AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038789.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038789.01.T01 MTR_7g062220 94.595 296 16 0 1 296 1 296 0.0 585
MsG0780038789.01.T01 MTR_5g043880 41.509 159 74 5 124 273 124 272 1.57e-25 102
MsG0780038789.01.T01 MTR_4g094588 71.930 57 16 0 124 180 178 234 3.00e-23 97.8
MsG0780038789.01.T01 MTR_2g033820 52.941 85 29 1 124 197 203 287 1.05e-22 97.1
MsG0780038789.01.T01 MTR_7g109800 38.217 157 72 5 124 268 145 288 1.97e-22 94.7
MsG0780038789.01.T01 MTR_1g086790 66.667 57 19 0 124 180 158 214 4.23e-22 94.4
MsG0780038789.01.T01 MTR_1g015140 64.912 57 20 0 124 180 102 158 9.70e-22 89.7
MsG0780038789.01.T01 MTR_5g091390 66.667 57 19 0 124 180 157 213 2.51e-21 92.0
MsG0780038789.01.T01 MTR_8g092140 64.912 57 20 0 124 180 160 216 3.66e-21 90.1
MsG0780038789.01.T01 MTR_3g104750 63.158 57 21 0 124 180 104 160 3.72e-21 88.2
MsG0780038789.01.T01 MTR_3g095040 61.404 57 22 0 124 180 118 174 8.47e-21 88.6
MsG0780038789.01.T01 MTR_3g031220 64.912 57 20 0 124 180 365 421 8.81e-21 92.4
MsG0780038789.01.T01 MTR_3g031220 59.649 57 22 1 124 180 198 253 1.13e-14 74.3
MsG0780038789.01.T01 MTR_5g094430 63.158 57 21 0 124 180 252 308 1.08e-20 91.7
MsG0780038789.01.T01 MTR_5g094430 57.895 57 23 1 124 180 88 143 1.95e-13 70.5
MsG0780038789.01.T01 MTR_5g094430 63.158 57 21 0 124 180 230 286 1.13e-20 91.7
MsG0780038789.01.T01 MTR_5g094430 57.895 57 23 1 124 180 66 121 2.49e-13 70.1
MsG0780038789.01.T01 MTR_7g028415 61.404 57 22 0 124 180 93 149 1.18e-20 87.0
MsG0780038789.01.T01 MTR_7g028710 61.404 57 22 0 124 180 93 149 1.18e-20 87.0
MsG0780038789.01.T01 MTR_5g094430 63.158 57 21 0 124 180 364 420 1.31e-20 92.0
MsG0780038789.01.T01 MTR_5g094430 57.895 57 23 1 124 180 200 255 2.38e-13 70.5
MsG0780038789.01.T01 MTR_3g095080 64.912 57 20 0 124 180 168 224 1.39e-20 89.0
MsG0780038789.01.T01 MTR_3g095080 64.912 57 20 0 124 180 144 200 1.47e-20 88.2
MsG0780038789.01.T01 MTR_5g042920 62.712 59 22 0 122 180 318 376 1.73e-20 91.3
MsG0780038789.01.T01 MTR_5g042920 59.322 59 23 1 123 181 150 207 9.79e-15 74.3
MsG0780038789.01.T01 MTR_3g056100 63.158 57 21 0 124 180 402 458 1.88e-20 91.7
MsG0780038789.01.T01 MTR_3g056100 45.882 85 38 2 103 180 215 298 1.17e-13 71.6
MsG0780038789.01.T01 MTR_3g056100 63.158 57 21 0 124 180 415 471 1.89e-20 91.7
MsG0780038789.01.T01 MTR_3g056100 45.882 85 38 2 103 180 215 298 1.20e-13 71.6
MsG0780038789.01.T01 MTR_3g056100 63.158 57 21 0 124 180 258 314 1.98e-20 91.3
MsG0780038789.01.T01 MTR_3g056100 45.882 85 38 2 103 180 71 154 1.70e-13 70.9
MsG0780038789.01.T01 MTR_3g056100 63.158 57 21 0 124 180 271 327 2.10e-20 91.3
MsG0780038789.01.T01 MTR_3g056100 45.882 85 38 2 103 180 71 154 1.66e-13 70.9
MsG0780038789.01.T01 MTR_7g079010 63.158 57 21 0 124 180 141 197 2.45e-20 87.4
MsG0780038789.01.T01 MTR_4g122530 61.017 59 23 0 124 182 208 266 5.85e-20 89.7
MsG0780038789.01.T01 MTR_5g074400 63.158 57 21 0 124 180 420 476 1.10e-19 89.4
MsG0780038789.01.T01 MTR_5g074400 63.158 57 20 1 124 180 243 298 5.10e-16 78.6
MsG0780038789.01.T01 MTR_3g009470 46.226 106 44 3 124 223 495 593 1.23e-19 89.4
MsG0780038789.01.T01 MTR_3g009470 51.429 70 33 1 115 184 271 339 3.07e-14 73.2
MsG0780038789.01.T01 MTR_7g011820 61.017 59 23 0 122 180 408 466 1.34e-19 89.0
MsG0780038789.01.T01 MTR_7g011820 56.667 60 21 2 123 180 227 283 3.67e-13 70.1
MsG0780038789.01.T01 MTR_4g082580 59.322 59 24 0 122 180 276 334 4.47e-19 86.7
MsG0780038789.01.T01 MTR_4g082580 31.333 150 89 5 34 180 63 201 2.44e-15 75.9
MsG0780038789.01.T01 MTR_8g092010 55.932 59 26 0 122 180 106 164 4.49e-19 83.2
MsG0780038789.01.T01 MTR_8g007270 49.438 89 41 1 96 180 122 210 5.42e-19 84.0
MsG0780038789.01.T01 MTR_5g097490 57.377 61 26 0 120 180 248 308 8.63e-19 85.9
MsG0780038789.01.T01 MTR_4g130900 48.684 76 38 1 106 180 340 415 1.65e-18 85.9
MsG0780038789.01.T01 MTR_3g106060 33.918 171 92 6 41 208 72 224 1.68e-18 84.0
MsG0780038789.01.T01 MTR_7g100510 60.714 56 22 0 125 180 362 417 3.15e-18 84.7
MsG0780038789.01.T01 MTR_7g100510 58.929 56 22 1 125 180 190 244 1.30e-13 71.2
MsG0780038789.01.T01 MTR_1g009613 50.667 75 33 2 110 180 245 319 3.34e-18 84.0
MsG0780038789.01.T01 MTR_7g071120 59.649 57 23 0 124 180 324 380 4.40e-18 84.3
MsG0780038789.01.T01 MTR_7g071120 61.017 59 18 2 124 180 166 221 9.19e-16 77.8
MsG0780038789.01.T01 MTR_1g070455 49.367 79 36 2 110 184 276 354 7.49e-18 83.2
MsG0780038789.01.T01 MTR_4g013260 59.649 57 23 0 124 180 336 392 1.57e-17 82.8
MsG0780038789.01.T01 MTR_4g013260 59.649 57 23 0 124 180 184 240 3.72e-17 81.6
MsG0780038789.01.T01 MTR_7g109600 57.576 66 27 1 116 180 45 110 2.36e-17 80.5
MsG0780038789.01.T01 MTR_7g080020 57.895 57 24 0 124 180 493 549 2.38e-17 82.8
MsG0780038789.01.T01 MTR_7g080020 54.839 62 27 1 119 180 275 335 2.62e-13 70.5
MsG0780038789.01.T01 MTR_7g080000 57.895 57 24 0 124 180 432 488 2.82e-17 82.4
MsG0780038789.01.T01 MTR_7g080000 53.571 56 25 1 125 180 235 289 2.17e-11 64.7
MsG0780038789.01.T01 MTR_8g096730 50.877 57 28 0 124 180 70 126 3.17e-17 77.4
MsG0780038789.01.T01 MTR_4g127040 36.220 127 69 4 64 180 178 302 3.48e-17 80.5
MsG0780038789.01.T01 MTR_1g013760 49.333 75 37 1 125 198 141 215 3.74e-17 80.1
