AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780038841.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038841.01.T01 MTR_7g063290 83.817 241 32 1 1 234 1 241 5.17e-126 371
MsG0780038841.01.T01 MTR_7g063290 62.500 136 24 4 247 364 361 487 4.88e-39 145
MsG0780038841.01.T01 MTR_2g026310 83.626 171 27 1 16 186 17 186 1.77e-101 310
MsG0780038841.01.T01 MTR_2g026310 51.799 139 33 6 248 364 425 551 4.65e-24 103
MsG0780038841.01.T01 MTR_2g026380 63.636 242 80 2 1 234 1 242 1.00e-98 301
MsG0780038841.01.T01 MTR_2g026380 49.618 131 42 5 248 364 375 495 6.79e-22 97.1
MsG0780038841.01.T01 MTR_3g081360 62.941 170 62 1 17 186 4 172 1.08e-72 235
MsG0780038841.01.T01 MTR_3g082790 64.368 174 60 2 7 178 10 183 1.06e-69 228
MsG0780038841.01.T01 MTR_3g081380 61.728 162 60 1 18 177 16 177 3.83e-69 215
MsG0780038841.01.T01 MTR_3g082790 71.014 138 40 0 41 178 6 143 1.21e-65 217
MsG0780038841.01.T01 MTR_7g062030 76.842 95 18 1 1 95 19 109 1.13e-38 135
MsG0780038841.01.T01 MTR_3g081390 62.222 90 34 0 89 178 36 125 6.25e-30 112
MsG0780038841.01.T01 MTR_3g081420 44.853 136 46 5 248 364 84 209 3.26e-20 88.2
MsG0780038841.01.T01 MTR_3g081410 52.273 88 23 3 248 335 52 120 8.97e-14 68.2
MsG0780038841.01.T01 MTR_3g088480 38.000 100 59 3 48 146 338 435 4.69e-12 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780038841.01.T01 AT4G16420 58.150 227 76 4 18 234 18 235 1.61e-83 262
MsG0780038841.01.T01 AT4G16420 57.895 228 76 4 18 234 18 236 1.92e-83 262
MsG0780038841.01.T01 AT4G16420 60.092 218 83 3 18 234 18 232 6.11e-83 261
MsG0780038841.01.T01 AT3G07740 58.750 160 65 1 19 177 22 181 7.89e-62 207
MsG0780038841.01.T01 AT3G07740 61.702 141 54 0 37 177 20 160 4.98e-61 204
MsG0780038841.01.T01 AT3G07740 56.287 167 65 2 19 177 22 188 2.92e-59 201
MsG0780038841.01.T01 AT3G07740 65.138 109 38 0 69 177 2 110 7.51e-48 169

Find 87 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATATCAAATTCCTGCCTTT+TGG 0.221672 7:+53900703 None:intergenic
TCGTCGTTTCTTGAGGATTT+TGG 0.221990 7:+53900757 None:intergenic
ACAGACTCCTTAAGAAATTC+TGG 0.251102 7:-53900790 MsG0780038841.01.T01:intron
AAGAAACGACGACCCTTCTT+TGG 0.270029 7:-53900746 MsG0780038841.01.T01:CDS
AAATGTATGGCATGAATAAC+TGG 0.272278 7:-53901500 MsG0780038841.01.T01:CDS
AGTAGCTCGCCCTGCAGGTC+TGG 0.289473 7:+53900004 None:intergenic
ATGCTCATTAAGAAGGGATT+TGG 0.323014 7:-53899672 MsG0780038841.01.T01:CDS
CTCTCCATGCTTCCCTCTTC+CGG 0.329198 7:-53901403 MsG0780038841.01.T01:intron
ACAAAAGCAATCATGCTTAC+AGG 0.334147 7:-53902145 MsG0780038841.01.T01:CDS
TCAACACATAAGTCAAAATC+TGG 0.338230 7:+53902200 None:intergenic
TTTGGAACCCCGCGATTGTT+CGG 0.352779 7:+53900056 None:intergenic
TTGGAACCCCGCGATTGTTC+GGG 0.360592 7:+53900057 None:intergenic
ACACTATAGGATTGTGTACT+TGG 0.367311 7:-53901427 MsG0780038841.01.T01:CDS
TACTGTAATATCGATATTAC+AGG 0.392999 7:-53902251 MsG0780038841.01.T01:CDS
TAGGATATGTCTCATGTTGT+TGG 0.396671 7:-53901290 MsG0780038841.01.T01:CDS
ACCCTCTCATTTGCCCCGAC+TGG 0.397600 7:-53901680 MsG0780038841.01.T01:CDS
ATACACCATGTCAACTTTCA+TGG 0.399055 7:+53899698 None:intergenic
ATTTCCTCCAGAATTTCTTA+AGG 0.405009 7:+53900783 None:intergenic
