AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038269.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038269.01.T01 MTR_7g050710 83.333 324 52 1 3 324 1 324 0.0 551
MsG0780038269.01.T01 MTR_3g098790 71.429 322 86 1 3 324 1 316 5.55e-164 460
MsG0780038269.01.T01 MTR_7g050580 73.270 318 70 3 3 320 1 303 6.06e-157 442
MsG0780038269.01.T01 MTR_7g050590 74.247 299 71 5 30 324 1 297 8.54e-154 433
MsG0780038269.01.T01 MTR_7g050560 69.592 319 80 4 3 320 1 303 3.29e-150 424
MsG0780038269.01.T01 MTR_7g050720 59.554 314 114 7 9 309 4 317 1.15e-116 340
MsG0780038269.01.T01 MTR_8g103940 37.380 313 160 8 13 307 37 331 3.00e-54 185
MsG0780038269.01.T01 MTR_1g108780 35.906 298 163 7 23 307 8 290 5.34e-48 167
MsG0780038269.01.T01 MTR_1g035460 34.899 298 163 8 30 307 1 287 1.10e-45 160
MsG0780038269.01.T01 MTR_7g050640 66.981 106 35 0 3 108 1 106 2.96e-44 147
MsG0780038269.01.T01 MTR_5g044670 34.177 316 181 10 15 320 16 314 6.43e-44 153
MsG0780038269.01.T01 MTR_3g061370 33.226 310 168 11 7 306 1 281 2.11e-40 143
MsG0780038269.01.T01 MTR_3g061350 33.654 312 171 12 3 306 1 284 1.13e-39 141
MsG0780038269.01.T01 MTR_3g061320 31.803 305 164 10 12 306 9 279 3.24e-39 140
MsG0780038269.01.T01 MTR_3g061310 31.126 302 176 10 12 306 9 285 9.80e-39 139
MsG0780038269.01.T01 MTR_3g061340 31.169 308 157 10 12 306 9 274 1.45e-37 135
MsG0780038269.01.T01 MTR_6g043890 33.898 295 165 10 13 293 13 291 1.72e-34 129
MsG0780038269.01.T01 MTR_3g061290 55.340 103 44 1 12 114 9 109 2.76e-33 122
MsG0780038269.01.T01 MTR_1g035620 31.803 305 164 10 12 305 6 277 8.04e-33 125
MsG0780038269.01.T01 MTR_3g061330 53.398 103 46 1 12 114 9 109 1.59e-32 121
MsG0780038269.01.T01 MTR_1g035640 31.935 310 176 10 15 317 9 290 4.35e-32 124
MsG0780038269.01.T01 MTR_1g050845 31.803 305 152 10 12 305 6 265 9.11e-31 122
MsG0780038269.01.T01 MTR_4g119990 30.492 305 195 9 13 306 13 311 5.34e-30 117
MsG0780038269.01.T01 MTR_3g005490 25.574 305 157 6 14 310 20 262 6.93e-28 109
MsG0780038269.01.T01 MTR_3g005480 26.518 313 159 7 7 310 13 263 2.16e-27 108
MsG0780038269.01.T01 MTR_1g035570 30.719 306 172 9 15 307 9 287 3.53e-27 110
MsG0780038269.01.T01 MTR_6g061070 30.503 318 193 11 8 305 11 320 5.71e-27 110
MsG0780038269.01.T01 MTR_5g070440 26.087 299 172 7 14 310 20 271 1.53e-25 103
MsG0780038269.01.T01 MTR_1g021360 28.328 293 185 7 14 294 178 457 1.31e-24 103
MsG0780038269.01.T01 MTR_1g021360 26.263 297 166 8 14 303 20 270 3.18e-16 79.3
MsG0780038269.01.T01 MTR_1g021400 25.072 347 202 8 13 315 28 360 1.55e-24 102
MsG0780038269.01.T01 MTR_3g005420 28.197 305 172 10 6 310 282 539 5.65e-24 102
MsG0780038269.01.T01 MTR_3g005420 23.759 282 147 7 14 294 39 253 2.03e-15 77.4
MsG0780038269.01.T01 MTR_1g021330 26.506 332 196 7 13 299 24 352 1.03e-22 97.8
MsG0780038269.01.T01 MTR_3g005460 24.765 319 188 8 1 310 245 520 1.21e-22 98.6
MsG0780038269.01.T01 MTR_3g005460 31.967 122 79 1 8 129 18 135 1.65e-16 80.5
MsG0780038269.01.T01 MTR_1g021410 23.964 338 197 8 13 306 21 342 1.48e-22 97.1
MsG0780038269.01.T01 MTR_3g061220 44.660 103 42 2 12 114 9 96 1.90e-22 90.9
MsG0780038269.01.T01 MTR_1g035650 33.641 217 119 8 12 222 6 203 3.75e-21 90.1
MsG0780038269.01.T01 MTR_1g021380 24.038 312 205 7 13 299 20 324 4.86e-21 92.4
MsG0780038269.01.T01 MTR_1g021270 27.042 355 203 12 10 316 11 357 9.23e-21 93.2
MsG0780038269.01.T01 MTR_4g068320 38.384 99 61 0 15 113 6 104 1.90e-19 89.0
MsG0780038269.01.T01 MTR_4g068320 33.083 133 83 2 180 312 267 393 1.54e-14 74.3
MsG0780038269.01.T01 MTR_3g005495 28.374 289 144 9 6 294 236 461 3.81e-19 88.2
MsG0780038269.01.T01 MTR_3g005495 32.323 99 63 1 31 129 29 123 7.09e-15 75.5
MsG0780038269.01.T01 MTR_1g034240 39.394 99 60 0 15 113 7 105 5.83e-19 87.4
MsG0780038269.01.T01 MTR_1g034240 32.090 134 85 2 180 313 271 398 2.61e-14 73.6
MsG0780038269.01.T01 MTR_1g035480 40.517 116 66 2 10 125 12 124 6.43e-19 83.2
MsG0780038269.01.T01 MTR_1g021435 25.000 344 196 8 13 305 20 352 2.43e-18 85.1
MsG0780038269.01.T01 MTR_1g035520 28.664 307 177 11 30 305 87 382 1.86e-17 82.8
MsG0780038269.01.T01 MTR_1g035500 37.288 118 71 2 8 125 18 132 5.11e-17 78.2
MsG0780038269.01.T01 MTR_1g035440 40.000 105 62 1 13 116 13 117 2.66e-16 77.4
MsG0780038269.01.T01 MTR_1g033740 36.441 118 72 2 8 125 15 129 3.30e-16 76.3
MsG0780038269.01.T01 MTR_3g005440 29.167 144 97 2 29 170 34 174 1.17e-15 77.8
MsG0780038269.01.T01 MTR_3g005440 31.356 118 81 0 14 131 241 358 6.55e-13 69.3
MsG0780038269.01.T01 MTR_1g034210 36.275 102 65 0 15 116 7 108 1.69e-15 76.3
MsG0780038269.01.T01 MTR_3g005420 23.759 282 147 7 14 294 20 234 2.41e-15 77.0
MsG0780038269.01.T01 MTR_1g034210 36.275 102 65 0 15 116 7 108 2.79e-15 76.3
MsG0780038269.01.T01 MTR_1g021350 26.861 309 191 10 13 299 20 315 8.53e-15 74.7
MsG0780038269.01.T01 MTR_1g035510 29.098 244 129 10 30 254 1 219 1.32e-14 72.4
MsG0780038269.01.T01 MTR_1g021320 36.957 92 58 0 13 104 23 114 1.59e-14 74.7
