Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038267.01.T01 | AES78894.2 | 91.25 | 320 | 27 | 1 | 1 | 320 | 1 | 319 | 0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038267.01.T01 | Q8L3W1 | 31.765 | 340 | 175 | 11 | 6 | 304 | 2 | 325 | 2.21E-34 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038267.01.T01 | G7KVW7 | 91.250 | 320 | 27 | 1 | 1 | 320 | 1 | 319 | 0.0 | 606 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0780038267.01.T01 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038267.01.T01 | MTR_7g050720 | 91.250 | 320 | 27 | 1 | 1 | 320 | 1 | 319 | 0.0 | 606 |
| MsG0780038267.01.T01 | MTR_3g098790 | 60.125 | 321 | 105 | 9 | 1 | 318 | 1 | 301 | 9.63e-120 | 348 |
| MsG0780038267.01.T01 | MTR_7g050560 | 57.460 | 315 | 105 | 7 | 4 | 318 | 7 | 292 | 2.43e-118 | 343 |
| MsG0780038267.01.T01 | MTR_7g050590 | 60.135 | 296 | 102 | 7 | 25 | 318 | 1 | 282 | 2.13e-117 | 340 |
| MsG0780038267.01.T01 | MTR_7g050710 | 57.595 | 316 | 120 | 7 | 4 | 318 | 7 | 309 | 3.22e-117 | 341 |
| MsG0780038267.01.T01 | MTR_7g050580 | 54.829 | 321 | 113 | 9 | 1 | 318 | 1 | 292 | 5.83e-109 | 320 |
| MsG0780038267.01.T01 | MTR_7g050640 | 74.336 | 113 | 26 | 1 | 1 | 110 | 1 | 113 | 5.24e-51 | 165 |
| MsG0780038267.01.T01 | MTR_1g108780 | 36.513 | 304 | 152 | 11 | 26 | 315 | 13 | 289 | 1.70e-48 | 169 |
| MsG0780038267.01.T01 | MTR_1g035460 | 35.880 | 301 | 168 | 7 | 25 | 315 | 1 | 286 | 8.16e-48 | 165 |
| MsG0780038267.01.T01 | MTR_8g103940 | 34.921 | 315 | 173 | 10 | 10 | 315 | 39 | 330 | 1.84e-47 | 167 |
| MsG0780038267.01.T01 | MTR_5g044670 | 32.803 | 314 | 175 | 13 | 10 | 313 | 16 | 303 | 1.50e-36 | 134 |
| MsG0780038267.01.T01 | MTR_3g061320 | 31.935 | 310 | 171 | 12 | 7 | 315 | 9 | 279 | 1.93e-35 | 130 |
| MsG0780038267.01.T01 | MTR_4g119990 | 30.892 | 314 | 196 | 8 | 9 | 316 | 14 | 312 | 1.95e-31 | 121 |
| MsG0780038267.01.T01 | MTR_3g061370 | 28.990 | 307 | 183 | 8 | 10 | 315 | 9 | 281 | 7.42e-30 | 115 |
| MsG0780038267.01.T01 | MTR_3g061330 | 32.443 | 262 | 142 | 7 | 7 | 257 | 9 | 246 | 1.55e-29 | 113 |
| MsG0780038267.01.T01 | MTR_3g061350 | 27.619 | 315 | 183 | 10 | 7 | 315 | 9 | 284 | 3.33e-28 | 110 |
| MsG0780038267.01.T01 | MTR_3g061310 | 27.987 | 318 | 179 | 10 | 7 | 315 | 9 | 285 | 7.92e-28 | 109 |
| MsG0780038267.01.T01 | MTR_6g043890 | 28.477 | 302 | 193 | 8 | 9 | 306 | 14 | 296 | 3.16e-27 | 109 |
| MsG0780038267.01.T01 | MTR_3g061340 | 29.801 | 302 | 156 | 10 | 7 | 301 | 9 | 261 | 3.58e-27 | 107 |
| MsG0780038267.01.T01 | MTR_3g061290 | 49.020 | 102 | 50 | 1 | 7 | 108 | 9 | 108 | 9.10e-26 | 102 |
| MsG0780038267.01.T01 | MTR_1g021400 | 26.074 | 326 | 212 | 7 | 9 | 311 | 29 | 348 | 1.35e-25 | 105 |
| MsG0780038267.01.T01 | MTR_1g035620 | 28.981 | 314 | 171 | 10 | 7 | 310 | 6 | 277 | 1.48e-25 | 105 |
| MsG0780038267.01.T01 | MTR_1g035640 | 28.754 | 313 | 186 | 12 | 1 | 312 | 1 | 277 | 1.06e-24 | 103 |
| MsG0780038267.01.T01 | MTR_1g050845 | 29.221 | 308 | 166 | 8 | 7 | 310 | 6 | 265 | 3.22e-24 | 103 |
| MsG0780038267.01.T01 | MTR_6g061070 | 30.503 | 318 | 193 | 12 | 9 | 311 | 17 | 321 | 3.51e-24 | 102 |
| MsG0780038267.01.T01 | MTR_5g070440 | 25.581 | 301 | 164 | 10 | 9 | 308 | 20 | 261 | 7.29e-24 | 99.0 |
| MsG0780038267.01.T01 | MTR_1g035570 | 31.861 | 317 | 181 | 13 | 1 | 314 | 1 | 285 | 1.12e-23 | 100 |
| MsG0780038267.01.T01 | MTR_1g021410 | 24.367 | 316 | 187 | 7 | 21 | 301 | 33 | 331 | 5.43e-22 | 95.5 |
