AlfalfaGEDB | MsG0780037348.01

M. sativa cultivar ZhongmuNo.1 / MsG0780037348.01

KEGG: -
GO: GO:0003677 GO:0046983
PFAM: PF00319

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037348.01.T01	PNY07866.1	64.417	163	58	0	1	163	1	163	6.81E-71	222

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037348.01.T01	Q4PSU4	40.645	155	87	2	13	162	64	218	1.15E-31	117

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037348.01.T01	A0A2K3NXV4	64.417	163	58	0	1	163	1	163	3.25e-71	222

TFs/TRs:

Gene ID	Type	Classification
MsG0780037348.01.T01	TF	MADS-M-type

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037348.01.T01	MTR_8g086290	61.350	163	63	0	1	163	1	163	2.49e-69	208
MsG0780037348.01.T01	MTR_2g105290	62.577	163	61	0	1	163	1	163	9.65e-69	206
MsG0780037348.01.T01	MTR_7g028448	61.350	163	55	2	1	163	1	155	1.05e-60	186
MsG0780037348.01.T01	MTR_4g036915	61.350	163	55	2	1	163	1	155	1.05e-60	186
MsG0780037348.01.T01	MTR_4g127140	61.272	173	57	2	1	163	1	173	2.37e-59	183
MsG0780037348.01.T01	MTR_1g106070	42.945	163	83	2	8	163	5	164	1.85e-41	137
MsG0780037348.01.T01	MTR_1g105910	43.558	163	82	2	8	163	5	164	1.37e-40	137
MsG0780037348.01.T01	MTR_2g030740	42.945	163	83	2	8	163	5	164	5.50e-40	135
MsG0780037348.01.T01	MTR_8g043650	42.331	163	84	2	8	163	5	164	6.75e-40	135
MsG0780037348.01.T01	MTR_3g052920	43.478	161	81	2	8	161	5	162	2.14e-39	134
MsG0780037348.01.T01	MTR_1g105920	41.317	167	86	3	8	167	5	166	1.83e-38	131
MsG0780037348.01.T01	MTR_1g012570	41.718	163	85	2	8	163	5	164	3.63e-37	128
MsG0780037348.01.T01	MTR_3g030770	42.138	159	82	2	8	159	5	160	1.26e-36	127
MsG0780037348.01.T01	MTR_2g093190	41.463	164	86	2	7	163	4	164	7.47e-36	124
MsG0780037348.01.T01	MTR_1g108510	40.881	159	84	2	8	159	5	160	1.81e-35	124
MsG0780037348.01.T01	MTR_3g080940	38.272	162	95	2	8	164	4	165	3.08e-35	122
MsG0780037348.01.T01	MTR_1g108580	39.241	158	86	2	13	163	10	164	1.97e-33	118
MsG0780037348.01.T01	MTR_5g045560	38.323	167	91	3	8	167	5	166	8.35e-33	117
MsG0780037348.01.T01	MTR_5g053390	40.000	160	92	2	8	163	5	164	3.02e-32	115
MsG0780037348.01.T01	MTR_1g105905	40.136	147	76	3	28	167	8	149	2.47e-31	113
MsG0780037348.01.T01	MTR_0121s0080	40.741	162	86	2	14	168	11	169	2.92e-31	113
MsG0780037348.01.T01	MTR_1g077360	38.650	163	90	2	8	163	5	164	8.19e-31	112
MsG0780037348.01.T01	MTR_1g075600	38.125	160	95	1	8	163	5	164	2.41e-30	110
MsG0780037348.01.T01	MTR_3g052870	43.846	130	61	3	8	128	5	131	3.06e-29	107
MsG0780037348.01.T01	MTR_2g085250	37.037	162	92	2	7	161	4	162	4.19e-29	107
MsG0780037348.01.T01	MTR_2g085280	37.037	162	92	2	7	161	4	162	4.66e-29	107
MsG0780037348.01.T01	MTR_0121s0100	42.188	128	64	2	8	128	5	129	8.59e-27	99.0
MsG0780037348.01.T01	MTR_7g062350	41.844	141	72	2	28	161	37	174	3.18e-26	100
MsG0780037348.01.T01	MTR_5g055100	35.928	167	89	4	8	163	5	164	4.54e-26	99.8
MsG0780037348.01.T01	MTR_8g022970	33.918	171	94	5	3	161	7	170	1.32e-21	87.0