MsG0780038789.01.T01 MTR_8g087000 50.633 79 37 2 107 184 60 137 9.03e-17 78.6
MsG0780038789.01.T01 MTR_3g108960 43.373 83 43 2 106 184 293 375 9.78e-17 80.1
MsG0780038789.01.T01 MTR_8g087000 50.633 79 37 2 107 184 59 136 1.12e-16 78.2
MsG0780038789.01.T01 MTR_0117s0040 43.182 88 44 3 99 180 44 131 1.27e-16 77.8
MsG0780038789.01.T01 MTR_8g028565 48.718 78 37 2 106 182 139 214 1.47e-16 79.0
MsG0780038789.01.T01 MTR_6g053200 44.872 78 42 1 104 180 310 387 2.16e-16 79.7
MsG0780038789.01.T01 MTR_5g016610 45.570 79 39 2 106 180 178 256 2.58e-16 77.4
MsG0780038789.01.T01 MTR_2g032030 41.584 101 52 2 87 180 224 324 2.93e-16 79.0
MsG0780038789.01.T01 MTR_4g094908 45.570 79 39 2 106 180 245 323 3.14e-16 78.2
MsG0780038789.01.T01 MTR_2g105060 52.632 57 26 1 125 180 95 151 4.09e-16 76.6
MsG0780038789.01.T01 MTR_2g105060 52.632 57 26 1 125 180 170 226 4.95e-16 77.4
MsG0780038789.01.T01 MTR_2g032030 42.268 97 49 2 91 180 228 324 5.54e-16 78.2
MsG0780038789.01.T01 MTR_1g077780 54.237 59 27 0 122 180 60 118 7.56e-16 73.6
MsG0780038789.01.T01 MTR_1g099600 53.968 63 28 1 119 180 180 242 8.21e-16 76.6
MsG0780038789.01.T01 MTR_8g099350 32.000 150 90 5 36 178 45 189 1.34e-15 76.6
MsG0780038789.01.T01 MTR_1g078260 56.897 58 24 1 124 180 247 304 1.38e-15 77.0
MsG0780038789.01.T01 MTR_6g086555 55.172 58 25 1 124 180 206 263 1.42e-15 76.6
MsG0780038789.01.T01 MTR_2g016770 54.098 61 27 1 125 184 36 96 2.22e-15 73.9
MsG0780038789.01.T01 MTR_4g107970 58.621 58 23 1 124 180 178 235 2.58e-15 76.3
MsG0780038789.01.T01 MTR_2g088000 42.857 91 48 3 95 184 323 410 2.81e-15 76.3
MsG0780038789.01.T01 MTR_4g107970 58.621 58 23 1 124 180 255 312 3.00e-15 76.3
MsG0780038789.01.T01 MTR_2g016770 54.098 61 27 1 125 184 28 88 3.06e-15 73.6
MsG0780038789.01.T01 MTR_7g009730 48.611 72 35 2 110 180 206 276 3.69e-15 75.9
MsG0780038789.01.T01 MTR_3g053330 54.098 61 27 1 125 184 252 312 3.92e-15 75.9
MsG0780038789.01.T01 MTR_8g098945 53.226 62 28 1 120 180 125 186 6.40e-15 73.6
MsG0780038789.01.T01 MTR_4g132430 56.897 58 24 1 124 180 127 184 6.56e-15 74.7
MsG0780038789.01.T01 MTR_3g031220 59.649 57 22 1 124 180 198 253 7.32e-15 74.7
MsG0780038789.01.T01 MTR_4g094412 47.222 72 36 2 110 180 221 291 7.65e-15 74.7
MsG0780038789.01.T01 MTR_7g079040 39.130 115 65 3 122 231 152 266 7.77e-15 73.9
MsG0780038789.01.T01 MTR_4g094412 47.222 72 36 2 110 180 230 300 8.14e-15 74.7
MsG0780038789.01.T01 MTR_2g083870 57.895 57 23 1 125 180 81 137 8.75e-15 73.2
MsG0780038789.01.T01 MTR_7g110720 45.556 90 33 2 92 180 199 273 9.34e-15 74.3
MsG0780038789.01.T01 MTR_7g110720 45.556 90 33 2 92 180 172 246 1.01e-14 74.3
MsG0780038789.01.T01 MTR_4g132430 56.897 58 24 1 124 180 261 318 1.17e-14 74.3
MsG0780038789.01.T01 MTR_2g023930 38.938 113 52 3 70 180 265 362 1.27e-14 74.3
MsG0780038789.01.T01 MTR_3g090860 57.377 61 23 1 121 178 130 190 1.35e-14 73.6
MsG0780038789.01.T01 MTR_4g007060 52.632 57 26 1 125 180 129 185 2.44e-14 72.0
MsG0780038789.01.T01 MTR_3g009470 51.429 70 33 1 115 184 271 339 2.91e-14 73.2
MsG0780038789.01.T01 MTR_4g007060 52.632 57 26 1 125 180 163 219 3.14e-14 72.0
MsG0780038789.01.T01 MTR_5g067680 52.542 59 25 1 124 179 202 260 3.55e-14 72.4
MsG0780038789.01.T01 MTR_2g024380 50.000 76 32 3 122 192 249 323 5.44e-14 72.4
MsG0780038789.01.T01 MTR_8g067635 52.381 63 29 1 119 180 344 406 6.97e-14 72.0
MsG0780038789.01.T01 MTR_2g024350 53.333 60 27 1 122 180 6 65 7.01e-14 70.1
MsG0780038789.01.T01 MTR_1g013790 50.877 57 27 1 125 180 102 158 7.81e-14 70.5
MsG0780038789.01.T01 MTR_8g067650 53.333 60 27 1 122 180 337 396 4.37e-13 69.7
MsG0780038789.01.T01 MTR_2g045360 52.632 57 26 1 125 180 212 268 5.07e-13 69.3
MsG0780038789.01.T01 MTR_7g117200 46.753 77 33 3 110 178 99 175 1.13e-12 67.8
MsG0780038789.01.T01 MTR_8g027860 44.737 76 35 2 110 178 118 193 2.89e-12 66.6
MsG0780038789.01.T01 MTR_8g069935 49.153 59 29 1 123 180 330 388 3.27e-12 67.0
MsG0780038789.01.T01 MTR_5g074200 50.000 58 28 1 124 181 220 276 7.26e-12 65.5
MsG0780038789.01.T01 MTR_4g049760 50.877 57 27 1 125 180 291 347 1.55e-11 65.1
MsG0780038789.01.T01 MTR_2g075610 50.000 60 27 1 122 178 27 86 1.64e-11 62.4
MsG0780038789.01.T01 MTR_8g005750 53.448 58 24 1 124 178 103 160 2.01e-11 63.5
MsG0780038789.01.T01 MTR_0002s1250 51.724 58 25 1 124 178 111 168 2.75e-11 63.2
MsG0780038789.01.T01 MTR_2g075750 50.000 60 27 1 122 178 26 85 4.00e-11 61.2
MsG0780038789.01.T01 MTR_2g075700 49.231 65 30 1 122 183 142 206 5.31e-11 62.8
MsG0780038789.01.T01 MTR_7g073430 51.724 58 25 1 124 178 122 179 8.01e-11 62.0
MsG0780038789.01.T01 MTR_3g093830 52.632 57 24 1 125 178 128 184 8.71e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038789.01.T01 AT5G43290 42.857 259 122 11 30 275 21 266 8.58e-52 171
MsG0780038789.01.T01 AT1G69310 41.558 154 74 4 124 274 147 287 1.99e-28 110
MsG0780038789.01.T01 AT1G69310 41.558 154 74 4 124 274 147 287 1.99e-28 110
MsG0780038789.01.T01 AT1G69310 41.558 154 74 4 124 274 147 287 1.99e-28 110
MsG0780038789.01.T01 AT5G49520 32.597 181 100 3 124 285 221 398 2.05e-24 102
MsG0780038789.01.T01 AT1G69310 38.961 154 74 5 124 274 147 283 5.73e-23 96.3
MsG0780038789.01.T01 AT2G47260 66.102 59 20 0 124 182 174 232 9.26e-23 96.7
