2 206 351 308 463 1.61e-11 65.9
MsG0780037256.01.T01 AT1G12860 29.240 171 114 4 206 370 268 437 1.86e-11 65.9
MsG0780037256.01.T01 AT1G12860 30.263 152 100 3 206 351 268 419 3.96e-11 64.7

Find 57 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATTTGTAGTGGATGAATT+TGG 0.179475 7:+22534262 None:intergenic
CAAGTGGAAGCAAGAGTCTT+AGG 0.227099 7:-22533152 MsG0780037256.01.T01:CDS
CCCGAATTTCCTTATAGATT+TGG 0.259158 7:-22534476 MsG0780037256.01.T01:CDS
TCTTATTCCTAACCTTAAAA+AGG 0.267726 7:-22534050 MsG0780037256.01.T01:intron
TCCAAATCTATAAGGAAATT+CGG 0.272428 7:+22534475 None:intergenic
AATAGTAGTGTCTTACCTTT+TGG 0.280739 7:-22533035 MsG0780037256.01.T01:CDS
AATTTGTAGTGGATGAATTT+GGG 0.291366 7:+22534263 None:intergenic
ACAAATTCCTTACAATTTAG+TGG 0.309622 7:-22534247 MsG0780037256.01.T01:CDS
GATGAGTTAGAAGAAAGTTT+TGG 0.345146 7:+22534319 None:intergenic
CAGAAGAGTCATCGAGAAAA+AGG 0.350658 7:-22534159 MsG0780037256.01.T01:CDS
TTCAAATCCACTAAATTGTA+AGG 0.351709 7:+22534240 None:intergenic
GGGGCTTATAGTTAAAATTA+TGG 0.355304 7:-22533090 MsG0780037256.01.T01:CDS
ATCAACAGTGTTTGACTTCA+AGG 0.362949 7:-22534405 MsG0780037256.01.T01:CDS
GAAGCTCTTCCAAATCTATA+AGG 0.363733 7:+22534467 None:intergenic
CAATCAAGATTACACAAGTA+TGG 0.370633 7:-22537368 MsG0780037256.01.T01:CDS
CCAAATCTATAAGGAAATTC+GGG 0.373199 7:+22534476 None:intergenic
ACTCTTGCTTCCACTTGAAA+TGG 0.394913 7:+22533158 None:intergenic
TTACACAAGTATGGAATGTC+TGG 0.413572 7:-22537359 MsG0780037256.01.T01:CDS
ACCAGTGTCTCCAACTGAAA+TGG 0.420736 7:-22534209 MsG0780037256.01.T01:CDS
GAGAGCCTTCATAGTGTTGT+TGG 0.422784 7:-22533185 MsG0780037256.01.T01:CDS
TAGGGAAATATATGTTGATT+CGG 0.438258 7:-22533133 MsG0780037256.01.T01:CDS
ATCACTATAAATGCCTGGTT+TGG 0.451938 7:+22533229 None:intergenic
AAGTGGAAGCAAGAGTCTTA+GGG 0.455524 7:-22533151 MsG0780037256.01.T01:CDS
AGGCTACAACATGAACATAA+AGG 0.462195 7:-22532454 MsG0780037256.01.T01:CDS
TTTGATGACAGAATCAACTT+TGG 0.476345 7:-22537425 MsG0780037256.01.T01:CDS
TCCATTTCAGTTGGAGACAC+TGG 0.482760 7:+22534208 None:intergenic
GGTCTCTACCTGAGCAATGA+TGG 0.507552 7:+22532992 None:intergenic
AAAAGGTCTCGTGGTAATCA+TGG 0.510954 7:-22534142 MsG0780037256.01.T01:CDS
CAAGTGGTTGTGACCAAACC+AGG 0.515887 7:-22533242 MsG0780037256.01.T01:CDS
GGATCCAATGCAAAGAGCAC+AGG 0.517019 7:-22533112 MsG0780037256.01.T01:CDS
AAATTATGGTCGAAATTCAA+AGG 0.523147 7:-22533076 MsG0780037256.01.T01:CDS
CGACGTGACCATCATTGCTC+AGG 0.526856 7:-22533000 MsG0780037256.01.T01:intron
TTGTCATCACTATAAATGCC+TGG 0.527391 7:+22533224 None:intergenic
GTAAACCAACAACACTATGA+AGG 0.536411 7:+22533180 None:intergenic
ACAGAATCAACTTTGGCTTG+TGG 0.539830 7:-22537418 MsG0780037256.01.T01:CDS
CGAATACAATTTAATTGCTG+AGG 0.543999 7:-22534506 MsG0780037256.01.T01:CDS
TCATGGTCATGATCATATCA+TGG 0.552733 7:-22534125 MsG0780037256.01.T01:CDS
GATCCAATGCAAAGAGCACA+GGG 0.577809 7:-22533111 MsG0780037256.01.T01:CDS
CATTTAAAGAGAAATTGTCC+AGG 0.579701 7:-22537335 MsG0780037256.01.T01:CDS
TTTGGGGTGTTGTCAAAACA+TGG 0.585137 7:+22534280 None:intergenic
AAGGCTCTCATCACATGAAG+AGG 0.585610 7:+22533199 None:intergenic
TCGATGATAGAATCTCCAAA+AGG 0.598134 7:+22533020 None:intergenic
ACTTCAATGCTGCCATGCGT+AGG 0.601033 7:+22532418 None:intergenic
TGTTGGTTTACCATTTCAAG+TGG 0.603001 7:-22533168 MsG0780037256.01.T01:CDS
TACACAAGTATGGAATGTCT+GGG 0.603492 7:-22537358 MsG0780037256.01.T01:CDS
CTTGTGGAAACTACAAGTCA+AGG 0.607984 7:-22537402 MsG0780037256.01.T01:CDS
AAATTGTAAGGAATTTGTAG+TGG 0.612033 7:+22534252 None:intergenic
TCCAATGCAAAGAGCACAGG+GGG 0.615078 7:-22533109 MsG0780037256.01.T01:CDS
GTTGCTGAGAGCTGTGTGAG+TGG 0.619632 7:+22534381 None:intergenic
ATTTAAAGAGAAATTGTCCA+GGG 0.623284 7:-22537334 MsG0780037256.01.T01:CDS
AACTACAAGTCAAGGATGTG+CGG 0.632019 7:-22537394 MsG0780037256.01.T01:CDS
AACAAAGATAGAGTCACAAG+TGG 0.633558 7:-22533258 MsG0780037256.01.T01:CDS
TTTAAAGAGAAATTGTCCAG+GGG 0.638694 7:-22537333 MsG0780037256.01.T01:CDS
ATTTGTAGTGGATGAATTTG+GGG 0.649171 7:+22534264 None:intergenic
ACTTGTGAAGAACCTACGCA+TGG 0.684270 7:-22532430 MsG0780037256.01.T01:CDS
TTAAAGAGAAATTGTCCAGG+GGG 0.688823 7:-22537332 MsG0780037256.01.T01:CDS