MsG0780037348.01.T01	MTR_3g030780	52.055	73	35	0	8	80	5	77	1.60e-21	85.1
MsG0780037348.01.T01	MTR_3g109930	36.170	141	74	5	30	161	20	153	2.70e-21	85.9
MsG0780037348.01.T01	MTR_1g054265	52.174	69	33	0	13	81	3	71	3.88e-21	85.1
MsG0780037348.01.T01	MTR_8g079502	47.945	73	38	0	13	85	3	75	9.69e-21	84.7
MsG0780037348.01.T01	MTR_7g075870	42.478	113	57	2	12	119	2	111	1.72e-20	84.7
MsG0780037348.01.T01	MTR_8g046350	49.275	69	35	0	13	81	3	71	1.76e-20	83.6
MsG0780037348.01.T01	MTR_4g094638	48.684	76	39	0	13	88	3	78	2.33e-20	83.6
MsG0780037348.01.T01	MTR_1g063160	49.275	69	35	0	13	81	3	71	2.57e-20	83.6
MsG0780037348.01.T01	MTR_8g051580	49.275	69	35	0	13	81	3	71	4.52e-20	82.8
MsG0780037348.01.T01	MTR_3g437790	34.532	139	86	2	29	162	30	168	6.11e-20	82.4
MsG0780037348.01.T01	MTR_4g131030	33.962	159	95	4	13	165	3	157	6.45e-20	83.2
MsG0780037348.01.T01	MTR_1g047550	47.826	69	36	0	13	81	3	71	8.01e-20	82.0
MsG0780037348.01.T01	MTR_4g094632	50.000	70	35	0	13	82	3	72	1.14e-19	81.3
MsG0780037348.01.T01	MTR_7g075870	42.105	114	57	3	12	119	2	112	2.52e-19	81.6
MsG0780037348.01.T01	MTR_3g067875	65.306	49	17	0	28	76	8	56	4.58e-18	74.3
MsG0780037348.01.T01	MTR_3g113030	34.810	158	81	7	12	166	2	140	9.31e-17	75.1
MsG0780037348.01.T01	MTR_5g032150	50.000	68	34	0	12	79	2	69	1.23e-16	74.7
MsG0780037348.01.T01	MTR_5g032520	50.000	68	34	0	12	79	2	69	1.65e-16	74.3
MsG0780037348.01.T01	MTR_1g108500	64.706	51	18	0	28	78	113	163	1.77e-16	75.9
MsG0780037348.01.T01	MTR_5g066180	44.118	68	38	0	12	79	2	69	3.03e-16	73.6
MsG0780037348.01.T01	MTR_0003s0590	47.368	76	40	0	13	88	3	78	3.97e-16	73.9
MsG0780037348.01.T01	MTR_3g067870	50.000	66	33	0	19	84	83	148	4.21e-16	72.0
MsG0780037348.01.T01	MTR_8g033220	58.929	56	23	0	12	67	2	57	7.12e-16	72.8
MsG0780037348.01.T01	MTR_8g033220	58.929	56	23	0	12	67	2	57	7.67e-16	72.4
MsG0780037348.01.T01	MTR_1g038300	37.903	124	67	5	13	130	3	122	8.05e-16	72.8
MsG0780037348.01.T01	MTR_4g093970	53.125	64	30	0	13	76	29	92	8.82e-16	72.8
MsG0780037348.01.T01	MTR_6g464720	32.639	144	84	4	13	155	3	134	1.06e-15	72.8
MsG0780037348.01.T01	MTR_2g045020	33.333	162	91	6	5	161	19	168	1.25e-15	71.2
MsG0780037348.01.T01	MTR_5g066960	51.786	56	27	0	13	68	3	58	1.79e-15	67.4
MsG0780037348.01.T01	MTR_1g075570	37.069	116	63	2	28	143	8	113	4.86e-15	69.3
MsG0780037348.01.T01	MTR_3g005530	29.861	144	84	4	13	154	3	131	5.85e-15	70.1
MsG0780037348.01.T01	MTR_2g009890	46.269	67	36	0	13	79	3	69	5.93e-15	70.9
MsG0780037348.01.T01	MTR_3g102570	53.623	69	31	1	13	80	3	71	6.64e-15	71.2
MsG0780037348.01.T01	MTR_4g084740	49.275	69	34	1	13	80	3	71	1.06e-14	70.9
MsG0780037348.01.T01	MTR_5g021270	37.838	148	69	8	13	153	3	134	1.19e-14	69.3
MsG0780037348.01.T01	MTR_5g021270	37.838	148	69	8	13	153	3	134	1.34e-14	69.3
MsG0780037348.01.T01	MTR_7g016630	47.059	68	35	1	13	79	3	70	1.50e-14	69.7
MsG0780037348.01.T01	MTR_7g016600	32.414	145	80	5	13	153	3	133	2.04e-14	69.3
MsG0780037348.01.T01	MTR_5g031000	44.776	67	37	0	13	79	3	69	2.09e-14	68.9