| MsG0780038267.01.T01 | MTR_1g021360 | 27.835 | 291 | 173 | 7 | 21 | 301 | 193 | 456 | 7.85e-22 | 95.9 |
| MsG0780038267.01.T01 | MTR_1g021360 | 40.506 | 79 | 47 | 0 | 21 | 99 | 36 | 114 | 3.06e-11 | 64.3 |
| MsG0780038267.01.T01 | MTR_1g035650 | 34.444 | 180 | 114 | 2 | 5 | 182 | 4 | 181 | 8.06e-22 | 91.7 |
| MsG0780038267.01.T01 | MTR_1g021435 | 24.702 | 336 | 208 | 8 | 3 | 301 | 15 | 342 | 8.70e-22 | 94.7 |
| MsG0780038267.01.T01 | MTR_1g021330 | 26.586 | 331 | 198 | 10 | 9 | 302 | 25 | 347 | 9.06e-22 | 95.1 |
| MsG0780038267.01.T01 | MTR_4g068320 | 41.818 | 110 | 62 | 1 | 5 | 112 | 1 | 110 | 9.23e-22 | 95.5 |
| MsG0780038267.01.T01 | MTR_4g068320 | 35.075 | 134 | 75 | 4 | 187 | 317 | 268 | 392 | 2.64e-13 | 70.5 |
| MsG0780038267.01.T01 | MTR_1g034240 | 42.718 | 103 | 59 | 0 | 6 | 108 | 3 | 105 | 9.10e-21 | 92.4 |
| MsG0780038267.01.T01 | MTR_1g034240 | 31.667 | 120 | 73 | 3 | 189 | 308 | 275 | 385 | 7.83e-12 | 66.2 |
| MsG0780038267.01.T01 | MTR_3g005480 | 37.864 | 103 | 64 | 0 | 9 | 111 | 20 | 122 | 1.72e-20 | 89.7 |
| MsG0780038267.01.T01 | MTR_1g021270 | 24.571 | 350 | 218 | 11 | 9 | 320 | 15 | 356 | 2.81e-20 | 91.7 |
| MsG0780038267.01.T01 | MTR_3g005490 | 32.639 | 144 | 94 | 2 | 9 | 150 | 20 | 162 | 6.89e-19 | 85.1 |
| MsG0780038267.01.T01 | MTR_3g005460 | 25.625 | 320 | 170 | 10 | 9 | 317 | 261 | 523 | 1.07e-18 | 87.0 |
| MsG0780038267.01.T01 | MTR_3g005460 | 36.893 | 103 | 65 | 0 | 9 | 111 | 24 | 126 | 3.55e-18 | 85.5 |
| MsG0780038267.01.T01 | MTR_1g021440 | 27.195 | 353 | 182 | 13 | 3 | 302 | 16 | 346 | 4.33e-18 | 84.3 |
| MsG0780038267.01.T01 | MTR_3g061220 | 41.176 | 102 | 45 | 2 | 7 | 108 | 9 | 95 | 6.32e-18 | 78.6 |
| MsG0780038267.01.T01 | MTR_1g035480 | 35.664 | 143 | 82 | 4 | 9 | 145 | 16 | 154 | 8.68e-18 | 80.1 |
| MsG0780038267.01.T01 | MTR_1g021380 | 22.059 | 340 | 211 | 8 | 3 | 315 | 15 | 327 | 1.99e-17 | 82.0 |
| MsG0780038267.01.T01 | MTR_3g005495 | 34.746 | 118 | 77 | 0 | 9 | 126 | 242 | 359 | 2.13e-17 | 82.8 |
| MsG0780038267.01.T01 | MTR_3g005495 | 38.372 | 86 | 53 | 0 | 26 | 111 | 29 | 114 | 3.99e-16 | 79.3 |
| MsG0780038267.01.T01 | MTR_1g033740 | 35.772 | 123 | 76 | 2 | 9 | 131 | 21 | 140 | 6.24e-17 | 78.2 |
| MsG0780038267.01.T01 | MTR_3g005420 | 25.850 | 294 | 158 | 8 | 9 | 301 | 288 | 522 | 1.57e-16 | 80.5 |
| MsG0780038267.01.T01 | MTR_3g005420 | 28.667 | 150 | 95 | 3 | 2 | 150 | 32 | 170 | 1.65e-12 | 68.6 |
| MsG0780038267.01.T01 | MTR_1g034210 | 41.053 | 95 | 56 | 0 | 10 | 104 | 7 | 101 | 4.74e-16 | 77.8 |
| MsG0780038267.01.T01 | MTR_1g021350 | 26.791 | 321 | 210 | 7 | 11 | 320 | 22 | 328 | 5.68e-16 | 77.8 |
| MsG0780038267.01.T01 | MTR_1g034210 | 41.053 | 95 | 56 | 0 | 10 | 104 | 7 | 101 | 6.61e-16 | 77.8 |
| MsG0780038267.01.T01 | MTR_1g035440 | 39.423 | 104 | 62 | 1 | 9 | 111 | 14 | 117 | 2.52e-15 | 74.7 |
| MsG0780038267.01.T01 | MTR_3g005440 | 34.906 | 106 | 66 | 1 | 26 | 131 | 36 | 138 | 2.83e-15 | 76.6 |
| MsG0780038267.01.T01 | MTR_3g005440 | 36.893 | 103 | 65 | 0 | 9 | 111 | 241 | 343 | 6.36e-14 | 72.4 |
| MsG0780038267.01.T01 | MTR_1g021440 | 39.796 | 98 | 58 | 1 | 3 | 100 | 16 | 112 | 5.14e-15 | 74.3 |
| MsG0780038267.01.T01 | MTR_1g021440 | 39.796 | 98 | 58 | 1 | 3 | 100 | 16 | 112 | 5.87e-15 | 74.7 |
| MsG0780038267.01.T01 | MTR_1g021440 | 39.796 | 98 | 58 | 1 | 3 | 100 | 16 | 112 | 1.17e-14 | 74.3 |
| MsG0780038267.01.T01 | MTR_1g021320 | 31.138 | 167 | 99 | 4 | 9 | 175 | 183 | 333 | 1.30e-14 | 75.1 |
| MsG0780038267.01.T01 | MTR_1g021320 | 39.560 | 91 | 55 | 0 | 9 | 99 | 24 | 114 | 4.67e-14 | 73.2 |