MsG0780038789.01.T01 AT4G39410 55.844 77 34 0 124 200 223 299 1.03e-22 95.9
MsG0780038789.01.T01 AT1G29860 68.421 57 18 0 124 180 136 192 2.11e-22 94.7
MsG0780038789.01.T01 AT4G18170 68.421 57 18 0 124 180 172 228 4.36e-22 94.4
MsG0780038789.01.T01 AT1G64000 64.912 57 20 0 124 180 114 170 8.79e-22 90.9
MsG0780038789.01.T01 AT5G46350 66.667 57 19 0 124 180 183 239 2.72e-21 92.4
MsG0780038789.01.T01 AT2G25000 33.702 181 101 7 13 180 29 203 3.57e-21 90.9
MsG0780038789.01.T01 AT2G03340 62.712 59 22 0 122 180 413 471 3.83e-21 93.6
MsG0780038789.01.T01 AT2G03340 45.833 96 40 3 93 180 214 305 6.23e-15 75.1
MsG0780038789.01.T01 AT2G04880 63.077 65 24 0 124 188 283 347 3.93e-21 93.2
MsG0780038789.01.T01 AT2G04880 67.500 40 13 0 124 163 111 150 1.44e-11 65.1
MsG0780038789.01.T01 AT1G13960 62.712 59 22 0 122 180 254 312 4.00e-21 92.4
MsG0780038789.01.T01 AT1G13960 62.069 58 21 1 123 180 75 131 2.94e-15 75.5
MsG0780038789.01.T01 AT2G04880 63.077 65 24 0 124 188 307 371 5.06e-21 93.2
MsG0780038789.01.T01 AT2G04880 67.500 40 13 0 124 163 111 150 1.20e-11 65.5
MsG0780038789.01.T01 AT1G13960 62.712 59 22 0 122 180 407 465 5.41e-21 93.2
MsG0780038789.01.T01 AT1G13960 62.069 58 21 1 123 180 228 284 2.51e-15 76.3
MsG0780038789.01.T01 AT5G41570 63.158 57 21 0 124 180 98 154 8.11e-21 87.8
MsG0780038789.01.T01 AT5G13080 61.404 57 22 0 124 180 67 123 2.32e-20 85.9
MsG0780038789.01.T01 AT5G07100 63.158 57 21 0 124 180 141 197 3.11e-20 87.4
MsG0780038789.01.T01 AT5G07100 39.450 109 48 2 120 228 20 110 1.24e-14 72.0
MsG0780038789.01.T01 AT5G07100 63.158 57 21 0 124 180 141 197 3.11e-20 87.4
MsG0780038789.01.T01 AT5G07100 39.450 109 48 2 120 228 20 110 1.24e-14 72.0
MsG0780038789.01.T01 AT5G07100 63.158 57 21 0 124 180 141 197 3.11e-20 87.4
MsG0780038789.01.T01 AT5G07100 39.450 109 48 2 120 228 20 110 1.24e-14 72.0
MsG0780038789.01.T01 AT5G07100 63.158 57 21 0 124 180 141 197 3.11e-20 87.4
MsG0780038789.01.T01 AT5G07100 39.450 109 48 2 120 228 20 110 1.24e-14 72.0
MsG0780038789.01.T01 AT3G62340 64.912 57 20 0 124 180 118 174 3.16e-20 88.6
MsG0780038789.01.T01 AT2G46130 63.158 57 21 0 124 180 30 86 5.64e-20 83.6
MsG0780038789.01.T01 AT2G25000 36.111 144 76 5 50 180 20 160 6.31e-20 86.7
MsG0780038789.01.T01 AT2G25000 36.111 144 76 5 50 180 20 160 6.31e-20 86.7
MsG0780038789.01.T01 AT2G25000 34.132 167 92 6 27 180 21 182 6.57e-20 87.0
MsG0780038789.01.T01 AT3G01970 59.649 57 23 0 124 180 65 121 7.01e-20 84.3
MsG0780038789.01.T01 AT5G07100 63.158 57 21 0 124 180 234 290 9.47e-20 87.8
MsG0780038789.01.T01 AT5G07100 39.450 109 48 2 120 228 113 203 1.27e-14 73.2
MsG0780038789.01.T01 AT5G56270 63.158 57 21 0 124 180 487 543 1.15e-19 89.7
MsG0780038789.01.T01 AT5G56270 57.576 66 27 1 119 184 268 332 1.93e-16 80.1
MsG0780038789.01.T01 AT3G01080 61.017 59 23 0 122 180 304 362 2.54e-19 87.8
MsG0780038789.01.T01 AT3G01080 58.621 58 23 1 123 180 166 222 2.02e-13 70.5
MsG0780038789.01.T01 AT3G01080 61.017 59 23 0 122 180 342 400 2.74e-19 87.8
MsG0780038789.01.T01 AT3G01080 59.649 57 22 1 124 180 205 260 1.90e-13 70.9
MsG0780038789.01.T01 AT5G26170 57.895 57 24 0 124 180 113 169 3.45e-19 83.6
MsG0780038789.01.T01 AT2G44745 63.793 58 21 0 124 181 145 202 4.32e-19 84.3
MsG0780038789.01.T01 AT4G26640 61.404 57 22 0 124 180 205 261 5.39e-19 86.7
MsG0780038789.01.T01 AT4G26640 59.322 59 23 1 122 180 33 90 4.85e-14 72.0
MsG0780038789.01.T01 AT4G26640 61.404 57 22 0 124 180 205 261 5.39e-19 86.7
MsG0780038789.01.T01 AT4G26640 59.322 59 23 1 122 180 33 90 4.85e-14 72.0
MsG0780038789.01.T01 AT4G26640 61.404 57 22 0 124 180 205 261 5.39e-19 86.7
MsG0780038789.01.T01 AT4G26640 59.322 59 23 1 122 180 33 90 4.85e-14 72.0
MsG0780038789.01.T01 AT4G26640 61.404 57 22 0 124 180 205 261 5.39e-19 86.7
MsG0780038789.01.T01 AT4G26640 59.322 59 23 1 122 180 33 90 4.85e-14 72.0
MsG0780038789.01.T01 AT4G26640 61.404 57 22 0 124 180 341 397 5.55e-19 87.4
MsG0780038789.01.T01 AT4G26640 59.322 59 23 1 122 180 169 226 4.18e-14 72.8
MsG0780038789.01.T01 AT4G26640 61.404 57 22 0 124 180 309 365 5.81e-19 87.0
MsG0780038789.01.T01 AT4G26640 59.322 59 23 1 122 180 137 194 4.38e-14 72.8
MsG0780038789.01.T01 AT4G26640 61.404 57 22 0 124 180 381 437 5.82e-19 87.4
MsG0780038789.01.T01 AT4G26640 59.322 59 23 1 122 180 209 266 4.13e-14 72.8
MsG0780038789.01.T01 AT2G38470 61.404 57 22 0 124 180 362 418 3.38e-18 85.1
MsG0780038789.01.T01 AT2G38470 62.069 58 21 1 123 180 183 239 6.82e-16 78.2
MsG0780038789.01.T01 AT5G64810 54.386 57 26 0 124 180 110 166 5.79e-18 80.5
MsG0780038789.01.T01 AT4G30935 46.835 79 41 1 103 180 309 387 6.12e-18 84.0
MsG0780038789.01.T01 AT4G30935 53.571 56 25 1 125 180 169 223 1.65e-11 64.7
MsG0780038789.01.T01 AT4G31550 50.667 75 33 2 110 180 229 303 6.86e-18 82.8
MsG0780038789.01.T01 AT4G31550 50.667 75 33 2 110 180 228 302 7.20e-18 82.8
MsG0780038789.01.T01 AT4G31800 54.237 59 26 1 125 182 112 170 7.69e-18 81.3
MsG0780038789.01.T01 AT2G21900 54.386 57 26 0 124 180 109 165 8.79e-18 80.5
MsG0780038789.01.T01 AT1G55600 54.098 61 28 0 124 184 307 367 8.86e-18 83.6
MsG0780038789.01.T01 AT2G30250 62.500 56 21 0 125 180 329 384 1.02e-17 83.2
MsG0780038789.01.T01 AT2G30250 56.140 57 24 1 124 180 166 221 1.21e-12 68.2