ATCCAATGCAAAGAGCACAG+GGG 0.772272 7:-22533110 MsG0780037256.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTGTTTAATACTAATAT+GGG - Chr7:22534101-22534120 MsG0780037256.01.T01:CDS 10.0%
!! TATATTGTTTAATACTAATA+TGG - Chr7:22534100-22534119 MsG0780037256.01.T01:CDS 10.0%
!!! AATCTTAATTATTTTATAGA+TGG - Chr7:22537387-22537406 MsG0780037256.01.T01:CDS 10.0%
!!! CTTGAAAATAATTTTAATTA+GGG - Chr7:22533876-22533895 MsG0780037256.01.T01:intron 10.0%
!!! TAATACAATTTTTTAGTTTT+TGG - Chr7:22537082-22537101 MsG0780037256.01.T01:intron 10.0%
!!! TCTTGAAAATAATTTTAATT+AGG - Chr7:22533875-22533894 MsG0780037256.01.T01:intron 10.0%
!! AAAAATAATCGTCAATTTAT+TGG - Chr7:22536185-22536204 MsG0780037256.01.T01:intron 15.0%
!! AATATAAACATAGTACAAAA+TGG + Chr7:22534250-22534269 None:intergenic 15.0%
!! AGTAAATGAATAAAGAAATA+TGG - Chr7:22536265-22536284 MsG0780037256.01.T01:intron 15.0%
!! ATAATTGTTATCATCTTATA+AGG - Chr7:22537159-22537178 MsG0780037256.01.T01:intron 15.0%
!! ATACAAAAATACTATAATCT+TGG - Chr7:22536444-22536463 MsG0780037256.01.T01:intron 15.0%
!! ATCAAAAGATATTCAATATT+TGG + Chr7:22536063-22536082 None:intergenic 15.0%
!! TAAAAAAATAGCATTAGAAT+AGG - Chr7:22533441-22533460 MsG0780037256.01.T01:intron 15.0%
!! TATAATAATAGTAATAGTGA+TGG + Chr7:22537110-22537129 None:intergenic 15.0%
!! TCCAAAAAAAATCATATTAA+GGG + Chr7:22534889-22534908 None:intergenic 15.0%
!! TGTATTAAAAAAAATGTTAG+TGG + Chr7:22537069-22537088 None:intergenic 15.0%
!! TTGTTTGTAATATGAATATT+TGG - Chr7:22534789-22534808 MsG0780037256.01.T01:intron 15.0%
!!! ATTAGTTTTTTTTTTTGTTG+AGG + Chr7:22534860-22534879 None:intergenic 15.0%
!!! TAAGTTTAAAACATAATTAG+TGG - Chr7:22536326-22536345 MsG0780037256.01.T01:intron 15.0%
!!! TTAGTTTTTTTTTTTGTTGA+GGG + Chr7:22534859-22534878 None:intergenic 15.0%
!!! TTTTTTTTAAGAAGCTAAAA+TGG - Chr7:22534277-22534296 MsG0780037256.01.T01:CDS 15.0%
!! AAAGGAAATTGATTGTATAT+TGG - Chr7:22534751-22534770 MsG0780037256.01.T01:intron 20.0%
!! AATGAATAAAGAAATATGGT+TGG - Chr7:22536269-22536288 MsG0780037256.01.T01:intron 20.0%
!! AATGTTAGTGGTAAAATTAA+AGG + Chr7:22537057-22537076 None:intergenic 20.0%
!! ATAATCATTTGATACATCAT+TGG + Chr7:22534618-22534637 None:intergenic 20.0%
!! ATAATCTTGGTTACATTATT+TGG - Chr7:22536457-22536476 MsG0780037256.01.T01:intron 20.0%
!! ATGTTAGTGGTAAAATTAAA+GGG + Chr7:22537056-22537075 None:intergenic 20.0%
!! CATTTGTGAATTTAGAAAAT+AGG + Chr7:22533763-22533782 None:intergenic 20.0%
!! CATTTGTGAATTTCAAAAAT+AGG + Chr7:22535286-22535305 None:intergenic 20.0%
!! CGATATTGTAAAAATATGTT+AGG - Chr7:22536499-22536518 MsG0780037256.01.T01:intron 20.0%
!! CTCCAAAAAAAATCATATTA+AGG + Chr7:22534890-22534909 None:intergenic 20.0%
!! GTTAATGTTATGAAATGTTT+AGG + Chr7:22534499-22534518 None:intergenic 20.0%
!! TAATATAAAGAGATAAGAGA+TGG + Chr7:22536900-22536919 None:intergenic 20.0%
!! TAATCATTTGATACATCATT+GGG + Chr7:22534617-22534636 None:intergenic 20.0%
!! TATGAATATTTGGCATAATT+AGG - Chr7:22534799-22534818 MsG0780037256.01.T01:intron 20.0%
!! TATTGTAAAAATATGTTAGG+TGG - Chr7:22536502-22536521 MsG0780037256.01.T01:intron 20.0%
!! TGAATTTCAAAAATAGGAAA+GGG + Chr7:22535280-22535299 None:intergenic 20.0%
!!! ACCCTTAATATGATTTTTTT+TGG - Chr7:22534885-22534904 MsG0780037256.01.T01:intron 20.0%
!!! ACTACAACATTTTTTGTTTT+AGG - Chr7:22537210-22537229 MsG0780037256.01.T01:intron 20.0%
!!! ATTAAATTTTGTTCGATGAA+AGG + Chr7:22536012-22536031 None:intergenic 20.0%
!!! ATTATTTTATAGATGGATGA+AGG - Chr7:22537394-22537413 MsG0780037256.01.T01:CDS 20.0%
!!! ATTGTAGAAGTATTATACAT+AGG + Chr7:22534936-22534955 None:intergenic 20.0%
!!! ATTTTGTTGTCTTTTGATTT+AGG - Chr7:22537326-22537345 MsG0780037256.01.T01:CDS 20.0%
!!! CTATTTTCTAAATTCACAAA+TGG - Chr7:22533761-22533780 MsG0780037256.01.T01:intron 20.0%
!!! CTATTTTTGAAATTCACAAA+TGG - Chr7:22535284-22535303 MsG0780037256.01.T01:intron 20.0%
!!! CTTATGGTTTTTAGAATATA+AGG + Chr7:22535089-22535108 None:intergenic 20.0%
!!! GTGGTAAAAAATATTTTTGA+CGG - Chr7:22536353-22536372 MsG0780037256.01.T01:intron 20.0%