| MsG0780038267.01.T01 | MTR_1g035500 | 32.520 | 123 | 80 | 2 | 9 | 131 | 24 | 143 | 2.50e-13 | 67.8 |
| MsG0780038267.01.T01 | MTR_1g035510 | 38.318 | 107 | 63 | 2 | 25 | 131 | 1 | 104 | 4.51e-13 | 67.8 |
| MsG0780038267.01.T01 | MTR_1g021290 | 39.506 | 81 | 49 | 0 | 24 | 104 | 169 | 249 | 8.02e-13 | 68.6 |
| MsG0780038267.01.T01 | MTR_1g021290 | 34.375 | 96 | 62 | 1 | 9 | 104 | 27 | 121 | 1.98e-12 | 67.4 |
| MsG0780038267.01.T01 | MTR_3g005420 | 28.671 | 143 | 90 | 3 | 9 | 150 | 20 | 151 | 1.82e-12 | 68.2 |
| MsG0780038267.01.T01 | MTR_1g035470 | 39.583 | 96 | 55 | 2 | 25 | 120 | 1 | 93 | 7.15e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780038267.01.T01 | AT3G18990 | 31.765 | 340 | 175 | 11 | 6 | 304 | 2 | 325 | 2.26e-35 | 131 |
| MsG0780038267.01.T01 | AT3G18990 | 31.378 | 341 | 177 | 11 | 5 | 304 | 1 | 325 | 2.87e-34 | 129 |
| MsG0780038267.01.T01 | AT3G18960 | 40.909 | 110 | 65 | 0 | 4 | 113 | 24 | 133 | 2.04e-22 | 93.2 |
| MsG0780038267.01.T01 | AT3G18960 | 40.909 | 110 | 65 | 0 | 4 | 113 | 24 | 133 | 2.15e-22 | 93.6 |
| MsG0780038267.01.T01 | AT4G01580 | 37.815 | 119 | 74 | 0 | 4 | 122 | 24 | 142 | 4.40e-22 | 92.0 |
| MsG0780038267.01.T01 | AT1G49475 | 39.815 | 108 | 64 | 1 | 10 | 117 | 34 | 140 | 3.14e-20 | 87.0 |
| MsG0780038267.01.T01 | AT4G33280 | 26.861 | 309 | 186 | 9 | 8 | 300 | 18 | 302 | 3.60e-20 | 89.7 |
| MsG0780038267.01.T01 | AT3G18960 | 45.455 | 88 | 48 | 0 | 26 | 113 | 9 | 96 | 3.65e-19 | 83.6 |
| MsG0780038267.01.T01 | AT4G33280 | 39.604 | 101 | 57 | 2 | 8 | 104 | 18 | 118 | 1.56e-12 | 67.4 |
| MsG0780038267.01.T01 | AT4G33280 | 39.604 | 101 | 57 | 2 | 8 | 104 | 18 | 118 | 2.38e-12 | 67.8 |
| MsG0780038267.01.T01 | AT1G49480 | 32.759 | 116 | 68 | 3 | 189 | 304 | 105 | 210 | 3.93e-12 | 65.5 |
| MsG0780038267.01.T01 | AT1G49480 | 32.759 | 116 | 68 | 3 | 189 | 304 | 105 | 210 | 3.93e-12 | 65.5 |
| MsG0780038267.01.T01 | AT1G49480 | 32.759 | 116 | 68 | 3 | 189 | 304 | 105 | 210 | 3.93e-12 | 65.5 |
Find 57 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTATTGCCTTTCCTAATT+AGG | 0.208443 | 7:+43116286 | None:intergenic |
| CGAAGATGTGCACTTCAAAA+TGG | 0.226194 | 7:+43117684 | None:intergenic |
| ATTCATCTTAGGTTATTAAA+TGG | 0.226202 | 7:-43116330 | MsG0780038267.01.T01:CDS |
| TTTAATCAACCATGTGAAAT+TGG | 0.235269 | 7:-43117515 | MsG0780038267.01.T01:CDS |
| TATTTCTCCACAAACTTTCT+TGG | 0.252264 | 7:+43117881 | None:intergenic |
| CTTCATTGTTCGCATCTTTA+CGG | 0.269581 | 7:-43116148 | MsG0780038267.01.T01:CDS |
| TTTGGTAAAAGACACTTATT+AGG | 0.278617 | 7:-43116375 | MsG0780038267.01.T01:CDS |
| AGAAAGTTTGTGGAGAAATA+TGG | 0.293086 | 7:-43117878 | MsG0780038267.01.T01:CDS |
| CTGTGTTAAAGTTAGGAAAT+TGG | 0.301114 | 7:-43117483 | MsG0780038267.01.T01:CDS |
| ACCTCCGAATGATGAAGATT+TGG | 0.302065 | 7:-43117585 | MsG0780038267.01.T01:CDS |
| GGTTATTAAATGGGAGAGTT+TGG | 0.317803 | 7:-43116320 | MsG0780038267.01.T01:CDS |
| AAGATCGTTGGATACCCTTT+TGG | 0.336100 | 7:+43117616 | None:intergenic |
| TTCCTAATTAGGTACCTTGC+AGG | 0.344093 | 7:+43116297 | None:intergenic |
| AAAAGACACTTATTAGGTTT+AGG | 0.347950 | 7:-43116369 | MsG0780038267.01.T01:CDS |
| GGCCTGCAAGGTACCTAATT+AGG | 0.348434 | 7:-43116299 | MsG0780038267.01.T01:CDS |
| CAGAACATACCAAGTGAGTT+TGG | 0.360251 | 7:-43116393 | MsG0780038267.01.T01:CDS |
| AGCAAGGAGATATTCATCTT+AGG | 0.368678 | 7:-43116341 | MsG0780038267.01.T01:CDS |
| GCAATAGCTGTGTTAAAGTT+AGG | 0.369740 | 7:-43117490 | MsG0780038267.01.T01:CDS |