MsG0780038789.01.T01 AT4G31800 54.237 59 26 1 125 182 177 235 1.40e-17 81.6
MsG0780038789.01.T01 AT2G23320 46.835 79 38 2 106 180 219 297 1.63e-17 81.6
MsG0780038789.01.T01 AT2G34830 41.322 121 59 3 72 180 152 272 1.76e-17 82.4
MsG0780038789.01.T01 AT2G34830 41.322 121 59 3 72 180 161 281 2.12e-17 82.4
MsG0780038789.01.T01 AT2G37260 57.895 57 24 0 124 180 269 325 2.84e-17 81.3
MsG0780038789.01.T01 AT2G37260 58.929 56 22 1 125 180 86 140 3.26e-14 72.4
MsG0780038789.01.T01 AT2G37260 57.895 57 24 0 124 180 267 323 3.08e-17 81.3
MsG0780038789.01.T01 AT2G37260 58.929 56 22 1 125 180 84 138 3.61e-14 72.4
MsG0780038789.01.T01 AT2G37260 57.895 57 24 0 124 180 349 405 3.28e-17 81.6
MsG0780038789.01.T01 AT2G37260 58.929 56 22 1 125 180 166 220 3.25e-14 72.8
MsG0780038789.01.T01 AT5G28650 49.367 79 36 2 106 180 241 319 3.58e-17 80.9
MsG0780038789.01.T01 AT4G26440 56.897 58 25 0 124 181 372 429 4.19e-17 81.6
MsG0780038789.01.T01 AT4G26440 46.154 91 33 2 124 214 178 252 2.77e-16 79.3
MsG0780038789.01.T01 AT2G30590 42.708 96 49 3 93 184 281 374 6.42e-17 80.5
MsG0780038789.01.T01 AT5G52830 60.000 60 23 1 122 180 163 222 9.15e-17 79.7
MsG0780038789.01.T01 AT3G04670 48.101 79 37 2 106 180 241 319 1.33e-16 79.3
MsG0780038789.01.T01 AT1G30650 44.643 112 52 4 78 180 164 274 1.82e-16 79.7
MsG0780038789.01.T01 AT2G24570 49.333 75 34 2 110 180 226 300 2.73e-16 78.2
MsG0780038789.01.T01 AT1G80840 54.386 57 25 1 125 180 147 203 6.28e-16 77.0
MsG0780038789.01.T01 AT1G68150 44.578 83 44 2 99 180 211 292 7.27e-16 77.4
MsG0780038789.01.T01 AT1G29280 57.895 57 23 1 125 180 75 131 9.79e-16 75.9
MsG0780038789.01.T01 AT4G01250 48.718 78 37 2 106 182 112 187 9.99e-16 76.3
MsG0780038789.01.T01 AT1G62300 31.613 155 104 2 28 180 215 369 1.03e-15 77.8
MsG0780038789.01.T01 AT4G24240 41.758 91 47 3 94 180 250 338 2.10e-15 75.9
MsG0780038789.01.T01 AT2G46400 48.148 81 34 2 106 178 81 161 4.45e-15 74.3
MsG0780038789.01.T01 AT5G15130 56.897 58 24 1 124 180 227 284 4.79e-15 75.5
MsG0780038789.01.T01 AT5G15130 56.897 58 24 1 124 180 185 242 4.85e-15 75.5
MsG0780038789.01.T01 AT3G58710 59.649 57 22 1 125 180 72 128 6.43e-15 73.6
MsG0780038789.01.T01 AT3G58710 59.649 57 22 1 125 180 71 127 6.68e-15 73.6
MsG0780038789.01.T01 AT5G45050 46.429 84 42 2 100 180 1126 1209 1.04e-14 75.1
MsG0780038789.01.T01 AT5G45050 46.429 84 42 2 100 180 1154 1237 1.04e-14 75.1
MsG0780038789.01.T01 AT2G46130 56.140 57 21 1 124 180 30 82 1.23e-14 68.9
MsG0780038789.01.T01 AT5G45050 46.429 84 42 2 100 180 1015 1098 1.32e-14 74.7
MsG0780038789.01.T01 AT4G23550 56.140 57 24 1 125 180 141 197 1.68e-14 72.8
MsG0780038789.01.T01 AT4G04450 53.125 64 29 1 125 187 199 262 2.73e-14 73.2
MsG0780038789.01.T01 AT2G40740 54.098 61 25 1 124 181 173 233 2.96e-14 72.0
MsG0780038789.01.T01 AT2G40740 54.098 61 25 1 124 181 182 242 3.48e-14 72.0
MsG0780038789.01.T01 AT1G18860 45.783 83 42 3 99 180 216 296 3.49e-14 73.2
MsG0780038789.01.T01 AT4G04450 53.125 64 29 1 125 187 293 356 4.78e-14 72.8
MsG0780038789.01.T01 AT4G22070 57.895 57 23 1 125 180 298 354 6.49e-14 72.4
MsG0780038789.01.T01 AT4G22070 57.895 57 23 1 125 180 298 354 6.49e-14 72.4
MsG0780038789.01.T01 AT4G22070 57.895 57 23 1 125 180 298 354 6.49e-14 72.4
MsG0780038789.01.T01 AT4G22070 57.895 57 23 1 125 180 298 354 6.49e-14 72.4
MsG0780038789.01.T01 AT3G01080 59.649 57 22 1 124 180 205 260 1.01e-13 70.9
MsG0780038789.01.T01 AT4G01720 55.172 58 25 1 124 180 239 296 4.44e-13 69.7
MsG0780038789.01.T01 AT5G24110 35.897 117 58 4 79 178 54 170 1.23e-12 67.4
MsG0780038789.01.T01 AT4G11070 52.459 61 26 1 121 178 106 166 2.17e-12 66.6
MsG0780038789.01.T01 AT4G11070 52.459 61 26 1 121 178 138 198 2.53e-12 66.6
MsG0780038789.01.T01 AT1G66560 49.153 59 27 1 124 179 103 161 3.21e-12 65.5
MsG0780038789.01.T01 AT5G01900 41.121 107 48 5 125 216 111 217 1.34e-11 63.9
MsG0780038789.01.T01 AT4G23810 50.820 61 27 1 121 178 155 215 1.37e-11 64.7
MsG0780038789.01.T01 AT1G69810 49.153 59 28 2 124 180 203 261 1.72e-11 64.7
MsG0780038789.01.T01 AT2G40750 50.000 58 26 1 124 178 152 209 1.83e-11 64.3
MsG0780038789.01.T01 AT1G69810 49.153 59 28 2 124 180 145 203 2.07e-11 63.9
MsG0780038789.01.T01 AT1G66550 44.444 63 32 1 124 183 103 165 4.12e-11 62.4
MsG0780038789.01.T01 AT1G66550 44.444 63 32 1 124 183 108 170 4.95e-11 62.4

Find 72 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATGAACTTCACTTGCTTTA+TGG 0.118410 7:+53150227 None:intergenic
AGAAACTAATTTCTTGTAAT+TGG 0.207511 7:-53152702 MsG0780038789.01.T01:CDS
TTGTGTACGGTCCAATAAAA+TGG 0.226460 7:+53150141 None:intergenic
TGAAAAGTTTACCTAGGATT+TGG 0.227557 7:+53152201 None:intergenic
CTTCACTTGCTTTATGGTCT+TGG 0.238976 7:+53150233 None:intergenic
TTCATTTCAAATATTTATTC+AGG 0.250036 7:-53152550 MsG0780038789.01.T01:CDS
TTGATGAAAATTGTTGAAAT+TGG 0.253295 7:+53152476 None:intergenic
AGCCCAATCTAGTAATTCTT+TGG 0.285857 7:-53150176 MsG0780038789.01.T01:CDS
ATTGTTGAAATTGGTTACTA+TGG 0.305605 7:+53152485 None:intergenic
AATTACTAGATTGGGCTTCA+TGG 0.316924 7:+53150182 None:intergenic
GAAAAGTTTACCTAGGATTT+GGG 0.326045 7:+53152202 None:intergenic
GATTGTCCCACTATGAAATA+AGG 0.327297 7:+53150319 None:intergenic
TTCACTTGCTTTATGGTCTT+GGG 0.328292 7:+53150234 None:intergenic