!!! TATAAGGAGTATTTTATTCT+AGG - Chr7:22537175-22537194 MsG0780037256.01.T01:intron 20.0%
!!! TCTTATTTATAGAAGGAAAT+TGG + Chr7:22533258-22533277 None:intergenic 20.0%
!!! TGTTAGTATGACTTTTAAAA+AGG - Chr7:22534733-22534752 MsG0780037256.01.T01:intron 20.0%
!!! TTATCCATTTTGTTTGTAAT+AGG + Chr7:22534043-22534062 None:intergenic 20.0%
!!! TTGCTGAAACATTATATTTT+AGG + Chr7:22534545-22534564 None:intergenic 20.0%
!!! TTTTAGAATATAAGGTAACA+TGG + Chr7:22535081-22535100 None:intergenic 20.0%
! AAAGATTAAGTATGTCCTTA+TGG - Chr7:22532637-22532656 MsG0780037256.01.T01:intron 25.0%
! AAATTATGGTCGAAATTCAA+AGG - Chr7:22536792-22536811 MsG0780037256.01.T01:intron 25.0%
! AAATTGTAAGGAATTTGTAG+TGG + Chr7:22535619-22535638 None:intergenic 25.0%
! AACAAAAAATGTTGTAGTGT+TGG + Chr7:22537208-22537227 None:intergenic 25.0%
! AATGTTATGAAATGTTTAGG+TGG + Chr7:22534496-22534515 None:intergenic 25.0%
! ACAAATTCCTTACAATTTAG+TGG - Chr7:22535621-22535640 MsG0780037256.01.T01:intron 25.0%
! ACGCTATATTTACAAATTGA+AGG + Chr7:22536235-22536254 None:intergenic 25.0%
! AGTTGAGAAAATTACAACTT+TGG + Chr7:22533184-22533203 None:intergenic 25.0%
! ATGTTATGAAATGTTTAGGT+GGG + Chr7:22534495-22534514 None:intergenic 25.0%
! ATTTAAAGAGAAATTGTCCA+GGG - Chr7:22532534-22532553 MsG0780037256.01.T01:intron 25.0%
! CGCTATATTTACAAATTGAA+GGG + Chr7:22536234-22536253 None:intergenic 25.0%
! CTATCCTATTACAAACAAAA+TGG - Chr7:22534036-22534055 MsG0780037256.01.T01:intron 25.0%
! GAATCCAATTCTTAAACATT+CGG - Chr7:22533960-22533979 MsG0780037256.01.T01:intron 25.0%
! GTGAATTTAGAAAATAGGAA+GGG + Chr7:22533758-22533777 None:intergenic 25.0%
! GTGAATTTCAAAAATAGGAA+AGG + Chr7:22535281-22535300 None:intergenic 25.0%
! TCCAAATCTATAAGGAAATT+CGG + Chr7:22535396-22535415 None:intergenic 25.0%
! TCTTATTCCTAACCTTAAAA+AGG - Chr7:22535818-22535837 MsG0780037256.01.T01:intron 25.0%
! TGATTATATATTAACCCACT+TGG - Chr7:22534631-22534650 MsG0780037256.01.T01:intron 25.0%
! TGTGAATTTAGAAAATAGGA+AGG + Chr7:22533759-22533778 None:intergenic 25.0%
! TTAAAACATAATTAGTGGTG+TGG - Chr7:22536331-22536350 MsG0780037256.01.T01:intron 25.0%
! TTCAAATCCACTAAATTGTA+AGG + Chr7:22535631-22535650 None:intergenic 25.0%
!! GATTTGGTAAGAAAATCAAA+AGG - Chr7:22533724-22533743 MsG0780037256.01.T01:intron 25.0%
!! TAGGGAAATATATGTTGATT+CGG - Chr7:22536735-22536754 MsG0780037256.01.T01:intron 25.0%
!! TTACTTCTTCTACCTTTTTA+AGG + Chr7:22535833-22535852 None:intergenic 25.0%
!! TTCATATTTTCCATTTCAGT+TGG + Chr7:22535672-22535691 None:intergenic 25.0%
!! TTTTCTAAATTCACAAATGG+TGG - Chr7:22533764-22533783 MsG0780037256.01.T01:intron 25.0%
!!! AATTATTTTTCCTTTTTGGC+TGG + Chr7:22533153-22533172 None:intergenic 25.0%
!!! AATTTGTAGTGGATGAATTT+GGG + Chr7:22535608-22535627 None:intergenic 25.0%
!!! ATTTTAAAAGCTAGCTAAGT+TGG + Chr7:22535866-22535885 None:intergenic 25.0%
!!! CTAGAAATTTCTTTTTTTGC+AGG - Chr7:22535332-22535351 MsG0780037256.01.T01:intron 25.0%
!!! CTGCAATTATTTTTCCTTTT+TGG + Chr7:22533157-22533176 None:intergenic 25.0%
!!! TTTTTTTTTTGTTGAGGGAA+GGG + Chr7:22534854-22534873 None:intergenic 25.0%
!!! TTTTTTTTTTTGTTGAGGGA+AGG + Chr7:22534855-22534874 None:intergenic 25.0%
AAAAGGACAATTATTGCTAG+CGG - Chr7:22532679-22532698 MsG0780037256.01.T01:intron 30.0%
AAACACTGTATTGTATCTCT+TGG - Chr7:22533479-22533498 MsG0780037256.01.T01:intron 30.0%
AAATAGCATTAGAATAGGAG+TGG - Chr7:22533446-22533465 MsG0780037256.01.T01:intron 30.0%
AACACTGTATTGTATCTCTT+GGG - Chr7:22533480-22533499 MsG0780037256.01.T01:intron 30.0%
AACATATTCCGAATACAAAG+TGG + Chr7:22533918-22533937 None:intergenic 30.0%
AATAGCATTAGAATAGGAGT+GGG - Chr7:22533447-22533466 MsG0780037256.01.T01:intron 30.0%
ACATATTCCGAATACAAAGT+GGG + Chr7:22533917-22533936 None:intergenic 30.0%
ATTATGTTAGCTGAAAAGTC+TGG - Chr7:22534300-22534319 MsG0780037256.01.T01:CDS 30.0%
CAACACCAAAACAATCAAAA+GGG - Chr7:22537016-22537035 MsG0780037256.01.T01:intron 30.0%
CAAGTGAAGTATACTCTTTA+TGG - Chr7:22532858-22532877 MsG0780037256.01.T01:intron 30.0%
CAATCAAGATTACACAAGTA+TGG - Chr7:22532500-22532519 MsG0780037256.01.T01:intron 30.0%
CATTTAAAGAGAAATTGTCC+AGG - Chr7:22532533-22532552 MsG0780037256.01.T01:intron 30.0%