TCCGCAGACATCAAGGCATT+TGG 0.409190 7:+53900038 None:intergenic
TCGCAGGAAGCTCGTGCTGC+TGG 0.418619 7:-53900142 MsG0780038841.01.T01:intron
AGTGGAGATAACTCAGAATC+TGG 0.422645 7:-53902837 MsG0780038841.01.T01:CDS
TCTTCATCCGCGTTCCAGTC+GGG 0.425170 7:+53901666 None:intergenic
TCTGCTGATCCCAGACCTGC+AGG 0.434755 7:-53900014 MsG0780038841.01.T01:CDS
TCTTGCCATGGGGAAAGGGC+AGG 0.439550 7:-53901249 MsG0780038841.01.T01:CDS
GTAGCTCGCCCTGCAGGTCT+GGG 0.445211 7:+53900005 None:intergenic
CTGTCAGTACAAATGATTGC+TGG 0.451807 7:-53899767 MsG0780038841.01.T01:CDS
AAGTTGAAGAAAGTGCCCTT+AGG 0.452945 7:-53900103 MsG0780038841.01.T01:CDS
GGCACACGGCACACTTAATC+CGG 0.453805 7:+53902222 None:intergenic
AACTCAGAATCTGGAGCTGC+AGG 0.455987 7:-53902828 MsG0780038841.01.T01:intron
AACTTCTTGCCATGGGGAAA+GGG 0.466541 7:-53901253 MsG0780038841.01.T01:CDS
AGGCATGCACTGAACACTAT+AGG 0.474478 7:-53901440 MsG0780038841.01.T01:CDS
AAGGAGCGGGTGAAGCGAAA+AGG 0.478432 7:-53902292 MsG0780038841.01.T01:CDS
CCACTAGCTTCAACCAAAGA+AGG 0.482411 7:+53900733 None:intergenic
AAGCACTTTCTCTTGCCCTA+AGG 0.483082 7:+53900087 None:intergenic
GAACTTCTTGCCATGGGGAA+AGG 0.484313 7:-53901254 MsG0780038841.01.T01:CDS
ATGTGGTCCCGAACAATCGC+GGG 0.490676 7:-53900064 MsG0780038841.01.T01:CDS
CTTGAAGTAGCTCGCCCTGC+AGG 0.492075 7:+53899999 None:intergenic
TTCTTCATCCGCGTTCCAGT+CGG 0.492141 7:+53901665 None:intergenic
CTTCATCCGCGTTCCAGTCG+GGG 0.497867 7:+53901667 None:intergenic
GAAGCATCTCATACCGGAAG+AGG 0.499604 7:+53901390 None:intergenic
GTATGATATGCTCATTAAGA+AGG 0.500449 7:-53899679 MsG0780038841.01.T01:CDS
TCGATATTACAGGACAAATC+CGG 0.502784 7:-53902241 MsG0780038841.01.T01:CDS
AGCACTTTCTCTTGCCCTAA+GGG 0.511703 7:+53900088 None:intergenic
CCTTCTTTGGTTGAAGCTAG+TGG 0.513297 7:-53900733 MsG0780038841.01.T01:CDS
AGTTGAAGAAAGTGCCCTTA+GGG 0.524489 7:-53900102 MsG0780038841.01.T01:CDS
TGCTCATCGGATGTTCCAGC+TGG 0.528399 7:-53899724 MsG0780038841.01.T01:CDS
CAACTTTCATGGTATCCAGC+TGG 0.530057 7:+53899709 None:intergenic
TTGTAGGGACTTGAAATGTA+TGG 0.531054 7:-53901513 MsG0780038841.01.T01:intron
ATCTTCAGATACACAGTTGG+AGG 0.533593 7:+53899800 None:intergenic
AGGAGCGGGTGAAGCGAAAA+GGG 0.534590 7:-53902291 MsG0780038841.01.T01:CDS
ATCACCCTGCCCTTTCCCCA+TGG 0.538821 7:+53901244 None:intergenic
CAGAGAAGAACTTCTTGCCA+TGG 0.541694 7:-53901261 MsG0780038841.01.T01:CDS
GCTAGTGGTTATAACCCAAA+AGG 0.542052 7:-53900718 MsG0780038841.01.T01:CDS
AGAAGGGTCGTCGTTTCTTG+AGG 0.547054 7:+53900750 None:intergenic
GGCAAGAGAAAGTGCTTATG+TGG 0.547957 7:-53900081 MsG0780038841.01.T01:CDS
CAAAAGCAATCATGCTTACA+GGG 0.548051 7:-53902144 MsG0780038841.01.T01:CDS
AGAGAAGAACTTCTTGCCAT+GGG 0.548697 7:-53901260 MsG0780038841.01.T01:CDS
CTTGCCATGGGGAAAGGGCA+GGG 0.550128 7:-53901248 MsG0780038841.01.T01:CDS
TGCATCTTCAGATACACAGT+TGG 0.554518 7:+53899797 None:intergenic
AGCAGAGTCCGCAGACATCA+AGG 0.554768 7:+53900031 None:intergenic
TCTTCAAATCTGATGCTCAT+CGG 0.573042 7:-53899737 MsG0780038841.01.T01:CDS
TTCCAGTCGGGGCAAATGAG+AGG 0.577347 7:+53901678 None:intergenic
GTGGTTATAACCCAAAAGGC+AGG 0.589404 7:-53900714 MsG0780038841.01.T01:CDS
TGTGAGTTAGGTCAAGGAGC+GGG 0.592638 7:-53902305 MsG0780038841.01.T01:intron