| CCTCCGAATGATGAAGATTT+GGG | 0.375708 | 7:-43117584 | MsG0780038267.01.T01:CDS |
| ATTTCTCCACAAACTTTCTT+GGG | 0.389419 | 7:+43117882 | None:intergenic |
| TGCAAAGTGGAGATTAGATT+TGG | 0.413094 | 7:-43117813 | MsG0780038267.01.T01:CDS |
| CATTGATGCTGCTTGTAATC+TGG | 0.414628 | 7:-43117115 | MsG0780038267.01.T01:intron |
| TGGACGCATGACAGCAATAA+AGG | 0.428279 | 7:+43117143 | None:intergenic |
| TTCATCTTAGGTTATTAAAT+GGG | 0.428424 | 7:-43116329 | MsG0780038267.01.T01:CDS |
| TTTGGCTTCAACTCTTTGGA+AGG | 0.438430 | 7:+43117634 | None:intergenic |
| AAATATGGTTTCAAAAGGGT+TGG | 0.440218 | 7:-43117775 | MsG0780038267.01.T01:CDS |
| TCCAAAGAGTTGAAGCCAAA+AGG | 0.444147 | 7:-43117631 | MsG0780038267.01.T01:CDS |
| AAAAGGGTATCCAACGATCT+TGG | 0.458573 | 7:-43117614 | MsG0780038267.01.T01:CDS |
| TTACAAGCTTTCCTTGATGA+AGG | 0.460972 | 7:+43118038 | None:intergenic |
| TCTCCCAAATCTTCATCATT+CGG | 0.472378 | 7:+43117581 | None:intergenic |
| TAAAGTTAGGAAATTGGAAA+AGG | 0.483961 | 7:-43117477 | MsG0780038267.01.T01:CDS |
| GAAGATGTGCACTTCAAAAT+GGG | 0.484263 | 7:+43117685 | None:intergenic |
| ATTAGGAAAGGCAATAGAAA+AGG | 0.485719 | 7:-43116282 | MsG0780038267.01.T01:CDS |
| TTTGTGGAGAAATATGGAAA+AGG | 0.487637 | 7:-43117872 | MsG0780038267.01.T01:CDS |
| CATATTTGAAAAGCAGAAGA+TGG | 0.487743 | 7:+43117717 | None:intergenic |
| AATCTCCACTTTGCACCACT+TGG | 0.487838 | 7:+43117821 | None:intergenic |
| GGTGATCCCAAGAAAGTTTG+TGG | 0.488942 | 7:-43117888 | MsG0780038267.01.T01:CDS |
| CCAAAGAGTTGAAGCCAAAA+GGG | 0.493381 | 7:-43117630 | MsG0780038267.01.T01:CDS |
| CGTAAAGATGCGAACAATGA+AGG | 0.495472 | 7:+43116149 | None:intergenic |
| TGGCTTCAACTCTTTGGAAG+GGG | 0.496214 | 7:+43117636 | None:intergenic |
| TTGGCTTCAACTCTTTGGAA+GGG | 0.496973 | 7:+43117635 | None:intergenic |
| TTGAAATGTACTCAGGTGAA+TGG | 0.499761 | 7:-43116251 | MsG0780038267.01.T01:CDS |
| AAGGTAAGTATAGTGCTAGT+AGG | 0.504595 | 7:+43116168 | None:intergenic |
| CATAGAGTTTGCTCTGTCAA+AGG | 0.505840 | 7:+43117182 | None:intergenic |
| AGGTTTATTGCCAAGATCGT+TGG | 0.509044 | 7:+43117604 | None:intergenic |
| GAAGACAACAACTTGAAAGT+TGG | 0.520581 | 7:-43116216 | MsG0780038267.01.T01:CDS |
| CAAGCAGCATCAATGTATGA+TGG | 0.531742 | 7:+43117123 | None:intergenic |
| ATGGGAGAGTTTGGCCTGCA+AGG | 0.535413 | 7:-43116311 | MsG0780038267.01.T01:CDS |
| CCCAAATCTTCATCATTCGG+AGG | 0.550009 | 7:+43117584 | None:intergenic |
| AAGTATCATTCTTTATCTCA+AGG | 0.553311 | 7:-43117740 | MsG0780038267.01.T01:CDS |
| CGCATGACAGCAATAAAGGA+TGG | 0.564569 | 7:+43117147 | None:intergenic |
| CTATTGCTTCCAATTTCACA+TGG | 0.566631 | 7:+43117506 | None:intergenic |
| GAAAGATTTGAAATGTACTC+AGG | 0.577875 | 7:-43116258 | MsG0780038267.01.T01:CDS |
| TGTGATCAAAGCCTTCATCA+AGG | 0.598883 | 7:-43118049 | MsG0780038267.01.T01:CDS |
| GCAAGGTACCTAATTAGGAA+AGG | 0.619850 | 7:-43116294 | MsG0780038267.01.T01:CDS |
| AGACTCCAAGTGGTGCAAAG+TGG | 0.629081 | 7:-43117826 | MsG0780038267.01.T01:CDS |
| ATATATCTAAAGACTCCAAG+TGG | 0.664356 | 7:-43117836 | MsG0780038267.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAACCATATTAATATAA+CGG | + | Chr7:43116305-43116324 | None:intergenic | 10.0% |
| !!! | ACAAATATTTTAATTGTAAA+TGG | + | Chr7:43116280-43116299 | None:intergenic | 10.0% |
| !!! | ATTTTTAATCCTTTTTATTT+TGG | - | Chr7:43117503-43117522 | MsG0780038267.01.T01:CDS | 10.0% |
| !!! | TTTTTAATCCTTTTTATTTT+GGG | - | Chr7:43117504-43117523 | MsG0780038267.01.T01:CDS | 10.0% |