MsG0780037348.01.T01	MTR_5g031000	44.776	67	37	0	13	79	3	69	2.35e-14	68.9
MsG0780037348.01.T01	MTR_3g452380	32.520	123	71	3	7	127	12	124	2.53e-14	68.9
MsG0780037348.01.T01	MTR_4g102530	47.059	68	36	0	12	79	2	69	2.73e-14	68.2
MsG0780037348.01.T01	MTR_1g029670	44.444	63	35	0	13	75	3	65	3.12e-14	67.4
MsG0780037348.01.T01	MTR_1g053070	46.269	67	36	0	13	79	3	69	3.65e-14	68.6
MsG0780037348.01.T01	MTR_3g088615	44.444	63	35	0	13	75	3	65	4.48e-14	67.0
MsG0780037348.01.T01	MTR_8g033270	44.776	67	37	0	13	79	3	69	5.22e-14	68.2
MsG0780037348.01.T01	MTR_2g017865	27.950	161	99	3	13	169	18	165	5.88e-14	68.2
MsG0780037348.01.T01	MTR_4g093030	56.604	53	23	0	13	65	3	55	7.09e-14	66.2
MsG0780037348.01.T01	MTR_8g066260	46.875	64	31	1	13	76	3	63	9.16e-14	67.4
MsG0780037348.01.T01	MTR_6g015975	31.724	145	81	5	13	153	3	133	1.07e-13	67.0
MsG0780037348.01.T01	MTR_4g109830	44.118	68	37	1	13	79	3	70	1.19e-13	67.0
MsG0780037348.01.T01	MTR_2g461710	52.830	53	25	0	13	65	3	55	1.59e-13	62.4
MsG0780037348.01.T01	MTR_8g087860	29.448	163	94	5	13	169	19	166	1.82e-13	66.6
MsG0780037348.01.T01	MTR_5g046790	42.029	69	37	1	13	81	3	68	2.02e-13	65.9
MsG0780037348.01.T01	MTR_4g109810	31.250	144	81	5	13	154	3	130	2.90e-13	65.9
MsG0780037348.01.T01	MTR_3g067910	50.943	53	26	0	28	80	6	58	4.06e-13	62.8
MsG0780037348.01.T01	MTR_4g036050	40.506	79	44	2	13	88	3	81	6.24e-13	64.3
MsG0780037348.01.T01	MTR_4g036050	40.506	79	44	2	13	88	3	81	6.92e-13	63.9
MsG0780037348.01.T01	MTR_4g036050	40.506	79	44	2	13	88	3	81	6.99e-13	63.5
MsG0780037348.01.T01	MTR_4g036050	40.506	79	44	2	13	88	3	81	7.31e-13	64.3
MsG0780037348.01.T01	MTR_5g046870	43.077	65	35	1	13	75	3	67	2.48e-12	60.8
MsG0780037348.01.T01	MTR_1g101970	40.299	67	40	0	13	79	3	69	3.86e-12	62.0
MsG0780037348.01.T01	MTR_3g084980	49.091	55	28	0	13	67	3	57	5.96e-12	62.4
MsG0780037348.01.T01	MTR_8g097090	47.273	55	29	0	13	67	3	57	1.28e-11	61.2
MsG0780037348.01.T01	MTR_7g075850	48.214	56	29	0	13	68	3	58	3.46e-11	60.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0780037348.01.T01	AT2G24840	40.645	155	87	2	13	162	64	218	1.18e-32	117
MsG0780037348.01.T01	AT5G60440	35.928	167	90	3	7	161	2	163	1.79e-30	112
MsG0780037348.01.T01	AT1G65360	34.375	160	100	3	8	163	3	161	2.45e-22	89.7
MsG0780037348.01.T01	AT3G66656	41.176	136	69	3	13	139	3	136	4.95e-22	87.8
MsG0780037348.01.T01	AT2G45660	36.691	139	75	3	12	150	2	127	1.12e-21	86.3
MsG0780037348.01.T01	AT2G34440	50.725	69	34	0	13	81	3	71	5.69e-21	85.1
MsG0780037348.01.T01	AT2G45660	38.129	139	73	4	12	150	2	127	7.79e-21	85.5
MsG0780037348.01.T01	AT3G54340	36.646	161	82	5	12	170	2	144	9.81e-21	85.9
MsG0780037348.01.T01	AT1G01530	52.113	71	34	0	7	77	2	72	9.83e-20	83.6
MsG0780037348.01.T01	AT5G51870	36.196	163	86	4	12	169	2	151	1.73e-19	82.0
MsG0780037348.01.T01	AT5G51870	35.366	164	92	3	8	170	21	171	4.03e-19	80.9
MsG0780037348.01.T01	AT5G51870	36.196	163	86	4	12	169	2	151	4.26e-19	81.3