MsG0780038269.01.T01 MTR_1g021320 35.922 103 63 3 13 114 182 282 3.35e-12 67.8
MsG0780038269.01.T01 MTR_1g021440 27.027 185 115 6 13 193 21 189 1.61e-14 73.2
MsG0780038269.01.T01 MTR_1g021440 27.027 185 115 6 13 193 21 189 2.18e-14 72.8
MsG0780038269.01.T01 MTR_1g021440 27.027 185 115 6 13 193 21 189 3.28e-14 73.2
MsG0780038269.01.T01 MTR_1g021440 27.027 185 115 6 13 193 21 189 3.81e-14 73.2
MsG0780038269.01.T01 MTR_1g021290 29.508 122 81 2 11 129 153 272 9.24e-13 68.6
MsG0780038269.01.T01 MTR_1g021290 28.689 122 77 3 16 134 28 142 3.91e-11 63.5
MsG0780038269.01.T01 MTR_1g035490 37.500 120 68 4 190 307 82 196 3.12e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038269.01.T01 AT3G18990 26.979 341 197 5 15 310 6 339 4.58e-33 125
MsG0780038269.01.T01 AT3G18990 26.923 338 195 5 15 307 6 336 6.48e-33 125
MsG0780038269.01.T01 AT4G33280 27.711 332 187 11 14 315 19 327 2.28e-23 99.0
MsG0780038269.01.T01 AT1G49475 40.741 108 63 1 15 122 34 140 6.03e-22 91.7
MsG0780038269.01.T01 AT4G01580 41.346 104 61 0 15 118 30 133 1.38e-21 90.9
MsG0780038269.01.T01 AT3G18960 40.385 104 62 0 15 118 30 133 1.74e-20 87.8
MsG0780038269.01.T01 AT3G18960 40.385 104 62 0 15 118 30 133 1.87e-20 88.2
MsG0780038269.01.T01 AT3G18960 43.182 88 50 0 31 118 9 96 2.05e-17 79.0
MsG0780038269.01.T01 AT4G33280 38.000 100 58 2 14 109 19 118 1.16e-13 70.5
MsG0780038269.01.T01 AT4G33280 38.000 100 58 2 14 109 19 118 2.58e-13 70.5
MsG0780038269.01.T01 AT3G53310 32.353 102 67 2 5 106 2 101 4.12e-12 66.2

Find 52 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAAATGGAAATTAAATT+TGG 0.157556 7:-43172150 MsG0780038269.01.T01:CDS
AAAGATTTGTACCTCAAATT+TGG 0.180864 7:+43172022 None:intergenic
TTTCACCAACAATGTGAAAT+TGG 0.216826 7:-43171861 MsG0780038269.01.T01:CDS
AAATTTGAGGTACAAATCTT+TGG 0.253897 7:-43172020 MsG0780038269.01.T01:CDS
GGTTTCCTTGGAGAAGGTTT+TGG 0.257981 7:+43174558 None:intergenic
TGCTTCCAATTTCACATTGT+TGG 0.309809 7:+43171856 None:intergenic
GTCTTTAGACATATAGCTTT+TGG 0.314158 7:+43172182 None:intergenic
AGACTCCAAATGGTGCAAAA+TGG 0.337543 7:-43172163 MsG0780038269.01.T01:CDS
GAGAGGAGATATTCAACTTC+AGG 0.365011 7:-43170876 MsG0780038269.01.T01:CDS
AGGTGTTGAATGGGAGAGTT+TGG 0.366825 7:-43170856 MsG0780038269.01.T01:CDS
CGTTGAACACCACTTTCTTC+CGG 0.401759 7:-43171402 MsG0780038269.01.T01:intron
AAAAGAGTGATGGCAAGATA+TGG 0.414999 7:-43172127 MsG0780038269.01.T01:CDS
AATCTTTGGAAAGAGTGCTT+TGG 0.429279 7:-43172006 MsG0780038269.01.T01:CDS
ATTCAACTTCAGGTGTTGAA+TGG 0.430462 7:-43170866 MsG0780038269.01.T01:CDS
GATGATGCCAAGAAAGTTTG+TGG 0.433802 7:-43172225 MsG0780038269.01.T01:CDS
GGTCTGCTAGGTATTCTATC+AGG 0.438342 7:-43170835 MsG0780038269.01.T01:CDS
AAAGGCTTACAAGGTTTCCT+TGG 0.438933 7:+43174546 None:intergenic
TTCAACTTCAGGTGTTGAAT+GGG 0.455910 7:-43170865 MsG0780038269.01.T01:CDS
AGATATGGTTTGAGAAGGGT+TGG 0.481735 7:-43172112 MsG0780038269.01.T01:CDS
TCTATCAGGATGTGCACTAA+AGG 0.490566 7:-43170821 MsG0780038269.01.T01:CDS
AAGGACAATAACTTGAAAGT+TGG 0.499244 7:-43170758 MsG0780038269.01.T01:CDS
AGGTTTATTTCCTTGACCAT+TGG 0.505200 7:+43171941 None:intergenic
ATGGGAGAGTTTGGTCTGCT+AGG 0.505527 7:-43170847 MsG0780038269.01.T01:CDS
ATTGTTTAACATTTCAGAGT+AGG 0.512018 7:-43170649 MsG0780038269.01.T01:CDS
TTACAAGGTTTCCTTGGAGA+AGG 0.514232 7:+43174552 None:intergenic
ATATGTCTAAAGACTCCAAA+TGG 0.517821 7:-43172173 MsG0780038269.01.T01:CDS
CAAAAGAGTTGAAGCTCAGA+AGG 0.519010 7:-43171967 MsG0780038269.01.T01:CDS
ACATTGTTGGTGAAATTCAA+AGG 0.523282 7:+43171869 None:intergenic
TTAAATTTGGAAAAGAGTGA+TGG 0.536531 7:-43172137 MsG0780038269.01.T01:CDS
TCTAAAGATATGAACAATGA+AGG 0.545794 7:+43170694 None:intergenic
TGGCAAGATATGGTTTGAGA+AGG 0.555350 7:-43172117 MsG0780038269.01.T01:CDS
AAAACATGGAAAGTCGCAAA+AGG 0.558949 7:-43171823 MsG0780038269.01.T01:CDS
CTAAAATTTGAACTCACAAG+TGG 0.566527 7:-43170797 MsG0780038269.01.T01:CDS
TGAACTCACAAGTGGATGGA+AGG 0.567593 7:-43170789 MsG0780038269.01.T01:CDS
CTCATGACAACAACAAAGGA+TGG 0.571041 7:+43171434 None:intergenic
GAGCATCACTCTCTAGCTCA+TGG 0.577825 7:-43172077 MsG0780038269.01.T01:CDS
CAGAAGGTCTCCAATGGTCA+AGG 0.588926 7:-43171951 MsG0780038269.01.T01:CDS
TGCAGCTTACCGGAAGAAAG+TGG 0.589285 7:+43171393 None:intergenic
AATTTGAACTCACAAGTGGA+TGG 0.599548 7:-43170793 MsG0780038269.01.T01:CDS
TTTGATTTGAATAAGAAGAG+AGG 0.602796 7:-43170893 MsG0780038269.01.T01:CDS
GGCAAGATATGGTTTGAGAA+GGG 0.606783 7:-43172116 MsG0780038269.01.T01:CDS
ACATGGAAAGTCGCAAAAGG+TGG 0.608889 7:-43171820 MsG0780038269.01.T01:CDS
AGCATTAGTTGTGTAAAACA+TGG 0.615182 7:-43171837 MsG0780038269.01.T01:CDS
CTTACCCAAAACCTTCTCCA+AGG 0.638528 7:-43174563 MsG0780038269.01.T01:CDS
GAAGCTCAGAAGGTCTCCAA+TGG 0.639766 7:-43171957 MsG0780038269.01.T01:CDS
TGGATGGAAGGCATTTGCAA+AGG 0.640290 7:-43170777 MsG0780038269.01.T01:CDS
TGTGTCTTACAAAACAAGGA+TGG 0.644962 7:+43170917 None:intergenic
CAAATTGATAGAATGTCCAA+AGG 0.647085 7:-43171789 MsG0780038269.01.T01:intron