| !! | TAATAGATCAATGAAAATTA+TGG | - | Chr7:43116958-43116977 | MsG0780038267.01.T01:intron | 15.0% |
| !! | TATTTGTAGTTAAATATGTT+TGG | - | Chr7:43117384-43117403 | MsG0780038267.01.T01:intron | 15.0% |
| !!! | ATTTTTGTTTTGAAGAAAAT+TGG | - | Chr7:43117553-43117572 | MsG0780038267.01.T01:CDS | 15.0% |
| !!! | GTTAATCTTTATTGATAATT+TGG | - | Chr7:43117600-43117619 | MsG0780038267.01.T01:CDS | 15.0% |
| !! | ACATATGATCTTGAAAAAAT+GGG | + | Chr7:43116156-43116175 | None:intergenic | 20.0% |
| !! | ATATGGTTTAATTAATTGAC+AGG | - | Chr7:43116313-43116332 | MsG0780038267.01.T01:CDS | 20.0% |
| !! | ATTCATCTTAGGTTATTAAA+TGG | - | Chr7:43117892-43117911 | MsG0780038267.01.T01:intron | 20.0% |
| !! | ATTGGTTAAGTTTCATATTA+TGG | - | Chr7:43116903-43116922 | MsG0780038267.01.T01:intron | 20.0% |
| !! | ATTTACTTTCACTTTATGAT+TGG | - | Chr7:43116885-43116904 | MsG0780038267.01.T01:intron | 20.0% |
| !! | GGTCTATAAATAATGAAAAA+TGG | - | Chr7:43117525-43117544 | MsG0780038267.01.T01:CDS | 20.0% |
| !! | TAAGTCCATATAAAATTGTT+TGG | + | Chr7:43117441-43117460 | None:intergenic | 20.0% |
| !! | TTCATCTTAGGTTATTAAAT+GGG | - | Chr7:43117893-43117912 | MsG0780038267.01.T01:intron | 20.0% |
| !! | TTGTTTCCGTTATATTAATA+TGG | - | Chr7:43116296-43116315 | MsG0780038267.01.T01:CDS | 20.0% |
| !! | TTTATAGACCCAAAATAAAA+AGG | + | Chr7:43117515-43117534 | None:intergenic | 20.0% |
| !! | TTTGATCAGAGATATTTATA+GGG | + | Chr7:43117411-43117430 | None:intergenic | 20.0% |
| !!! | AAGGTCATAACTTTTTTTAA+TGG | - | Chr7:43117156-43117175 | MsG0780038267.01.T01:CDS | 20.0% |
| !!! | AATATTGACAAAAAGTGTAA+AGG | - | Chr7:43116782-43116801 | MsG0780038267.01.T01:intron | 20.0% |
| !!! | AATTTGGTAATTTGTTATAG+TGG | + | Chr7:43117337-43117356 | None:intergenic | 20.0% |
| !!! | TAAAAAGTGATGGAAAAATA+TGG | - | Chr7:43116432-43116451 | MsG0780038267.01.T01:intron | 20.0% |
| !!! | TAACTTTTTTTAATGGATGA+AGG | - | Chr7:43117163-43117182 | MsG0780038267.01.T01:CDS | 20.0% |
| !!! | TTAGTCCAAACAATTTTATA+TGG | - | Chr7:43117433-43117452 | MsG0780038267.01.T01:intron | 20.0% |
| !!! | TTTTGATCAGAGATATTTAT+AGG | + | Chr7:43117412-43117431 | None:intergenic | 20.0% |
| ! | AAAAGACACTTATTAGGTTT+AGG | - | Chr7:43117853-43117872 | MsG0780038267.01.T01:CDS | 25.0% |
| ! | AAGTATCATTCTTTATCTCA+AGG | - | Chr7:43116482-43116501 | MsG0780038267.01.T01:intron | 25.0% |
| ! | AGCTTAAGAAAGAAATTACA+TGG | + | Chr7:43116250-43116269 | None:intergenic | 25.0% |
| ! | AGTATCAGTAAATACATTGT+CGG | + | Chr7:43117778-43117797 | None:intergenic | 25.0% |
| ! | ATCAATGAAAATTATGGCTT+AGG | - | Chr7:43116964-43116983 | MsG0780038267.01.T01:intron | 25.0% |
| ! | CAACAAAAGCTTGAAAAAAA+AGG | + | Chr7:43116226-43116245 | None:intergenic | 25.0% |
| ! | CACATATGATCTTGAAAAAA+TGG | + | Chr7:43116157-43116176 | None:intergenic | 25.0% |
| ! | GAAAAAAAAGGTAAATGAGT+GGG | + | Chr7:43116214-43116233 | None:intergenic | 25.0% |
| ! | GGAAAAATATGGTTTCAAAA+GGG | - | Chr7:43116443-43116462 | MsG0780038267.01.T01:intron | 25.0% |
| ! | TAAAGTTAGGAAATTGGAAA+AGG | - | Chr7:43116745-43116764 | MsG0780038267.01.T01:intron | 25.0% |
| ! | TCAATGAAAATTATGGCTTA+GGG | - | Chr7:43116965-43116984 | MsG0780038267.01.T01:intron | 25.0% |
| ! | TGAAAAAAAAGGTAAATGAG+TGG | + | Chr7:43116215-43116234 | None:intergenic | 25.0% |
| ! | TGGAAAAATATGGTTTCAAA+AGG | - | Chr7:43116442-43116461 | MsG0780038267.01.T01:intron | 25.0% |
| ! | TTTAATCAACCATGTGAAAT+TGG | - | Chr7:43116707-43116726 | MsG0780038267.01.T01:intron | 25.0% |