CCAAATCTATAAGGAAATTC+GGG + Chr7:22535395-22535414 None:intergenic 30.0%
CGAATACAATTTAATTGCTG+AGG - Chr7:22535362-22535381 MsG0780037256.01.T01:intron 30.0%
GGAAGAACAACAATTTATGT+TGG - Chr7:22532928-22532947 MsG0780037256.01.T01:intron 30.0%
GGGGCTTATAGTTAAAATTA+TGG - Chr7:22536778-22536797 MsG0780037256.01.T01:intron 30.0%
GTATCATCTCTATAACTCTT+AGG - Chr7:22533413-22533432 MsG0780037256.01.T01:intron 30.0%
GTGGAGAATGCTTAATTATA+TGG + Chr7:22536927-22536946 None:intergenic 30.0%
TCATACTAACACATCGAAAT+TGG + Chr7:22534724-22534743 None:intergenic 30.0%
TGAAGTATACTCTTTATGGT+GGG - Chr7:22532862-22532881 MsG0780037256.01.T01:intron 30.0%
TGTCGGTATAGATAATAGAA+GGG - Chr7:22532892-22532911 MsG0780037256.01.T01:intron 30.0%
TTATATATTAACCCACTTGG+CGG - Chr7:22534634-22534653 MsG0780037256.01.T01:intron 30.0%
TTCACATAGTGATAATTCTC+TGG - Chr7:22533536-22533555 MsG0780037256.01.T01:intron 30.0%
TTGTCGGTATAGATAATAGA+AGG - Chr7:22532891-22532910 MsG0780037256.01.T01:intron 30.0%
TTTAAAGAGAAATTGTCCAG+GGG - Chr7:22532535-22532554 MsG0780037256.01.T01:intron 30.0%
TTTGCCGAATGTTTAAGAAT+TGG + Chr7:22533967-22533986 None:intergenic 30.0%
! AATAGTAGTGTCTTACCTTT+TGG - Chr7:22536833-22536852 MsG0780037256.01.T01:intron 30.0%
! ACACTCAACTTGAAATGTTT+TGG + Chr7:22534206-22534225 None:intergenic 30.0%
! GAAATCAAAGCTACTTTCAA+AGG + Chr7:22534465-22534484 None:intergenic 30.0%
! GATGAGTTAGAAGAAAGTTT+TGG + Chr7:22535552-22535571 None:intergenic 30.0%
! TTTGATGACAGAATCAACTT+TGG - Chr7:22532443-22532462 MsG0780037256.01.T01:CDS 30.0%
!! ACTGTTGATTGTTTTGTTCT+TGG + Chr7:22535452-22535471 None:intergenic 30.0%
!! AGAAGAAAGTTTTGGTGAAA+AGG + Chr7:22535544-22535563 None:intergenic 30.0%
!! ATTTGTAGTGGATGAATTTG+GGG + Chr7:22535607-22535626 None:intergenic 30.0%
!! CTGTTGATTGTTTTGTTCTT+GGG + Chr7:22535451-22535470 None:intergenic 30.0%
!! CTTTACCCTTTTGATTGTTT+TGG + Chr7:22537024-22537043 None:intergenic 30.0%
!! GAATTTGTAGTGGATGAATT+TGG + Chr7:22535609-22535628 None:intergenic 30.0%
!! GCAATAATTGTCCTTTTTCA+TGG + Chr7:22532676-22532695 None:intergenic 30.0%
!! TAAGAAAGCATTTGTATGTG+AGG + Chr7:22534388-22534407 None:intergenic 30.0%
!! TAATTTTCTCAACTAGCTTG+CGG - Chr7:22533190-22533209 MsG0780037256.01.T01:CDS 30.0%
!!! CTTGAGTTTTTTCAGAAAGA+AGG + Chr7:22534436-22534455 None:intergenic 30.0%
!!! GTTTGAAACATCTTGTTTTG+TGG + Chr7:22536946-22536965 None:intergenic 30.0%
!!! TAAAAAGCGTTTGGAAGTTT+TGG - Chr7:22536571-22536590 MsG0780037256.01.T01:intron 30.0%
!!! TCTTCTACCTTTTTAAGGTT+AGG + Chr7:22535828-22535847 None:intergenic 30.0%
!!! TTTTTTTTTGTTGAGGGAAG+GGG + Chr7:22534853-22534872 None:intergenic 30.0%
AAACATAATTAGTGGTGTGG+TGG - Chr7:22536334-22536353 MsG0780037256.01.T01:intron 35.0%
AACAAAGATAGAGTCACAAG+TGG - Chr7:22536610-22536629 MsG0780037256.01.T01:intron 35.0%
AATCCACCTTCCAAAAACAT+GGG + Chr7:22534010-22534029 None:intergenic 35.0%
ACGTGAAGAAATTCTTGGAA+TGG - Chr7:22532827-22532846 MsG0780037256.01.T01:intron 35.0%
AGAAACCTTGCCTCATATTT+AGG - Chr7:22534908-22534927 MsG0780037256.01.T01:intron 35.0%
AGGCTACAACATGAACATAA+AGG - Chr7:22537414-22537433 MsG0780037256.01.T01:CDS 35.0%
AGTGATAATTCTCTGGTTGT+CGG - Chr7:22533543-22533562 MsG0780037256.01.T01:intron 35.0%
ATCACTATAAATGCCTGGTT+TGG + Chr7:22536642-22536661 None:intergenic 35.0%
CACAACACAAGAATATAACG+TGG + Chr7:22533610-22533629 None:intergenic 35.0%
CATATTCCGAATACAAAGTG+GGG + Chr7:22533916-22533935 None:intergenic 35.0%
CATTAGTTATGCACAAGGAA+AGG + Chr7:22534825-22534844 None:intergenic 35.0%
CCAACACCAAAACAATCAAA+AGG - Chr7:22537015-22537034 MsG0780037256.01.T01:intron 35.0%
CCCGAATTTCCTTATAGATT+TGG - Chr7:22535392-22535411 MsG0780037256.01.T01:intron 35.0%
CCTTCTATAAATAAGACAGC+AGG - Chr7:22533262-22533281 MsG0780037256.01.T01:CDS 35.0%
GAAACCTTGCTGAAAGATTA+TGG + Chr7:22532806-22532825 None:intergenic 35.0%
GAAGCTCTTCCAAATCTATA+AGG + Chr7:22535404-22535423 None:intergenic 35.0%
GAAGTATACTCTTTATGGTG+GGG - Chr7:22532863-22532882 MsG0780037256.01.T01:intron 35.0%
GCAGTACAAGTATAATTGTG+TGG - Chr7:22533029-22533048 MsG0780037256.01.T01:CDS 35.0%