TATGATATGCTCATTAAGAA+GGG 0.593230 7:-53899678 MsG0780038841.01.T01:CDS
TGTCAATGAAATGATGCTGC+AGG 0.597912 7:-53899973 MsG0780038841.01.T01:CDS
CTGCTGATCCCAGACCTGCA+GGG 0.599308 7:-53900013 MsG0780038841.01.T01:CDS
CATTTGCCCCGACTGGAACG+CGG 0.599728 7:-53901673 MsG0780038841.01.T01:CDS
CAATCATGCTTACAGGGTCA+TGG 0.600463 7:-53902138 MsG0780038841.01.T01:intron
TCCAGTCGGGGCAAATGAGA+GGG 0.601693 7:+53901679 None:intergenic
CACTAGCTTCAACCAAAGAA+GGG 0.601892 7:+53900734 None:intergenic
GAAGAAGTTGCTGAGCATGT+TGG 0.602780 7:-53901477 MsG0780038841.01.T01:CDS
TATGTGGTCCCGAACAATCG+CGG 0.611263 7:-53900065 MsG0780038841.01.T01:CDS
AAGCATCTCATACCGGAAGA+GGG 0.618355 7:+53901391 None:intergenic
CAACACATAAGTCAAAATCT+GGG 0.618792 7:+53902201 None:intergenic
CATACCGGAAGAGGGAAGCA+TGG 0.621701 7:+53901399 None:intergenic
GGGCAGGGTGATGACAAGAA+AGG 0.622437 7:-53901233 MsG0780038841.01.T01:CDS
TCCAAATGCCTTGATGTCTG+CGG 0.623348 7:-53900039 MsG0780038841.01.T01:CDS
TAAGTCAAAATCTGGGCACA+CGG 0.634031 7:+53902208 None:intergenic
TGTGTATCTGAAGATGCAAG+AGG 0.661370 7:-53899792 MsG0780038841.01.T01:CDS
GACTCCTTAAGAAATTCTGG+AGG 0.664705 7:-53900787 MsG0780038841.01.T01:CDS
AATGTATGGCATGAATAACT+GGG 0.679265 7:-53901499 MsG0780038841.01.T01:CDS
TTGTGAGTTAGGTCAAGGAG+CGG 0.679425 7:-53902306 MsG0780038841.01.T01:intron
TGTTGGAACAAAGAACAAAG+AGG 0.696475 7:-53901460 MsG0780038841.01.T01:CDS
GGATACCATGAAAGTTGACA+TGG 0.698778 7:-53899703 MsG0780038841.01.T01:CDS
TGTGGTCCCGAACAATCGCG+GGG 0.699968 7:-53900063 MsG0780038841.01.T01:CDS
GAGAAGAACTTCTTGCCATG+GGG 0.705178 7:-53901259 MsG0780038841.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGATAAATCATTATATT+TGG - Chr7:53902438-53902457 MsG0780038841.01.T01:intron 10.0%
!! ATTTATTCATTTATGATTAA+TGG - Chr7:53901671-53901690 MsG0780038841.01.T01:CDS 10.0%
!! TTCATTAAAATAAATGATTT+GGG + Chr7:53900587-53900606 None:intergenic 10.0%
!! TTTCATTAAAATAAATGATT+TGG + Chr7:53900588-53900607 None:intergenic 10.0%
!!! AATATCTTTTTATTGTAATT+AGG - Chr7:53901084-53901103 MsG0780038841.01.T01:intron 10.0%
!!! AGTTTTTTTTTTTTTTTTAG+AGG - Chr7:53900119-53900138 MsG0780038841.01.T01:CDS 10.0%
!!! TTATTTTAATGAAAATCAAT+TGG - Chr7:53900594-53900613 MsG0780038841.01.T01:intron 10.0%
!!! TTTATGTAACTAATTTTAAT+GGG - Chr7:53900214-53900233 MsG0780038841.01.T01:intron 10.0%
!! ACATAGTAAATTAAAAAATG+TGG + Chr7:53901287-53901306 None:intergenic 15.0%
!! ACATCAAAAGAAAAAAAAAA+TGG + Chr7:53899789-53899808 None:intergenic 15.0%
!! ATAAATAGACAATTGAATTT+AGG + Chr7:53901653-53901672 None:intergenic 15.0%
!! ATCTAAATTAAATTTCATTC+AGG + Chr7:53900039-53900058 None:intergenic 15.0%
!! ATCTATCGTTTATATATTAT+AGG - Chr7:53903018-53903037 MsG0780038841.01.T01:intron 15.0%
!! TAAATAGACAATTGAATTTA+GGG + Chr7:53901652-53901671 None:intergenic 15.0%
!! TGATACATATCTATAATAAA+AGG - Chr7:53903436-53903455 MsG0780038841.01.T01:intron 15.0%
!! TTTGAATTGAAAAATATTGA+AGG - Chr7:53903561-53903580 MsG0780038841.01.T01:intron 15.0%
!!! ATACTTTTTTTTAAGAGAAA+TGG + Chr7:53900310-53900329 None:intergenic 15.0%
!!! CATTTTTAAAACGATATTTT+TGG - Chr7:53900695-53900714 MsG0780038841.01.T01:intron 15.0%