AAAGTGTGTCTTACAAAACA+AGG 0.647663 7:+43170913 None:intergenic
CAAGGAAATAAACCTCCGAA+TGG 0.648381 7:-43171933 MsG0780038269.01.T01:CDS
TGCACTCATGACAACAACAA+AGG 0.665197 7:+43171430 None:intergenic
CATGGCTAGTGAAATTGCTG+AGG 0.726199 7:-43174615 MsG0780038269.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAAAATGCATAAAAATA+AGG + Chr7:43171125-43171144 None:intergenic 10.0%
!!! AAATTATTTTACATTACTTT+AGG + Chr7:43172975-43172994 None:intergenic 10.0%
!!! ATATTAACATTTTTATTTTC+TGG - Chr7:43173577-43173596 MsG0780038269.01.T01:intron 10.0%
!! AAAAGAAAATTAATATGTCA+TGG + Chr7:43170933-43170952 None:intergenic 15.0%
!! AGTTATATCATTCATATTAA+TGG - Chr7:43172997-43173016 MsG0780038269.01.T01:intron 15.0%
!! CAATAAATAAATAACAGTAA+AGG + Chr7:43170735-43170754 None:intergenic 15.0%
!! GTAAAATTGGAAAAAAAATA+GGG - Chr7:43172758-43172777 MsG0780038269.01.T01:intron 15.0%
!! TTAGAATAACTTTAATTAGT+TGG - Chr7:43173650-43173669 MsG0780038269.01.T01:intron 15.0%
!! TTTCAAAAATAAAAATGTCA+TGG + Chr7:43170900-43170919 None:intergenic 15.0%
!!! AAAAATTCTAAAAATACTCT+TGG - Chr7:43171247-43171266 MsG0780038269.01.T01:intron 15.0%
!!! AAATGTTTTTAGTTTTTTAG+GGG + Chr7:43171466-43171485 None:intergenic 15.0%
!!! CAAATGTTTTTAGTTTTTTA+GGG + Chr7:43171467-43171486 None:intergenic 15.0%
!!! GGTGTTTTTATTTTTATTTT+TGG + Chr7:43174265-43174284 None:intergenic 15.0%
!! AATCAATTGTTCTGTAATTT+AGG + Chr7:43171072-43171091 None:intergenic 20.0%
!! ATGAATGAAAAAAGAAAACA+AGG + Chr7:43174288-43174307 None:intergenic 20.0%
!! GGTAAAATTGGAAAAAAAAT+AGG - Chr7:43172757-43172776 MsG0780038269.01.T01:intron 20.0%
!! TGAATGAAAAAAGAAAACAA+GGG + Chr7:43174287-43174306 None:intergenic 20.0%
!! TGCAAAATGGAAATTAAATT+TGG - Chr7:43173110-43173129 MsG0780038269.01.T01:intron 20.0%
!!! AAAAACCTTTTTATTGTTGT+TGG + Chr7:43173928-43173947 None:intergenic 20.0%
!!! AAACGTTTTTAGTTTTTTAG+AGG + Chr7:43171677-43171696 None:intergenic 20.0%
!!! AGTATTTTTAGAATTTTTGC+AGG + Chr7:43171245-43171264 None:intergenic 20.0%
!!! ATATTCATATCGTTTTTGTT+CGG + Chr7:43171536-43171555 None:intergenic 20.0%
!!! GCAAATGTTTTTAGTTTTTT+AGG + Chr7:43171468-43171487 None:intergenic 20.0%
!!! GTATTTTTAGAATTTTTGCA+GGG + Chr7:43171244-43171263 None:intergenic 20.0%
!!! TTTATTTTCTGGTGTATTAA+GGG - Chr7:43173588-43173607 MsG0780038269.01.T01:intron 20.0%
!!! TTTTATTTTCTGGTGTATTA+AGG - Chr7:43173587-43173606 MsG0780038269.01.T01:intron 20.0%
!!! TTTTATTTTTGGATAAGACT+GGG + Chr7:43174254-43174273 None:intergenic 20.0%
!!! TTTTTATTTTTGGATAAGAC+TGG + Chr7:43174255-43174274 None:intergenic 20.0%
! AAACTTAGAGTTAAACCTAA+TGG - Chr7:43171038-43171057 MsG0780038269.01.T01:intron 25.0%
! AAAGATTTGTACCTCAAATT+TGG + Chr7:43173241-43173260 None:intergenic 25.0%
! AATCAACGACATATCATAAA+TGG - Chr7:43170957-43170976 MsG0780038269.01.T01:intron 25.0%
! AGAAAGTTTGTGGAAAAATA+TGG - Chr7:43173045-43173064 MsG0780038269.01.T01:intron 25.0%
! AGGAGATTAGAAATAGATTT+AGG - Chr7:43172500-43172519 MsG0780038269.01.T01:intron 25.0%
! ATCAACGACATATCATAAAT+GGG - Chr7:43170958-43170977 MsG0780038269.01.T01:intron 25.0%
! ATTGTTTAACATTTCAGAGT+AGG - Chr7:43174611-43174630 MsG0780038269.01.T01:CDS 25.0%
! GAATGAAAAAAGAAAACAAG+GGG + Chr7:43174286-43174305 None:intergenic 25.0%
! GGTTGCTAAAAATTTAAACA+TGG + Chr7:43173687-43173706 None:intergenic 25.0%
! GTTAAAAAGATCATATCTAG+TGG + Chr7:43173952-43173971 None:intergenic 25.0%
! TAAGTATGATCTTGAAAAAG+TGG + Chr7:43170681-43170700 None:intergenic 25.0%
! TCTAAAGATATGAACAATGA+AGG + Chr7:43174569-43174588 None:intergenic 25.0%
! TCTTGCCAATTTATTCAATT+TGG - Chr7:43172917-43172936 MsG0780038269.01.T01:intron 25.0%
! TGAAAAAACTTCCAAATTTG+AGG - Chr7:43173227-43173246 MsG0780038269.01.T01:intron 25.0%
! TGAAGAAAATTGAAGAAAAG+AGG - Chr7:43171696-43171715 MsG0780038269.01.T01:intron 25.0%
! TTAAATTTGGAAAAGAGTGA+TGG - Chr7:43173123-43173142 MsG0780038269.01.T01:intron 25.0%
! TTTGTTCGGATTTAAATTTC+CGG + Chr7:43171522-43171541 None:intergenic 25.0%
!! AAATTTGAGGTACAAATCTT+TGG - Chr7:43173240-43173259 MsG0780038269.01.T01:intron 25.0%
!! AATGACCTAAAACTTGTTTA+AGG + Chr7:43171770-43171789 None:intergenic 25.0%
!! ACTTGTTTAAGGCTATAAAT+AGG + Chr7:43171759-43171778 None:intergenic 25.0%
!! CATTTCCATTTTCTATTGTT+TGG - Chr7:43174311-43174330 MsG0780038269.01.T01:intron 25.0%
!! TATAACTTTAGAAGAGAAGT+TGG + Chr7:43171015-43171034 None:intergenic 25.0%
!! TATTTTTCCACAAACTTTCT+TGG + Chr7:43173045-43173064 None:intergenic 25.0%
!! TGCAAAATTGGAACATTTTA+AGG + Chr7:43173734-43173753 None:intergenic 25.0%
!! TTAAAATGTTCCAATTTTGC+AGG - Chr7:43173733-43173752 MsG0780038269.01.T01:intron 25.0%
!!! ACATGATGTTACTTTGTATT+TGG - Chr7:43170787-43170806 MsG0780038269.01.T01:CDS 25.0%
!!! TATAGCCTTAAACAAGTTTT+AGG - Chr7:43171762-43171781 MsG0780038269.01.T01:intron 25.0%
!!! TTTGATTTGAATAAGAAGAG+AGG - Chr7:43174367-43174386 MsG0780038269.01.T01:intron 25.0%
!!! TTTTAGTTTTTTAGAGGTGA+CGG + Chr7:43171671-43171690 None:intergenic 25.0%