| ! | TTTGGTAAAAGACACTTATT+AGG | - | Chr7:43117847-43117866 | MsG0780038267.01.T01:CDS | 25.0% |
| !! | TTAGATTTGGTAAAAAGTGA+TGG | - | Chr7:43116422-43116441 | MsG0780038267.01.T01:intron | 25.0% |
| !!! | TTGTTATAGTGGTTTTTCAA+GGG | + | Chr7:43117326-43117345 | None:intergenic | 25.0% |
| !!! | TTTGTTATAGTGGTTTTTCA+AGG | + | Chr7:43117327-43117346 | None:intergenic | 25.0% |
| AAATATGGTTTCAAAAGGGT+TGG | - | Chr7:43116447-43116466 | MsG0780038267.01.T01:intron | 30.0% | |
| AATACTATTGACCCACTTAA+TGG | + | Chr7:43117364-43117383 | None:intergenic | 30.0% | |
| AGAAAGTTTGTGGAGAAATA+TGG | - | Chr7:43116344-43116363 | MsG0780038267.01.T01:CDS | 30.0% | |
| ATACTATTGACCCACTTAAT+GGG | + | Chr7:43117363-43117382 | None:intergenic | 30.0% | |
| ATATATCTAAAGACTCCAAG+TGG | - | Chr7:43116386-43116405 | MsG0780038267.01.T01:CDS | 30.0% | |
| ATGATCTTGAAAAAATGGGA+TGG | + | Chr7:43116152-43116171 | None:intergenic | 30.0% | |
| ATTAGGAAAGGCAATAGAAA+AGG | - | Chr7:43117940-43117959 | MsG0780038267.01.T01:intron | 30.0% | |
| ATTTCTCCACAAACTTTCTT+GGG | + | Chr7:43116343-43116362 | None:intergenic | 30.0% | |
| CATATTTGAAAAGCAGAAGA+TGG | + | Chr7:43116508-43116527 | None:intergenic | 30.0% | |
| CTGTGTTAAAGTTAGGAAAT+TGG | - | Chr7:43116739-43116758 | MsG0780038267.01.T01:intron | 30.0% | |
| CTTTAAGCAAAACCTTTGTT+TGG | + | Chr7:43117139-43117158 | None:intergenic | 30.0% | |
| GAATGAAAAGCTAATAACTC+AGG | + | Chr7:43116862-43116881 | None:intergenic | 30.0% | |
| TATTTCTCCACAAACTTTCT+TGG | + | Chr7:43116344-43116363 | None:intergenic | 30.0% | |
| TTCTATTGCCTTTCCTAATT+AGG | + | Chr7:43117939-43117958 | None:intergenic | 30.0% | |
| TTTGTGGAGAAATATGGAAA+AGG | - | Chr7:43116350-43116369 | MsG0780038267.01.T01:CDS | 30.0% | |
| ! | AATGTTTTACACTGTCAACA+AGG | - | Chr7:43117660-43117679 | MsG0780038267.01.T01:CDS | 30.0% |
| ! | ACCAAATTTTACCCATTAAG+TGG | - | Chr7:43117349-43117368 | MsG0780038267.01.T01:intron | 30.0% |
| ! | CAAACAAAGGTTTTGCTTAA+AGG | - | Chr7:43117137-43117156 | MsG0780038267.01.T01:CDS | 30.0% |
| ! | CAGATTTGTGGTATTTTGTA+AGG | - | Chr7:43117464-43117483 | MsG0780038267.01.T01:CDS | 30.0% |
| ! | CCAAATTTTACCCATTAAGT+GGG | - | Chr7:43117350-43117369 | MsG0780038267.01.T01:intron | 30.0% |
| ! | GAAAGATTTGAAATGTACTC+AGG | - | Chr7:43117964-43117983 | MsG0780038267.01.T01:intron | 30.0% |
| !! | ATTTTGGGTGGAACAATTTT+TGG | + | Chr7:43117276-43117295 | None:intergenic | 30.0% |
| !! | CATCTTCTGCTTTTCAAATA+TGG | - | Chr7:43116506-43116525 | MsG0780038267.01.T01:intron | 30.0% |
| !!! | CTTTTTTTGTGTTAATCCTC+CGG | - | Chr7:43117191-43117210 | MsG0780038267.01.T01:CDS | 30.0% |
| AAGGTAAGTATAGTGCTAGT+AGG | + | Chr7:43118057-43118076 | None:intergenic | 35.0% | |
| AGCAAGGAGATATTCATCTT+AGG | - | Chr7:43117881-43117900 | MsG0780038267.01.T01:CDS | 35.0% | |
| ATCTTGAAAAAATGGGATGG+AGG | + | Chr7:43116149-43116168 | None:intergenic | 35.0% | |
| ATGAAAATTATGGCTTAGGG+TGG | - | Chr7:43116968-43116987 | MsG0780038267.01.T01:intron | 35.0% | |
| ATGGACTTAACTCAGATTTG+TGG | - | Chr7:43117452-43117471 | MsG0780038267.01.T01:CDS | 35.0% | |
| CTATTGCTTCCAATTTCACA+TGG | + | Chr7:43116719-43116738 | None:intergenic | 35.0% | |
| CTTCATTGTTCGCATCTTTA+CGG | - | Chr7:43118074-43118093 | MsG0780038267.01.T01:CDS | 35.0% | |
| GAAGACAACAACTTGAAAGT+TGG | - | Chr7:43118006-43118025 | MsG0780038267.01.T01:intron | 35.0% | |
| GAAGATGTGCACTTCAAAAT+GGG | + | Chr7:43116540-43116559 | None:intergenic | 35.0% | |