GGATATAGGTGGAGGAAGTA+TGG 0.340368 7:-53152246 MsG0780038789.01.T01:CDS
ACTTTGAAAATCAAATGTTT+TGG 0.341685 7:-53152288 MsG0780038789.01.T01:CDS
TTCCAAAGAATTACTAGATT+GGG 0.346671 7:+53150174 None:intergenic
ACCTTTCTCCTCCAGCATAA+TGG 0.348390 7:-53149997 None:intergenic
TCACTATCAACATTGTTTGT+AGG 0.350268 7:+53150049 None:intergenic
AGGATTTGGGCTATTCTTGA+TGG 0.375798 7:+53152215 None:intergenic
AGAAGGGTTGCTTGAAGATA+TGG 0.390745 7:-53150092 MsG0780038789.01.T01:CDS
TGCTTATCCTTATTTCATAG+TGG 0.391267 7:-53150326 MsG0780038789.01.T01:CDS
AAATGAACCTATTAAAAGCT+TGG 0.401637 7:+53152566 None:intergenic
TGGACTTCTTCATTGGTGGA+TGG 0.401908 7:+53150281 None:intergenic
GTTCCAAAGAATTACTAGAT+TGG 0.406024 7:+53150173 None:intergenic
GCTTCTTAGCACCACACCTT+GGG 0.406138 7:+53150416 None:intergenic
CTCCATCATTGTCTTTGACA+TGG 0.406707 7:+53152723 None:intergenic
CACTATCAACATTGTTTGTA+GGG 0.407829 7:+53150050 None:intergenic
TAAGTGATTATGAGAGTGTC+AGG 0.409746 7:+53150370 None:intergenic
GCCTTGGACTTCTTCATTGG+TGG 0.411270 7:+53150277 None:intergenic
TGAAGAATCATGACTTAAGT+TGG 0.411681 7:+53152594 None:intergenic
GATTGGGTGATGATGGATAT+AGG 0.412049 7:-53152260 MsG0780038789.01.T01:CDS
GTAGCCTTGGACTTCTTCAT+TGG 0.412428 7:+53150274 None:intergenic
GATACGGTCCAAGAAAATTT+CGG 0.416624 7:-53150118 MsG0780038789.01.T01:CDS
GGCAATGGATTGGGTGATGA+TGG 0.417116 7:-53152267 MsG0780038789.01.T01:CDS
AGGAGAAAGGTGTGAGGAGA+AGG 0.422919 7:+53150009 None:intergenic
GGACTTCTTCATTGGTGGAT+GGG 0.423548 7:+53150282 None:intergenic
GAGAGTGTCAGGGTCTTCAT+TGG 0.440141 7:+53150381 None:intergenic
TGAAGATATGGTGCCATTCA+TGG 0.441742 7:-53150080 MsG0780038789.01.T01:CDS
TCCTTGTGAAGAGGTAGCCT+TGG 0.445914 7:+53150261 None:intergenic
TCAGAGTTTCTATATTAGAA+AGG 0.451303 7:-53152338 MsG0780038789.01.T01:intron
CAAGAAAATTTCGGCTCAGA+AGG 0.452520 7:-53150109 MsG0780038789.01.T01:CDS
GTAGGGTTTCTAACCATGAA+TGG 0.482456 7:+53150067 None:intergenic
TGTGTACGGTCCAATAAAAT+GGG 0.485883 7:+53150142 None:intergenic
CTTGCTTTATGGTCTTGGGT+TGG 0.490234 7:+53150238 None:intergenic
GCTTATCCTTATTTCATAGT+GGG 0.490566 7:-53150325 MsG0780038789.01.T01:CDS
CTTGGACCGTATCTTGTGTA+CGG 0.501432 7:+53150128 None:intergenic
AAACCAGAAATCCATTATGC+TGG 0.504021 7:+53149986 None:intergenic
CTTAGCACCACACCTTGGGT+TGG 0.505309 7:+53150420 None:intergenic
TCAAGAATAGCCCAAATCCT+AGG 0.505398 7:-53152212 MsG0780038789.01.T01:intron
TCCATTATGCTGGAGGAGAA+AGG 0.508409 7:+53149996 None:intergenic
GAACAAACAGGAGTTACTAT+AGG 0.514245 7:-53150447 MsG0780038789.01.T01:intron
ACTCTCATAATCACTTATGA+AGG 0.527480 7:-53150364 MsG0780038789.01.T01:CDS
ATTGGACCGTACACAAGATA+CGG 0.536511 7:-53150134 MsG0780038789.01.T01:CDS
TGCTTCTTAGCACCACACCT+TGG 0.538042 7:+53150415 None:intergenic
ATCCATGTCAAAGACAATGA+TGG 0.541467 7:-53152725 MsG0780038789.01.T01:CDS
TTGGGTTGGTCCTTGTGAAG+AGG 0.546121 7:+53150252 None:intergenic
AAGGTGTGGTGCTAAGAAGC+AGG 0.570713 7:-53150413 MsG0780038789.01.T01:CDS
AAGGATAAGCAAAGTGCAAG+TGG 0.571322 7:+53150338 None:intergenic
AAGAAAATTTCGGCTCAGAA+GGG 0.589966 7:-53150108 MsG0780038789.01.T01:CDS
AATTTCTTGTAATTGGTCAG+AGG 0.595145 7:-53152695 MsG0780038789.01.T01:CDS
TGCTGGAGGAGAAAGGTGTG+AGG 0.602724 7:+53150003 None:intergenic
CCAGAAATCCATTATGCTGG+AGG 0.607098 7:+53149989 None:intergenic
AAAGCAAGTGAAGTTCATGA+AGG 0.612429 7:-53150223 MsG0780038789.01.T01:CDS
TCATGTGGCAACATAAGAAG+AGG 0.619763 7:+53152634 None:intergenic
TCCAAGGCTACCTCTTCACA+AGG 0.631287 7:-53150262 MsG0780038789.01.T01:CDS
AGGTGCACCAACCCAAGGTG+TGG 0.643144 7:-53150427 MsG0780038789.01.T01:CDS
ACTATAGGTGCACCAACCCA+AGG 0.643448 7:-53150432 MsG0780038789.01.T01:CDS
GTGATGATGGATATAGGTGG+AGG 0.658043 7:-53152254 MsG0780038789.01.T01:CDS
TGGGTGATGATGGATATAGG+TGG 0.674806 7:-53152257 MsG0780038789.01.T01:CDS
ACTTCAGATACTGTCTCATG+TGG 0.675668 7:+53152619 None:intergenic
TCCACCAATGAAGAAGTCCA+AGG 0.685535 7:-53150278 MsG0780038789.01.T01:CDS
AAGTGATTATGAGAGTGTCA+GGG 0.690845 7:+53150371 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAGAGTTAAAATTCTA+AGG - Chr7:53151264-53151283 MsG0780038789.01.T01:intron 15.0%
!! TTCATTTCAAATATTTATTC+AGG - Chr7:53150186-53150205 MsG0780038789.01.T01:CDS 15.0%
!!! ATTTTGCACTTTTATTTTTA+AGG + Chr7:53152053-53152072 None:intergenic 15.0%
!!! GATAAATAGTTGAATATTTT+AGG + Chr7:53151465-53151484 None:intergenic 15.0%
!!! TTTTATAGTTGAATATCAAT+TGG - Chr7:53151382-53151401 MsG0780038789.01.T01:intron 15.0%
!!! TTTTGCACTTTTATTTTTAA+GGG + Chr7:53152052-53152071 None:intergenic 15.0%
!! AACATCGTATAAGATTTATA+AGG + Chr7:53151055-53151074 None:intergenic 20.0%
!! AATGAGTTATACATACAAAA+GGG - Chr7:53152078-53152097 MsG0780038789.01.T01:intron 20.0%
!! AATGCATATATATAGTACTT+TGG - Chr7:53150639-53150658 MsG0780038789.01.T01:intron 20.0%
!! AGAAACTAATTTCTTGTAAT+TGG - Chr7:53150034-53150053 MsG0780038789.01.T01:CDS 20.0%
!! TACTATATATATGCATTAAC+AGG + Chr7:53150636-53150655 None:intergenic 20.0%
!! TTACTCATTAATCATATAGT+CGG + Chr7:53151353-53151372 None:intergenic 20.0%
!! TTGATGAAAATTGTTGAAAT+TGG + Chr7:53150263-53150282 None:intergenic 20.0%
!!! ACTTTGAAAATCAAATGTTT+TGG - Chr7:53150448-53150467 MsG0780038789.01.T01:intron 20.0%
!!! ATATTCAACTATAAAAGTGT+GGG + Chr7:53151378-53151397 None:intergenic 20.0%