AAAGTGTGTCTTACAAAACA+AGG + Chr7:43174350-43174369 None:intergenic 30.0%
AAGGACAATAACTTGAAAGT+TGG - Chr7:43174502-43174521 MsG0780038269.01.T01:intron 30.0%
AAGTAACTAACAATCTGGTT+CGG + Chr7:43171288-43171307 None:intergenic 30.0%
AATAACAGTAAAGGCTTACA+AGG + Chr7:43170726-43170745 None:intergenic 30.0%
AATTTATTCAATTTGGCCAG+GGG - Chr7:43172924-43172943 MsG0780038269.01.T01:intron 30.0%
ACTGGATGTATGTTTATTCT+GGG + Chr7:43172829-43172848 None:intergenic 30.0%
AGAATACTAACAATACGTTC+CGG - Chr7:43172714-43172733 MsG0780038269.01.T01:intron 30.0%
AGCATTAGTTGTGTAAAACA+TGG - Chr7:43173423-43173442 MsG0780038269.01.T01:intron 30.0%
AGTAGCCAACAACAATAAAA+AGG - Chr7:43173920-43173939 MsG0780038269.01.T01:intron 30.0%
ATAAATGCAGTCAAAAAACG+TGG + Chr7:43172086-43172105 None:intergenic 30.0%
ATATGTCTAAAGACTCCAAA+TGG - Chr7:43173087-43173106 MsG0780038269.01.T01:intron 30.0%
ATATTTGACGATAATCTTCG+AGG + Chr7:43173708-43173727 None:intergenic 30.0%
ATGATCTTGAAAAAGTGGAT+TGG + Chr7:43170676-43170695 None:intergenic 30.0%
CAAATTGATAGAATGTCCAA+AGG - Chr7:43173471-43173490 MsG0780038269.01.T01:intron 30.0%
CAATTTATTCAATTTGGCCA+GGG - Chr7:43172923-43172942 MsG0780038269.01.T01:intron 30.0%
CATATCTAAAAAGCAGAAGA+TGG + Chr7:43173209-43173228 None:intergenic 30.0%
CTAAAATTTGAACTCACAAG+TGG - Chr7:43174463-43174482 MsG0780038269.01.T01:intron 30.0%
GACATAAAATCGTATACCTT+TGG + Chr7:43173490-43173509 None:intergenic 30.0%
GTAATCACATGTGTCAATAT+CGG + Chr7:43174025-43174044 None:intergenic 30.0%
GTTCTGCTAAAATACTATTC+CGG - Chr7:43172667-43172686 MsG0780038269.01.T01:intron 30.0%
TACTGGATGTATGTTTATTC+TGG + Chr7:43172830-43172849 None:intergenic 30.0%
TACTTCCGGAAAATAAAATC+CGG - Chr7:43171303-43171322 MsG0780038269.01.T01:intron 30.0%
TAGTATTCTTCAGATGTTTC+CGG + Chr7:43172703-43172722 None:intergenic 30.0%
TATCTATAAAAGGCCAATGA+TGG + Chr7:43172217-43172236 None:intergenic 30.0%
TGAAAGAGAGCCATTAATTT+GGG + Chr7:43171836-43171855 None:intergenic 30.0%
TGCAGAAAATTGAAGAAAAG+AGG - Chr7:43171485-43171504 MsG0780038269.01.T01:CDS 30.0%
TTCTGCCAAACAATAGAAAA+TGG + Chr7:43174319-43174338 None:intergenic 30.0%
TTGAAAGAGAGCCATTAATT+TGG + Chr7:43171837-43171856 None:intergenic 30.0%
TTTCACCAACAATGTGAAAT+TGG - Chr7:43173399-43173418 MsG0780038269.01.T01:intron 30.0%
TTTGTGGAAAAATATGGAAG+AGG - Chr7:43173051-43173070 MsG0780038269.01.T01:intron 30.0%
! AATTTCCATTTTGCACCATT+TGG + Chr7:43173105-43173124 None:intergenic 30.0%
! ACATTGTTGGTGAAATTCAA+AGG + Chr7:43173394-43173413 None:intergenic 30.0%
! ATCAATTTTACCGTGACAAT+TGG + Chr7:43174129-43174148 None:intergenic 30.0%
! GTCTTTAGACATATAGCTTT+TGG + Chr7:43173081-43173100 None:intergenic 30.0%
! TAAGTACCTGATGTGTATTT+TGG - Chr7:43172852-43172871 MsG0780038269.01.T01:intron 30.0%
! TACATTACTTTAGGAAACAC+TGG + Chr7:43172966-43172985 None:intergenic 30.0%
! TTAATCCGGAAAGTATATTC+CGG - Chr7:43171952-43171971 MsG0780038269.01.T01:CDS 30.0%
! TTCTAAAAATACTCTTGGTC+CGG - Chr7:43171252-43171271 MsG0780038269.01.T01:intron 30.0%
!!! ACGTTTTTTGACTGCATTTA+TGG - Chr7:43172085-43172104 MsG0780038269.01.T01:CDS 30.0%
!!! CATTGGCCTTTTATAGATAA+GGG - Chr7:43172218-43172237 MsG0780038269.01.T01:CDS 30.0%
!!! CTATTCCGGATTTTAAAATC+CGG - Chr7:43172681-43172700 MsG0780038269.01.T01:intron 30.0%
!!! TCATTGGCCTTTTATAGATA+AGG - Chr7:43172217-43172236 MsG0780038269.01.T01:CDS 30.0%
!!! TGTTTCCGGATTTTAAAATC+CGG + Chr7:43172689-43172708 None:intergenic 30.0%
!!! TTTTAGTTTTTTAGGGGTGT+CGG + Chr7:43171460-43171479 None:intergenic 30.0%
!!! TTTTTTTCCAATTTTACCCC+TGG + Chr7:43172755-43172774 None:intergenic 30.0%
AAAACATGGAAAGTCGCAAA+AGG - Chr7:43173437-43173456 MsG0780038269.01.T01:intron 35.0%
AAAAGAGGTGAAGAGATTTC+CGG - Chr7:43171500-43171519 MsG0780038269.01.T01:CDS 35.0%
AAAAGAGGTGAAGTGAAGAA+TGG - Chr7:43171711-43171730 MsG0780038269.01.T01:intron 35.0%
AAAAGAGTGATGGCAAGATA+TGG - Chr7:43173133-43173152 MsG0780038269.01.T01:intron 35.0%
AAGTATATTCCGGAAACCAA+AGG - Chr7:43171962-43171981 MsG0780038269.01.T01:CDS 35.0%
AATAGCATTTCACCTTGTGT+GGG + Chr7:43171608-43171627 None:intergenic 35.0%
AATGTTTCTTTGCAGCTTAC+CGG + Chr7:43173880-43173899 None:intergenic 35.0%
AATTTGAACTCACAAGTGGA+TGG - Chr7:43174467-43174486 MsG0780038269.01.T01:intron 35.0%
ACATTCCGGAATGTAAAATC+CGG + Chr7:43171882-43171901 None:intergenic 35.0%
ACCAGATTGTTAGTTACTTC+CGG - Chr7:43171289-43171308 MsG0780038269.01.T01:intron 35.0%
ACGAAGCCCTTATCTATAAA+AGG + Chr7:43172227-43172246 None:intergenic 35.0%
ACTTTCAGGGTTTGTATGAA+CGG - Chr7:43172252-43172271 MsG0780038269.01.T01:intron 35.0%
AGGTTTATTTCCTTGACCAT+TGG + Chr7:43173322-43173341 None:intergenic 35.0%
AGTCAATGAAAACGTGTTAG+TGG - Chr7:43171795-43171814 MsG0780038269.01.T01:CDS 35.0%
CATTATGTAGCCAATTGTCA+CGG - Chr7:43174116-43174135 MsG0780038269.01.T01:intron 35.0%
CCAATTTATTCAATTTGGCC+AGG - Chr7:43172922-43172941 MsG0780038269.01.T01:intron 35.0%