GTAAACCAACAACACTATGA+AGG + Chr7:22536691-22536710 None:intergenic 35.0%
GTCGGTATAGATAATAGAAG+GGG - Chr7:22532893-22532912 MsG0780037256.01.T01:intron 35.0%
GTGAAGTATACTCTTTATGG+TGG - Chr7:22532861-22532880 MsG0780037256.01.T01:intron 35.0%
TACACAAGTATGGAATGTCT+GGG - Chr7:22532510-22532529 MsG0780037256.01.T01:intron 35.0%
TACATAGGAGCCTAAATATG+AGG + Chr7:22534921-22534940 None:intergenic 35.0%
TACATGGAGAAATGCAACAA+AGG + Chr7:22535118-22535137 None:intergenic 35.0%
TAGTAATGTCTCCTTTGTTG+CGG - Chr7:22532592-22532611 MsG0780037256.01.T01:intron 35.0%
TCATGGTCATGATCATATCA+TGG - Chr7:22535743-22535762 MsG0780037256.01.T01:intron 35.0%
TCGATGATAGAATCTCCAAA+AGG + Chr7:22536851-22536870 None:intergenic 35.0%
TCGGTATAGATAATAGAAGG+GGG - Chr7:22532894-22532913 MsG0780037256.01.T01:intron 35.0%
TGATGCATTAGTTATGCACA+AGG + Chr7:22534830-22534849 None:intergenic 35.0%
TGTTGTGTTGGGAAATAACA+GGG + Chr7:22533663-22533682 None:intergenic 35.0%
TTAAAGAGAAATTGTCCAGG+GGG - Chr7:22532536-22532555 MsG0780037256.01.T01:intron 35.0%
TTACACAAGTATGGAATGTC+TGG - Chr7:22532509-22532528 MsG0780037256.01.T01:intron 35.0%
TTGTCATCACTATAAATGCC+TGG + Chr7:22536647-22536666 None:intergenic 35.0%
TTGTTGCATTTCTCCATGTA+GGG - Chr7:22535118-22535137 MsG0780037256.01.T01:intron 35.0%
TTTCCGCTATACCATGAAAA+AGG - Chr7:22532662-22532681 MsG0780037256.01.T01:intron 35.0%
TTTCGACGTGAAGAAATTCT+TGG - Chr7:22532822-22532841 MsG0780037256.01.T01:intron 35.0%
TTTGTTGCATTTCTCCATGT+AGG - Chr7:22535117-22535136 MsG0780037256.01.T01:intron 35.0%
! AAAGGGTAGATCATACCTTT+TGG + Chr7:22535263-22535282 None:intergenic 35.0%
! AGTTTCTGAAAAAGACTCTG+AGG - Chr7:22532562-22532581 MsG0780037256.01.T01:intron 35.0%
! ATCAACAGTGTTTGACTTCA+AGG - Chr7:22535463-22535482 MsG0780037256.01.T01:intron 35.0%
!! CCTGCTGTCTTATTTATAGA+AGG + Chr7:22533265-22533284 None:intergenic 35.0%
!! CTCAACTTGAAATGTTTTGG+AGG + Chr7:22534203-22534222 None:intergenic 35.0%
!! GAAAGAGCTTAAAAAGCGTT+TGG - Chr7:22536562-22536581 MsG0780037256.01.T01:intron 35.0%
!! TGTCCTTTTTCATGGTATAG+CGG + Chr7:22532668-22532687 None:intergenic 35.0%
!! TGTTGGTTTACCATTTCAAG+TGG - Chr7:22536700-22536719 MsG0780037256.01.T01:intron 35.0%
!!! CCTTTTGATTGTTTTGGTGT+TGG + Chr7:22537018-22537037 None:intergenic 35.0%
AAAAGGTCTCGTGGTAATCA+TGG - Chr7:22535726-22535745 MsG0780037256.01.T01:intron 40.0%
AACCTAATACACTCACTCCA+TGG + Chr7:22534686-22534705 None:intergenic 40.0%
AACTACAAGTCAAGGATGTG+CGG - Chr7:22532474-22532493 MsG0780037256.01.T01:intron 40.0%
AAGTGGAAGCAAGAGTCTTA+GGG - Chr7:22536717-22536736 MsG0780037256.01.T01:intron 40.0%
AATCCGCAACCTAAACGTTT+AGG + Chr7:22537276-22537295 None:intergenic 40.0%
AATCCGTTGCCTAAACGTTT+AGG - Chr7:22537264-22537283 MsG0780037256.01.T01:intron 40.0%
ACACTGAGTGAAAGCAAAAG+TGG - Chr7:22533289-22533308 MsG0780037256.01.T01:CDS 40.0%
ACTCTTGCTTCCACTTGAAA+TGG + Chr7:22536713-22536732 None:intergenic 40.0%
AGAGTGTGGGAAAAATACAC+CGG - Chr7:22533386-22533405 MsG0780037256.01.T01:intron 40.0%
AGTAATGTCTCCTTTGTTGC+GGG - Chr7:22532593-22532612 MsG0780037256.01.T01:intron 40.0%
ATCCACCTTCCAAAAACATG+GGG + Chr7:22534009-22534028 None:intergenic 40.0%
ATGAAAGAGCTTCTGCTTGA+GGG - Chr7:22533052-22533071 MsG0780037256.01.T01:CDS 40.0%
ATTATCATCTCCCGCAACAA+AGG + Chr7:22532606-22532625 None:intergenic 40.0%
CAAATCAGATAACCAGCTGT+TGG + Chr7:22533710-22533729 None:intergenic 40.0%
CAACAGCTGGTTATCTGATT+TGG - Chr7:22533708-22533727 MsG0780037256.01.T01:intron 40.0%
CAACCTAAACGTTTAGGCAA+CGG + Chr7:22537270-22537289 None:intergenic 40.0%
CAATCCACCTTCCAAAAACA+TGG + Chr7:22534011-22534030 None:intergenic 40.0%
CAGAAGAGTCATCGAGAAAA+AGG - Chr7:22535709-22535728 MsG0780037256.01.T01:intron 40.0%
CCATTATGAGCAAGTTTGGT+TGG + Chr7:22535149-22535168 None:intergenic 40.0%
CTTGTGGAAACTACAAGTCA+AGG - Chr7:22532466-22532485 MsG0780037256.01.T01:intron 40.0%
GCAACAAAGGACATGACTTA+TGG + Chr7:22535105-22535124 None:intergenic 40.0%
GCTTTACCCCACTTTGTATT+CGG - Chr7:22533907-22533926 MsG0780037256.01.T01:intron 40.0%
GTGTTGTGTTGGGAAATAAC+AGG + Chr7:22533664-22533683 None:intergenic 40.0%