!!! ATTAATGGAATTGTCAATTT+TGG + Chr7:53151801-53151820 None:intergenic 20.0%
!!! CATTTTAAGATAACAAAATG+AGG + Chr7:53151130-53151149 None:intergenic 20.0%
!!! TATAAAATTTGAAACTTGCA+AGG + Chr7:53151492-53151511 None:intergenic 20.0%
!!! TTTTTAAACCAATCATACTA+TGG + Chr7:53152121-53152140 None:intergenic 20.0%
! AAATGAACCTATTAAAAGCT+TGG + Chr7:53150173-53150192 None:intergenic 25.0%
! AATCTTCTCAAATTAGCTAA+GGG + Chr7:53152219-53152238 None:intergenic 25.0%
! ATTAGACACATCAAATAAGT+TGG + Chr7:53150359-53150378 None:intergenic 25.0%
! ATTGTTGAAATTGGTTACTA+TGG + Chr7:53150254-53150273 None:intergenic 25.0%
! CAATGAGTTATACATACAAA+AGG - Chr7:53152077-53152096 MsG0780038789.01.T01:intron 25.0%
! GAGAATGAATGACTATTTAA+AGG + Chr7:53151324-53151343 None:intergenic 25.0%
! GATATTCAACTATAAAAGTG+TGG + Chr7:53151379-53151398 None:intergenic 25.0%
! TAATCTTCTCAAATTAGCTA+AGG + Chr7:53152220-53152239 None:intergenic 25.0%
! TATATATGCATTAACAGGAT+TGG + Chr7:53150631-53150650 None:intergenic 25.0%
! TCAGAGTTTCTATATTAGAA+AGG - Chr7:53150398-53150417 MsG0780038789.01.T01:CDS 25.0%
! TGGAAAAATTTACAACTTGT+GGG + Chr7:53151186-53151205 None:intergenic 25.0%
! TTCCAAAGAATTACTAGATT+GGG + Chr7:53152565-53152584 None:intergenic 25.0%
! TTGGAAAAATTTACAACTTG+TGG + Chr7:53151187-53151206 None:intergenic 25.0%
!! ACTTGCATGGTAATTTTATT+AGG - Chr7:53150314-53150333 MsG0780038789.01.T01:CDS 25.0%
!! CATCAATAATGCTTCAATTT+TGG + Chr7:53150872-53150891 None:intergenic 25.0%
!! CTAGACACTATCAATTTTAT+AGG + Chr7:53150752-53150771 None:intergenic 25.0%
!! GCAAGTTTCAAATTTTATAG+TGG - Chr7:53151493-53151512 MsG0780038789.01.T01:intron 25.0%
!! TATTCAACTATAAAAGTGTG+GGG + Chr7:53151377-53151396 None:intergenic 25.0%
!! TCTAAAAAATGCTGCTTAAA+AGG - Chr7:53151539-53151558 MsG0780038789.01.T01:intron 25.0%
!! TTCAACAATTTTCATCAACA+AGG - Chr7:53150265-53150284 MsG0780038789.01.T01:CDS 25.0%
!!! AAAATCAAATGTTTTGGCAA+TGG - Chr7:53150454-53150473 MsG0780038789.01.T01:intron 25.0%
!!! ACATTTTTTGTTAACTTGCA+TGG - Chr7:53150301-53150320 MsG0780038789.01.T01:CDS 25.0%
!!! ATCACAAATTTTTTATGCCA+TGG - Chr7:53152267-53152286 MsG0780038789.01.T01:CDS 25.0%
!!! TCAAACGACTAACATTTTTT+AGG - Chr7:53151091-53151110 MsG0780038789.01.T01:intron 25.0%
!!! TTTTAAGGGTATGTACAAAA+GGG + Chr7:53152038-53152057 None:intergenic 25.0%
!!! TTTTTAAGGGTATGTACAAA+AGG + Chr7:53152039-53152058 None:intergenic 25.0%
AATTTCTTGTAATTGGTCAG+AGG - Chr7:53150041-53150060 MsG0780038789.01.T01:CDS 30.0%
ACTCTCATAATCACTTATGA+AGG - Chr7:53152372-53152391 MsG0780038789.01.T01:intron 30.0%
AGAAAGTGAAAAGTTTACCT+AGG + Chr7:53150544-53150563 None:intergenic 30.0%
ATCTTAAAATGTAAGCCGTT+TGG - Chr7:53151139-53151158 MsG0780038789.01.T01:intron 30.0%
ATTCCATTAATGTGTACCTA+AGG - Chr7:53151810-53151829 MsG0780038789.01.T01:intron 30.0%
CACTATCAACATTGTTTGTA+GGG + Chr7:53152689-53152708 None:intergenic 30.0%
GAAAAGTTTACCTAGGATTT+GGG + Chr7:53150537-53150556 None:intergenic 30.0%
GCAAGTATTTAGGAAAGATT+TGG + Chr7:53151220-53151239 None:intergenic 30.0%
GGTATTATAGTCATTCAGTT+AGG + Chr7:53151599-53151618 None:intergenic 30.0%
GTTCCAAAGAATTACTAGAT+TGG + Chr7:53152566-53152585 None:intergenic 30.0%
TCACTATCAACATTGTTTGT+AGG + Chr7:53152690-53152709 None:intergenic 30.0%
TGAAAAGTTTACCTAGGATT+TGG + Chr7:53150538-53150557 None:intergenic 30.0%
TGAAGAATCATGACTTAAGT+TGG + Chr7:53150145-53150164 None:intergenic 30.0%
TTAAACCAATCATACTATGG+TGG + Chr7:53152118-53152137 None:intergenic 30.0%
TTAGGTTTAGTTGCATGAAT+TGG - Chr7:53150332-53150351 MsG0780038789.01.T01:CDS 30.0%
TTTATCCACCATAGTATGAT+TGG - Chr7:53152110-53152129 MsG0780038789.01.T01:intron 30.0%
! AAGATTTGGAATGTCAACAT+TGG + Chr7:53151206-53151225 None:intergenic 30.0%
! ACTCATTTCACCCATTTTAT+TGG - Chr7:53152584-53152603 MsG0780038789.01.T01:CDS 30.0%
! AGCATTTTCAATATCTGAGA+TGG + Chr7:53150217-53150236 None:intergenic 30.0%
! CAAAAGACCAAGCTTTTAAT+AGG - Chr7:53150163-53150182 MsG0780038789.01.T01:CDS 30.0%
! CTTTTGTACGGAAAATAGTT+GGG - Chr7:53151851-53151870 MsG0780038789.01.T01:intron 30.0%
! GCTTATCCTTATTTCATAGT+GGG - Chr7:53152411-53152430 MsG0780038789.01.T01:intron 30.0%
! TGCTTATCCTTATTTCATAG+TGG - Chr7:53152410-53152429 MsG0780038789.01.T01:intron 30.0%
! TTTAAGGGTATGTACAAAAG+GGG + Chr7:53152037-53152056 None:intergenic 30.0%
!! AGTTGAGTTGATACATGTTA+TGG + Chr7:53151298-53151317 None:intergenic 30.0%
!! GCACTTGTAAGTATTTTAGA+AGG + Chr7:53151019-53151038 None:intergenic 30.0%
!! TAAATCAGCTTTGTTTGAGA+AGG + Chr7:53150681-53150700 None:intergenic 30.0%
!! TTTTCAATATCTGAGATGGT+AGG + Chr7:53150213-53150232 None:intergenic 30.0%
!!! AAATGTTTTGGCAATGGATT+GGG - Chr7:53150460-53150479 MsG0780038789.01.T01:intron 30.0%
!!! TTTTTTTCGGAAGTTTGGTT+GGG - Chr7:53151696-53151715 MsG0780038789.01.T01:intron 30.0%
AAAGCAAGTGAAGTTCATGA+AGG - Chr7:53152513-53152532 MsG0780038789.01.T01:CDS 35.0%
AAGAAAATTTCGGCTCAGAA+GGG - Chr7:53152628-53152647 MsG0780038789.01.T01:CDS 35.0%
AAGAGCAGAATTCGCTTAAA+AGG - Chr7:53151741-53151760 MsG0780038789.01.T01:intron 35.0%
AATTACTAGATTGGGCTTCA+TGG + Chr7:53152557-53152576 None:intergenic 35.0%
ACAAAAGCTACTACTAGCAT+TGG + Chr7:53151838-53151857 None:intergenic 35.0%
ACAACACATACAACACATCT+GGG + Chr7:53151935-53151954 None:intergenic 35.0%