CCTGGCCAAATTGAATAAAT+TGG + Chr7:43172925-43172944 None:intergenic 35.0%
CCTTATGATGGCATGATAAA+AGG - Chr7:43170860-43170879 MsG0780038269.01.T01:CDS 35.0%
GTAAGCTGCAAAGAAACATT+TGG - Chr7:43173880-43173899 MsG0780038269.01.T01:intron 35.0%
GTGTCTTTCTTTGATGTCAA+GGG - Chr7:43171348-43171367 MsG0780038269.01.T01:intron 35.0%
TATGTCTTCTTCATTGTGTC+AGG - Chr7:43173504-43173523 MsG0780038269.01.T01:intron 35.0%
TATTGCAGGGTTCATATGAA+CGG - Chr7:43171413-43171432 MsG0780038269.01.T01:CDS 35.0%
TCACCATTATCGCATTAATC+CGG - Chr7:43171938-43171957 MsG0780038269.01.T01:CDS 35.0%
TGACAATTGGCTACATAATG+TGG + Chr7:43174116-43174135 None:intergenic 35.0%
TGCTTCCAATTTCACATTGT+TGG + Chr7:43173407-43173426 None:intergenic 35.0%
TGTGTCTTACAAAACAAGGA+TGG + Chr7:43174346-43174365 None:intergenic 35.0%
TGTGTCTTTCTTTGATGTCA+AGG - Chr7:43171347-43171366 MsG0780038269.01.T01:intron 35.0%
TTTCCGGATTAATGCGATAA+TGG + Chr7:43171944-43171963 None:intergenic 35.0%
! AATGCGATAATGGTGAACAA+GGG + Chr7:43171934-43171953 None:intergenic 35.0%
! CCTTTTATCATGCCATCATA+AGG + Chr7:43170863-43170882 None:intergenic 35.0%
! TAATGCGATAATGGTGAACA+AGG + Chr7:43171935-43171954 None:intergenic 35.0%
!! AATCTTTGGAAAGAGTGCTT+TGG - Chr7:43173254-43173273 MsG0780038269.01.T01:intron 35.0%
!! ATGGAGGTATTTGTTGAAGA+TGG - Chr7:43171730-43171749 MsG0780038269.01.T01:intron 35.0%
!! ATTCAACTTCAGGTGTTGAA+TGG - Chr7:43174394-43174413 MsG0780038269.01.T01:intron 35.0%
!! CACTTGTTTTCCTGCAAAAT+TGG + Chr7:43173746-43173765 None:intergenic 35.0%
!! GGTTTGGAAGGGTATTTATA+GGG + Chr7:43172137-43172156 None:intergenic 35.0%
!! TTCAACTTCAGGTGTTGAAT+GGG - Chr7:43174395-43174414 MsG0780038269.01.T01:intron 35.0%
AAAGGCTTACAAGGTTTCCT+TGG + Chr7:43170717-43170736 None:intergenic 40.0%
AAGACTCAGATGACAAGGTA+AGG + Chr7:43170992-43171011 None:intergenic 40.0%
AAGCCCCAGAAATATCTCTA+AGG - Chr7:43171160-43171179 MsG0780038269.01.T01:intron 40.0%
AATAGCATTTCAGCTTGTGC+GGG + Chr7:43171397-43171416 None:intergenic 40.0%
AATGCTATTGCAGGGTTCAT+AGG - Chr7:43171408-43171427 MsG0780038269.01.T01:CDS 40.0%
ACAAGCTGAAATGCTATTGC+AGG - Chr7:43171399-43171418 MsG0780038269.01.T01:intron 40.0%
ACAAGGTGAAATGCTATTGC+AGG - Chr7:43171610-43171629 MsG0780038269.01.T01:intron 40.0%
ACATGTGTCAATATCGGACA+CGG + Chr7:43174019-43174038 None:intergenic 40.0%
ACCGTCCAAACCCAAATTAA+TGG - Chr7:43171823-43171842 MsG0780038269.01.T01:CDS 40.0%
AGACTCCAAATGGTGCAAAA+TGG - Chr7:43173097-43173116 MsG0780038269.01.T01:intron 40.0%
AGATATGGTTTGAGAAGGGT+TGG - Chr7:43173148-43173167 MsG0780038269.01.T01:intron 40.0%
AGCCTAAAACACACCAGTTT+GGG + Chr7:43172888-43172907 None:intergenic 40.0%
AGGGTGGAAAAAGTAAATCC+CGG + Chr7:43171205-43171224 None:intergenic 40.0%
ATAGCATTTCACCTTGTGTG+GGG + Chr7:43171607-43171626 None:intergenic 40.0%
CAAAAGAGTTGAAGCTCAGA+AGG - Chr7:43173293-43173312 MsG0780038269.01.T01:intron 40.0%
CAAGCTGAAATGCTATTGCA+GGG - Chr7:43171400-43171419 MsG0780038269.01.T01:intron 40.0%
CAAGGAAATAAACCTCCGAA+TGG - Chr7:43173327-43173346 MsG0780038269.01.T01:intron 40.0%
CAAGGTGAAATGCTATTGCA+GGG - Chr7:43171611-43171630 MsG0780038269.01.T01:intron 40.0%
CAATAGCATTTCACCTTGTG+TGG + Chr7:43171609-43171628 None:intergenic 40.0%
CAATAGCATTTCAGCTTGTG+CGG + Chr7:43171398-43171417 None:intergenic 40.0%
CACATCAGGTACTTATCTAC+TGG + Chr7:43172847-43172866 None:intergenic 40.0%
CTCATGACAACAACAAAGGA+TGG + Chr7:43173829-43173848 None:intergenic 40.0%
CTTGGCTATTGGAGGAAAAT+CGG + Chr7:43172440-43172459 None:intergenic 40.0%
CTTGTGTGGGGTTCATATAA+CGG + Chr7:43171595-43171614 None:intergenic 40.0%
GAGAGGAGATATTCAACTTC+AGG - Chr7:43174384-43174403 MsG0780038269.01.T01:intron 40.0%
GATGATGCCAAGAAAGTTTG+TGG - Chr7:43173035-43173054 MsG0780038269.01.T01:intron 40.0%
GCATTCCGGATTGTATATTC+CGG - Chr7:43171986-43172005 MsG0780038269.01.T01:CDS 40.0%
GCTATGCCAAAATACACATC+AGG + Chr7:43172861-43172880 None:intergenic 40.0%
GGCAAGATATGGTTTGAGAA+GGG - Chr7:43173144-43173163 MsG0780038269.01.T01:intron 40.0%
GGCTTCGTTGAAAACTTTCA+GGG - Chr7:43172239-43172258 MsG0780038269.01.T01:intron 40.0%
GGTTTCCGGAATATACTTTC+CGG + Chr7:43171960-43171979 None:intergenic 40.0%
GTTGTAGAAGGAAGAAGAGA+AGG + Chr7:43172185-43172204 None:intergenic 40.0%
GTTTGTATGAACGGTCAATG+AGG - Chr7:43172261-43172280 MsG0780038269.01.T01:intron 40.0%
TAAAACACACCAGTTTGGGT+TGG + Chr7:43172884-43172903 None:intergenic 40.0%
TAGCCTAAAACACACCAGTT+TGG + Chr7:43172889-43172908 None:intergenic 40.0%
TATGTCCTATCACATAGCAG+TGG - Chr7:43172467-43172486 MsG0780038269.01.T01:intron 40.0%
TATTGCAGGGTTCATAGGAA+CGG - Chr7:43171624-43171643 MsG0780038269.01.T01:intron 40.0%
TCCGGAAGTAACTAACAATC+TGG + Chr7:43171293-43171312 None:intergenic 40.0%
TCTATCAGGATGTGCACTAA+AGG - Chr7:43174439-43174458 MsG0780038269.01.T01:intron 40.0%
TCTTCTTCCTTCTACAACCA+TGG - Chr7:43172187-43172206 MsG0780038269.01.T01:CDS 40.0%
TGCACTCATGACAACAACAA+AGG + Chr7:43173833-43173852 None:intergenic 40.0%
