AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037814.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037814.01.T01 MTR_5g078140 72.973 148 37 1 9 153 1 148 8.31e-75 231
MsG0780037814.01.T01 MTR_3g065440 58.571 210 66 4 9 202 1 205 1.29e-73 228
MsG0780037814.01.T01 MTR_4g102380 74.242 132 34 0 9 140 1 132 8.72e-70 217
MsG0780037814.01.T01 MTR_7g076740 69.231 130 39 1 9 137 1 130 4.47e-63 201
MsG0780037814.01.T01 MTR_8g031360 70.992 131 36 2 9 137 1 131 3.30e-62 198
MsG0780037814.01.T01 MTR_4g478180 58.857 175 61 3 9 176 2 172 8.20e-62 199
MsG0780037814.01.T01 MTR_7g011170 61.806 144 55 0 9 152 1 144 3.08e-61 196
MsG0780037814.01.T01 MTR_6g012690 67.969 128 41 0 9 136 1 128 5.15e-61 197
MsG0780037814.01.T01 MTR_3g074520 66.406 128 43 0 9 136 1 128 5.64e-60 194
MsG0780037814.01.T01 MTR_1g085040 55.357 168 72 2 9 176 1 165 1.79e-59 194
MsG0780037814.01.T01 MTR_4g073420 52.601 173 75 1 9 181 1 166 2.44e-59 191
MsG0780037814.01.T01 MTR_4g091490 66.667 129 42 1 9 136 1 129 1.14e-58 191
MsG0780037814.01.T01 MTR_4g082290 66.406 128 43 0 9 136 1 128 1.16e-58 192
MsG0780037814.01.T01 MTR_5g029840 65.625 128 44 0 9 136 1 128 4.52e-58 189
MsG0780037814.01.T01 MTR_2g011660 65.891 129 43 1 9 136 1 129 6.47e-58 189
MsG0780037814.01.T01 MTR_3g461490 63.566 129 47 0 9 137 1 129 7.05e-58 188
MsG0780037814.01.T01 MTR_7g110830 43.478 230 123 3 9 238 1 223 1.09e-57 189
MsG0780037814.01.T01 MTR_2g089620 66.406 128 43 0 9 136 1 128 1.51e-57 187
MsG0780037814.01.T01 MTR_3g097450 65.116 129 45 0 9 137 1 129 2.09e-57 186
MsG0780037814.01.T01 MTR_8g095390 62.308 130 49 0 9 138 1 130 1.83e-56 184
MsG0780037814.01.T01 MTR_4g105130 49.727 183 83 1 9 191 1 174 2.66e-56 185
MsG0780037814.01.T01 MTR_6g009430 61.832 131 50 0 9 139 1 131 4.48e-56 184
MsG0780037814.01.T01 MTR_1g100653 42.969 256 112 5 9 261 1 225 7.29e-56 182
MsG0780037814.01.T01 MTR_4g082230 64.062 128 46 0 9 136 1 128 8.87e-56 185
MsG0780037814.01.T01 MTR_1g085640 43.830 235 113 5 9 224 1 235 1.09e-55 184
MsG0780037814.01.T01 MTR_3g077110 61.765 136 52 0 9 144 1 136 1.35e-55 183
MsG0780037814.01.T01 MTR_1g112760 64.567 127 45 0 11 137 4 130 2.34e-55 179
MsG0780037814.01.T01 MTR_1g076150 68.966 116 36 0 9 124 1 116 3.30e-55 179
MsG0780037814.01.T01 MTR_7g111290 62.676 142 51 1 9 150 1 140 1.40e-54 181
MsG0780037814.01.T01 MTR_5g007370 57.718 149 63 0 9 157 1 149 1.43e-54 179
MsG0780037814.01.T01 MTR_7g096930 61.314 137 53 0 9 145 1 137 6.00e-54 177
MsG0780037814.01.T01 MTR_3g083540 64.800 125 44 0 13 137 34 158 1.82e-53 176
MsG0780037814.01.T01 MTR_5g079670 60.800 125 49 0 11 135 2 126 2.59e-53 173
MsG0780037814.01.T01 MTR_2g034790 61.719 128 48 1 9 136 1 127 5.72e-53 176
MsG0780037814.01.T01 MTR_1g043080 65.517 116 40 0 9 124 1 116 4.93e-52 171
MsG0780037814.01.T01 MTR_7g117730 65.812 117 40 0 9 125 1 117 6.42e-52 171
MsG0780037814.01.T01 MTR_2g099740 67.241 116 38 0 9 124 1 116 8.08e-52 174
MsG0780037814.01.T01 MTR_4g121460 64.655 116 41 0 9 124 1 116 8.42e-51 170
MsG0780037814.01.T01 MTR_7g115650 59.829 117 47 0 9 125 1 117 8.50e-51 166
MsG0780037814.01.T01 MTR_2g067420 70.642 109 32 0 10 118 4 112 1.18e-50 170
MsG0780037814.01.T01 MTR_8g017440 60.976 123 48 0 9 131 1 123 2.66e-50 169
MsG0780037814.01.T01 MTR_8g027345 63.248 117 43 0 9 125 1 117 4.52e-50 167
MsG0780037814.01.T01 MTR_1g043050 60.938 128 46 1 9 136 1 124 5.28e-50 166
MsG0780037814.01.T01 MTR_2g064160 62.698 126 46 1 9 134 1 125 1.07e-49 167
MsG0780037814.01.T01 MTR_7g010210 64.957 117 41 0 9 125 1 117 1.30e-49 167
MsG0780037814.01.T01 MTR_7g010210 64.957 117 41 0 9 125 1 117 1.76e-49 165
MsG0780037814.01.T01 MTR_2g089450 62.069 116 44 0 9 124 1 116 2.64e-49 164
MsG0780037814.01.T01 MTR_7g087130 62.992 127 45 2 9 133 1 127 4.09e-49 166
MsG0780037814.01.T01 MTR_4g485530 61.600 125 47 1 11 134 2 126 5.60e-49 161
MsG0780037814.01.T01 MTR_1g017000 51.592 157 66 4 9 158 1 154 6.96e-49 163
MsG0780037814.01.T01 MTR_0251s0050 49.324 148 74 1 9 155 1 148 7.01e-49 163
MsG0780037814.01.T01 MTR_0008s0390 60.345 116 45 1 9 123 1 116 8.60e-49 163
MsG0780037814.01.T01 MTR_8g098860 62.393 117 44 0 9 125 1 117 8.71e-49 164
MsG0780037814.01.T01 MTR_8g017540 63.793 116 42 0 9 124 47 162 9.79e-49 166
MsG0780037814.01.T01 MTR_0008s0470 58.621 116 47 1 9 123 1 116 1.53e-48 163
MsG0780037814.01.T01 MTR_0140s0030 61.207 116 45 0 9 124 2 117 1.67e-48 164
MsG0780037814.01.T01 MTR_0489s0020 61.207 116 45 0 9 124 2 117 1.67e-48 164
MsG0780037814.01.T01 MTR_7g109320 54.839 155 67 2 9 162 1 153 3.05e-48 164
MsG0780037814.01.T01 MTR_3g039990 61.538 117 45 0 9 125 2 118 3.91e-48 162
MsG0780037814.01.T01 MTR_4g125520 63.866 119 43 0 9 127 1 119 4.76e-48 162
MsG0780037814.01.T01 MTR_4g065017 58.462 130 51 1 20 149 17 143 5.52e-48 163
MsG0780037814.01.T01 MTR_8g017500 59.350 123 50 0 9 131 1 123 7.88e-48 163
MsG0780037814.01.T01 MTR_2g089420 62.069 116 43 1 9 124 1 115 3.42e-47 164
MsG0780037814.01.T01 MTR_5g042030 59.664 119 48 0 18 136 5 123 1.17e-46 158
MsG0780037814.01.T01 MTR_5g014990 59.829 117 46 1 9 124 1 117 1.26e-46 159
MsG0780037814.01.T01 MTR_5g010020 62.727 110 41 0 9 118 1 110 2.47e-46 159
MsG0780037814.01.T01 MTR_8g017390 62.393 117 43 1 9 124 1 117 3.52e-46 161
MsG0780037814.01.T01 MTR_6g012180 62.727 110 41 0 9 118 1 110 1.08e-45 156
MsG0780037814.01.T01 MTR_1g017140 50.318 157 72 3 9 164 1 152 1.12e-45 157
MsG0780037814.01.T01 MTR_3g103570 59.829 117 46 1 9 124 1 117 1.84e-45 157
MsG0780037814.01.T01 MTR_2g097910 64.815 108 38 0 20 127 20 127 3.75e-45 155
MsG0780037814.01.T01 MTR_8g017340 62.393 117 43 1 9 124 1 117 6.88e-45 158
MsG0780037814.01.T01 MTR_4g057635 54.688 128 57 1 9 135 1 128 9.41e-45 154