ACTCAAATTGCACGATTAGT+AGG - Chr7:53150967-53150986 MsG0780038789.01.T01:intron 35.0%
AGCCCAATCTAGTAATTCTT+TGG - Chr7:53152560-53152579 MsG0780038789.01.T01:CDS 35.0%
ATCCATGTCAAAGACAATGA+TGG - Chr7:53150011-53150030 MsG0780038789.01.T01:CDS 35.0%
ATGTACCGTGACATTAAATC+TGG + Chr7:53151996-53152015 None:intergenic 35.0%
CAAAAGCTACTACTAGCATT+GGG + Chr7:53151837-53151856 None:intergenic 35.0%
CAATACACGTGCAAGTATTT+AGG + Chr7:53151230-53151249 None:intergenic 35.0%
CATGAACTTCACTTGCTTTA+TGG + Chr7:53152512-53152531 None:intergenic 35.0%
GAACAAACAGGAGTTACTAT+AGG - Chr7:53152289-53152308 MsG0780038789.01.T01:CDS 35.0%
GATACGGTCCAAGAAAATTT+CGG - Chr7:53152618-53152637 MsG0780038789.01.T01:CDS 35.0%
GATGAAAGACAAGCATTTAG+AGG - Chr7:53150888-53150907 MsG0780038789.01.T01:intron 35.0%
GATTGTCCCACTATGAAATA+AGG + Chr7:53152420-53152439 None:intergenic 35.0%
TGTACCGTGACATTAAATCT+GGG + Chr7:53151995-53152014 None:intergenic 35.0%
TGTGTACGGTCCAATAAAAT+GGG + Chr7:53152597-53152616 None:intergenic 35.0%
TTCACTTGCTTTATGGTCTT+GGG + Chr7:53152505-53152524 None:intergenic 35.0%
TTGTGTACGGTCCAATAAAA+TGG + Chr7:53152598-53152617 None:intergenic 35.0%
! ACTGTACGATAGTCAGTTTT+AGG + Chr7:53151423-53151442 None:intergenic 35.0%
! CAGTTAGGAATGAGCATTTT+TGG + Chr7:53151584-53151603 None:intergenic 35.0%
! GCTTTTGTACGGAAAATAGT+TGG - Chr7:53151850-53151869 MsG0780038789.01.T01:intron 35.0%
! TGCTAGTAGTAGCTTTTGTA+CGG - Chr7:53151839-53151858 MsG0780038789.01.T01:intron 35.0%
! TTTTATGCCATGGAACAAAC+AGG - Chr7:53152277-53152296 MsG0780038789.01.T01:CDS 35.0%
!! AAGTGATTATGAGAGTGTCA+GGG + Chr7:53152368-53152387 None:intergenic 35.0%
!! GCATTAACAGGATTGGTTTA+AGG + Chr7:53150624-53150643 None:intergenic 35.0%
!! TAAGTGATTATGAGAGTGTC+AGG + Chr7:53152369-53152388 None:intergenic 35.0%
!!! AAGCAGCATTTTTTAGAAGC+TGG + Chr7:53151536-53151555 None:intergenic 35.0%
!!! AGGAATGAGCATTTTTGGTT+GGG + Chr7:53151579-53151598 None:intergenic 35.0%
!!! AGTCAGTTTTAGGTGATTGA+AGG + Chr7:53151413-53151432 None:intergenic 35.0%
!!! CAAATGTTTTGGCAATGGAT+TGG - Chr7:53150459-53150478 MsG0780038789.01.T01:intron 35.0%
!!! GTTTTTTTCGGAAGTTTGGT+TGG - Chr7:53151695-53151714 MsG0780038789.01.T01:intron 35.0%
!!! TAGGAATGAGCATTTTTGGT+TGG + Chr7:53151580-53151599 None:intergenic 35.0%
AAGGATAAGCAAAGTGCAAG+TGG + Chr7:53152401-53152420 None:intergenic 40.0%
ACACATTGCCACATAACATC+TGG + Chr7:53151963-53151982 None:intergenic 40.0%
ACTTCAGATACTGTCTCATG+TGG + Chr7:53150120-53150139 None:intergenic 40.0%
AGAAGGGTTGCTTGAAGATA+TGG - Chr7:53152644-53152663 MsG0780038789.01.T01:CDS 40.0%
AGGATTTGGGCTATTCTTGA+TGG + Chr7:53150524-53150543 None:intergenic 40.0%
AGTAACTCCTGTTTGTTCCA+TGG + Chr7:53152287-53152306 None:intergenic 40.0%
ATTAAATCTGGGCCACACAA+AGG - Chr7:53151894-53151913 MsG0780038789.01.T01:intron 40.0%
ATTGGACCGTACACAAGATA+CGG - Chr7:53152602-53152621 MsG0780038789.01.T01:CDS 40.0%
CAAGAAAATTTCGGCTCAGA+AGG - Chr7:53152627-53152646 MsG0780038789.01.T01:CDS 40.0%
CACAACACATACAACACATC+TGG + Chr7:53151936-53151955 None:intergenic 40.0%
CACATTGCCACATAACATCT+GGG + Chr7:53151962-53151981 None:intergenic 40.0%
CTCCATCATTGTCTTTGACA+TGG + Chr7:53150016-53150035 None:intergenic 40.0%
CTTCACTTGCTTTATGGTCT+TGG + Chr7:53152506-53152525 None:intergenic 40.0%
GATGTGTTGTATGTGTTGTG+TGG - Chr7:53151936-53151955 MsG0780038789.01.T01:intron 40.0%
GGTCCTTAGGTACACATTAA+TGG + Chr7:53151816-53151835 None:intergenic 40.0%
GTAGGGTTTCTAACCATGAA+TGG + Chr7:53152672-53152691 None:intergenic 40.0%
GTCACCGTGACATTAAATCT+GGG - Chr7:53151883-53151902 MsG0780038789.01.T01:intron 40.0%
TCAAGAATAGCCCAAATCCT+AGG - Chr7:53150524-53150543 MsG0780038789.01.T01:intron 40.0%
TCATGTGGCAACATAAGAAG+AGG + Chr7:53150105-53150124 None:intergenic 40.0%
TGTCACCGTGACATTAAATC+TGG - Chr7:53151882-53151901 MsG0780038789.01.T01:intron 40.0%
! CTTCTGAGCCGAAATTTTCT+TGG + Chr7:53152629-53152648 None:intergenic 40.0%
!! GATTGGGTGATGATGGATAT+AGG - Chr7:53150476-53150495 MsG0780038789.01.T01:intron 40.0%
!! TGAAGATATGGTGCCATTCA+TGG - Chr7:53152656-53152675 MsG0780038789.01.T01:CDS 40.0%
!!! CAGGGTTTTTTTCGGAAGTT+TGG - Chr7:53151691-53151710 MsG0780038789.01.T01:intron 40.0%
!!! TCATCACGCAGGGTTTTTTT+CGG - Chr7:53151683-53151702 MsG0780038789.01.T01:intron 40.0%
AACGTGAGTTAACTCACGCA+GGG + Chr7:53151620-53151639 None:intergenic 45.0%
ACCTTGCCTAGTGAATCCTT+TGG - Chr7:53151769-53151788 MsG0780038789.01.T01:intron 45.0%
ATGTGGCAATGTGTGTTGTG+TGG - Chr7:53151969-53151988 MsG0780038789.01.T01:intron 45.0%
CACAACACAACACCTTTGTG+TGG + Chr7:53151909-53151928 None:intergenic 45.0%
CCTTGCCTAGTGAATCCTTT+GGG - Chr7:53151770-53151789 MsG0780038789.01.T01:intron 45.0%
CTTGGACCGTATCTTGTGTA+CGG + Chr7:53152611-53152630 None:intergenic 45.0%
GGATATAGGTGGAGGAAGTA+TGG - Chr7:53150490-53150509 MsG0780038789.01.T01:intron 45.0%
GTAAGCCGTTTGGTTGAGAT+CGG - Chr7:53151149-53151168 MsG0780038789.01.T01:intron 45.0%
GTCATCCGATCTCAACCAAA+CGG + Chr7:53151157-53151176 None:intergenic 45.0%
GTGGCCCAGATTTAATGTCA+CGG - Chr7:53151988-53152007 MsG0780038789.01.T01:intron 45.0%
GTGGCCCAGATTTAATGTCA+CGG + Chr7:53152007-53151988 None:intergenic 45.0%
TAACGTGAGTTAACTCACGC+AGG + Chr7:53151621-53151640 None:intergenic 45.0%