!!! GTTTATGTAACTAATTTTAA+TGG - Chr7:53900213-53900232 MsG0780038841.01.T01:intron 15.0%
!!! TCTATATCAGTTTTTTAATA+TGG - Chr7:53902300-53902319 MsG0780038841.01.T01:intron 15.0%
!!! TTTTCTACCAATAATTTTTT+TGG - Chr7:53902494-53902513 MsG0780038841.01.T01:intron 15.0%
!! AAATTGTATCTTGTCTAATT+CGG + Chr7:53900813-53900832 None:intergenic 20.0%
!! AAGAAAATGATAATTCACAT+TGG + Chr7:53902993-53903012 None:intergenic 20.0%
!! AATATTGTGTAATGTCAATT+GGG + Chr7:53903149-53903168 None:intergenic 20.0%
!! ACTATTACGAATAATATAAC+AGG + Chr7:53899828-53899847 None:intergenic 20.0%
!! CAAAATACTTACATTCATAT+TGG + Chr7:53900287-53900306 None:intergenic 20.0%
!! CTATTACGAATAATATAACA+GGG + Chr7:53899827-53899846 None:intergenic 20.0%
!! TATTACGAATAATATAACAG+GGG + Chr7:53899826-53899845 None:intergenic 20.0%
!! TCGTTTATATATTATAGGAT+CGG - Chr7:53903023-53903042 MsG0780038841.01.T01:intron 20.0%
!!! AAAGGTGTGAATTTTATATT+TGG - Chr7:53903115-53903134 MsG0780038841.01.T01:intron 20.0%
!!! AATGTTTGAACATAATTTTC+TGG - Chr7:53901696-53901715 MsG0780038841.01.T01:CDS 20.0%
!!! ACAAGATACAATTTTCAATT+TGG - Chr7:53900819-53900838 MsG0780038841.01.T01:intron 20.0%
!!! ACTAATTTTAATGGGATTAT+AGG - Chr7:53900222-53900241 MsG0780038841.01.T01:intron 20.0%
!!! ATACAATTTTCAATTTGGTT+AGG - Chr7:53900824-53900843 MsG0780038841.01.T01:intron 20.0%
!!! ATGTTTGAACATAATTTTCT+GGG - Chr7:53901697-53901716 MsG0780038841.01.T01:intron 20.0%
!!! CAATAATTTTTTTGGTTGTA+GGG - Chr7:53902502-53902521 MsG0780038841.01.T01:intron 20.0%
!!! GTTAATTTTATTTACTGTGT+AGG - Chr7:53901146-53901165 MsG0780038841.01.T01:intron 20.0%
!!! TAAAATAAATGATTTGGGAT+TGG + Chr7:53900582-53900601 None:intergenic 20.0%
!!! TAAGCAAAAATTCACTTTTT+AGG + Chr7:53900407-53900388 None:intergenic 20.0%
!!! TATTTTTATGAATTTGAGTG+TGG + Chr7:53903505-53903524 None:intergenic 20.0%
!!! TCATATTGGTCATTTTTTAT+AGG + Chr7:53900273-53900292 None:intergenic 20.0%
!!! TTGGTTTTTAAACTTTGATT+TGG + Chr7:53901374-53901393 None:intergenic 20.0%
!!! TTTATTTTATAGTGATTCTG+TGG + Chr7:53900935-53900954 None:intergenic 20.0%
!!! TTTTTAAACTTTGATTTGGA+TGG + Chr7:53901370-53901389 None:intergenic 20.0%
! AGAAACCAACAAAACTAAAA+TGG + Chr7:53903469-53903488 None:intergenic 25.0%
! AGGAAAACATTTGAAAGTAA+TGG + Chr7:53901925-53901944 None:intergenic 25.0%
! ATAGAGCATGATAATTGAAA+AGG + Chr7:53901230-53901249 None:intergenic 25.0%
! ATTACGAATAATATAACAGG+GGG + Chr7:53899825-53899844 None:intergenic 25.0%
! CAAAACAACTTAATGAGAAT+TGG + Chr7:53900625-53900644 None:intergenic 25.0%
! CAATATTGTGTAATGTCAAT+TGG + Chr7:53903150-53903169 None:intergenic 25.0%
! CATTCTTTCAGATAGATTTA+GGG - Chr7:53902937-53902956 MsG0780038841.01.T01:intron 25.0%
! CCTACAACCAAAAAAATTAT+TGG + Chr7:53902504-53902523 None:intergenic 25.0%
! CTAGAGAGTAAATGATAATT+AGG - Chr7:53899952-53899971 MsG0780038841.01.T01:CDS 25.0%
! GAAAACTTATTGTGTATGTT+TGG - Chr7:53901591-53901610 MsG0780038841.01.T01:intron 25.0%
! GAAACTAAAGAATGAAAATG+TGG + Chr7:53901407-53901426 None:intergenic 25.0%
! GTTACATAAACAATTTGTGT+AGG + Chr7:53900204-53900223 None:intergenic 25.0%
! GTTATGCGACAATTAAAAAA+GGG - Chr7:53901985-53902004 MsG0780038841.01.T01:intron 25.0%