| GCAATAGCTGTGTTAAAGTT+AGG | - | Chr7:43116732-43116751 | MsG0780038267.01.T01:intron | 35.0% | |
| GGTTATTAAATGGGAGAGTT+TGG | - | Chr7:43117902-43117921 | MsG0780038267.01.T01:intron | 35.0% | |
| TCTCCCAAATCTTCATCATT+CGG | + | Chr7:43116644-43116663 | None:intergenic | 35.0% | |
| TGCAAAGTGGAGATTAGATT+TGG | - | Chr7:43116409-43116428 | MsG0780038267.01.T01:intron | 35.0% | |
| TTACAAGCTTTCCTTGATGA+AGG | + | Chr7:43116187-43116206 | None:intergenic | 35.0% | |
| TTAGGTTTAGGCAAAAAGCA+AGG | - | Chr7:43117865-43117884 | MsG0780038267.01.T01:CDS | 35.0% | |
| TTGAAATGTACTCAGGTGAA+TGG | - | Chr7:43117971-43117990 | MsG0780038267.01.T01:intron | 35.0% | |
| ! | CATTGTCGGAGTAAAAGTAT+AGG | + | Chr7:43117764-43117783 | None:intergenic | 35.0% |
| ! | CCCACTTAATGGGTAAAATT+TGG | + | Chr7:43117353-43117372 | None:intergenic | 35.0% |
| ! | GAATTTTGCAGGAAAGCAAT+TGG | - | Chr7:43116996-43117015 | MsG0780038267.01.T01:intron | 35.0% |
| ! | GTGGTATTTTGTAAGGAGTA+AGG | - | Chr7:43117471-43117490 | MsG0780038267.01.T01:CDS | 35.0% |
| ! | TGTCTTTTACCAAACTCACT+TGG | + | Chr7:43117841-43117860 | None:intergenic | 35.0% |
| !!! | GAAGGGGTATTTTATCTCTA+AGG | + | Chr7:43116573-43116592 | None:intergenic | 35.0% |
| ACCTCCGAATGATGAAGATT+TGG | - | Chr7:43116637-43116656 | MsG0780038267.01.T01:intron | 40.0% | |
| AGGTTTATTGCCAAGATCGT+TGG | + | Chr7:43116621-43116640 | None:intergenic | 40.0% | |
| ATCTGGTAAGCTCCAAACAA+AGG | - | Chr7:43117124-43117143 | MsG0780038267.01.T01:CDS | 40.0% | |
| CAAGCAGCATCAATGTATGA+TGG | + | Chr7:43117102-43117121 | None:intergenic | 40.0% | |
| CAGAACATACCAAGTGAGTT+TGG | - | Chr7:43117829-43117848 | MsG0780038267.01.T01:CDS | 40.0% | |
| CCAAAGAGTTGAAGCCAAAA+GGG | - | Chr7:43116592-43116611 | MsG0780038267.01.T01:intron | 40.0% | |
| CCTCCGAATGATGAAGATTT+GGG | - | Chr7:43116638-43116657 | MsG0780038267.01.T01:intron | 40.0% | |
| CGAAGATGTGCACTTCAAAA+TGG | + | Chr7:43116541-43116560 | None:intergenic | 40.0% | |
| CGTAAAGATGCGAACAATGA+AGG | + | Chr7:43118076-43118095 | None:intergenic | 40.0% | |
| GGCTAGGTTATACTTCTTCA+CGG | + | Chr7:43117255-43117274 | None:intergenic | 40.0% | |
| GGCTGAACTTCAGATTATCA+GGG | + | Chr7:43117234-43117253 | None:intergenic | 40.0% | |
| TCCAAAGAGTTGAAGCCAAA+AGG | - | Chr7:43116591-43116610 | MsG0780038267.01.T01:intron | 40.0% | |
| TGTGATCAAAGCCTTCATCA+AGG | - | Chr7:43116173-43116192 | MsG0780038267.01.T01:CDS | 40.0% | |
| TTCCTAATTAGGTACCTTGC+AGG | + | Chr7:43117928-43117947 | None:intergenic | 40.0% | |
| ! | AAGATCGTTGGATACCCTTT+TGG | + | Chr7:43116609-43116628 | None:intergenic | 40.0% |
| ! | CATAGAGTTTGCTCTGTCAA+AGG | + | Chr7:43117043-43117062 | None:intergenic | 40.0% |
| ! | CATTGATGCTGCTTGTAATC+TGG | - | Chr7:43117107-43117126 | MsG0780038267.01.T01:intron | 40.0% |
| ! | GCAAGGTACCTAATTAGGAA+AGG | - | Chr7:43117928-43117947 | MsG0780038267.01.T01:intron | 40.0% |
| ! | TTGGCTTCAACTCTTTGGAA+GGG | + | Chr7:43116590-43116609 | None:intergenic | 40.0% |
| ! | TTTGGCTTCAACTCTTTGGA+AGG | + | Chr7:43116591-43116610 | None:intergenic | 40.0% |
| !! | AAAAGGGTATCCAACGATCT+TGG | - | Chr7:43116608-43116627 | MsG0780038267.01.T01:intron | 40.0% |
| !! | TTTTCAAGGGCGAATCATTC+AGG | + | Chr7:43117313-43117332 | None:intergenic | 40.0% |
| AATCTCCACTTTGCACCACT+TGG | + | Chr7:43116404-43116423 | None:intergenic | 45.0% | |
| CCCAAATCTTCATCATTCGG+AGG | + | Chr7:43116641-43116660 | None:intergenic | 45.0% | |
| CGCATGACAGCAATAAAGGA+TGG | + | Chr7:43117078-43117097 | None:intergenic | 45.0% | |