MsG0780037814.01.T01 MTR_6g090405 60.345 116 45 1 9 123 1 116 1.17e-44 152
MsG0780037814.01.T01 MTR_8g017350 62.393 117 43 1 9 124 1 117 2.43e-44 159
MsG0780037814.01.T01 MTR_7g102110 52.555 137 58 3 9 144 1 131 1.83e-43 149
MsG0780037814.01.T01 MTR_1g100667 59.829 117 46 1 9 124 1 117 9.00e-43 147
MsG0780037814.01.T01 MTR_7g035075 61.321 106 41 0 20 125 14 119 1.24e-42 145
MsG0780037814.01.T01 MTR_0063s0090 57.522 113 48 0 9 121 1 113 1.71e-42 145
MsG0780037814.01.T01 MTR_3g028740 60.909 110 43 0 16 125 18 127 3.13e-42 148
MsG0780037814.01.T01 MTR_4g128670 58.559 111 45 1 9 118 1 111 3.94e-42 148
MsG0780037814.01.T01 MTR_8g042410 59.055 127 48 3 18 144 35 157 4.39e-42 152
MsG0780037814.01.T01 MTR_6g006030 56.303 119 50 1 9 125 1 119 4.93e-42 144
MsG0780037814.01.T01 MTR_0008s0280 55.263 114 51 0 9 122 1 114 7.85e-42 144
MsG0780037814.01.T01 MTR_1g110460 53.782 119 55 0 20 138 26 144 8.24e-42 146
MsG0780037814.01.T01 MTR_4g097570 59.091 110 44 1 9 117 1 110 2.22e-41 144
MsG0780037814.01.T01 MTR_2g095520 57.658 111 46 1 9 118 1 111 4.69e-41 144
MsG0780037814.01.T01 MTR_6g055910 59.813 107 43 0 17 123 11 117 1.14e-40 142
MsG0780037814.01.T01 MTR_4g097570 58.559 111 44 2 9 117 1 111 1.69e-40 142
MsG0780037814.01.T01 MTR_1g086510 56.667 120 51 1 16 135 17 135 2.07e-40 141
MsG0780037814.01.T01 MTR_2g033170 53.488 129 59 1 16 144 20 147 1.73e-39 140
MsG0780037814.01.T01 MTR_3g011610 57.407 108 46 0 18 125 35 142 6.14e-39 143
MsG0780037814.01.T01 MTR_1g045610 60.952 105 41 0 21 125 22 126 8.27e-39 137
MsG0780037814.01.T01 MTR_1g073170 60.952 105 41 0 21 125 21 125 1.15e-38 136
MsG0780037814.01.T01 MTR_4g100720 55.556 117 52 0 17 133 10 126 4.57e-38 132
MsG0780037814.01.T01 MTR_1g086530 53.043 115 54 0 16 130 29 143 6.27e-38 135
MsG0780037814.01.T01 MTR_3g052450 54.630 108 49 0 16 123 36 143 9.02e-38 140
MsG0780037814.01.T01 MTR_4g063100 56.311 103 45 0 21 123 8 110 2.71e-37 133
MsG0780037814.01.T01 MTR_3g052430 54.717 106 48 0 18 123 39 144 5.77e-37 138
MsG0780037814.01.T01 MTR_3g045430 49.242 132 66 1 9 139 1 132 1.05e-36 132
MsG0780037814.01.T01 MTR_4g123040 51.938 129 61 1 16 144 20 147 1.19e-36 133
MsG0780037814.01.T01 MTR_7g111290 65.000 100 33 1 51 150 1 98 3.43e-36 132
MsG0780037814.01.T01 MTR_2g096380 53.774 106 49 0 20 125 6 111 1.24e-35 128
MsG0780037814.01.T01 MTR_2g088170 55.963 109 48 0 17 125 26 134 1.64e-35 132
MsG0780037814.01.T01 MTR_1g021230 56.731 104 45 0 20 123 57 160 1.91e-35 132
MsG0780037814.01.T01 MTR_0197s0010 57.009 107 46 0 24 130 5 111 5.69e-35 126
MsG0780037814.01.T01 MTR_1g062940 53.774 106 49 0 20 125 6 111 1.22e-34 125
MsG0780037814.01.T01 MTR_8g020490 55.660 106 47 0 20 125 8 113 1.42e-34 125
MsG0780037814.01.T01 MTR_5g079120 53.211 109 51 0 16 124 57 165 2.68e-34 126
MsG0780037814.01.T01 MTR_0247s0040 51.456 103 50 0 19 121 6 108 1.58e-33 121
MsG0780037814.01.T01 MTR_5g078800 53.774 106 49 0 19 124 6 111 2.92e-33 122
MsG0780037814.01.T01 MTR_5g079290 52.830 106 50 0 19 124 16 121 3.38e-33 122
MsG0780037814.01.T01 MTR_5g079220 50.909 110 54 0 15 124 16 125 4.31e-33 122
MsG0780037814.01.T01 MTR_7g017260 53.211 109 49 1 18 124 23 131 6.09e-33 122
MsG0780037814.01.T01 MTR_5g062790 49.138 116 57 2 18 132 7 121 1.65e-32 122
MsG0780037814.01.T01 MTR_0193s0090 48.113 106 55 0 19 124 6 111 2.86e-32 118
MsG0780037814.01.T01 MTR_5g088080 44.138 145 70 5 21 159 13 152 4.62e-32 119
MsG0780037814.01.T01 MTR_5g088150 44.138 145 70 5 21 159 13 152 4.62e-32 119
MsG0780037814.01.T01 MTR_5g488210 44.138 145 70 5 21 159 13 152 4.62e-32 119
MsG0780037814.01.T01 MTR_5g488170 44.138 145 70 5 21 159 13 152 4.94e-32 119
MsG0780037814.01.T01 MTR_5g078860 52.830 106 50 0 19 124 6 111 5.59e-32 120
MsG0780037814.01.T01 MTR_5g088640 44.138 145 70 5 21 159 13 152 6.41e-32 119
MsG0780037814.01.T01 MTR_5g078910 53.333 105 49 0 20 124 7 111 2.66e-31 118
MsG0780037814.01.T01 MTR_8g060940 52.941 102 48 0 19 120 6 107 3.12e-31 117
MsG0780037814.01.T01 MTR_1g083630 50.000 114 56 1 16 129 8 120 4.15e-31 122
MsG0780037814.01.T01 MTR_5g078950 53.398 103 48 0 19 121 6 108 4.19e-31 117
MsG0780037814.01.T01 MTR_0001s0360 52.830 106 50 0 19 124 6 111 4.19e-31 117
MsG0780037814.01.T01 MTR_5g007300 56.989 93 40 0 4 96 48 140 5.04e-29 108
MsG0780037814.01.T01 MTR_5g078930 50.450 111 54 1 14 123 2 112 8.45e-29 109
MsG0780037814.01.T01 MTR_6g055910 65.753 73 25 0 51 123 16 88 9.91e-29 110
MsG0780037814.01.T01 MTR_5g016510 43.697 119 64 2 22 139 5 121 5.26e-28 110
MsG0780037814.01.T01 MTR_3g463400 44.262 122 64 3 4 123 114 233 9.87e-28 111
MsG0780037814.01.T01 MTR_5g088610 46.552 116 60 2 18 132 7 121 1.86e-27 109
MsG0780037814.01.T01 MTR_4g063100 63.014 73 27 0 51 123 9 81 1.88e-27 106
MsG0780037814.01.T01 MTR_8g006470 45.133 113 61 1 16 127 6 118 3.18e-27 107
MsG0780037814.01.T01 MTR_5g049190 46.847 111 48 3 15 116 4 112 1.10e-26 105
MsG0780037814.01.T01 MTR_6g074860 44.628 121 60 3 22 137 4 122 1.86e-26 104
MsG0780037814.01.T01 MTR_6g015455 45.536 112 58 2 22 132 5 114 3.68e-26 108
MsG0780037814.01.T01 MTR_4g128190 46.667 105 42 2 19 122 10 101 5.98e-26 102
MsG0780037814.01.T01 MTR_3g101290 41.860 129 70 3 22 147 37 163 7.24e-26 102
MsG0780037814.01.T01 MTR_7g061330 49.074 108 52 2 20 126 111 216 8.75e-26 107
MsG0780037814.01.T01 MTR_7g461410 49.074 108 52 2 20 126 111 216 8.75e-26 107
MsG0780037814.01.T01 MTR_7g061330 49.074 108 52 2 20 126 75 180 1.23e-25 106
MsG0780037814.01.T01 MTR_4g029540 45.192 104 56 1 20 122 10 113 1.43e-25 103
MsG0780037814.01.T01 MTR_2g096380 58.667 75 31 0 51 125 18 92 2.04e-25 100
MsG0780037814.01.T01 MTR_4g094982 43.103 116 64 2 22 136 5 119 2.10e-25 102