! TAAGTTTAACAAGACATCAA+AGG + Chr7:53901945-53901964 None:intergenic 25.0%
! TAATTTAGATGTGTAGTCAT+AGG - Chr7:53900049-53900068 MsG0780038841.01.T01:CDS 25.0%
! TACTGTAATATCGATATTAC+AGG - Chr7:53901779-53901798 MsG0780038841.01.T01:intron 25.0%
! TATGATATGCTCATTAAGAA+GGG - Chr7:53904352-53904371 MsG0780038841.01.T01:CDS 25.0%
! TCATTCTTTCAGATAGATTT+AGG - Chr7:53902936-53902955 MsG0780038841.01.T01:intron 25.0%
!! AATTGAATTTAGGGTTGTTA+GGG + Chr7:53901643-53901662 None:intergenic 25.0%
!! TGGTAATGCAATTATATCAA+CGG + Chr7:53902237-53902256 None:intergenic 25.0%
!! TGTTTGAACATAATTTTCTG+GGG - Chr7:53901698-53901717 MsG0780038841.01.T01:intron 25.0%
!! TTTTTGCTTAAATTAGTGAC+CGG - Chr7:53900485-53900504 MsG0780038841.01.T01:intron 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + Chr7:53900378-53900397 None:intergenic 25.0%
!!! AACAACCATTTTAGTTTTGT+TGG - Chr7:53903461-53903480 MsG0780038841.01.T01:intron 25.0%
!!! CCAATAATTTTTTTGGTTGT+AGG - Chr7:53902501-53902520 MsG0780038841.01.T01:intron 25.0%
!!! TAACATTTTGATCGATAGAA+AGG - Chr7:53901963-53901982 MsG0780038841.01.T01:intron 25.0%
!!! TACACAATATTGATTCTTTG+AGG - Chr7:53903158-53903177 MsG0780038841.01.T01:intron 25.0%
AAAATAAAATGTACACCCTC+CGG + Chr7:53900507-53900526 None:intergenic 30.0%
AAAATGTGGCTATATGCAAT+TGG + Chr7:53901393-53901412 None:intergenic 30.0%
AAATGTATGGCATGAATAAC+TGG - Chr7:53902530-53902549 MsG0780038841.01.T01:intron 30.0%
AATGTATGGCATGAATAACT+GGG - Chr7:53902531-53902550 MsG0780038841.01.T01:intron 30.0%
AGACAAATTATCCTGTCAAT+AGG + Chr7:53902329-53902348 None:intergenic 30.0%
ATAAGTTTGACAAAGGAACA+AGG + Chr7:53900912-53900931 None:intergenic 30.0%
ATATGCAAATCCATTTGAGA+AGG - Chr7:53903633-53903652 MsG0780038841.01.T01:intron 30.0%
ATATTATAGGATCGGATTCT+GGG - Chr7:53903031-53903050 MsG0780038841.01.T01:intron 30.0%
ATTTCCTCCAGAATTTCTTA+AGG + Chr7:53903250-53903269 None:intergenic 30.0%
CAACACATAAGTCAAAATCT+GGG + Chr7:53901832-53901851 None:intergenic 30.0%
CGAGTAATCATAGAAACATA+GGG - Chr7:53900988-53901007 MsG0780038841.01.T01:intron 30.0%
GAAAAGAATTCAAGAGCTTA+AGG - Chr7:53903771-53903790 MsG0780038841.01.T01:intron 30.0%
GACAAATTATCCTGTCAATA+GGG + Chr7:53902328-53902347 None:intergenic 30.0%
GGAAGAAATTCATACTTGAA+AGG - Chr7:53903603-53903622 MsG0780038841.01.T01:intron 30.0%
GGTTATGCGACAATTAAAAA+AGG - Chr7:53901984-53902003 MsG0780038841.01.T01:intron 30.0%
GTAATTACTCACATTCTTCA+AGG - Chr7:53900244-53900263 MsG0780038841.01.T01:intron 30.0%
GTATGATATGCTCATTAAGA+AGG - Chr7:53904351-53904370 MsG0780038841.01.T01:CDS 30.0%
TATATTATAGGATCGGATTC+TGG - Chr7:53903030-53903049 MsG0780038841.01.T01:intron 30.0%
TCAACACATAAGTCAAAATC+TGG + Chr7:53901833-53901852 None:intergenic 30.0%
TGAAAATAAGGAAGTTGACT+CGG + Chr7:53900558-53900577 None:intergenic 30.0%
TGAACAATCCTATACTTACA+AGG + Chr7:53899978-53899997 None:intergenic 30.0%
TGATATAATTGCATTACCAC+TGG - Chr7:53902238-53902257 MsG0780038841.01.T01:CDS 30.0%
TGGATGACATTCAATTGTTA+TGG - Chr7:53903803-53903822 MsG0780038841.01.T01:intron 30.0%
TGTAATGTCAATTGGGATTT+AGG + Chr7:53903142-53903161 None:intergenic 30.0%
TGTCAATGACAAAAGAACTA+TGG + Chr7:53903223-53903242 None:intergenic 30.0%