TGGAAAACCATGGTTGTAGA+AGG + Chr7:43172197-43172216 None:intergenic 40.0%
TGGCAAGATATGGTTTGAGA+AGG - Chr7:43173143-43173162 MsG0780038269.01.T01:intron 40.0%
TTACAAGGTTTCCTTGGAGA+AGG + Chr7:43170711-43170730 None:intergenic 40.0%
! AAAACACACCAGTTTGGGTT+GGG + Chr7:43172883-43172902 None:intergenic 40.0%
! AACCCAAACTGGTGTGTTTT+AGG - Chr7:43172883-43172902 MsG0780038269.01.T01:intron 40.0%
! ACAAAAAAGCGCACAACATC+TGG + Chr7:43171330-43171349 None:intergenic 40.0%
! ATGCCATCATAAGGTGTTCT+TGG + Chr7:43170854-43170873 None:intergenic 40.0%
! ATGCGATAATGGTGAACAAG+GGG + Chr7:43171933-43171952 None:intergenic 40.0%
! ATTTAGGAGTGCAGTCCATT+AGG + Chr7:43171056-43171075 None:intergenic 40.0%
! CAACCATGGTTTTCCATCAT+TGG - Chr7:43172201-43172220 MsG0780038269.01.T01:CDS 40.0%
! GAGAGCCATTAATTTGGGTT+TGG + Chr7:43171831-43171850 None:intergenic 40.0%
! GCCATTAATTTGGGTTTGGA+CGG + Chr7:43171827-43171846 None:intergenic 40.0%
! GCTCTACGATTTTCACCATT+CGG + Chr7:43173345-43173364 None:intergenic 40.0%
! GTTTCCTTGGAGAAGGTTTT+GGG + Chr7:43170704-43170723 None:intergenic 40.0%
! TGCCATCATAAGGTGTTCTT+GGG + Chr7:43170853-43170872 None:intergenic 40.0%
!! CTGGTTCGGAAAACAAAATC+CGG + Chr7:43171274-43171293 None:intergenic 40.0%
!! GGGTTTGGAAGGGTATTTAT+AGG + Chr7:43172138-43172157 None:intergenic 40.0%
!! TACATAATGTGGCACTGACA+CGG + Chr7:43174105-43174124 None:intergenic 40.0%
!! TGGAAGGGTATTTATAGGGA+GGG + Chr7:43172133-43172152 None:intergenic 40.0%
!! TTGGAAGGGTATTTATAGGG+AGG + Chr7:43172134-43172153 None:intergenic 40.0%
!!! CTGGTCCGGATTTTATTTTC+CGG + Chr7:43171311-43171330 None:intergenic 40.0%
!!! TAGTTTTTTAGAGGTGACGG+TGG + Chr7:43171668-43171687 None:intergenic 40.0%
AATAAGGCCGAGTGAGACAA+CGG + Chr7:43171109-43171128 None:intergenic 45.0%
ACACGGACATGTCTCTAACA+AGG + Chr7:43174002-43174021 None:intergenic 45.0%
ACATGGAAAGTCGCAAAAGG+TGG - Chr7:43173440-43173459 MsG0780038269.01.T01:intron 45.0%
ACCACTGTCAAAAACGTGTG+GGG + Chr7:43172041-43172060 None:intergenic 45.0%
ACGTTCCGGAATACGAAATC+CGG - Chr7:43172728-43172747 MsG0780038269.01.T01:intron 45.0%
AGAAGAAACAAATGCCCCTG+AGG + Chr7:43172392-43172411 None:intergenic 45.0%
AGAAGGAAGAAGAGAAGGAG+AGG + Chr7:43172180-43172199 None:intergenic 45.0%
AGAGGTGAAGTGAAGAATGG+AGG - Chr7:43171714-43171733 MsG0780038269.01.T01:intron 45.0%
ATAGCAGTGGTTAGGCTCTT+AGG - Chr7:43172480-43172499 MsG0780038269.01.T01:intron 45.0%
ATAGCATTTCAGCTTGTGCG+GGG + Chr7:43171396-43171415 None:intergenic 45.0%
ATCCCGGAGTTATCCGTATT+AGG + Chr7:43171189-43171208 None:intergenic 45.0%
ATGGTGAACAAGGGGAAAGT+TGG + Chr7:43171925-43171944 None:intergenic 45.0%
CATAGCAGTAGCTTGGCTAT+TGG + Chr7:43172451-43172470 None:intergenic 45.0%
CATGGCTAGTGAAATTGCTG+AGG - Chr7:43170645-43170664 MsG0780038269.01.T01:CDS 45.0%
CCTAACCACTGCTATGTGAT+AGG + Chr7:43172475-43172494 None:intergenic 45.0%
CCTATCACATAGCAGTGGTT+AGG - Chr7:43172472-43172491 MsG0780038269.01.T01:intron 45.0%
CGTTATATGAACCCCACACA+AGG - Chr7:43171593-43171612 MsG0780038269.01.T01:intron 45.0%
CGTTGAACACCACTTTCTTC+CGG - Chr7:43173858-43173877 MsG0780038269.01.T01:intron 45.0%
CTCAGATGACAAGGTAAGGT+AGG + Chr7:43170988-43171007 None:intergenic 45.0%
CTTACCCAAAACCTTCTCCA+AGG - Chr7:43170697-43170716 MsG0780038269.01.T01:CDS 45.0%
CTTGTGCGGGGTTCATATAA+CGG + Chr7:43171384-43171403 None:intergenic 45.0%
GAAAGTTGGCACTTCCTGTA+GGG + Chr7:43171911-43171930 None:intergenic 45.0%
GAAGAAACAAATGCCCCTGA+GGG + Chr7:43172391-43172410 None:intergenic 45.0%
GACCACTGTCAAAAACGTGT+GGG + Chr7:43172042-43172061 None:intergenic 45.0%
GATAGGACATAGCAGTAGCT+TGG + Chr7:43172458-43172477 None:intergenic 45.0%
GCGTTCCGGAATATACAATC+CGG + Chr7:43171994-43172013 None:intergenic 45.0%
GGGCTTCGTTGAAAACTTTC+AGG - Chr7:43172238-43172257 MsG0780038269.01.T01:intron 45.0%
GGGGCCTTAGAGATATTTCT+GGG + Chr7:43171167-43171186 None:intergenic 45.0%
GGTCTGCTAGGTATTCTATC+AGG - Chr7:43174425-43174444 MsG0780038269.01.T01:intron 45.0%
GTATGAACGGTCAATGAGGA+TGG - Chr7:43172265-43172284 MsG0780038269.01.T01:intron 45.0%
GTCCCAAGAACACCTTATGA+TGG - Chr7:43170848-43170867 MsG0780038269.01.T01:CDS 45.0%
GTTCTTAGCTTCGCCTGTTT+GGG - Chr7:43172340-43172359 MsG0780038269.01.T01:intron 45.0%
GTTGGAAGACTCAGATGACA+AGG + Chr7:43170997-43171016 None:intergenic 45.0%
TACAATCCGGAATGCACCTT+TGG + Chr7:43171981-43172000 None:intergenic 45.0%
TATTGGAGGAAAATCGGAGG+AGG + Chr7:43172434-43172453 None:intergenic 45.0%
TCCCGGAGTTATCCGTATTA+GGG + Chr7:43171188-43171207 None:intergenic 45.0%
TGAACTCACAAGTGGATGGA+AGG - Chr7:43174471-43174490 MsG0780038269.01.T01:intron 45.0%
TGACCACTGTCAAAAACGTG+TGG + Chr7:43172043-43172062 None:intergenic 45.0%
! AATCCAATGCTGAAGCGTTC+CGG - Chr7:43171860-43171879 MsG0780038269.01.T01:CDS 45.0%
! AGAAATGGTGGGGTTTGGAA+GGG + Chr7:43172148-43172167 None:intergenic 45.0%
! AGGCATGGTGTTAGAAATGG+TGG + Chr7:43172160-43172179 None:intergenic 45.0%
! AGGCCAATGATGGAAAACCA+TGG + Chr7:43172207-43172226 None:intergenic 45.0%