MsG0780037814.01.T01 MTR_5g070020 46.667 105 53 2 20 123 120 222 4.17e-25 103
MsG0780037814.01.T01 MTR_4g019370 44.737 114 56 3 22 134 38 145 5.01e-25 102
MsG0780037814.01.T01 MTR_4g105660 44.037 109 58 2 17 124 175 281 1.13e-23 100
MsG0780037814.01.T01 MTR_5g041570 46.667 105 53 2 22 125 134 236 1.25e-23 100
MsG0780037814.01.T01 MTR_3g077650 41.284 109 61 2 17 124 176 282 2.92e-23 99.0
MsG0780037814.01.T01 MTR_3g110028 44.340 106 56 2 20 124 83 186 5.80e-23 99.0
MsG0780037814.01.T01 MTR_4g082040 44.762 105 55 2 22 125 105 207 7.03e-23 97.8
MsG0780037814.01.T01 MTR_5g082910 45.283 106 52 3 16 120 16 116 5.84e-22 93.2
MsG0780037814.01.T01 MTR_7g451170 43.689 103 55 2 22 123 191 291 1.66e-21 93.6
MsG0780037814.01.T01 MTR_6g027340 44.211 95 50 2 25 118 19 111 1.79e-21 90.1
MsG0780037814.01.T01 MTR_6g027360 44.000 100 53 2 20 118 76 173 2.30e-21 92.0
MsG0780037814.01.T01 MTR_1g026870 42.453 106 58 2 20 124 83 186 2.31e-21 94.4
MsG0780037814.01.T01 MTR_6g027370 42.991 107 58 2 22 127 99 203 7.59e-21 91.3
MsG0780037814.01.T01 MTR_1g057980 42.424 99 56 1 20 118 78 175 7.59e-21 90.5
MsG0780037814.01.T01 MTR_7g037260 41.176 102 59 1 22 123 145 245 8.08e-21 91.3
MsG0780037814.01.T01 MTR_1g085880 46.667 105 54 2 20 122 11 115 1.03e-20 87.8
MsG0780037814.01.T01 MTR_4g088015 43.137 102 55 2 22 122 221 320 2.32e-20 90.5
MsG0780037814.01.T01 MTR_1g085770 46.667 105 54 2 20 122 11 115 2.64e-20 89.0
MsG0780037814.01.T01 MTR_3g089045 44.144 111 59 2 16 125 10 118 5.50e-20 87.8
MsG0780037814.01.T01 MTR_7g035350 44.211 95 50 2 25 118 228 320 5.78e-20 89.7
MsG0780037814.01.T01 MTR_7g450950 41.905 105 57 3 22 125 157 258 4.01e-19 86.3
MsG0780037814.01.T01 MTR_7g086960 40.336 119 63 3 6 123 78 189 5.31e-19 85.9
MsG0780037814.01.T01 MTR_5g010650 43.434 99 53 2 20 117 108 204 1.92e-18 85.1
MsG0780037814.01.T01 MTR_0023s0210 50.000 78 39 0 19 96 6 83 2.64e-17 75.5
MsG0780037814.01.T01 MTR_7g037130 38.144 97 59 1 22 118 145 240 5.98e-17 80.1
MsG0780037814.01.T01 MTR_7g061550 37.500 120 67 3 22 133 7 126 2.67e-15 75.5
MsG0780037814.01.T01 MTR_5g038910 36.364 110 67 2 25 133 29 136 8.25e-14 71.2
MsG0780037814.01.T01 MTR_5g038910 36.792 106 64 2 25 129 29 132 8.98e-14 71.2
MsG0780037814.01.T01 MTR_8g017480 55.769 52 23 0 9 60 1 52 2.83e-13 63.5
MsG0780037814.01.T01 MTR_8g468380 35.200 125 78 2 2 125 2 124 8.11e-13 68.6
MsG0780037814.01.T01 MTR_6g055910 58.696 46 19 0 78 123 2 47 2.02e-12 65.5
MsG0780037814.01.T01 MTR_4g063100 56.522 46 20 0 78 123 1 46 3.38e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037814.01.T01 AT5G14340 54.710 276 98 8 9 271 13 274 1.99e-88 265
MsG0780037814.01.T01 AT5G16600 69.481 154 44 1 9 159 1 154 8.10e-75 232
MsG0780037814.01.T01 AT1G66230 76.744 129 30 0 9 137 1 129 1.51e-72 224
MsG0780037814.01.T01 AT4G22680 69.014 142 44 0 9 150 1 142 3.79e-70 218
MsG0780037814.01.T01 AT4G12350 44.487 263 126 6 9 258 1 256 3.13e-66 208
MsG0780037814.01.T01 AT3G61250 68.992 129 40 0 9 137 1 129 4.60e-62 198
MsG0780037814.01.T01 AT3G02940 67.969 128 41 0 9 136 1 128 1.78e-61 197
MsG0780037814.01.T01 AT3G02940 67.969 128 41 0 9 136 1 128 3.81e-61 196
MsG0780037814.01.T01 AT3G02940 67.969 128 41 0 9 136 1 128 3.81e-61 196
MsG0780037814.01.T01 AT5G62320 60.784 153 51 2 10 155 3 153 6.29e-61 193
MsG0780037814.01.T01 AT5G15310 67.969 128 41 0 9 136 1 128 7.96e-61 193
MsG0780037814.01.T01 AT5G15310 67.969 128 41 0 9 136 1 128 8.00e-61 196
MsG0780037814.01.T01 AT5G15310 67.969 128 41 0 9 136 1 128 1.42e-60 195
MsG0780037814.01.T01 AT3G01140 66.176 136 43 1 9 144 1 133 2.51e-60 195
MsG0780037814.01.T01 AT4G28110 65.625 128 44 0 9 136 1 128 5.29e-60 192
MsG0780037814.01.T01 AT5G16770 66.406 128 43 0 9 136 1 128 1.19e-59 193
MsG0780037814.01.T01 AT5G16770 66.406 128 43 0 9 136 1 128 1.19e-59 193
MsG0780037814.01.T01 AT1G09540 65.000 140 49 0 9 148 1 140 1.47e-59 194
MsG0780037814.01.T01 AT4G38620 62.044 137 52 0 9 145 1 137 2.08e-59 191
MsG0780037814.01.T01 AT5G16770 66.406 128 43 0 9 136 1 128 2.34e-59 192
MsG0780037814.01.T01 AT5G16770 66.406 128 43 0 9 136 1 128 2.34e-59 192
MsG0780037814.01.T01 AT4G21440 66.406 128 43 0 9 136 1 128 5.51e-59 192
MsG0780037814.01.T01 AT5G26660 61.905 147 51 2 9 154 1 143 2.00e-58 191
MsG0780037814.01.T01 AT4G17785 65.116 129 44 1 9 136 1 129 3.25e-58 190
MsG0780037814.01.T01 AT4G17785 65.116 129 44 1 9 136 1 129 3.40e-58 190
MsG0780037814.01.T01 AT4G09460 63.158 133 49 0 9 141 1 133 4.67e-58 186
MsG0780037814.01.T01 AT1G57560 62.222 135 51 0 9 143 1 135 4.88e-58 187
MsG0780037814.01.T01 AT3G23250 61.538 143 53 1 9 151 1 141 5.72e-58 187
MsG0780037814.01.T01 AT2G16720 57.051 156 66 1 9 163 1 156 1.01e-57 186
MsG0780037814.01.T01 AT1G34670 64.844 128 45 0 9 136 1 128 1.30e-57 189
MsG0780037814.01.T01 AT5G65230 64.844 128 45 0 9 136 1 128 2.57e-57 186
MsG0780037814.01.T01 AT4G34990 57.143 147 63 0 9 155 1 147 3.60e-57 185
MsG0780037814.01.T01 AT3G01140 65.909 132 42 1 13 144 48 176 4.64e-57 188
MsG0780037814.01.T01 AT4G01680 61.594 138 53 0 9 146 1 138 6.25e-57 183
MsG0780037814.01.T01 AT1G57560 60.140 143 55 1 9 149 1 143 6.35e-57 186
MsG0780037814.01.T01 AT5G56110 62.595 131 49 0 9 139 1 131 8.07e-57 185
MsG0780037814.01.T01 AT4G05100 64.341 129 45 1 9 136 1 129 9.49e-57 185
MsG0780037814.01.T01 AT3G13540 57.317 164 61 2 13 175 16 171 1.47e-56 182
MsG0780037814.01.T01 AT5G10280 63.281 128 47 0 9 136 1 128 2.44e-56 184
MsG0780037814.01.T01 AT4G01680 61.594 138 53 0 9 146 1 138 3.40e-56 184
MsG0780037814.01.T01 AT1G22640 50.857 175 78 2 9 175 1 175 1.06e-55 181
MsG0780037814.01.T01 AT1G06180 69.828 116 35 0 9 124 1 116 1.06e-55 180
MsG0780037814.01.T01 AT1G35515 60.000 135 54 0 9 143 1 135 2.26e-55 178