MsG0780037348.01.T01	AT5G51870	35.185	162	89	3	12	169	12	161	4.36e-19	81.3
MsG0780037348.01.T01	AT1G72350	30.380	158	81	2	13	170	44	172	4.48e-19	81.3
MsG0780037348.01.T01	AT5G51860	34.177	158	88	5	12	165	2	147	4.64e-19	80.9
MsG0780037348.01.T01	AT5G51870	35.625	160	89	3	12	170	2	148	4.71e-19	80.1
MsG0780037348.01.T01	AT5G51860	34.177	158	88	5	12	165	2	147	4.82e-19	80.9
MsG0780037348.01.T01	AT4G22950	32.639	144	83	3	12	155	2	131	1.02e-18	79.0
MsG0780037348.01.T01	AT4G36590	52.239	67	32	0	13	79	8	74	1.24e-18	80.5
MsG0780037348.01.T01	AT5G62165	35.119	168	80	5	12	169	2	150	3.12e-18	77.4
MsG0780037348.01.T01	AT5G62165	35.119	168	80	5	12	169	2	150	3.12e-18	77.4
MsG0780037348.01.T01	AT5G62165	35.119	168	80	5	12	169	2	150	3.12e-18	77.4
MsG0780037348.01.T01	AT3G57230	32.215	149	87	3	13	161	3	137	3.14e-18	77.0
MsG0780037348.01.T01	AT5G62165	35.088	171	81	6	12	171	2	153	4.36e-18	77.0
MsG0780037348.01.T01	AT5G62165	35.088	171	81	6	12	171	2	153	4.36e-18	77.0
MsG0780037348.01.T01	AT5G62165	35.088	171	81	6	12	171	2	153	4.36e-18	77.0
MsG0780037348.01.T01	AT5G62165	35.088	171	81	6	12	171	2	153	4.36e-18	77.0
MsG0780037348.01.T01	AT5G62165	35.088	171	81	6	12	171	2	153	4.36e-18	77.0
MsG0780037348.01.T01	AT4G22950	32.639	144	83	3	12	155	2	131	4.36e-18	78.6
MsG0780037348.01.T01	AT4G22950	32.639	144	83	3	12	155	2	131	4.36e-18	78.6
MsG0780037348.01.T01	AT5G62165	50.000	76	38	0	12	87	2	77	5.10e-18	75.5
MsG0780037348.01.T01	AT5G62165	35.119	168	80	5	12	169	2	150	1.15e-17	77.4
MsG0780037348.01.T01	AT5G62165	35.119	168	80	5	12	169	2	150	1.15e-17	77.4
MsG0780037348.01.T01	AT5G62165	35.119	168	80	5	12	169	2	150	1.15e-17	77.4
MsG0780037348.01.T01	AT5G62165	49.351	77	39	0	12	88	2	78	1.92e-17	76.3
MsG0780037348.01.T01	AT5G62165	49.351	77	39	0	12	88	2	78	1.92e-17	76.3
MsG0780037348.01.T01	AT2G22540	51.471	68	33	0	12	79	2	69	3.00e-17	76.6
MsG0780037348.01.T01	AT2G22540	51.471	68	33	0	12	79	2	69	3.00e-17	76.6
MsG0780037348.01.T01	AT3G57230	32.394	142	82	3	13	154	3	130	3.44e-17	76.6
MsG0780037348.01.T01	AT3G57230	32.394	142	82	3	13	154	3	130	3.44e-17	76.6
MsG0780037348.01.T01	AT4G24540	35.252	139	77	3	12	150	2	127	3.59e-17	76.3
MsG0780037348.01.T01	AT3G04100	30.270	185	110	8	1	170	1	181	3.95e-17	75.9
MsG0780037348.01.T01	AT2G22540	59.259	54	22	0	12	65	2	55	1.81e-16	74.3
MsG0780037348.01.T01	AT4G11880	32.414	145	83	4	12	155	2	132	1.83e-16	73.6
MsG0780037348.01.T01	AT4G11880	32.414	145	83	4	12	155	2	132	1.83e-16	73.6
MsG0780037348.01.T01	AT4G37940	45.205	73	40	0	13	85	3	75	1.85e-16	73.9
MsG0780037348.01.T01	AT4G37940	45.205	73	40	0	13	85	3	75	2.03e-16	74.3
MsG0780037348.01.T01	AT4G09960	30.556	144	83	4	13	154	3	131	4.30e-16	73.2
MsG0780037348.01.T01	AT4G11880	33.562	146	80	5	12	155	2	132	4.38e-16	73.2
MsG0780037348.01.T01	AT4G11880	33.562	146	80	5	12	155	2	132	4.38e-16	73.2
MsG0780037348.01.T01	AT4G37940	45.205	73	40	0	13	85	3	75	4.64e-16	72.4
MsG0780037348.01.T01	AT4G09960	30.556	144	83	4	13	154	3	131	5.36e-16	73.2