! CTACGATTTTCACCATTCGG+AGG + Chr7:43173342-43173361 None:intergenic 45.0%
! GAGAGGCATGGTGTTAGAAA+TGG + Chr7:43172163-43172182 None:intergenic 45.0%
! GCATGGTGTTAGAAATGGTG+GGG + Chr7:43172158-43172177 None:intergenic 45.0%
! GCGTTCCGGATTTTACATTC+CGG - Chr7:43171874-43171893 MsG0780038269.01.T01:CDS 45.0%
! GGCATGGTGTTAGAAATGGT+GGG + Chr7:43172159-43172178 None:intergenic 45.0%
! GGGCCTTAGAGATATTTCTG+GGG + Chr7:43171166-43171185 None:intergenic 45.0%
! GGTTTCCTTGGAGAAGGTTT+TGG + Chr7:43170705-43170724 None:intergenic 45.0%
! GTGTTAGAAATGGTGGGGTT+TGG + Chr7:43172153-43172172 None:intergenic 45.0%
! TAGAAATGGTGGGGTTTGGA+AGG + Chr7:43172149-43172168 None:intergenic 45.0%
! TTCCAATTTTACCCCTGGTC+CGG + Chr7:43172750-43172769 None:intergenic 45.0%
!! AGGTGTTGAATGGGAGAGTT+TGG - Chr7:43174404-43174423 MsG0780038269.01.T01:intron 45.0%
!! ATCTCTAAGGCCCCCTAATA+CGG - Chr7:43171173-43171192 MsG0780038269.01.T01:intron 45.0%
!! GGAAGGGTATTTATAGGGAG+GGG + Chr7:43172132-43172151 None:intergenic 45.0%
!! TGGATGGAAGGCATTTGCAA+AGG - Chr7:43174483-43174502 MsG0780038269.01.T01:intron 45.0%
!!! TAGTTTTTTAGGGGTGTCGG+TGG + Chr7:43171457-43171476 None:intergenic 45.0%
!! TTAATTAATTGAAATATTAT+AGG - Chr7:43174189-43174208 MsG0780038269.01.T01:intron 5.0%
AAAGCGCACAACATCTGGTC+CGG + Chr7:43171325-43171344 None:intergenic 50.0%
AACGAATGGCGGTTCATCTG+AGG - Chr7:43172299-43172318 MsG0780038269.01.T01:intron 50.0%
AATCCGGAACGCTTCAGCAT+TGG + Chr7:43171866-43171885 None:intergenic 50.0%
ACGAATGGCGGTTCATCTGA+GGG - Chr7:43172300-43172319 MsG0780038269.01.T01:intron 50.0%
AGCAGTAGCTTGGCTATTGG+AGG + Chr7:43172448-43172467 None:intergenic 50.0%
AGGGGTGGGTGAAAATGGTT+GGG + Chr7:43172114-43172133 None:intergenic 50.0%
ATAAGGCCGAGTGAGACAAC+GGG + Chr7:43171108-43171127 None:intergenic 50.0%
ATCCGGACCAGGGGTAAAAT+TGG - Chr7:43172745-43172764 MsG0780038269.01.T01:intron 50.0%
ATGGGAGAGTTTGGTCTGCT+AGG - Chr7:43174413-43174432 MsG0780038269.01.T01:intron 50.0%
CAGAAGGTCTCCAATGGTCA+AGG - Chr7:43173309-43173328 MsG0780038269.01.T01:intron 50.0%
CCCCCTAATACGGATAACTC+CGG - Chr7:43171183-43171202 MsG0780038269.01.T01:intron 50.0%
CCCCTAATACGGATAACTCC+GGG - Chr7:43171184-43171203 MsG0780038269.01.T01:intron 50.0%
CCCGGAGTTATCCGTATTAG+GGG + Chr7:43171187-43171206 None:intergenic 50.0%
CCGGAGTTATCCGTATTAGG+GGG + Chr7:43171186-43171205 None:intergenic 50.0%
CTGGTCCGGATTTCGTATTC+CGG + Chr7:43172736-43172755 None:intergenic 50.0%
CTGTAGGGCTAAGGACATTC+CGG + Chr7:43171896-43171915 None:intergenic 50.0%
GAAAAAAAATAGGGCGCGCG+AGG - Chr7:43172767-43172786 MsG0780038269.01.T01:intron 50.0%
GAAGAAGAGAAGGAGAGGCA+TGG + Chr7:43172175-43172194 None:intergenic 50.0%
GAAGCTCAGAAGGTCTCCAA+TGG - Chr7:43173303-43173322 MsG0780038269.01.T01:intron 50.0%
GAATACGAAATCCGGACCAG+GGG - Chr7:43172736-43172755 MsG0780038269.01.T01:intron 50.0%
GGAAAGTTGGCACTTCCTGT+AGG + Chr7:43171912-43171931 None:intergenic 50.0%
GGAATACGAAATCCGGACCA+GGG - Chr7:43172735-43172754 MsG0780038269.01.T01:intron 50.0%
GGCTATTGGAGGAAAATCGG+AGG + Chr7:43172437-43172456 None:intergenic 50.0%
GGGGGCCTTAGAGATATTTC+TGG + Chr7:43171168-43171187 None:intergenic 50.0%
GGGTATTTATAGGGAGGGGT+GGG + Chr7:43172128-43172147 None:intergenic 50.0%
GGTTCATCTGAGGGTCATGT+GGG - Chr7:43172309-43172328 MsG0780038269.01.T01:intron 50.0%
GGTTCTTAGCTTCGCCTGTT+TGG - Chr7:43172339-43172358 MsG0780038269.01.T01:intron 50.0%
TGCAGCTTACCGGAAGAAAG+TGG + Chr7:43173870-43173889 None:intergenic 50.0%
TTTGGCCAGGGGAATTTGTG+TGG - Chr7:43172935-43172954 MsG0780038269.01.T01:intron 50.0%
! AGGGTATTTATAGGGAGGGG+TGG + Chr7:43172129-43172148 None:intergenic 50.0%
! CGGAAACCAAAGGTGCATTC+CGG - Chr7:43171972-43171991 MsG0780038269.01.T01:CDS 50.0%
! CGGAATGCACCTTTGGTTTC+CGG + Chr7:43171974-43171993 None:intergenic 50.0%
! GAGCATCACTCTCTAGCTCA+TGG - Chr7:43173183-43173202 MsG0780038269.01.T01:intron 50.0%
AAACGTGTGGGGCAAACCAC+CGG + Chr7:43172030-43172049 None:intergenic 55.0%
AAATCGGAGGAGGAGGGAAG+AGG + Chr7:43172424-43172443 None:intergenic 55.0%
AAATGCCCCTGAGGGATGTG+GGG + Chr7:43172383-43172402 None:intergenic 55.0%
ACAAATGCCCCTGAGGGATG+TGG + Chr7:43172385-43172404 None:intergenic 55.0%
CAAATGCCCCTGAGGGATGT+GGG + Chr7:43172384-43172403 None:intergenic 55.0%
CAGCTCCACACAAATTCCCC+TGG + Chr7:43172943-43172962 None:intergenic 55.0%
CGGAATACGAAATCCGGACC+AGG - Chr7:43172734-43172753 MsG0780038269.01.T01:intron 55.0%
CGGAATGTCCTTAGCCCTAC+AGG - Chr7:43171894-43171913 MsG0780038269.01.T01:CDS 55.0%
CGGTTCATCTGAGGGTCATG+TGG - Chr7:43172308-43172327 MsG0780038269.01.T01:intron 55.0%
GAGGGGTGGGTGAAAATGGT+TGG + Chr7:43172115-43172134 None:intergenic 55.0%
GCTCAGACTTACGCCCAAAC+AGG + Chr7:43172356-43172375 None:intergenic 55.0%
GGAGGAAAATCGGAGGAGGA+GGG + Chr7:43172430-43172449 None:intergenic 55.0%
GGCGCGCGAGGAAAAACATA+GGG - Chr7:43172779-43172798 MsG0780038269.01.T01:intron 55.0%
GTCCATCCCGTTGTCTCACT+CGG - Chr7:43171099-43171118 MsG0780038269.01.T01:intron 55.0%