MsG0780037814.01.T01 AT1G16490 56.129 155 59 2 10 161 4 152 2.02e-54 178
MsG0780037814.01.T01 AT2G31180 50.000 174 87 0 9 182 1 174 2.82e-54 177
MsG0780037814.01.T01 AT5G61420 56.552 145 62 1 9 152 1 145 6.37e-54 179
MsG0780037814.01.T01 AT3G12820 71.053 114 33 0 11 124 5 118 1.18e-53 175
MsG0780037814.01.T01 AT5G60890 57.778 135 57 0 9 143 1 135 1.45e-53 176
MsG0780037814.01.T01 AT1G56160 56.129 155 67 1 10 164 4 157 4.52e-53 175
MsG0780037814.01.T01 AT1G79180 68.696 115 36 0 10 124 4 118 6.58e-53 174
MsG0780037814.01.T01 AT5G07690 61.240 129 50 0 9 137 1 129 8.23e-53 176
MsG0780037814.01.T01 AT4G01680 56.667 150 53 1 9 146 1 150 1.38e-52 175
MsG0780037814.01.T01 AT5G54230 63.281 128 47 0 9 136 1 128 3.49e-52 173
MsG0780037814.01.T01 AT5G49330 66.379 116 39 0 9 124 1 116 2.00e-51 172
MsG0780037814.01.T01 AT3G28470 59.542 131 53 0 9 139 1 131 2.62e-51 171
MsG0780037814.01.T01 AT1G18570 58.219 146 57 2 9 150 1 146 3.97e-51 172
MsG0780037814.01.T01 AT5G07700 58.915 129 53 0 9 137 1 129 6.59e-51 171
MsG0780037814.01.T01 AT5G07700 58.915 129 53 0 9 137 1 129 6.59e-51 171
MsG0780037814.01.T01 AT1G74080 61.240 129 50 0 9 137 1 129 9.00e-51 170
MsG0780037814.01.T01 AT2G47460 66.379 116 39 0 9 124 1 116 9.83e-51 171
MsG0780037814.01.T01 AT3G47600 64.957 117 41 0 9 125 1 117 3.04e-50 169
MsG0780037814.01.T01 AT3G13890 65.517 116 40 0 9 124 1 116 3.49e-50 169
MsG0780037814.01.T01 AT1G08810 64.655 116 41 0 9 124 1 116 6.73e-50 166
MsG0780037814.01.T01 AT5G62470 64.103 117 42 0 9 125 1 117 6.92e-50 168
MsG0780037814.01.T01 AT3G62610 59.231 130 53 0 9 138 1 130 7.73e-50 168
MsG0780037814.01.T01 AT1G74430 56.204 137 60 0 9 145 1 137 8.26e-50 166
MsG0780037814.01.T01 AT3G12720 62.205 127 47 1 8 134 11 136 8.37e-50 167
MsG0780037814.01.T01 AT1G18710 57.364 129 55 0 9 137 1 129 1.04e-48 163
MsG0780037814.01.T01 AT1G74650 62.185 119 45 0 9 127 1 119 1.05e-48 165
MsG0780037814.01.T01 AT5G62470 64.103 117 41 1 9 125 1 116 2.00e-48 164
MsG0780037814.01.T01 AT3G28910 62.295 122 46 0 9 130 1 122 2.01e-48 164
MsG0780037814.01.T01 AT1G63910 57.812 128 54 0 9 136 1 128 4.72e-48 164
MsG0780037814.01.T01 AT3G13890 60.800 125 40 1 9 124 1 125 4.23e-47 161
MsG0780037814.01.T01 AT3G01530 61.207 116 45 0 20 135 25 140 5.74e-47 156
MsG0780037814.01.T01 AT2G36890 56.589 129 55 1 7 134 40 168 3.34e-46 158
MsG0780037814.01.T01 AT3G49690 59.829 117 46 1 9 124 1 117 3.73e-46 157
MsG0780037814.01.T01 AT1G79180 53.378 148 36 1 10 124 4 151 5.74e-46 157
MsG0780037814.01.T01 AT5G65790 58.974 117 47 1 9 124 1 117 5.78e-46 159
MsG0780037814.01.T01 AT2G36890 57.480 127 53 1 9 134 1 127 7.43e-46 156
MsG0780037814.01.T01 AT5G12870 66.981 106 35 0 20 125 18 123 1.37e-45 155
MsG0780037814.01.T01 AT5G23000 61.017 118 43 2 9 124 1 117 9.37e-45 154
MsG0780037814.01.T01 AT5G57620 58.974 117 47 1 9 124 1 117 1.36e-44 154
MsG0780037814.01.T01 AT4G37780 58.120 117 48 1 9 124 1 117 2.02e-44 153
MsG0780037814.01.T01 AT3G08500 62.727 110 41 0 16 125 26 135 3.80e-44 153
MsG0780037814.01.T01 AT3G27810 60.377 106 42 0 20 125 20 125 4.28e-42 144
MsG0780037814.01.T01 AT5G40350 60.952 105 41 0 20 124 17 121 4.45e-42 144
MsG0780037814.01.T01 AT1G68320 57.658 111 47 0 20 130 19 129 1.04e-41 145
MsG0780037814.01.T01 AT1G25340 53.390 118 55 0 21 138 19 136 2.15e-41 144
MsG0780037814.01.T01 AT1G48000 55.372 121 53 1 18 138 30 149 1.40e-40 141
MsG0780037814.01.T01 AT3G06490 59.130 115 47 0 16 130 15 129 1.48e-40 143
MsG0780037814.01.T01 AT5G52260 59.483 116 44 1 8 123 3 115 3.95e-40 140
MsG0780037814.01.T01 AT3G27920 58.654 104 43 0 21 124 15 118 4.27e-40 139
MsG0780037814.01.T01 AT2G32460 53.488 129 58 2 19 147 17 143 7.04e-40 145
MsG0780037814.01.T01 AT2G32460 53.488 129 58 2 19 147 5 131 8.07e-40 145
MsG0780037814.01.T01 AT5G06100 54.630 108 49 0 16 123 28 135 1.58e-39 143
MsG0780037814.01.T01 AT5G14750 59.615 104 42 0 21 124 17 120 1.63e-39 137
MsG0780037814.01.T01 AT5G26660 65.049 103 31 2 53 154 14 112 3.01e-39 140
MsG0780037814.01.T01 AT5G55020 59.259 108 44 0 18 125 24 131 3.34e-39 144
MsG0780037814.01.T01 AT5G06100 54.630 108 49 0 16 123 28 135 5.30e-39 143
MsG0780037814.01.T01 AT5G06100 54.630 108 49 0 16 123 28 135 5.30e-39 143
MsG0780037814.01.T01 AT5G06100 54.630 108 49 0 16 123 28 135 5.30e-39 143
MsG0780037814.01.T01 AT5G06100 54.630 108 49 0 16 123 28 135 5.30e-39 143
MsG0780037814.01.T01 AT3G24310 60.748 107 42 0 19 125 17 123 1.03e-38 137
MsG0780037814.01.T01 AT4G13480 61.905 105 40 0 21 125 7 111 2.14e-38 136
MsG0780037814.01.T01 AT3G30210 51.969 127 61 0 19 145 26 152 2.57e-38 136
MsG0780037814.01.T01 AT5G40330 57.692 104 44 0 21 124 13 116 2.79e-38 134
MsG0780037814.01.T01 AT3G11440 54.808 104 47 0 20 123 41 144 3.90e-38 140
MsG0780037814.01.T01 AT4G26930 47.183 142 67 2 18 158 17 151 7.31e-38 138
MsG0780037814.01.T01 AT2G47190 54.955 111 50 0 20 130 20 130 8.43e-38 135
MsG0780037814.01.T01 AT2G26960 51.938 129 58 3 17 145 17 141 9.90e-38 138
MsG0780037814.01.T01 AT3G11440 54.808 104 47 0 20 123 41 144 1.28e-37 140
MsG0780037814.01.T01 AT3G11440 54.808 104 47 0 20 123 41 144 1.28e-37 140
MsG0780037814.01.T01 AT3G11440 54.808 104 47 0 20 123 41 144 1.28e-37 140
MsG0780037814.01.T01 AT1G25340 50.847 118 53 1 21 138 19 131 4.52e-37 133
MsG0780037814.01.T01 AT4G25560 59.223 103 42 0 21 123 11 113 5.25e-37 133
MsG0780037814.01.T01 AT5G49620 53.913 115 53 0 16 130 22 136 6.36e-37 133
MsG0780037814.01.T01 AT1G25340 50.847 118 53 1 21 138 19 131 7.38e-37 133
MsG0780037814.01.T01 AT5G59780 57.547 106 45 0 20 125 8 113 1.48e-36 130
MsG0780037814.01.T01 AT3G46130 57.009 107 46 0 19 125 8 114 1.76e-36 131