MsG0780037348.01.T01	AT4G09960	30.556	144	83	4	13	154	4	132	5.38e-16	73.2
MsG0780037348.01.T01	AT5G13790	32.500	160	71	3	13	167	3	130	6.12e-16	73.6
MsG0780037348.01.T01	AT4G09960	30.556	144	83	4	13	154	13	141	6.46e-16	73.2
MsG0780037348.01.T01	AT5G13790	52.239	67	32	0	13	79	3	69	7.03e-16	73.6
MsG0780037348.01.T01	AT4G09960	30.556	144	83	4	13	154	29	157	1.15e-15	72.8
MsG0780037348.01.T01	AT1G77950	47.826	69	35	1	13	80	3	71	1.84e-15	72.0
MsG0780037348.01.T01	AT1G77950	47.826	69	35	1	13	80	3	71	1.84e-15	72.0
MsG0780037348.01.T01	AT1G77950	47.826	69	35	1	13	80	3	71	1.84e-15	72.0
MsG0780037348.01.T01	AT1G77950	47.826	69	35	1	13	80	3	71	1.84e-15	72.0
MsG0780037348.01.T01	AT2G42830	31.544	149	81	5	6	150	11	142	2.20e-15	71.6
MsG0780037348.01.T01	AT2G42830	31.544	149	81	5	6	150	11	142	2.35e-15	71.6
MsG0780037348.01.T01	AT5G23260	46.667	75	38	1	8	80	14	88	2.84e-15	71.6
MsG0780037348.01.T01	AT5G23260	46.667	75	38	1	8	80	14	88	2.94e-15	71.6
MsG0780037348.01.T01	AT1G28460	32.143	168	97	5	8	163	4	166	3.10e-15	70.1
MsG0780037348.01.T01	AT1G77980	47.826	69	35	1	13	80	3	71	3.21e-15	72.4
MsG0780037348.01.T01	AT5G23260	48.571	70	34	1	13	80	3	72	4.22e-15	70.9
MsG0780037348.01.T01	AT5G23260	48.571	70	34	1	13	80	3	72	4.56e-15	70.9
MsG0780037348.01.T01	AT1G71692	45.205	73	39	1	12	83	2	74	6.26e-15	70.1
MsG0780037348.01.T01	AT1G22130	47.826	69	35	1	13	80	3	71	8.20e-15	71.2
MsG0780037348.01.T01	AT3G30260	37.864	103	59	3	13	114	3	101	1.01e-14	70.1
MsG0780037348.01.T01	AT4G09960	30.556	144	83	4	13	154	98	226	1.09e-14	70.9
MsG0780037348.01.T01	AT3G57390	46.269	67	36	0	13	79	3	69	1.20e-14	69.3
MsG0780037348.01.T01	AT5G10140	38.017	121	64	5	13	129	3	116	1.28e-14	68.2
MsG0780037348.01.T01	AT2G22630	44.776	67	37	0	13	79	3	69	1.93e-14	68.9
MsG0780037348.01.T01	AT2G22630	44.776	67	37	0	13	79	3	69	1.93e-14	68.9
MsG0780037348.01.T01	AT5G10140	38.017	121	64	5	13	129	3	116	2.35e-14	67.8
MsG0780037348.01.T01	AT1G29962	29.825	171	100	6	8	163	4	169	2.54e-14	67.8
MsG0780037348.01.T01	AT5G10140	38.017	121	64	5	13	129	3	116	2.56e-14	67.8
MsG0780037348.01.T01	AT5G10140	38.017	121	64	5	13	129	3	116	2.68e-14	68.2
MsG0780037348.01.T01	AT3G58780	31.690	142	76	5	13	150	24	148	2.86e-14	68.9
MsG0780037348.01.T01	AT3G57390	46.269	67	36	0	13	79	3	69	2.90e-14	68.9
MsG0780037348.01.T01	AT3G58780	31.690	142	76	5	13	150	18	142	3.24e-14	68.6
MsG0780037348.01.T01	AT3G58780	31.690	142	76	5	13	150	18	142	3.55e-14	68.9
MsG0780037348.01.T01	AT5G65050	37.838	111	60	3	13	121	3	106	4.27e-14	67.0
MsG0780037348.01.T01	AT5G65050	37.838	111	60	3	13	121	3	106	6.08e-14	66.6
MsG0780037348.01.T01	AT2G14210	44.118	68	37	1	13	79	3	70	6.62e-14	67.8
MsG0780037348.01.T01	AT5G65050	37.838	111	60	3	13	121	3	106	7.19e-14	67.0
MsG0780037348.01.T01	AT2G45650	43.284	67	38	0	13	79	3	69	7.81e-14	67.8
MsG0780037348.01.T01	AT4G18960	46.575	73	31	1	13	85	19	83	8.56e-14	67.4
MsG0780037348.01.T01	AT2G14210	44.118	68	37	1	13	79	3	70	9.30e-14	67.4