TTGAGATCCAAAATAACTGA+TGG + Chr7:53900739-53900758 None:intergenic 30.0%
TTTACTCTCTAGTAGTATCA+TGG + Chr7:53899944-53899963 None:intergenic 30.0%
TTTATTTACTGTGTAGGTCA+AGG - Chr7:53901152-53901171 MsG0780038841.01.T01:intron 30.0%
! AAATCAAACCTTTTGCATGA+TGG + Chr7:53901046-53901065 None:intergenic 30.0%
! AACCGAAAACCAATTGATTT+AGG - Chr7:53900766-53900785 MsG0780038841.01.T01:CDS 30.0%
! AATATCAAATTCCTGCCTTT+TGG + Chr7:53903330-53903349 None:intergenic 30.0%
! ATAAAATTCACACCTTTTCC+CGG + Chr7:53903112-53903131 None:intergenic 30.0%
! ATATCAAATTCCTGCCTTTT+GGG + Chr7:53903329-53903348 None:intergenic 30.0%
! ATGCAACTATATGTTTTACG+TGG - Chr7:53901124-53901143 MsG0780038841.01.T01:intron 30.0%
! CAATTGAATTTAGGGTTGTT+AGG + Chr7:53901644-53901663 None:intergenic 30.0%
! CATACACAATAAGTTTTCGT+TGG + Chr7:53901589-53901608 None:intergenic 30.0%
! CCTATGTTTCTATGATTACT+CGG + Chr7:53900990-53901009 None:intergenic 30.0%
! GCTAATCGTTCTTATTTACT+AGG - Chr7:53902721-53902740 MsG0780038841.01.T01:intron 30.0%
! GTGAAGTAAAAGTTAGTTTG+TGG + Chr7:53900182-53900201 None:intergenic 30.0%
! TAATTAGGCCTTGTAAGTAT+AGG - Chr7:53899967-53899986 MsG0780038841.01.T01:CDS 30.0%
! TGAAGAAATTTTGCTTCTAG+AGG - Chr7:53902381-53902400 MsG0780038841.01.T01:intron 30.0%
! TTTGGGATTGGATGAAAATA+AGG + Chr7:53900570-53900589 None:intergenic 30.0%
!!! CACCTAAATCAATTGGTTTT+CGG + Chr7:53900771-53900790 None:intergenic 30.0%
!!! TTTTTGTTTTCTGAAACCGT+CGG - Chr7:53904160-53904179 MsG0780038841.01.T01:intron 30.0%
AAAAAGAAGAATGCTGCAAG+TGG - Chr7:53901175-53901194 MsG0780038841.01.T01:CDS 35.0%
AATTGTCGCATAACCTTTGA+GGG + Chr7:53902180-53902199 None:intergenic 35.0%
ACAAAAGCAATCATGCTTAC+AGG - Chr7:53901885-53901904 MsG0780038841.01.T01:intron 35.0%
ACAATTAAAAAAGGGCAACC+CGG - Chr7:53901993-53902012 MsG0780038841.01.T01:intron 35.0%
ACACTATAGGATTGTGTACT+TGG - Chr7:53902603-53902622 MsG0780038841.01.T01:intron 35.0%
ACAGACTCCTTAAGAAATTC+TGG - Chr7:53903240-53903259 MsG0780038841.01.T01:intron 35.0%
AGAGCTTAAGGTTTGATTCA+TGG - Chr7:53903783-53903802 MsG0780038841.01.T01:intron 35.0%
AGATTCACAAGCATTTATGC+AGG + Chr7:53902205-53902224 None:intergenic 35.0%
AGTTCTGTGTTCAGAGATAA+TGG + Chr7:53903749-53903768 None:intergenic 35.0%
ATACACCATGTCAACTTTCA+TGG + Chr7:53904335-53904354 None:intergenic 35.0%
ATGATGATCCATCATGCAAA+AGG - Chr7:53901035-53901054 MsG0780038841.01.T01:intron 35.0%
ATGCTCATTAAGAAGGGATT+TGG - Chr7:53904358-53904377 MsG0780038841.01.T01:CDS 35.0%
CAAAAGCAATCATGCTTACA+GGG - Chr7:53901886-53901905 MsG0780038841.01.T01:intron 35.0%
CAATTATATCAACGGCGATT+TGG + Chr7:53902229-53902248 None:intergenic 35.0%
CACTTTGACAATTTGTAGCT+TGG - Chr7:53901507-53901526 MsG0780038841.01.T01:CDS 35.0%
CCGAGTAATCATAGAAACAT+AGG - Chr7:53900987-53901006 MsG0780038841.01.T01:intron 35.0%
CTGAACTCACCTAAATCAAT+TGG + Chr7:53900778-53900797 None:intergenic 35.0%
TAATATGGTTCCCTATTGAC+AGG - Chr7:53902315-53902334 MsG0780038841.01.T01:intron 35.0%
TAATTGTCGCATAACCTTTG+AGG + Chr7:53902181-53902200 None:intergenic 35.0%
TAGCTTGGAAATTATCGTCA+TGG - Chr7:53901522-53901541 MsG0780038841.01.T01:intron 35.0%