MsG0780037814.01.T01 AT5G35550 59.048 105 43 0 20 124 14 118 2.02e-36 130
MsG0780037814.01.T01 AT3G48920 54.902 102 46 0 21 122 19 120 7.69e-35 127
MsG0780037814.01.T01 AT3G53200 57.692 104 44 0 20 123 9 112 1.52e-33 122
MsG0780037814.01.T01 AT5G49620 48.062 129 53 1 16 130 22 150 3.17e-33 124
MsG0780037814.01.T01 AT5G52600 46.923 130 60 1 17 137 9 138 3.44e-33 120
MsG0780037814.01.T01 AT3G12820 77.143 70 16 0 55 124 1 70 1.92e-32 118
MsG0780037814.01.T01 AT5G14750 61.905 84 27 1 46 124 3 86 3.13e-31 114
MsG0780037814.01.T01 AT2G26950 49.167 120 57 3 25 144 21 136 3.97e-31 119
MsG0780037814.01.T01 AT1G66370 51.304 115 52 1 9 123 1 111 6.05e-31 116
MsG0780037814.01.T01 AT3G47600 54.369 103 43 1 23 125 13 111 2.45e-30 116
MsG0780037814.01.T01 AT1G66380 55.238 105 47 0 19 123 7 111 4.80e-30 110
MsG0780037814.01.T01 AT3G27810 67.123 73 24 0 53 125 4 76 9.79e-30 111
MsG0780037814.01.T01 AT5G40350 68.056 72 23 0 53 124 5 76 1.12e-29 110
MsG0780037814.01.T01 AT1G56650 41.935 155 74 2 19 157 7 161 1.01e-28 110
MsG0780037814.01.T01 AT5G35550 55.789 95 39 1 33 124 27 121 1.11e-28 110
MsG0780037814.01.T01 AT3G60460 44.954 109 59 1 20 127 11 119 8.48e-28 109
MsG0780037814.01.T01 AT1G66390 54.286 105 48 0 19 123 7 111 8.52e-28 108
MsG0780037814.01.T01 AT3G46130 63.514 74 27 0 52 125 9 82 6.86e-27 105
MsG0780037814.01.T01 AT1G18960 44.828 116 61 2 22 137 10 122 7.99e-27 106
MsG0780037814.01.T01 AT5G59780 64.384 73 26 0 53 125 20 92 1.48e-26 103
MsG0780037814.01.T01 AT3G46130 64.384 73 26 0 53 125 20 92 1.66e-26 104
MsG0780037814.01.T01 AT5G58850 47.619 105 52 2 20 123 103 205 1.81e-26 107
MsG0780037814.01.T01 AT2G23290 49.515 103 49 2 22 123 13 113 2.64e-26 105
MsG0780037814.01.T01 AT1G22640 63.514 74 27 0 66 139 1 74 3.28e-26 102
MsG0780037814.01.T01 AT1G69560 39.041 146 79 3 17 161 102 238 4.49e-26 105
MsG0780037814.01.T01 AT1G69560 39.041 146 79 3 17 161 118 254 6.94e-26 105
MsG0780037814.01.T01 AT3G09230 34.054 185 112 5 5 187 44 220 7.33e-26 105
MsG0780037814.01.T01 AT3G53200 66.197 71 24 0 53 123 9 79 2.21e-25 100
MsG0780037814.01.T01 AT5G02320 46.789 109 55 2 20 127 125 231 2.75e-25 105
MsG0780037814.01.T01 AT5G02320 46.789 109 55 2 20 127 125 231 2.75e-25 105
MsG0780037814.01.T01 AT5G02320 46.789 109 55 2 20 127 65 171 3.08e-25 105
MsG0780037814.01.T01 AT1G71030 55.844 77 34 0 59 135 5 81 5.02e-25 99.0
MsG0780037814.01.T01 AT1G71030 55.844 77 34 0 59 135 19 95 6.37e-25 99.0
MsG0780037814.01.T01 AT3G09370 45.946 111 57 2 20 129 133 241 1.04e-24 103
MsG0780037814.01.T01 AT3G09370 45.946 111 57 2 20 129 128 236 1.04e-24 103
MsG0780037814.01.T01 AT4G37260 44.444 108 57 2 22 128 13 118 1.11e-24 101
MsG0780037814.01.T01 AT3G09370 45.946 111 57 2 20 129 141 249 1.91e-24 102
MsG0780037814.01.T01 AT5G11050 36.691 139 76 3 22 159 105 232 3.40e-24 101
MsG0780037814.01.T01 AT1G17950 48.544 103 50 2 22 123 5 105 4.78e-24 98.2
MsG0780037814.01.T01 AT1G26780 46.729 107 54 2 20 125 96 200 8.00e-24 98.2
MsG0780037814.01.T01 AT3G27785 46.296 108 55 2 17 123 184 289 8.30e-24 100
MsG0780037814.01.T01 AT2G39880 47.573 103 51 2 22 123 50 150 1.16e-23 99.4
MsG0780037814.01.T01 AT1G26780 46.729 107 54 2 20 125 96 200 1.58e-23 99.0
MsG0780037814.01.T01 AT5G67300 39.837 123 67 4 22 139 6 126 2.98e-23 97.1
MsG0780037814.01.T01 AT3G55730 45.794 107 55 2 22 127 56 160 3.07e-23 98.6
MsG0780037814.01.T01 AT4G18770 42.202 109 60 2 17 124 212 318 4.64e-23 98.2
MsG0780037814.01.T01 AT5G14340 40.212 189 86 8 96 271 10 184 2.76e-22 91.7
MsG0780037814.01.T01 AT3G50060 42.718 103 56 2 22 123 6 106 3.26e-22 94.4
MsG0780037814.01.T01 AT1G73410 47.619 105 52 2 22 125 6 108 4.25e-22 92.8
MsG0780037814.01.T01 AT1G66380 58.904 73 30 0 51 123 6 78 7.09e-22 88.2
MsG0780037814.01.T01 AT1G73410 47.619 105 52 2 22 125 6 108 9.84e-22 90.9
MsG0780037814.01.T01 AT5G11510 44.340 106 56 2 20 124 79 182 1.05e-21 95.5
MsG0780037814.01.T01 AT5G11510 44.340 106 56 2 20 124 79 182 1.05e-21 95.5
MsG0780037814.01.T01 AT5G11510 44.340 106 56 2 20 124 79 182 1.05e-21 95.5
MsG0780037814.01.T01 AT5G11510 44.340 106 56 2 20 124 79 182 1.18e-21 95.1
MsG0780037814.01.T01 AT3G23250 52.326 86 39 1 66 151 1 84 1.26e-21 91.3
MsG0780037814.01.T01 AT4G32730 41.509 106 59 2 20 124 85 188 1.29e-21 95.1
MsG0780037814.01.T01 AT4G32730 41.509 106 59 2 20 124 85 188 1.31e-21 95.1
MsG0780037814.01.T01 AT4G32730 41.509 106 59 2 20 124 85 188 1.31e-21 95.1
MsG0780037814.01.T01 AT4G32730 41.509 106 59 2 20 124 85 188 1.31e-21 95.1
MsG0780037814.01.T01 AT4G32730 41.509 106 59 2 20 124 85 188 1.31e-21 95.1
MsG0780037814.01.T01 AT5G11510 44.340 106 56 2 20 124 79 182 1.47e-21 94.7
MsG0780037814.01.T01 AT5G14750 66.102 59 20 0 66 124 1 59 4.11e-21 87.4
MsG0780037814.01.T01 AT5G14750 66.102 59 20 0 66 124 1 59 4.11e-21 87.4
MsG0780037814.01.T01 AT3G29020 40.000 105 60 2 22 125 65 167 6.24e-21 89.4
MsG0780037814.01.T01 AT4G33450 40.164 122 64 4 4 123 5 119 6.39e-21 89.7
MsG0780037814.01.T01 AT3G29020 40.000 105 60 2 22 125 67 169 1.41e-20 89.7
MsG0780037814.01.T01 AT5G17800 37.398 123 70 2 3 125 80 195 1.47e-20 90.1
MsG0780037814.01.T01 AT5G40360 38.835 103 62 1 20 122 156 257 4.67e-20 89.0
MsG0780037814.01.T01 AT2G25230 38.462 117 67 3 25 138 29 143 6.39e-19 84.0
MsG0780037814.01.T01 AT1G66380 50.000 86 43 0 19 104 7 92 1.77e-18 79.3
MsG0780037814.01.T01 AT4G00540 41.818 110 58 3 20 125 101 208 3.53e-17 81.3
MsG0780037814.01.T01 AT4G00540 41.818 110 58 3 20 125 99 206 5.05e-17 80.9
MsG0780037814.01.T01 AT5G39700 36.893 103 64 1 23 125 57 158 1.29e-16 76.6
MsG0780037814.01.T01 AT5G61420 55.385 65 28 1 89 152 2 66 8.41e-16 76.3
MsG0780037814.01.T01 AT2G37630 38.000 100 60 1 21 118 3 102 2.37e-14 72.8