TCCACCAATGAAGAAGTCCA+AGG - Chr7:53152458-53152477 MsG0780038789.01.T01:intron 45.0%
TGGACTTCTTCATTGGTGGA+TGG + Chr7:53152458-53152477 None:intergenic 45.0%
! ACTACTAGCATTGGGTCCTT+AGG + Chr7:53151829-53151848 None:intergenic 45.0%
! CCTAGTGAATCCTTTGGGTT+GGG - Chr7:53151775-53151794 MsG0780038789.01.T01:intron 45.0%
! CTTGCTTTATGGTCTTGGGT+TGG + Chr7:53152501-53152520 None:intergenic 45.0%
! GGACTTCTTCATTGGTGGAT+GGG + Chr7:53152457-53152476 None:intergenic 45.0%
! GTAGCCTTGGACTTCTTCAT+TGG + Chr7:53152465-53152484 None:intergenic 45.0%
!! CACAAAGGTGTTGTGTTGTG+CGG - Chr7:53151909-53151928 MsG0780038789.01.T01:intron 45.0%
!! GTACAAAAGGGGAAGCACTT+GGG + Chr7:53152026-53152045 None:intergenic 45.0%
!! GTGATGATGGATATAGGTGG+AGG - Chr7:53150482-53150501 MsG0780038789.01.T01:intron 45.0%
!! TCAATTTTGGCCCAACCCAA+AGG + Chr7:53151788-53151807 None:intergenic 45.0%
!! TGGGAGCGAGCATTTTAAGT+TGG - Chr7:53151715-53151734 MsG0780038789.01.T01:intron 45.0%
!! TGGGTGATGATGGATATAGG+TGG - Chr7:53150479-53150498 MsG0780038789.01.T01:intron 45.0%
!! TGTACAAAAGGGGAAGCACT+TGG + Chr7:53152027-53152046 None:intergenic 45.0%
!!! GGGAGCGAGCATTTTAAGTT+GGG - Chr7:53151716-53151735 MsG0780038789.01.T01:intron 45.0%
ACTATAGGTGCACCAACCCA+AGG - Chr7:53152304-53152323 MsG0780038789.01.T01:CDS 50.0%
AGGATTCACTAGGCAAGGTG+AGG + Chr7:53151768-53151787 None:intergenic 50.0%
CCCAAAGGATTCACTAGGCA+AGG + Chr7:53151773-53151792 None:intergenic 50.0%
CCCAACCCAAAGGATTCACT+AGG + Chr7:53151778-53151797 None:intergenic 50.0%
CTGCGTGAGTTAACTCACGT+AGG - Chr7:53151619-53151638 MsG0780038789.01.T01:intron 50.0%
GCCTAGTGAATCCTTTGGGT+TGG - Chr7:53151774-53151793 MsG0780038789.01.T01:intron 50.0%
GCCTTGGACTTCTTCATTGG+TGG + Chr7:53152462-53152481 None:intergenic 50.0%
GCTTCTTAGCACCACACCTT+GGG + Chr7:53152323-53152342 None:intergenic 50.0%
GGATTCACTAGGCAAGGTGA+GGG + Chr7:53151767-53151786 None:intergenic 50.0%
TCCAAGGCTACCTCTTCACA+AGG - Chr7:53152474-53152493 MsG0780038789.01.T01:CDS 50.0%
TCCTTGTGAAGAGGTAGCCT+TGG + Chr7:53152478-53152497 None:intergenic 50.0%
TGCTTCTTAGCACCACACCT+TGG + Chr7:53152324-53152343 None:intergenic 50.0%
TGTGTGGCCCAGATGTTATG+TGG - Chr7:53151952-53151971 MsG0780038789.01.T01:intron 50.0%
! AAGGTGTGGTGCTAAGAAGC+AGG - Chr7:53152323-53152342 MsG0780038789.01.T01:CDS 50.0%
! AGGAGAAAGGTGTGAGGAGA+AGG + Chr7:53152730-53152749 None:intergenic 50.0%
!! GAGAGTGTCAGGGTCTTCAT+TGG + Chr7:53152358-53152377 None:intergenic 50.0%
!! GGCAATGGATTGGGTGATGA+TGG - Chr7:53150469-53150488 MsG0780038789.01.T01:intron 50.0%
!! TTGGGTTGGTCCTTGTGAAG+AGG + Chr7:53152487-53152506 None:intergenic 50.0%
CTTAGCACCACACCTTGGGT+TGG + Chr7:53152319-53152338 None:intergenic 55.0%
GTTGCGTGACTCATCACGCA+GGG - Chr7:53151673-53151692 MsG0780038789.01.T01:intron 55.0%
! TGCTGGAGGAGAAAGGTGTG+AGG + Chr7:53152736-53152755 None:intergenic 55.0%
AGGTGCACCAACCCAAGGTG+TGG - Chr7:53152309-53152328 MsG0780038789.01.T01:CDS 60.0%
GGTTGCGTGACTCATCACGC+AGG - Chr7:53151672-53151691 MsG0780038789.01.T01:intron 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 53150000 53152758 53150000 ID=MsG0780038789.01;Name=MsG0780038789.01
Chr7 mRNA 53150000 53152758 53150000 ID=MsG0780038789.01.T01;Parent=MsG0780038789.01;Name=MsG0780038789.01.T01;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|1|1|3|0|296
Chr7 exon 53152472 53152758 53152472 ID=MsG0780038789.01.T01:exon:9911;Parent=MsG0780038789.01.T01
Chr7 exon 53152213 53152356 53152213 ID=MsG0780038789.01.T01:exon:9910;Parent=MsG0780038789.01.T01
Chr7 exon 53150000 53150459 53150000 ID=MsG0780038789.01.T01:exon:9909;Parent=MsG0780038789.01.T01
Chr7 CDS 53152472 53152758 53152472 ID=MsG0780038789.01.T01:cds;Parent=MsG0780038789.01.T01
Chr7 CDS 53152213 53152356 53152213 ID=MsG0780038789.01.T01:cds;Parent=MsG0780038789.01.T01
Chr7 CDS 53150000 53150459 53150000 ID=MsG0780038789.01.T01:cds;Parent=MsG0780038789.01.T01
Gene Sequence

>MsG0780038789.01.T01

ATGATTGACTCATCCATGTCAAAGACAATGATGGAGAAACTAATTTCTTGTAATTGGTCAGAGGATGATGAACTTTTAAGAGAGCTTTTAGTTGATGAGTCTCCTCTTCTTATGTTGCCACATGAGACAGTATCTGAAGTAACCAACTTAAGTCATGATTCTTCAAAAGACCAAGCTTTTAATAGGTTCATTTCAAATATTTATTCAGGTCCTACCATCTCAGATATTGAAAATGCTTTGTTAGTTACTAACCATAGTAACCAATTTCAACAATTTTCATCAACAAGAGTTTCTATATTAGAAAGGAGTTTGAGTAAGATTGAGAATAAGTATACTTTGAAAATCAAATGTTTTGGCAATGGATTGGGTGATGATGGATATAGGTGGAGGAAGTATGGTCAGAAATCCATCAAGAATAGCCCAAATCCTAGGAGTTACTATAGGTGCACCAACCCAAGGTGTGGTGCTAAGAAGCAGGTTGAGAGATCCAATGAAGACCCTGACACTCTCATAATCACTTATGAAGGACTCCACTTGCACTTTGCTTATCCTTATTTCATAGTGGGACAATCACATCAATCTCATTCCCATCCACCAATGAAGAAGTCCAAGGCTACCTCTTCACAAGGACCAACCCAAGACCATAAAGCAAGTGAAGTTCATGAAGGTCAGAATATACAAGAAGTCCATGAAGCCCAATCTAGTAATTCTTTGGAACTCATTTCACCCATTTTATTGGACCGTACACAAGATACGGTCCAAGAAAATTTCGGCTCAGAAGGGTTGCTTGAAGATATGGTGCCATTCATGGTTAGAAACCCTACAAACAATGTTGATAGTGATGATTACTCAAAATTTTCCTTCTCCTCACACCTTTCTCCTCCAGCATAA
Protein sequence

>MsG0780038789.01.T01

MIDSSMSKTMMEKLISCNWSEDDELLRELLVDESPLLMLPHETVSEVTNLSHDSSKDQAFNRFISNIYSGPTISDIENALLVTNHSNQFQQFSSTRVSILERSLSKIENKYTLKIKCFGNGLGDDGYRWRKYGQKSIKNSPNPRSYYRCTNPRCGAKKQVERSNEDPDTLIITYEGLHLHFAYPYFIVGQSHQSHSHPPMKKSKATSSQGPTQDHKASEVHEGQNIQEVHEAQSSNSLELISPILLDRTQDTVQENFGSEGLLEDMVPFMVRNPTNNVDSDDYSKFSFSSHLSPPA*