TAGGATATGTCTCATGTTGT+TGG - Chr7:53902740-53902759 MsG0780038841.01.T01:intron 35.0%
TATCGTCATGGAATGAGTAT+CGG - Chr7:53901534-53901553 MsG0780038841.01.T01:intron 35.0%
TCGATATTACAGGACAAATC+CGG - Chr7:53901789-53901808 MsG0780038841.01.T01:intron 35.0%
TCTGTGGATAAGTTTGACAA+AGG + Chr7:53900919-53900938 None:intergenic 35.0%
TCTTCAAATCTGATGCTCAT+CGG - Chr7:53904293-53904312 MsG0780038841.01.T01:intron 35.0%
TGATTTAGGTGAGTTCAGTT+TGG - Chr7:53900780-53900799 MsG0780038841.01.T01:CDS 35.0%
TGGATGGAAATGAACAAGTT+TGG + Chr7:53901354-53901373 None:intergenic 35.0%
TGTTGGAACAAAGAACAAAG+AGG - Chr7:53902570-53902589 MsG0780038841.01.T01:intron 35.0%
TTGTAGGGACTTGAAATGTA+TGG - Chr7:53902517-53902536 MsG0780038841.01.T01:intron 35.0%
TTTAAGTGTGCAATACGTAC+AGG + Chr7:53900874-53900893 None:intergenic 35.0%
! CATTTGTTAAACATGATCGC+AGG - Chr7:53903872-53903891 MsG0780038841.01.T01:intron 35.0%
! GATTGCGGGTATTTTACAAA+TGG - Chr7:53900153-53900172 MsG0780038841.01.T01:intron 35.0%
! TCATTTGAAGCATCTCATAC+CGG + Chr7:53902649-53902668 None:intergenic 35.0%
! TTTAAAGTCGATGCGACTAA+TGG - Chr7:53902411-53902430 MsG0780038841.01.T01:intron 35.0%
!! AATTGCATTACCACTGGTTT+CGG - Chr7:53902244-53902263 MsG0780038841.01.T01:CDS 35.0%
!! GTAAGCATGATTGCTTTTGT+GGG + Chr7:53901885-53901904 None:intergenic 35.0%
!! TAACAAAAGGCATCCAATAG+AGG - Chr7:53903086-53903105 MsG0780038841.01.T01:intron 35.0%
!! TAAGAAAAAAGCATCGATCG+AGG - Chr7:53899676-53899695 MsG0780038841.01.T01:CDS 35.0%
!! TAAGCATGATTGCTTTTGTG+GGG + Chr7:53901884-53901903 None:intergenic 35.0%
!! TGTAAGCATGATTGCTTTTG+TGG + Chr7:53901886-53901905 None:intergenic 35.0%
!!! ATTTTGCTTCTAGAGGTACT+TGG - Chr7:53902388-53902407 MsG0780038841.01.T01:intron 35.0%
!!! CATTCACTTTTTTCACTGCA+TGG - Chr7:53903827-53903846 MsG0780038841.01.T01:intron 35.0%
!!! GATATTTTTGGCGTTAGCAT+CGG - Chr7:53900707-53900726 MsG0780038841.01.T01:CDS 35.0%
!!! TCGATCGATGCTTTTTTCTT+AGG + Chr7:53899677-53899696 None:intergenic 35.0%
AAATGTATGTGCTGCGAGTT+AGG - Chr7:53904203-53904222 MsG0780038841.01.T01:intron 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + Chr7:53902091-53902110 None:intergenic 40.0%
AAGTGAATGAATGCACGCAT+TGG + Chr7:53901492-53901511 None:intergenic 40.0%
AATGTATGTGCTGCGAGTTA+GGG - Chr7:53904204-53904223 MsG0780038841.01.T01:intron 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + Chr7:53902090-53902109 None:intergenic 40.0%
AGAGAAGAACTTCTTGCCAT+GGG - Chr7:53902770-53902789 MsG0780038841.01.T01:intron 40.0%
AGATGTGTAGTCATAGGTGT+TGG - Chr7:53900055-53900074 MsG0780038841.01.T01:CDS 40.0%
AGTGGAGATAACTCAGAATC+TGG - Chr7:53901193-53901212 MsG0780038841.01.T01:CDS 40.0%
AGTGTTTCTCGATCTTCGTA+AGG - Chr7:53901432-53901451 MsG0780038841.01.T01:CDS 40.0%
ATCGTCATGGAATGAGTATC+GGG - Chr7:53901535-53901554 MsG0780038841.01.T01:intron 40.0%
ATCTTCAGATACACAGTTGG+AGG + Chr7:53904233-53904252 None:intergenic 40.0%
ATTGTCGCATAACCTTTGAG+GGG + Chr7:53902179-53902198 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + Chr7:53902059-53902078 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + Chr7:53902085-53902104 None:intergenic 40.0%