MsG0780037814.01.T01 AT5G40430 31.356 118 79 1 1 118 33 148 2.46e-14 71.6
MsG0780037814.01.T01 AT2G02820 34.862 109 70 1 25 133 33 140 1.63e-13 70.1
MsG0780037814.01.T01 AT4G28110 68.293 41 13 0 96 136 4 44 1.95e-13 68.2
MsG0780037814.01.T01 AT2G02820 35.238 105 67 1 25 129 33 136 2.76e-13 70.1
MsG0780037814.01.T01 AT2G02820 35.238 105 67 1 25 129 33 136 3.14e-13 70.1
MsG0780037814.01.T01 AT5G15310 68.293 41 13 0 96 136 9 49 5.02e-13 67.8
MsG0780037814.01.T01 AT1G14350 35.849 106 65 2 25 129 28 131 7.74e-13 68.6
MsG0780037814.01.T01 AT1G14350 35.849 106 65 2 25 129 28 131 7.74e-13 68.6
MsG0780037814.01.T01 AT5G59780 58.333 48 20 0 78 125 1 48 2.15e-12 64.7
MsG0780037814.01.T01 AT3G46130 58.333 48 20 0 78 125 1 48 3.84e-12 64.3
MsG0780037814.01.T01 AT1G22640 39.773 88 45 2 96 175 16 103 3.28e-11 61.6
MsG0780037814.01.T01 AT1G74430 49.020 51 26 0 95 145 18 68 3.81e-11 61.6
MsG0780037814.01.T01 AT1G74650 64.286 42 15 0 86 127 2 43 4.03e-11 62.4
MsG0780037814.01.T01 AT4G25560 59.524 42 17 0 82 123 6 47 5.87e-11 61.2
MsG0780037814.01.T01 AT3G28910 60.000 45 18 0 86 130 2 46 9.60e-11 61.2

Find 62 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAACCCTCTTGGAATATT+TGG 0.126877 7:-33672668 None:intergenic
TGAAATGCTATGTTCAAATT+TGG 0.152998 7:+33672811 MsG0780037814.01.T01:CDS
CTTAAGAGGTTCAAAGAAAA+TGG 0.197461 7:+33671551 MsG0780037814.01.T01:CDS
CTCTTGGAATATTTGGTTCT+TGG 0.210662 7:-33672661 None:intergenic
AACAATGAATCCCATTATTA+AGG 0.275432 7:-33671656 None:intergenic
TACAACAATGGTTGATAGTA+TGG 0.276018 7:+33672960 MsG0780037814.01.T01:CDS
TCAATTGGCTTGTGGTTCAC+TGG 0.298740 7:-33672596 None:intergenic
GCTATGTTCAAATTTGGATT+TGG 0.302121 7:+33672817 MsG0780037814.01.T01:CDS
AAATATTTACCTGCAAGTTT+AGG 0.344140 7:-33671690 None:intergenic
CAGTAAAACCACCTCTCTTA+AGG 0.350372 7:-33671859 None:intergenic
ATTTCATTGTCAGTTCTTCC+TGG 0.356916 7:-33672518 None:intergenic
TTGCACTAGTGTTGGTGTCT+TGG 0.367675 7:-33672853 None:intergenic
TACATGCCCGTCTTGGTAAC+AGG 0.388478 7:+33671909 MsG0780037814.01.T01:CDS
TTAATAATGGGATTCATTGT+TGG 0.399119 7:+33671658 MsG0780037814.01.T01:CDS
AGAATGGTTCCTAAACTTGC+AGG 0.410051 7:+33671681 MsG0780037814.01.T01:CDS
AAATGTGGAGATTAAATCCT+TGG 0.423182 7:+33672694 MsG0780037814.01.T01:CDS
ACAATGAAATTAAGAATCAT+TGG 0.428875 7:+33672531 MsG0780037814.01.T01:CDS
TTCAAAGGTAAAGACTTAAG+AGG 0.441066 7:+33671537 None:intergenic
TGGGATTCATTGTTGGAGAA+TGG 0.443481 7:+33671665 MsG0780037814.01.T01:CDS
AAGAAGAAGCTGAAGTTCCT+TGG 0.445609 7:+33672566 MsG0780037814.01.T01:CDS
CAATTGGCTTGTGGTTCACT+GGG 0.446040 7:-33672595 None:intergenic
TGAGATGGATTAATTATTTG+AGG 0.448610 7:+33671831 MsG0780037814.01.T01:CDS
GACAAGTGTCAGTGTCATAT+TGG 0.477211 7:+33673150 MsG0780037814.01.T01:three_prime_UTR
TTAAGAGGTTCAAAGAAAAT+GGG 0.482047 7:+33671552 MsG0780037814.01.T01:CDS
AACAAAATTCTTTACAACAA+TGG 0.490192 7:+33672948 MsG0780037814.01.T01:CDS
GAGAAGAAAACAAGGTGACT+TGG 0.491688 7:+33672759 MsG0780037814.01.T01:CDS
TGTCTGAAGTATACATATCT+CGG 0.500282 7:-33673183 None:intergenic
GAGGCCATCCCATGGGAGAA+AGG 0.514074 7:-33672986 None:intergenic
AAACCACCTCTCTTAAGGTC+TGG 0.517152 7:-33671854 None:intergenic
GACTCCTTTCTCCCATGGGA+TGG 0.520032 7:+33672982 MsG0780037814.01.T01:CDS
AACAGAATTTGCACTAGTGT+TGG 0.522420 7:-33672861 None:intergenic
AGAAGAAAACAAGGTGACTT+GGG 0.527512 7:+33672760 MsG0780037814.01.T01:CDS
TTTGAAGGTCTTCTAAGATG+TGG 0.533534 7:+33671794 MsG0780037814.01.T01:intron
CAAATTTGGATTTGGAGACA+TGG 0.538450 7:+33672825 MsG0780037814.01.T01:CDS
GTCTGAAGTATACATATCTC+GGG 0.539179 7:-33673182 None:intergenic
TGATCTTCCTCAATAGTCCA+TGG 0.541020 7:-33671615 None:intergenic
AAGAGGGTTTAAAGAAAATG+TGG 0.542279 7:+33672679 MsG0780037814.01.T01:CDS
ATACAACTACATGCCCGTCT+TGG 0.546437 7:+33671902 MsG0780037814.01.T01:CDS
GTTGTACCTGTTACCAAGAC+GGG 0.553249 7:-33671915 None:intergenic
CAACCATGTTGTGATAAGGT+TGG 0.554200 7:+33671579 MsG0780037814.01.T01:CDS
GAAAGAGTTGTAGATTGAGA+TGG 0.557753 7:+33671816 MsG0780037814.01.T01:CDS
TTTATTGCTTTAGGGAGTGG+AGG 0.561234 7:-33673208 None:intergenic
GTATGGACTCCTTTCTCCCA+TGG 0.561962 7:+33672977 MsG0780037814.01.T01:CDS
GATAAGGTTGGTTTGAAGAG+AGG 0.562058 7:+33671591 MsG0780037814.01.T01:CDS
ATTAAATCCTTGGAAAGTGA+TGG 0.567935 7:+33672704 MsG0780037814.01.T01:CDS
GAGAGGACCATGGACTATTG+AGG 0.574885 7:+33671608 MsG0780037814.01.T01:CDS
AGGCCAGACCTTAAGAGAGG+TGG 0.579334 7:+33671851 MsG0780037814.01.T01:CDS
TATGGACTCCTTTCTCCCAT+GGG 0.581820 7:+33672978 MsG0780037814.01.T01:CDS
AAGACAACCATGTTGTGATA+AGG 0.590627 7:+33671575 MsG0780037814.01.T01:CDS
AGTATACATATCTCGGGCGT+CGG 0.598845 7:-33673176 None:intergenic
GGAAGATTGAGGCCATCCCA+TGG 0.599499 7:-33672994 None:intergenic
TATCTTGGTCAGGAAGATTG+AGG 0.616825 7:-33673005 None:intergenic
TTGAGGCCAGACCTTAAGAG+AGG 0.617024 7:+33671848 MsG0780037814.01.T01:CDS
GAAGATTGAGGCCATCCCAT+GGG 0.631459 7:-33672993 None:intergenic
AGGATTCATCAATAGAAATG+TGG 0.634379 7:-33672916 None:intergenic
AAGAACCAAATATTCCAAGA+GGG 0.640702 7:+33672663 MsG0780037814.01.T01:CDS
AAACCAACCTTATCACAACA+TGG 0.641918 7:-33671582 None:intergenic
TGTTGTACCTGTTACCAAGA+CGG 0.646872 7:-33671916 None:intergenic
CAAGAACCAAATATTCCAAG+AGG 0.654416 7:+33672662 MsG0780037814.01.T01:CDS
ATGGAAAAGAGAAGAAAACA+AGG 0.663052 7:+33672751 MsG0780037814.01.T01:CDS
TTGGTTTGAAGAGAGGACCA+TGG 0.663165 7:+33671598 MsG0780037814.01.T01:CDS
GGTTCACTGGGTCTAAACCA+AGG 0.715541 7:-33672583 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTTTTATCATCATCAA+GGG - Chr7:33672636-33672655 None:intergenic 15.0%
!!! TAATATTTTTATCATCATCA+AGG - Chr7:33672637-33672656 None:intergenic 15.0%
!!! TCATTTTCTCAAATTTTTAT+CGG - Chr7:33673109-33673128 None:intergenic 15.0%