MsG0780037348.01.T01	AT3G61120	42.029	69	40	0	13	81	3	71	1.21e-13	67.0
MsG0780037348.01.T01	AT1G47760	45.312	64	35	0	13	76	3	66	1.42e-13	65.9
MsG0780037348.01.T01	AT1G69120	45.312	64	32	1	13	76	3	63	1.44e-13	66.6
MsG0780037348.01.T01	AT1G69120	45.312	64	32	1	13	76	3	63	2.56e-13	66.2
MsG0780037348.01.T01	AT1G28450	30.000	170	101	5	8	163	4	169	2.74e-13	65.1
MsG0780037348.01.T01	AT1G26310	45.588	68	36	1	13	79	3	70	2.77e-13	66.2
MsG0780037348.01.T01	AT4G37435	54.545	55	25	0	13	67	3	57	3.73e-13	64.7
MsG0780037348.01.T01	AT5G60910	46.875	64	31	1	13	76	3	63	4.04e-13	65.5
MsG0780037348.01.T01	AT3G02310	33.108	148	87	6	13	158	3	140	5.51e-13	64.7
MsG0780037348.01.T01	AT5G65070	34.167	120	70	4	13	129	3	116	5.85e-13	63.5
MsG0780037348.01.T01	AT5G65050	42.308	78	43	2	13	88	3	80	1.05e-12	63.5
MsG0780037348.01.T01	AT5G49420	28.834	163	87	6	8	164	3	142	1.07e-12	65.1
MsG0780037348.01.T01	AT1G46408	29.560	159	63	5	12	164	4	119	1.15e-12	64.7
MsG0780037348.01.T01	AT3G58780	31.884	138	70	5	13	148	18	133	1.19e-12	64.3
MsG0780037348.01.T01	AT3G02310	32.450	151	84	6	13	158	3	140	1.38e-12	64.3
MsG0780037348.01.T01	AT1G17310	30.070	143	68	4	25	167	61	171	1.45e-12	63.5
MsG0780037348.01.T01	AT5G15800	31.126	151	86	6	13	158	3	140	1.67e-12	63.9
MsG0780037348.01.T01	AT1G17310	30.070	143	68	4	25	167	72	182	1.83e-12	63.5
MsG0780037348.01.T01	AT5G65070	34.167	120	70	4	13	129	3	116	2.03e-12	63.2
MsG0780037348.01.T01	AT5G20240	35.593	118	67	4	13	125	3	116	2.37e-12	62.0
MsG0780037348.01.T01	AT5G65060	35.135	111	63	3	13	121	3	106	2.57e-12	62.8
MsG0780037348.01.T01	AT3G58780	48.214	56	29	0	13	68	18	73	2.74e-12	63.5
MsG0780037348.01.T01	AT5G15800	31.757	148	89	6	13	158	3	140	2.79e-12	63.5
MsG0780037348.01.T01	AT5G65060	35.135	111	63	3	13	121	3	106	3.52e-12	62.4
MsG0780037348.01.T01	AT5G49490	27.647	170	96	5	1	164	34	182	4.90e-12	63.2
MsG0780037348.01.T01	AT5G20240	35.593	118	67	4	13	125	3	116	5.33e-12	62.0
MsG0780037348.01.T01	AT5G38620	30.380	158	83	6	13	164	6	142	6.36e-12	63.2
MsG0780037348.01.T01	AT2G03710	47.273	55	29	0	13	67	3	57	9.90e-12	60.8
MsG0780037348.01.T01	AT1G24260	47.273	55	29	0	13	67	3	57	1.15e-11	61.6
MsG0780037348.01.T01	AT1G24260	47.273	55	29	0	13	67	3	57	1.16e-11	61.6
MsG0780037348.01.T01	AT1G24260	47.273	55	29	0	13	67	3	57	1.18e-11	61.6
MsG0780037348.01.T01	AT5G65060	38.462	78	46	2	13	88	3	80	1.35e-11	60.5
MsG0780037348.01.T01	AT2G03710	47.273	55	29	0	13	67	3	57	1.46e-11	61.6
MsG0780037348.01.T01	AT2G03710	47.273	55	29	0	13	67	3	57	1.46e-11	61.6
MsG0780037348.01.T01	AT5G04640	31.298	131	73	4	12	130	4	129	2.16e-11	61.6
MsG0780037348.01.T01	AT1G31140	33.333	108	64	2	18	125	8	107	2.55e-11	60.5
MsG0780037348.01.T01	AT5G65070	40.000	60	36	0	13	72	3	62	3.05e-11	60.5
MsG0780037348.01.T01	AT5G65070	40.000	60	36	0	13	72	3	62	3.94e-11	59.7
MsG0780037348.01.T01	AT5G65070	42.857	56	32	0	13	68	3	58	5.47e-11	59.7
MsG0780037348.01.T01	AT1G31140	45.455	66	34	1	18	81	8	73	5.83e-11	59.3