GTTCAATGCTGTGTTGTGTT+GGG + Chr7:22533674-22533693 None:intergenic 40.0%
TAACGTGGAAACTCCAAAAC+CGG + Chr7:22533595-22533614 None:intergenic 40.0%
TATCATCATCAACCAACAGC+TGG - Chr7:22533695-22533714 MsG0780037256.01.T01:intron 40.0%
TGCACCATAATCTTTCAGCA+AGG - Chr7:22532799-22532818 MsG0780037256.01.T01:intron 40.0%
TGTACCTACTCGTTTCCAAA+AGG - Chr7:22535245-22535264 MsG0780037256.01.T01:intron 40.0%
TGTGTGATGAGATATGTCGA+TGG - Chr7:22532744-22532763 MsG0780037256.01.T01:intron 40.0%
TTATAGAGATGATACCCACC+CGG + Chr7:22533408-22533427 None:intergenic 40.0%
TTGAGTAAATCCAGAGAGTG+TGG - Chr7:22533372-22533391 MsG0780037256.01.T01:intron 40.0%
TTGGCCATTATGAGCAAGTT+TGG + Chr7:22535153-22535172 None:intergenic 40.0%
! CCAACCAAACTTGCTCATAA+TGG - Chr7:22535146-22535165 MsG0780037256.01.T01:intron 40.0%
! GGTATAGCGGAAATACCATA+AGG + Chr7:22532655-22532674 None:intergenic 40.0%
! GTGGTAAAATTAAAGGGTGC+TGG + Chr7:22537050-22537069 None:intergenic 40.0%
! TGAGTAAATCCAGAGAGTGT+GGG - Chr7:22533373-22533392 MsG0780037256.01.T01:intron 40.0%
! TGTATTTTTCCCACACTCTC+TGG + Chr7:22533385-22533404 None:intergenic 40.0%
! TTATGGTGGGGTATGATTGT+CGG - Chr7:22532875-22532894 MsG0780037256.01.T01:intron 40.0%
! TTTTCTCGATGACTCTTCTG+AGG + Chr7:22535709-22535728 None:intergenic 40.0%
!! ACAGAATCAACTTTGGCTTG+TGG - Chr7:22532450-22532469 MsG0780037256.01.T01:CDS 40.0%
!! CATACCTTTTGGAAACGAGT+AGG + Chr7:22535252-22535271 None:intergenic 40.0%
!! GTAAAATTAAAGGGTGCTGG+TGG + Chr7:22537047-22537066 None:intergenic 40.0%
!! TTGCCTAAACGTTTAGGTTG+CGG - Chr7:22537270-22537289 MsG0780037256.01.T01:intron 40.0%
!! TTTGGGGTGTTGTCAAAACA+TGG + Chr7:22535591-22535610 None:intergenic 40.0%
!!! TAAACCCCCATGTTTTTGGA+AGG - Chr7:22534001-22534020 MsG0780037256.01.T01:intron 40.0%
AAGGCTCTCATCACATGAAG+AGG + Chr7:22536672-22536691 None:intergenic 45.0%
AATTGTTGGTCCCACGTGAA+AGG - Chr7:22533125-22533144 MsG0780037256.01.T01:CDS 45.0%
ACACATCGAAATTGGCACTG+AGG + Chr7:22534716-22534735 None:intergenic 45.0%
ACCAGTGTCTCCAACTGAAA+TGG - Chr7:22535659-22535678 MsG0780037256.01.T01:intron 45.0%
ACTTGTGAAGAACCTACGCA+TGG - Chr7:22537438-22537457 MsG0780037256.01.T01:CDS 45.0%
AGGAGCCTAAATATGAGGCA+AGG + Chr7:22534916-22534935 None:intergenic 45.0%
CAAGTGGAAGCAAGAGTCTT+AGG - Chr7:22536716-22536735 MsG0780037256.01.T01:intron 45.0%
CCAAAAACATGGGGGTTTAC+TGG + Chr7:22534000-22534019 None:intergenic 45.0%
CCTTCTGCACTCTTTATGCT+GGG + Chr7:22534330-22534349 None:intergenic 45.0%
CGTTCAATGCTGTGTTGTGT+TGG + Chr7:22533675-22533694 None:intergenic 45.0%
GACCATGGAGTGAGTGTATT+AGG - Chr7:22534681-22534700 MsG0780037256.01.T01:intron 45.0%
GAGAGCCTTCATAGTGTTGT+TGG - Chr7:22536683-22536702 MsG0780037256.01.T01:intron 45.0%
GAGTGTGGGAAAAATACACC+GGG - Chr7:22533387-22533406 MsG0780037256.01.T01:intron 45.0%
GATGAAAGAGCTTCTGCTTG+AGG - Chr7:22533051-22533070 MsG0780037256.01.T01:CDS 45.0%
TACTATGAGTACCCGTTGCA+CGG - Chr7:22533799-22533818 MsG0780037256.01.T01:intron 45.0%
TAGAATAGGAGTGGGTCTCA+CGG - Chr7:22533455-22533474 MsG0780037256.01.T01:intron 45.0%
TAGATAATAGAAGGGGGAGC+AGG - Chr7:22532900-22532919 MsG0780037256.01.T01:intron 45.0%
TCATCGAGAAAAAGGTCTCG+TGG - Chr7:22535717-22535736 MsG0780037256.01.T01:intron 45.0%
TCCACCTTCCAAAAACATGG+GGG + Chr7:22534008-22534027 None:intergenic 45.0%
TCCATTTCAGTTGGAGACAC+TGG + Chr7:22535663-22535682 None:intergenic 45.0%
TGAAAGAGCTTCTGCTTGAG+GGG - Chr7:22533053-22533072 MsG0780037256.01.T01:CDS 45.0%
TTATGGTGCAACTCCCATGT+TGG + Chr7:22532789-22532808 None:intergenic 45.0%
TTGGTTGGATTTGCCCTACA+TGG + Chr7:22535134-22535153 None:intergenic 45.0%
! AGCGGATTCAGAACAACACA+CGG - Chr7:22532697-22532716 MsG0780037256.01.T01:intron 45.0%
! AGGATAGTTTCCCTTTTGGC+TGG - Chr7:22533094-22533113 MsG0780037256.01.T01:CDS 45.0%
! ATCCAATGCAAAGAGCACAG+GGG - Chr7:22536758-22536777 MsG0780037256.01.T01:intron 45.0%
! CCAGTAAACCCCCATGTTTT+TGG - Chr7:22533997-22534016 MsG0780037256.01.T01:intron 45.0%
! GATCCAATGCAAAGAGCACA+GGG - Chr7:22536757-22536776 MsG0780037256.01.T01:intron 45.0%