!!! TGAATTTTATCCTTAATAAT+GGG + Chr7:33671646-33671665 MsG0780037814.01.T01:CDS 15.0%
!! AACAAAATTCTTTACAACAA+TGG + Chr7:33672948-33672967 MsG0780037814.01.T01:CDS 20.0%
!! ACAATGAAATTAAGAATCAT+TGG + Chr7:33672531-33672550 MsG0780037814.01.T01:CDS 20.0%
!! ATAGATAAGTTTCATTGAAA+AGG + Chr7:33671749-33671768 MsG0780037814.01.T01:intron 20.0%
!! CTTTATATTGTAGTAAAATG+CGG + Chr7:33672261-33672280 MsG0780037814.01.T01:intron 20.0%
!! TGTTATACTACAGTAAATTA+TGG + Chr7:33672070-33672089 MsG0780037814.01.T01:intron 20.0%
!! TTCCAAAAAAAGAAATATCT+TGG - Chr7:33673023-33673042 None:intergenic 20.0%
!!! CAAATCACAATTTAAAACTA+TGG + Chr7:33672350-33672369 MsG0780037814.01.T01:intron 20.0%
!!! GTGAATTTTATCCTTAATAA+TGG + Chr7:33671645-33671664 MsG0780037814.01.T01:CDS 20.0%
!!! TGTTACATTTTATTGCTTTA+GGG - Chr7:33673219-33673238 None:intergenic 20.0%
! AAAAAAGAAATATCTTGGTC+AGG - Chr7:33673018-33673037 None:intergenic 25.0%
! AAAGTCAAATCGTTATATTG+TGG + Chr7:33672138-33672157 MsG0780037814.01.T01:intron 25.0%
! AAATATTTACCTGCAAGTTT+AGG - Chr7:33671693-33671712 None:intergenic 25.0%
! AACAATGAATCCCATTATTA+AGG - Chr7:33671659-33671678 None:intergenic 25.0%
! AGACTATTGTGAATAACTTA+GGG - Chr7:33671990-33672009 None:intergenic 25.0%
! CACAAAAGAAATGACAAAAA+CGG + Chr7:33672727-33672746 MsG0780037814.01.T01:CDS 25.0%
! TGAAATGCTATGTTCAAATT+TGG + Chr7:33672811-33672830 MsG0780037814.01.T01:CDS 25.0%
! TTAAGAGGTTCAAAGAAAAT+GGG + Chr7:33671552-33671571 MsG0780037814.01.T01:CDS 25.0%
!! CGCATTTTACTACAATATAA+AGG - Chr7:33672263-33672282 None:intergenic 25.0%
!! CTGTTACATTTTATTGCTTT+AGG - Chr7:33673220-33673239 None:intergenic 25.0%
!! GTTGTAAAGAATTTTGTTGA+AGG - Chr7:33672946-33672965 None:intergenic 25.0%
!! TAAAGAATTTTGTTGAAGGT+AGG - Chr7:33672942-33672961 None:intergenic 25.0%
!! TTAATAATGGGATTCATTGT+TGG + Chr7:33671658-33671677 MsG0780037814.01.T01:CDS 25.0%
!!! CATAATTACGCACATTTTTT+AGG + Chr7:33672471-33672490 MsG0780037814.01.T01:intron 25.0%
!!! GACCAAGATATTTCTTTTTT+TGG + Chr7:33673018-33673037 MsG0780037814.01.T01:CDS 25.0%
!!! TGAGATGGATTAATTATTTG+AGG + Chr7:33671831-33671850 MsG0780037814.01.T01:CDS 25.0%
!!! TTGGTTTTAAAACAATGCAA+TGG + Chr7:33672426-33672445 MsG0780037814.01.T01:intron 25.0%
AAATGTGGAGATTAAATCCT+TGG + Chr7:33672694-33672713 MsG0780037814.01.T01:CDS 30.0%
AAGAAATGACAAAAACGGAA+TGG + Chr7:33672732-33672751 MsG0780037814.01.T01:CDS 30.0%
AAGAACCAAATATTCCAAGA+GGG + Chr7:33672663-33672682 MsG0780037814.01.T01:CDS 30.0%
AAGAGGGTTTAAAGAAAATG+TGG + Chr7:33672679-33672698 MsG0780037814.01.T01:CDS 30.0%
AGGATTCATCAATAGAAATG+TGG - Chr7:33672919-33672938 None:intergenic 30.0%
ATGGAAAAGAGAAGAAAACA+AGG + Chr7:33672751-33672770 MsG0780037814.01.T01:CDS 30.0%
ATTAAATCCTTGGAAAGTGA+TGG + Chr7:33672704-33672723 MsG0780037814.01.T01:CDS 30.0%
CCTCTCAAATTGTATTGTTA+CGG + Chr7:33672324-33672343 MsG0780037814.01.T01:intron 30.0%
CTTAAGAGGTTCAAAGAAAA+TGG + Chr7:33671551-33671570 MsG0780037814.01.T01:CDS 30.0%
GACTATTGTGAATAACTTAG+GGG - Chr7:33671989-33672008 None:intergenic 30.0%
GAGACTATTGTGAATAACTT+AGG - Chr7:33671991-33672010 None:intergenic 30.0%
GCTATGTTCAAATTTGGATT+TGG + Chr7:33672817-33672836 MsG0780037814.01.T01:CDS 30.0%
GTGAAATATGGATCTAGTAT+TGG + Chr7:33672407-33672426 MsG0780037814.01.T01:intron 30.0%
TTAAACCCTCTTGGAATATT+TGG - Chr7:33672671-33672690 None:intergenic 30.0%
TTCTAATGTTTGCACATATG+AGG + Chr7:33671963-33671982 MsG0780037814.01.T01:intron 30.0%
! AAAATTGCTTCACATTTTCC+AGG + Chr7:33672500-33672519 MsG0780037814.01.T01:CDS 30.0%
! ACAATTTAAAACTATGGTCG+AGG + Chr7:33672356-33672375 MsG0780037814.01.T01:intron 30.0%
! ACATTTTCTTTAAACCCTCT+TGG - Chr7:33672680-33672699 None:intergenic 30.0%
! ATGCGAAAAAGTGTGAAATA+TGG + Chr7:33672395-33672414 MsG0780037814.01.T01:intron 30.0%
! CAATTTAAAACTATGGTCGA+GGG + Chr7:33672357-33672376 MsG0780037814.01.T01:intron 30.0%
! TAAACCATAGTCTTAAAGTG+CGG - Chr7:33672183-33672202 None:intergenic 30.0%
! TATAACGATTTGACTTTGAG+AGG - Chr7:33672135-33672154 None:intergenic 30.0%
! TGTCTGAAGTATACATATCT+CGG - Chr7:33673186-33673205 None:intergenic 30.0%
!! AACATGGTGCATATTTTTGA+AGG + Chr7:33671779-33671798 MsG0780037814.01.T01:intron 30.0%
!! TACAACAATGGTTGATAGTA+TGG + Chr7:33672960-33672979 MsG0780037814.01.T01:CDS 30.0%
!! TTGAAAAGGTGTTTCTAACA+TGG + Chr7:33671763-33671782 MsG0780037814.01.T01:intron 30.0%
!!! AATTACGCACATTTTTTAGG+TGG + Chr7:33672474-33672493 MsG0780037814.01.T01:intron 30.0%
!!! TTATCCCTGCATTTTGTTTT+TGG + Chr7:33673267-33673286 MsG0780037814.01.T01:three_prime_UTR 30.0%
AAACCAACCTTATCACAACA+TGG - Chr7:33671585-33671604 None:intergenic 35.0%
AACAGAATTTGCACTAGTGT+TGG - Chr7:33672864-33672883 None:intergenic 35.0%
AAGACAACCATGTTGTGATA+AGG + Chr7:33671575-33671594 MsG0780037814.01.T01:CDS 35.0%
AGAAGAAAACAAGGTGACTT+GGG + Chr7:33672760-33672779 MsG0780037814.01.T01:CDS 35.0%
ATTTCATTGTCAGTTCTTCC+TGG - Chr7:33672521-33672540 None:intergenic 35.0%
CAAATTTGGATTTGGAGACA+TGG + Chr7:33672825-33672844 MsG0780037814.01.T01:CDS 35.0%
CAAGAACCAAATATTCCAAG+AGG + Chr7:33672662-33672681 MsG0780037814.01.T01:CDS 35.0%
CCGTAACAATACAATTTGAG+AGG - Chr7:33672327-33672346 None:intergenic 35.0%
GAAAGAGTTGTAGATTGAGA+TGG + Chr7:33671816-33671835 MsG0780037814.01.T01:CDS 35.0%
! AGAATTTTGTTGAAGGTAGG+AGG - Chr7:33672939-33672958 None:intergenic 35.0%
! GTCTGAAGTATACATATCTC+GGG - Chr7:33673185-33673204 None:intergenic 35.0%
!! CTCTTGGAATATTTGGTTCT+TGG - Chr7:33672664-33672683 None:intergenic 35.0%
!! TGGTTTTACTGAAATGGAAG+AGG + Chr7:33671871-33671890 MsG0780037814.01.T01:CDS 35.0%
!! TTTGAAGGTCTTCTAAGATG+TGG + Chr7:33671794-33671813 MsG0780037814.01.T01:intron 35.0%
!!! CATTTTATTGCTTTAGGGAG+TGG - Chr7:33673214-33673233 None:intergenic 35.0%