| CGGCTGAACTTCAGATTATC+AGG | + | Chr7:43117235-43117254 | None:intergenic | 45.0% | |
| GGTGATCCCAAGAAAGTTTG+TGG | - | Chr7:43116334-43116353 | MsG0780038267.01.T01:CDS | 45.0% | |
| GTTCCACCCAAAATCGAACT+CGG | - | Chr7:43117282-43117301 | MsG0780038267.01.T01:intron | 45.0% | |
| TGGACGCATGACAGCAATAA+AGG | + | Chr7:43117082-43117101 | None:intergenic | 45.0% | |
| TTCCACCCAAAATCGAACTC+GGG | - | Chr7:43117283-43117302 | MsG0780038267.01.T01:intron | 45.0% | |
| ! | GAGAACCCGAGTTCGATTTT+GGG | + | Chr7:43117291-43117310 | None:intergenic | 45.0% |
| ! | TGGCTTCAACTCTTTGGAAG+GGG | + | Chr7:43116589-43116608 | None:intergenic | 45.0% |
| !!! | CCCTTTTGGCTTCAACTCTT+TGG | + | Chr7:43116595-43116614 | None:intergenic | 45.0% |
| !!! | GGGTGGAACAATTTTTGGCT+AGG | + | Chr7:43117271-43117290 | None:intergenic | 45.0% |
| AGACTCCAAGTGGTGCAAAG+TGG | - | Chr7:43116396-43116415 | MsG0780038267.01.T01:intron | 50.0% | |
| GTGTTAATCCTCCGGTTCCT+GGG | - | Chr7:43117199-43117218 | MsG0780038267.01.T01:CDS | 50.0% | |
| TGTGTTAATCCTCCGGTTCC+TGG | - | Chr7:43117198-43117217 | MsG0780038267.01.T01:CDS | 50.0% | |
| ! | AACCCGAGTTCGATTTTGGG+TGG | + | Chr7:43117288-43117307 | None:intergenic | 50.0% |
| ! | GGAGAACCCGAGTTCGATTT+TGG | + | Chr7:43117292-43117311 | None:intergenic | 50.0% |
| ! | GGCCTGCAAGGTACCTAATT+AGG | - | Chr7:43117923-43117942 | MsG0780038267.01.T01:intron | 50.0% |
| ! | GGGTGGTGCTTGAATTTTGC+AGG | - | Chr7:43116985-43117004 | MsG0780038267.01.T01:intron | 50.0% |
| ATGGGAGAGTTTGGCCTGCA+AGG | - | Chr7:43117911-43117930 | MsG0780038267.01.T01:intron | 55.0% | |
| ATCCTCCGGTTCCTGGGAGA+AGG | - | Chr7:43117205-43117224 | MsG0780038267.01.T01:CDS | 60.0% | |
| TCCTCCGGTTCCTGGGAGAA+GGG | - | Chr7:43117206-43117225 | MsG0780038267.01.T01:CDS | 60.0% | |
| CCTCCGGTTCCTGGGAGAAG+GGG | - | Chr7:43117207-43117226 | MsG0780038267.01.T01:CDS | 65.0% | |
| CTCCGGTTCCTGGGAGAAGG+GGG | - | Chr7:43117208-43117227 | MsG0780038267.01.T01:CDS | 65.0% | |
| TATCAGGGCCCCCTTCTCCC+AGG | + | Chr7:43117219-43117238 | None:intergenic | 65.0% | |
| CCCCTTCTCCCAGGAACCGG+AGG | + | Chr7:43117210-43117229 | None:intergenic | 70.0% | |
| GGCCCCCTTCTCCCAGGAAC+CGG | + | Chr7:43117213-43117232 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 43116131 | 43118113 | 43116131 | ID=MsG0780038267.01;Name=MsG0780038267.01 |
| Chr7 | mRNA | 43116131 | 43118113 | 43116131 | ID=MsG0780038267.01.T01;Parent=MsG0780038267.01;Name=MsG0780038267.01.T01;_AED=0.13;_eAED=0.13;_QI=0|0|0|1|1|1|4|0|321 |
| Chr7 | exon | 43118042 | 43118113 | 43118042 | ID=MsG0780038267.01.T01:exon:7791;Parent=MsG0780038267.01.T01 |
| Chr7 | exon | 43117441 | 43117909 | 43117441 | ID=MsG0780038267.01.T01:exon:7790;Parent=MsG0780038267.01.T01 |
| Chr7 | exon | 43117116 | 43117258 | 43117116 | ID=MsG0780038267.01.T01:exon:7789;Parent=MsG0780038267.01.T01 |
| Chr7 | exon | 43116131 | 43116412 | 43116131 | ID=MsG0780038267.01.T01:exon:7788;Parent=MsG0780038267.01.T01 |
| Chr7 | CDS | 43118042 | 43118113 | 43118042 | ID=MsG0780038267.01.T01:cds;Parent=MsG0780038267.01.T01 |
| Chr7 | CDS | 43117441 | 43117909 | 43117441 | ID=MsG0780038267.01.T01:cds;Parent=MsG0780038267.01.T01 |
| Chr7 | CDS | 43117116 | 43117258 | 43117116 | ID=MsG0780038267.01.T01:cds;Parent=MsG0780038267.01.T01 |
| Chr7 | CDS | 43116131 | 43116412 | 43116131 | ID=MsG0780038267.01.T01:cds;Parent=MsG0780038267.01.T01 |
| Gene Sequence |
| Protein sequence |