! TGCGAGGATAGTTTCCCTTT+TGG - Chr7:22533090-22533109 MsG0780037256.01.T01:CDS 45.0%
! TGTGTGTAGAAGTGTGTGAG+AGG - Chr7:22533337-22533356 MsG0780037256.01.T01:CDS 45.0%
!! ACGTTTAGGTTGCGGATTTC+AGG - Chr7:22537278-22537297 MsG0780037256.01.T01:intron 45.0%
!! AGTTTTAACGTCCCGTGCAA+CGG + Chr7:22533814-22533833 None:intergenic 45.0%
!! CATTGGTTGGCATTGATGCA+GGG - Chr7:22532721-22532740 MsG0780037256.01.T01:intron 45.0%
!! CTGGTTGTCGGTTTAGACAA+CGG - Chr7:22533555-22533574 MsG0780037256.01.T01:intron 45.0%
!!! AACGGTCGTGGTTTTTTCTC+CGG - Chr7:22533573-22533592 MsG0780037256.01.T01:intron 45.0%
!!! CGTGGTTTTTTCTCCGGTTT+TGG - Chr7:22533579-22533598 MsG0780037256.01.T01:intron 45.0%
!!! CATTTATATAATTATTTTAA+AGG - Chr7:22535966-22535985 MsG0780037256.01.T01:intron 5.0%
!!! TACATTTTTTTTTAATATAT+TGG + Chr7:22535172-22535191 None:intergenic 5.0%
AACTCCCTGGAAGCCAACAT+GGG - Chr7:22532773-22532792 MsG0780037256.01.T01:intron 50.0%
ACTATGAGTACCCGTTGCAC+GGG - Chr7:22533800-22533819 MsG0780037256.01.T01:intron 50.0%
ACTTCAATGCTGCCATGCGT+AGG + Chr7:22537453-22537472 None:intergenic 50.0%
AGAATAGGAGTGGGTCTCAC+GGG - Chr7:22533456-22533475 MsG0780037256.01.T01:intron 50.0%
ATTCTCCCTCTCCAGCCAAA+AGG + Chr7:22533108-22533127 None:intergenic 50.0%
CAAGTGGTTGTGACCAAACC+AGG - Chr7:22536626-22536645 MsG0780037256.01.T01:intron 50.0%
GCCTTCTGCACTCTTTATGC+TGG + Chr7:22534331-22534350 None:intergenic 50.0%
GCGGATTCAGAACAACACAC+GGG - Chr7:22532698-22532717 MsG0780037256.01.T01:intron 50.0%
GGTCTCTACCTGAGCAATGA+TGG + Chr7:22536879-22536898 None:intergenic 50.0%
GGTGAGCATGATGAATTGCG+AGG - Chr7:22533074-22533093 MsG0780037256.01.T01:CDS 50.0%
GTGGGAAAAATACACCGGGT+GGG - Chr7:22533391-22533410 MsG0780037256.01.T01:intron 50.0%
TCAGAACAACACACGGGCAT+TGG - Chr7:22532704-22532723 MsG0780037256.01.T01:intron 50.0%
TCGAAAGTCCTCCTGACCAA+GGG - Chr7:22532973-22532992 MsG0780037256.01.T01:intron 50.0%
TGTGGGAAAAATACACCGGG+TGG - Chr7:22533390-22533409 MsG0780037256.01.T01:intron 50.0%
TTCTCCCTCTCCAGCCAAAA+GGG + Chr7:22533107-22533126 None:intergenic 50.0%
! CCCAGCATAAAGAGTGCAGA+AGG - Chr7:22534327-22534346 MsG0780037256.01.T01:CDS 50.0%
! CGACGCAAAAGCGTGGTTAA+AGG - Chr7:22537236-22537255 MsG0780037256.01.T01:intron 50.0%
! GGATCCAATGCAAAGAGCAC+AGG - Chr7:22536756-22536775 MsG0780037256.01.T01:intron 50.0%
! TCCAATGCAAAGAGCACAGG+GGG - Chr7:22536759-22536778 MsG0780037256.01.T01:intron 50.0%
! TTTTCAGAAACTGCTCCCCC+TGG + Chr7:22532554-22532573 None:intergenic 50.0%
!! AACAACACACGGGCATTGGT+TGG - Chr7:22532708-22532727 MsG0780037256.01.T01:intron 50.0%
!! AACTCCCATGTTGGCTTCCA+GGG + Chr7:22532780-22532799 None:intergenic 50.0%
!! AGTTTCCCTTTTGGCTGGAG+AGG - Chr7:22533099-22533118 MsG0780037256.01.T01:CDS 50.0%
!! GCATTGGTTGGCATTGATGC+AGG - Chr7:22532720-22532739 MsG0780037256.01.T01:intron 50.0%
!! GTGAAAGGTGCCAGCCAAAA+AGG - Chr7:22533140-22533159 MsG0780037256.01.T01:CDS 50.0%
!! GTGGTGTTGGTTTGAGACCA+TGG - Chr7:22534666-22534685 MsG0780037256.01.T01:intron 50.0%
!! GTTTCCCTTTTGGCTGGAGA+GGG - Chr7:22533100-22533119 MsG0780037256.01.T01:CDS 50.0%
!! GTTTTAACGTCCCGTGCAAC+GGG + Chr7:22533813-22533832 None:intergenic 50.0%
!!! ACCCCCATGTTTTTGGAAGG+TGG - Chr7:22534004-22534023 MsG0780037256.01.T01:intron 50.0%
ACCAGACTAAGCCGCCAAGT+GGG + Chr7:22534648-22534667 None:intergenic 55.0%
CGACGTGACCATCATTGCTC+AGG - Chr7:22536868-22536887 MsG0780037256.01.T01:intron 55.0%
GAACTCCCTGGAAGCCAACA+TGG - Chr7:22532772-22532791 MsG0780037256.01.T01:intron 55.0%
GGCTGGAGAGGGAGAATTGT+TGG - Chr7:22533111-22533130 MsG0780037256.01.T01:CDS 55.0%
GTACTGCCGTCTGCACTCAA+CGG + Chr7:22533016-22533035 None:intergenic 55.0%
GTCGAAAGTCCTCCTGACCA+AGG - Chr7:22532972-22532991 MsG0780037256.01.T01:intron 55.0%
GTTGCTGAGAGCTGTGTGAG+TGG + Chr7:22535490-22535509 None:intergenic 55.0%
TAGAAGGGGGAGCAGGAAAG+CGG - Chr7:22532907-22532926 MsG0780037256.01.T01:intron 55.0%
TAGGCAACGACGCAAAAGCG+TGG - Chr7:22537229-22537248 MsG0780037256.01.T01:intron 55.0%
TAGGTTGCGGATTTCAGGCG+TGG - Chr7:22537283-22537302 MsG0780037256.01.T01:intron 55.0%
TCGATGGCTGAAGAACTCCC+TGG - Chr7:22532760-22532779 MsG0780037256.01.T01:intron 55.0%