Find 28 sgRNAs with CRISPR-Local

Find 31 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCAATATTCATCTGGTCAAT+AGG	0.294406	7:-24057135	None:intergenic
TGAATTCTATTAATGAGTTA+AGG	0.372755	7:+24057175	MsG0780037348.01.T01:CDS
CAATATTCATCTGGTCAATA+GGG	0.401131	7:-24057134	None:intergenic
GCACTGTGTATTTCTTCGTT+TGG	0.402429	7:-24056738	None:intergenic
GAAGTTGTTCAATATTCATC+TGG	0.405722	7:-24057143	None:intergenic
TTGAGAACAGTATCGGTGTT+TGG	0.412356	7:-24056931	None:intergenic
AAGCAAAATAGTTTGTTACT+AGG	0.447260	7:-24056901	None:intergenic
TGAGGAGGCAACAAAATTGT+TGG	0.456108	7:+24057038	MsG0780037348.01.T01:CDS
GAATTATATTATGCTTCACT+AGG	0.481064	7:+24057210	MsG0780037348.01.T01:CDS
TGGGTAAAGATTGCAAATCA+AGG	0.483499	7:+24057097	MsG0780037348.01.T01:CDS
TAAGGATCAGATCTTCCTAC+TGG	0.485833	7:-24056994	None:intergenic
CGACGATTATGCTCTTCATA+AGG	0.496944	7:-24057012	None:intergenic
GGCAACAAAATTGTTGGAGA+TGG	0.500816	7:+24057044	MsG0780037348.01.T01:CDS
CGTTTGGTTTGAATTATCCA+TGG	0.503093	7:-24056722	None:intergenic
CAAAGGAACAACCGAGTTTG+AGG	0.505075	7:+24056963	MsG0780037348.01.T01:CDS
GGGTAAAGATTGCAAATCAA+GGG	0.516146	7:+24057098	MsG0780037348.01.T01:CDS
ATTGCAAATCAAGGGATTGG+TGG	0.525645	7:+24057106	MsG0780037348.01.T01:CDS
AAGATTGCAAATCAAGGGAT+TGG	0.542464	7:+24057103	MsG0780037348.01.T01:CDS
AGAGCATAATCGTCGATATG+AGG	0.545303	7:+24057020	MsG0780037348.01.T01:CDS
TGGAATTTCAGCCTCAAACT+CGG	0.561344	7:-24056974	None:intergenic
ATTCTATTAATGAGTTAAGG+AGG	0.570485	7:+24057178	MsG0780037348.01.T01:CDS
ACTAGGAGAAAACACAATGA+TGG	0.570897	7:-24056884	None:intergenic
GTTCTCAATAGCTACATCAA+AGG	0.583744	7:+24056946	MsG0780037348.01.T01:CDS
AATTATATTATGCTTCACTA+GGG	0.607441	7:+24057211	MsG0780037348.01.T01:CDS
GTAGCTATTGAGAACAGTAT+CGG	0.611701	7:-24056938	None:intergenic
TAATGAGTTAAGGAGGAATG+TGG	0.629736	7:+24057185	MsG0780037348.01.T01:CDS
TTTGAGGCTGAAATTCCAGT+AGG	0.634387	7:+24056979	MsG0780037348.01.T01:CDS
GCATAATCGTCGATATGAGG+AGG	0.657346	7:+24057023	MsG0780037348.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ACTAGAAGATATTAAAAATT+TGG	+	Chr7:24057077-24057096	MsG0780037348.01.T01:CDS	15.0%
!!	CTAGAAGATATTAAAAATTT+GGG	+	Chr7:24057078-24057097	MsG0780037348.01.T01:CDS	15.0%
!!	AATTATATTATGCTTCACTA+GGG	+	Chr7:24057211-24057230	MsG0780037348.01.T01:CDS	20.0%
!!	TGAATTCTATTAATGAGTTA+AGG	+	Chr7:24057175-24057194	MsG0780037348.01.T01:CDS	20.0%
!	ATTCTATTAATGAGTTAAGG+AGG	+	Chr7:24057178-24057197	MsG0780037348.01.T01:CDS	25.0%
!	GAATTATATTATGCTTCACT+AGG	+	Chr7:24057210-24057229	MsG0780037348.01.T01:CDS	25.0%
!!	AGTAACAAACTATTTTGCTT+TGG	+	Chr7:24056904-24056923	MsG0780037348.01.T01:CDS	25.0%
!!!	AAGCAAAATAGTTTGTTACT+AGG	-	Chr7:24056904-24056923	None:intergenic	25.0%
	CAATATTCATCTGGTCAATA+GGG	-	Chr7:24057137-24057156	None:intergenic	30.0%
	GAAGTTGTTCAATATTCATC+TGG	-	Chr7:24057146-24057165	None:intergenic	30.0%
	TCAATATTCATCTGGTCAAT+AGG	-	Chr7:24057138-24057157	None:intergenic	30.0%
	AAGATTGCAAATCAAGGGAT+TGG	+	Chr7:24057103-24057122	MsG0780037348.01.T01:CDS	35.0%
	ACTAGGAGAAAACACAATGA+TGG	-	Chr7:24056887-24056906	None:intergenic	35.0%
	GGGTAAAGATTGCAAATCAA+GGG	+	Chr7:24057098-24057117	MsG0780037348.01.T01:CDS	35.0%
	GTAGCTATTGAGAACAGTAT+CGG	-	Chr7:24056941-24056960	None:intergenic	35.0%
	GTTCTCAATAGCTACATCAA+AGG	+	Chr7:24056946-24056965	MsG0780037348.01.T01:CDS	35.0%
	TAATGAGTTAAGGAGGAATG+TGG	+	Chr7:24057185-24057204	MsG0780037348.01.T01:CDS	35.0%
	TGGGTAAAGATTGCAAATCA+AGG	+	Chr7:24057097-24057116	MsG0780037348.01.T01:CDS	35.0%
!	ACGTTTTCAAAAAGACGTGT+AGG	+	Chr7:24056811-24056830	MsG0780037348.01.T01:CDS	35.0%
	AGAGCATAATCGTCGATATG+AGG	+	Chr7:24057020-24057039	MsG0780037348.01.T01:CDS	40.0%
	ATTGCAAATCAAGGGATTGG+TGG	+	Chr7:24057106-24057125	MsG0780037348.01.T01:CDS	40.0%
	CGACGATTATGCTCTTCATA+AGG	-	Chr7:24057015-24057034	None:intergenic	40.0%
	GCACTGTGTATTTCTTCGTT+TGG	-	Chr7:24056741-24056760	None:intergenic	40.0%
	GGCAACAAAATTGTTGGAGA+TGG	+	Chr7:24057044-24057063	MsG0780037348.01.T01:CDS	40.0%
	TAAGGATCAGATCTTCCTAC+TGG	-	Chr7:24056997-24057016	None:intergenic	40.0%
	TGAGGAGGCAACAAAATTGT+TGG	+	Chr7:24057038-24057057	MsG0780037348.01.T01:CDS	40.0%
	TGGAATTTCAGCCTCAAACT+CGG	-	Chr7:24056977-24056996	None:intergenic	40.0%
!	TTTGAGGCTGAAATTCCAGT+AGG	+	Chr7:24056979-24056998	MsG0780037348.01.T01:CDS	40.0%
!!	TTGAGAACAGTATCGGTGTT+TGG	-	Chr7:24056934-24056953	None:intergenic	40.0%
	CAAAGGAACAACCGAGTTTG+AGG	+	Chr7:24056963-24056982	MsG0780037348.01.T01:CDS	45.0%
	GCATAATCGTCGATATGAGG+AGG	+	Chr7:24057023-24057042	MsG0780037348.01.T01:CDS	45.0%