!!! GTTTGTTGCTTTTGCTCAAT+TGG - Chr7:33672614-33672633 None:intergenic 35.0%
AAGAAGAAGCTGAAGTTCCT+TGG + Chr7:33672566-33672585 MsG0780037814.01.T01:CDS 40.0%
AAGTAGAGTGTGGTAGTTTG+CGG + Chr7:33672225-33672244 MsG0780037814.01.T01:intron 40.0%
AGAATGGTTCCTAAACTTGC+AGG + Chr7:33671681-33671700 MsG0780037814.01.T01:CDS 40.0%
CAACCATGTTGTGATAAGGT+TGG + Chr7:33671579-33671598 MsG0780037814.01.T01:CDS 40.0%
CAGTAAAACCACCTCTCTTA+AGG - Chr7:33671862-33671881 None:intergenic 40.0%
GACAAGTGTCAGTGTCATAT+TGG + Chr7:33673150-33673169 MsG0780037814.01.T01:three_prime_UTR 40.0%
GAGAAGAAAACAAGGTGACT+TGG + Chr7:33672759-33672778 MsG0780037814.01.T01:CDS 40.0%
GTAGTAAAATGCGGTCATGT+GGG + Chr7:33672270-33672289 MsG0780037814.01.T01:intron 40.0%
TATCTTGGTCAGGAAGATTG+AGG - Chr7:33673008-33673027 None:intergenic 40.0%
TGATCTTCCTCAATAGTCCA+TGG - Chr7:33671618-33671637 None:intergenic 40.0%
TGGGATTCATTGTTGGAGAA+TGG + Chr7:33671665-33671684 MsG0780037814.01.T01:CDS 40.0%
TGTAGTAAAATGCGGTCATG+TGG + Chr7:33672269-33672288 MsG0780037814.01.T01:intron 40.0%
TGTTGTACCTGTTACCAAGA+CGG - Chr7:33671919-33671938 None:intergenic 40.0%
! TTTTGTGCCATCACTTTCCA+AGG - Chr7:33672714-33672733 None:intergenic 40.0%
!! GAGAGGTGGTTTTACTGAAA+TGG + Chr7:33671865-33671884 MsG0780037814.01.T01:CDS 40.0%
!! GATAAGGTTGGTTTGAAGAG+AGG + Chr7:33671591-33671610 MsG0780037814.01.T01:CDS 40.0%
!! TTGTCCGCACTTTAAGACTA+TGG + Chr7:33672176-33672195 MsG0780037814.01.T01:intron 40.0%
!! TTTATTGCTTTAGGGAGTGG+AGG - Chr7:33673211-33673230 None:intergenic 40.0%
AAACCACCTCTCTTAAGGTC+TGG - Chr7:33671857-33671876 None:intergenic 45.0%
AGTATACATATCTCGGGCGT+CGG - Chr7:33673179-33673198 None:intergenic 45.0%
ATACAACTACATGCCCGTCT+TGG + Chr7:33671902-33671921 MsG0780037814.01.T01:CDS 45.0%
CGTTATATTGTGGTCGCACT+TGG + Chr7:33672148-33672167 MsG0780037814.01.T01:intron 45.0%
GTTGTACCTGTTACCAAGAC+GGG - Chr7:33671918-33671937 None:intergenic 45.0%
TATGGACTCCTTTCTCCCAT+GGG + Chr7:33672978-33672997 MsG0780037814.01.T01:CDS 45.0%
TCGTGTATGCAAGTAGAGTG+TGG + Chr7:33672215-33672234 MsG0780037814.01.T01:intron 45.0%
! AGTGTGGTAGTTTGCGGTTA+TGG + Chr7:33672231-33672250 MsG0780037814.01.T01:intron 45.0%
! TTGGTTTGAAGAGAGGACCA+TGG + Chr7:33671598-33671617 MsG0780037814.01.T01:CDS 45.0%
!! CAATTGGCTTGTGGTTCACT+GGG - Chr7:33672598-33672617 None:intergenic 45.0%
!! TCAATTGGCTTGTGGTTCAC+TGG - Chr7:33672599-33672618 None:intergenic 45.0%
!! TTGCACTAGTGTTGGTGTCT+TGG - Chr7:33672856-33672875 None:intergenic 45.0%
!!! GCTTTTGCTCAATTGGCTTG+TGG - Chr7:33672607-33672626 None:intergenic 45.0%
GAAGATTGAGGCCATCCCAT+GGG - Chr7:33672996-33673015 None:intergenic 50.0%
GGTGTCTGCAACTACAATCG+TGG - Chr7:33672114-33672133 None:intergenic 50.0%
GGTTCACTGGGTCTAAACCA+AGG - Chr7:33672586-33672605 None:intergenic 50.0%
GTATGGACTCCTTTCTCCCA+TGG + Chr7:33672977-33672996 MsG0780037814.01.T01:CDS 50.0%
TTGAGGCCAGACCTTAAGAG+AGG + Chr7:33671848-33671867 MsG0780037814.01.T01:CDS 50.0%
! GAGAGGACCATGGACTATTG+AGG + Chr7:33671608-33671627 MsG0780037814.01.T01:CDS 50.0%
! TACATGCCCGTCTTGGTAAC+AGG + Chr7:33671909-33671928 MsG0780037814.01.T01:CDS 50.0%
AGGCCAGACCTTAAGAGAGG+TGG + Chr7:33671851-33671870 MsG0780037814.01.T01:CDS 55.0%
GACTCCTTTCTCCCATGGGA+TGG + Chr7:33672982-33673001 MsG0780037814.01.T01:CDS 55.0%
GGAAGATTGAGGCCATCCCA+TGG - Chr7:33672997-33673016 None:intergenic 55.0%
GAGGCCATCCCATGGGAGAA+AGG - Chr7:33672989-33673008 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 33671546 33673292 33671546 ID=MsG0780037814.01;Name=MsG0780037814.01
Chr7 mRNA 33671546 33673292 33671546 ID=MsG0780037814.01.T01;Parent=MsG0780037814.01;Name=MsG0780037814.01.T01;_AED=0.08;_eAED=0.07;_QI=0|1|0.66|1|1|1|3|229|285
Chr7 exon 33672493 33673292 33672493 ID=MsG0780037814.01.T01:exon:993;Parent=MsG0780037814.01.T01
Chr7 exon 33671801 33671930 33671801 ID=MsG0780037814.01.T01:exon:992;Parent=MsG0780037814.01.T01
Chr7 exon 33671546 33671702 33671546 ID=MsG0780037814.01.T01:exon:991;Parent=MsG0780037814.01.T01
Chr7 CDS 33671546 33671702 33671546 ID=MsG0780037814.01.T01:cds;Parent=MsG0780037814.01.T01
Chr7 CDS 33671801 33671930 33671801 ID=MsG0780037814.01.T01:cds;Parent=MsG0780037814.01.T01
Chr7 CDS 33672493 33673063 33672493 ID=MsG0780037814.01.T01:cds;Parent=MsG0780037814.01.T01
Chr7 three_prime_UTR 33673064 33673292 33673064 ID=MsG0780037814.01.T01:three_prime_utr;Parent=MsG0780037814.01.T01
Gene Sequence

>MsG0780037814.01.T01

AAAGACTTAAGAGGTTCAAAGAAAATGGGAAGACAACCATGTTGTGATAAGGTTGGTTTGAAGAGAGGACCATGGACTATTGAGGAAGATCACAAGCTTGTGAATTTTATCCTTAATAATGGGATTCATTGTTGGAGAATGGTTCCTAAACTTGCAGGTCTTCTAAGATGTGGAAAGAGTTGTAGATTGAGATGGATTAATTATTTGAGGCCAGACCTTAAGAGAGGTGGTTTTACTGAAATGGAAGAGGATCAAATTATACAACTACATGCCCGTCTTGGTAACAGGTGGTCAAAAATTGCTTCACATTTTCCAGGAAGAACTGACAATGAAATTAAGAATCATTGGAACACAAAAATCAAGAAGAAGCTGAAGTTCCTTGGTTTAGACCCAGTGAACCACAAGCCAATTGAGCAAAAGCAACAAACCCTTGATGATGATAAAAATATTATTAACCAAGAACCAAATATTCCAAGAGGGTTTAAAGAAAATGTGGAGATTAAATCCTTGGAAAGTGATGGCACAAAAGAAATGACAAAAACGGAATGGAAAAGAGAAGAAAACAAGGTGACTTGGGATGATACTTCTGAACTTTTGAACAATTTTGAAATGCTATGTTCAAATTTGGATTTGGAGACATGGATGAGCCAAGACACCAACACTAGTGCAAATTCTGTTTCTAGTTCTTCAGTCTCTCTTGATAATACTAGCCACATTTCTATTGATGAATCCTCCTACCTTCAACAAAATTCTTTACAACAATGGTTGATAGTATGGACTCCTTTCTCCCATGGGATGGCCTCAATCTTCCTGACCAAGATATTTCTTTTTTTGGAAAAAAGAATAAATAACTTATAA

Protein sequence

>MsG0780037814.01.T01

KDLRGSKKMGRQPCCDKVGLKRGPWTIEEDHKLVNFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHARLGNRWSKIASHFPGRTDNEIKNHWNTKIKKKLKFLGLDPVNHKPIEQKQQTLDDDKNIINQEPNIPRGFKENVEIKSLESDGTKEMTKTEWKREENKVTWDDTSELLNNFEMLCSNLDLETWMSQDTNTSANSVSSSSVSLDNTSHISIDESSYLQQNSLQQWLIVWTPFSHGMASIFLTKIFLFLEKRINNL*