TTGGCTGGCACCTTTCACGT+GGG + Chr7:22533138-22533157 None:intergenic 55.0%
TTTGGCTGGCACCTTTCACG+TGG + Chr7:22533139-22533158 None:intergenic 55.0%
! GTCGGTTTAGACAACGGTCG+TGG - Chr7:22533561-22533580 MsG0780037256.01.T01:intron 55.0%
!! CAACTCCCATGTTGGCTTCC+AGG + Chr7:22532781-22532800 None:intergenic 55.0%
ACCCACTTGGCGGCTTAGTC+TGG - Chr7:22534644-22534663 MsG0780037256.01.T01:intron 60.0%
CACCAGACTAAGCCGCCAAG+TGG + Chr7:22534649-22534668 None:intergenic 60.0%
CACTTGGCGGCTTAGTCTGG+TGG - Chr7:22534647-22534666 MsG0780037256.01.T01:intron 60.0%
CCTGAACACCCTTGGTCAGG+AGG + Chr7:22532984-22533003 None:intergenic 60.0%
CGGGTTCCGTTGAGTGCAGA+CGG - Chr7:22533007-22533026 MsG0780037256.01.T01:CDS 60.0%
GCCCCCTGTGCTCTTTGCAT+TGG + Chr7:22536763-22536782 None:intergenic 60.0%
! GCGGCTTAGTCTGGTGGTGT+TGG - Chr7:22534653-22534672 MsG0780037256.01.T01:intron 60.0%
!! CCTCCTGACCAAGGGTGTTC+AGG - Chr7:22532981-22533000 MsG0780037256.01.T01:intron 60.0%
!! CCTGACCAAGGGTGTTCAGG+CGG - Chr7:22532984-22533003 MsG0780037256.01.T01:intron 60.0%
CCGCCTGAACACCCTTGGTC+AGG + Chr7:22532987-22533006 None:intergenic 65.0%
!! ACCAAGGGTGTTCAGGCGGC+GGG - Chr7:22532988-22533007 MsG0780037256.01.T01:intron 65.0%
!! GACCAAGGGTGTTCAGGCGG+CGG - Chr7:22532987-22533006 MsG0780037256.01.T01:intron 65.0%
ACCCGCCGCCTGAACACCCT+TGG + Chr7:22532992-22533011 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 22532404 22537486 22532404 ID=MsG0780037256.01;Name=MsG0780037256.01
Chr7 mRNA 22532404 22537486 22532404 ID=MsG0780037256.01.T01;Parent=MsG0780037256.01;Name=MsG0780037256.01.T01;_AED=0.17;_eAED=0.17;_QI=0|0|0|0.75|0.66|0.75|4|0|382
Chr7 exon 22537292 22537486 22537292 ID=MsG0780037256.01.T01:exon:22739;Parent=MsG0780037256.01.T01
Chr7 exon 22534051 22534554 22534051 ID=MsG0780037256.01.T01:exon:22740;Parent=MsG0780037256.01.T01
Chr7 exon 22533001 22533369 22533001 ID=MsG0780037256.01.T01:exon:22741;Parent=MsG0780037256.01.T01
Chr7 exon 22532404 22532484 22532404 ID=MsG0780037256.01.T01:exon:22742;Parent=MsG0780037256.01.T01
Chr7 CDS 22537292 22537486 22537292 ID=MsG0780037256.01.T01:cds;Parent=MsG0780037256.01.T01
Chr7 CDS 22534051 22534554 22534051 ID=MsG0780037256.01.T01:cds;Parent=MsG0780037256.01.T01
Chr7 CDS 22533001 22533369 22533001 ID=MsG0780037256.01.T01:cds;Parent=MsG0780037256.01.T01
Chr7 CDS 22532404 22532484 22532404 ID=MsG0780037256.01.T01:cds;Parent=MsG0780037256.01.T01
Gene Sequence

>MsG0780037256.01.T01

ATGTCTAATTCAAGTGCAATGAAATTTGACATAGAGAAGTTTGATGACAGAATCAACTTTGGCTTGTGGAAACTACAAGTCAAGGATGTGCGGATACAATCAAGATTACACAAGTATGGAATGTCTGGGCATTTAAAGAGAAATTGTCCAGGGGGAGCAGTTTCTGAAAAAGACTCTGAGGCAAGTGCTAGTAATAAATTTCTTTTTTTGCAGGAAATGAACGAATACAATTTAATTGCTGAGGAATGCAACCCGAATTTCCTTATAGATTTGGAAGAGCTTCTTTCACATGACATAGCTAATGTCTCCCAAGAACAAAACAATCAACAGTGTTTGACTTCAAGGTCCACTCACACAGCTCTCAGCAACACAATTGATCATAGCAACAAAATCAATGAAACCTTTTCACCAAAACTTTCTTCTAACTCATCTTTTCAGTTTCAAATTCCATGTTTTGACAACACCCCAAATTCATCCACTACAAATTCCTTACAATTTAGTGGATTTGAAAAATATGAACCAGTGTCTCCAACTGAAATGGAAAATATGAATCACTCAACTCAAACCTCAGAAGAGTCATCGAGAAAAAGGTCTCGTGGTAATCATGGTCATGATCATATCATGGCTGAGAGAAAGAGAAGAGAGAAACTCACAGAGAACTTCATTGCTCTTGCAGCTCTTATTCCTAACCTTAAAAAGGTGGACAAATCTTCTGTATTAGTTGAAGCTATCAAATACATGAAAGAGCTTAAAAAGCGTTTGGAAGTTTTGGAAGAACAAAATGAGAAAACAAAGATAGAGTCACAAGTGGTTGTGACCAAACCAGGCATTTATAGTGATGACAATTCCTCTTCATGTGATGAGAGCCTTCATAGTGTTGTTGGTTTACCATTTCAAGTGGAAGCAAGAGTCTTAGGGAAATATATGTTGATTCGGATCCAATGCAAAGAGCACAGGGGGCTTATAGTTAAAATTATGGTCGAAATTCAAAGGTTTCAACTATTTGTTGTTAATAGTAGTGTCTTACCTTTTGGAGATTCTATCATCGACGTGACCATCATTGCTCAGATGGATGAAGGCTACAACATGAACATAAAGGAACTTGTGAAGAACCTACGCATGGCAGCATTGAAGTTTACGTCATCATAA
Protein sequence

>MsG0780037256.01.T01

MSNSSAMKFDIEKFDDRINFGLWKLQVKDVRIQSRLHKYGMSGHLKRNCPGGAVSEKDSEASASNKFLFLQEMNEYNLIAEECNPNFLIDLEELLSHDIANVSQEQNNQQCLTSRSTHTALSNTIDHSNKINETFSPKLSSNSSFQFQIPCFDNTPNSSTTNSLQFSGFEKYEPVSPTEMENMNHSTQTSEESSRKRSRGNHGHDHIMAERKRREKLTENFIALAALIPNLKKVDKSSVLVEAIKYMKELKKRLEVLEEQNEKTKIESQVVVTKPGIYSDDNSSSCDESLHSVVGLPFQVEARVLGKYMLIRIQCKEHRGLIVKIMVEIQRFQLFVVNSSVLPFGDSIIDVTIIAQMDEGYNMNIKELVKNLRMAALKFTSS*