TAGGGAGGGGTGGGTGAAAA+TGG + Chr7:43172119-43172138 None:intergenic 55.0%
TGGAGGAAAATCGGAGGAGG+AGG + Chr7:43172431-43172450 None:intergenic 55.0%
TGGCACTTCCTGTAGGGCTA+AGG + Chr7:43171905-43171924 None:intergenic 55.0%
TGGCATAGCCCAACCCAAAC+TGG - Chr7:43172872-43172891 MsG0780038269.01.T01:intron 55.0%
! GCCCCACACGTTTTTGACAG+TGG - Chr7:43172037-43172056 MsG0780038269.01.T01:CDS 55.0%
! TAGAGGTGACGGTGGTGTCA+TGG + Chr7:43171660-43171679 None:intergenic 55.0%
AACCGCCATTCGTTGCAGCG+CGG + Chr7:43172293-43172312 None:intergenic 60.0%
AACCGCGCTGCAACGAATGG+CGG - Chr7:43172288-43172307 MsG0780038269.01.T01:intron 60.0%
AATGCCCCTGAGGGATGTGG+GGG + Chr7:43172382-43172401 None:intergenic 60.0%
GAACGCATCAGCGTCATGGC+CGG - Chr7:43172008-43172027 MsG0780038269.01.T01:CDS 60.0%
GAGGGTCATGTGGGTCAGTG+TGG - Chr7:43172318-43172337 MsG0780038269.01.T01:intron 60.0%
GCCATGACGCTGATGCGTTC+CGG + Chr7:43172008-43172027 None:intergenic 60.0%
GGGCGCGCGAGGAAAAACAT+AGG - Chr7:43172778-43172797 MsG0780038269.01.T01:intron 60.0%
TCCGGAACGCATCAGCGTCA+TGG - Chr7:43172004-43172023 MsG0780038269.01.T01:CDS 60.0%
TGGAACCGCGCTGCAACGAA+TGG - Chr7:43172285-43172304 MsG0780038269.01.T01:intron 60.0%
! TTTTTGCAGGGCGCGCGAGA+AGG + Chr7:43171232-43171251 None:intergenic 60.0%
!! TAGGGGTGTCGGTGGTGTCA+TGG + Chr7:43171449-43171468 None:intergenic 60.0%
AGGAGGAGGGAAGAGGAGGG+CGG + Chr7:43172417-43172436 None:intergenic 65.0%
ATGCCCCTGAGGGATGTGGG+GGG + Chr7:43172381-43172400 None:intergenic 65.0%
CGGAGGAGGAGGGAAGAGGA+GGG + Chr7:43172420-43172439 None:intergenic 65.0%
GGCCGAGTGAGACAACGGGA+TGG + Chr7:43171104-43171123 None:intergenic 65.0%
TCGGAGGAGGAGGGAAGAGG+AGG + Chr7:43172421-43172440 None:intergenic 65.0%
AGCACCCCCCCACATCCCTC+AGG - Chr7:43172373-43172392 MsG0780038269.01.T01:intron 70.0%
AGGGCGCGCGAGAAGGCAGT+AGG + Chr7:43171225-43171244 None:intergenic 70.0%
CACCCCCCCACATCCCTCAG+GGG - Chr7:43172375-43172394 MsG0780038269.01.T01:intron 70.0%
CGCATCAGCGTCATGGCCGG+TGG - Chr7:43172011-43172030 MsG0780038269.01.T01:CDS 70.0%
CGCGCGAGAAGGCAGTAGGG+TGG + Chr7:43171221-43171240 None:intergenic 70.0%
GCACCCCCCCACATCCCTCA+GGG - Chr7:43172374-43172393 MsG0780038269.01.T01:intron 70.0%
GGAGGAGGGAAGAGGAGGGC+GGG + Chr7:43172416-43172435 None:intergenic 70.0%
GGGCGCGCGAGAAGGCAGTA+GGG + Chr7:43171224-43171243 None:intergenic 70.0%
TGCCCCTGAGGGATGTGGGG+GGG + Chr7:43172380-43172399 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr7 gene 43170640 43174642 43170640 ID=MsG0780038269.01;Name=MsG0780038269.01
Chr7 mRNA 43170640 43174642 43170640 ID=MsG0780038269.01.T01;Parent=MsG0780038269.01;Name=MsG0780038269.01.T01;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|0.66|0.75|4|0|324
Chr7 exon 43174556 43174642 43174556 ID=MsG0780038269.01.T01:exon:7795;Parent=MsG0780038269.01.T01
Chr7 exon 43171790 43172246 43171790 ID=MsG0780038269.01.T01:exon:7794;Parent=MsG0780038269.01.T01
Chr7 exon 43171403 43171527 43171403 ID=MsG0780038269.01.T01:exon:7793;Parent=MsG0780038269.01.T01
Chr7 exon 43170640 43170945 43170640 ID=MsG0780038269.01.T01:exon:7792;Parent=MsG0780038269.01.T01
Chr7 CDS 43174556 43174642 43174556 ID=MsG0780038269.01.T01:cds;Parent=MsG0780038269.01.T01
Chr7 CDS 43171790 43172246 43171790 ID=MsG0780038269.01.T01:cds;Parent=MsG0780038269.01.T01
Chr7 CDS 43171403 43171527 43171403 ID=MsG0780038269.01.T01:cds;Parent=MsG0780038269.01.T01
Chr7 CDS 43170640 43170945 43170640 ID=MsG0780038269.01.T01:cds;Parent=MsG0780038269.01.T01
Gene Sequence

>MsG0780038269.01.T01

AAAATCATGGCTAGTGAAATTGCTGAGGTGAAGCCAATCCACTTTTTCAAGATCATACTTACCCAAAACCTTCTCCAAGGAAACCTTATGATGCCAAGAAAGTTTGTGGAAAAATATGGAAGAGGTCTACCAAAAGCTATATGTCTAAAGACTCCAAATGGTGCAAAATGGAAATTAAATTTGGAAAAGAGTGATGGCAAGATATGGTTTGAGAAGGGTTGGAAAGAATTTGCAGAGCATCACTCTCTAGCTCATGGCCATCTTCTGCTTTTTAGATATGAAAAAACTTCCAAATTTGAGGTACAAATCTTTGGAAAGAGTGCTTTGGAGATAGACTACTCTATCAAAAGAGTTGAAGCTCAGAAGGTCTCCAATGGTCAAGGAAATAAACCTCCGAATGGTGAAAATCGTAGAGCAGCTCAAAAAAGAAAAGATAACTCGTCCTTTGAATTTCACCAACAATGTGAAATTGGAAGCATTAGTTGTGTAAAACATGGAAAGTCGCAAAAGGTGGATGTACATCAAATTGATAGAATGTCCAAAGGAAAACAAGTGATTACAACTGTTGAGAAAGTTACAACTCTTGAAAGAGCATTGTCTTTCAAAATCTATAATCCATCCTTTGTTGTTGTCATGAGTGCATCATACGTTGAACACCACTTTCTTCCGAATATACCATCCTTGTTTTGTAAGACACACTTTGATTTGAATAAGAAGAGAGGAGATATTCAACTTCAGGTGTTGAATGGGAGAGTTTGGTCTGCTAGGTATTCTATCAGGATGTGCACTAAAGGACTAAAATTTGAACTCACAAGTGGATGGAAGGCATTTGCAAAGGACAATAACTTGAAAGTTGGTGATGTTTGCAAATTTGAGCTCATCTCTAGCACTATACTTACCTTCATTGTTCATATCTTTAGAGAGACAGACAATGACAACACAAATTGTTTAACATTTCAGAGTAGGATCAATTGA
Protein sequence

>MsG0780038269.01.T01

KIMASEIAEVKPIHFFKIILTQNLLQGNLMMPRKFVEKYGRGLPKAICLKTPNGAKWKLNLEKSDGKIWFEKGWKEFAEHHSLAHGHLLLFRYEKTSKFEVQIFGKSALEIDYSIKRVEAQKVSNGQGNKPPNGENRRAAQKRKDNSSFEFHQQCEIGSISCVKHGKSQKVDVHQIDRMSKGKQVITTVEKVTTLERALSFKIYNPSFVVVMSASYVEHHFLPNIPSLFCKTHFDLNKKRGDIQLQVLNGRVWSARYSIRMCTKGLKFELTSGWKAFAKDNNLKVGDVCKFELISSTILTFIVHIFRETDNDNTNCLTFQSRIN*