Chromosome	Type	Strat	End	Strand	Name
Chr7	gene	24056724	24057248	24056724	ID=MsG0780037348.01;Name=MsG0780037348.01
Chr7	mRNA	24056724	24057248	24056724	ID=MsG0780037348.01.T01;Parent=MsG0780037348.01;Name=MsG0780037348.01.T01;_AED=0.00;_eAED=0.00;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|174
Chr7	exon	24056724	24057248	24056724	ID=MsG0780037348.01.T01:exon:6445;Parent=MsG0780037348.01.T01
Chr7	CDS	24056724	24057248	24056724	ID=MsG0780037348.01.T01:cds;Parent=MsG0780037348.01.T01

Gene Sequence

>MsG0780037348.01.T01

ATGGATAATTCAAACCAAACGAAGAAATACACAGTGCGCAAGAAGATTCAGATCAAGAAGCTAGAGAAGAACACGAGCAAGCAAGTCACGTTTTCAAAAAGACGTGTAGGTTTGTTCAAAAAAGCAAGTGAACTTTGTGTCTTATGCAATGTTCAAGCATCCATCATTGTGTTTTCTCCTAGTAACAAACTATTTTGCTTTGGTCAACCAAACACCGATACTGTTCTCAATAGCTACATCAAAGGAACAACCGAGTTTGAGGCTGAAATTCCAGTAGGAAGATCTGATCCTTATGAAGAGCATAATCGTCGATATGAGGAGGCAACAAAATTGTTGGAGATGGAAAAGAAGAAACTAGAAGATATTAAAAATTTGGGTAAAGATTGCAAATCAAGGGATTGGTGGAATGACCCTATTGACCAGATGAATATTGAACAACTTCAAGAATTTATGAATTCTATTAATGAGTTAAGGAGGAATGTGGCTGAATTATATTATGCTTCACTAGGGATGACGAAATTATGA

Protein sequence

>MsG0780037348.01.T01

MDNSNQTKKYTVRKKIQIKKLEKNTSKQVTFSKRRVGLFKKASELCVLCNVQASIIVFSPSNKLFCFGQPNTDTVLNSYIKGTTEFEAEIPVGRSDPYEEHNRRYEEATKLLEMEKKKLEDIKNLGKDCKSRDWWNDPIDQMNIEQLQEFMNSINELRRNVAELYYASLGMTKL*