CTGTCAGTACAAATGATTGC+TGG - Chr7:53904263-53904282 MsG0780038841.01.T01:intron 40.0%
GACTCCTTAAGAAATTCTGG+AGG - Chr7:53903243-53903262 MsG0780038841.01.T01:intron 40.0%
GCTAGTGGTTATAACCCAAA+AGG - Chr7:53903312-53903331 MsG0780038841.01.T01:intron 40.0%
GGATACCATGAAAGTTGACA+TGG - Chr7:53904327-53904346 MsG0780038841.01.T01:intron 40.0%
GTTCATGCGCTTTCATACTA+AGG - Chr7:53903699-53903718 MsG0780038841.01.T01:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG + Chr7:53902134-53902153 None:intergenic 40.0%
TAAGTCAAAATCTGGGCACA+CGG + Chr7:53901825-53901844 None:intergenic 40.0%
TGAGCAATTACTCGCTGATA+TGG - Chr7:53903367-53903386 MsG0780038841.01.T01:intron 40.0%
TGCATCTTCAGATACACAGT+TGG + Chr7:53904236-53904255 None:intergenic 40.0%
TGCTTAAATTAGTGACCGGA+GGG - Chr7:53900489-53900508 MsG0780038841.01.T01:intron 40.0%
TGCTTATATTAGTGACCGGA+GGG + Chr7:53900374-53900393 None:intergenic 40.0%
TGTCAATGAAATGATGCTGC+AGG - Chr7:53904057-53904076 MsG0780038841.01.T01:intron 40.0%
TGTGTATCTGAAGATGCAAG+AGG - Chr7:53904238-53904257 MsG0780038841.01.T01:intron 40.0%
TTGCTTAAATTAGTGACCGG+AGG - Chr7:53900488-53900507 MsG0780038841.01.T01:intron 40.0%
TTGCTTATATTAGTGACCGG+AGG + Chr7:53900375-53900394 None:intergenic 40.0%
! AAGTGTTCTCTCTTGCGTTT+TGG - Chr7:53899714-53899733 MsG0780038841.01.T01:CDS 40.0%
! AGGCTACTTTGAATGATTGC+GGG - Chr7:53900139-53900158 MsG0780038841.01.T01:CDS 40.0%
! CACTAGCTTCAACCAAAGAA+GGG + Chr7:53903299-53903318 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG - Chr7:53902083-53902102 MsG0780038841.01.T01:intron 40.0%
! GAGGCTACTTTGAATGATTG+CGG - Chr7:53900138-53900157 MsG0780038841.01.T01:CDS 40.0%
! GGATTTTGTGAGTTAGGTCA+AGG - Chr7:53901719-53901738 MsG0780038841.01.T01:intron 40.0%
! TCGTCGTTTCTTGAGGATTT+TGG + Chr7:53903276-53903295 None:intergenic 40.0%
! TGTGTTGAGTGCTTTTCTGT+TGG - Chr7:53901845-53901864 MsG0780038841.01.T01:intron 40.0%
!! AAGTTGAAGAAAGTGCCCTT+AGG - Chr7:53903927-53903946 MsG0780038841.01.T01:intron 40.0%
!! AGTTGAAGAAAGTGCCCTTA+GGG - Chr7:53903928-53903947 MsG0780038841.01.T01:intron 40.0%
!! TTCTGGGGATTTTGTGAGTT+AGG - Chr7:53901713-53901732 MsG0780038841.01.T01:intron 40.0%
AAAGTCGATGCGACTAATGG+TGG - Chr7:53902414-53902433 MsG0780038841.01.T01:intron 45.0%
AACAATGTTGCCGAAACCAG+TGG + Chr7:53902257-53902276 None:intergenic 45.0%
AACTTCTTGCCATGGGGAAA+GGG - Chr7:53902777-53902796 MsG0780038841.01.T01:intron 45.0%
AAGAAACGACGACCCTTCTT+TGG - Chr7:53903284-53903303 MsG0780038841.01.T01:intron 45.0%
AAGCACTTTCTCTTGCCCTA+AGG + Chr7:53903946-53903965 None:intergenic 45.0%
AAGCATCTCATACCGGAAGA+GGG + Chr7:53902642-53902661 None:intergenic 45.0%
AGCACTTTCTCTTGCCCTAA+GGG + Chr7:53903945-53903964 None:intergenic 45.0%
AGGCATGCACTGAACACTAT+AGG - Chr7:53902590-53902609 MsG0780038841.01.T01:intron 45.0%
CAACTTTCATGGTATCCAGC+TGG + Chr7:53904324-53904343 None:intergenic 45.0%
CAATCATGCTTACAGGGTCA+TGG - Chr7:53901892-53901911 MsG0780038841.01.T01:intron 45.0%
CAGAGAAGAACTTCTTGCCA+TGG - Chr7:53902769-53902788 MsG0780038841.01.T01:intron 45.0%
CCTTCTTTGGTTGAAGCTAG+TGG - Chr7:53903297-53903316 MsG0780038841.01.T01:intron 45.0%
CTGCAGGTGGAACTAACAAA+AGG - Chr7:53903073-53903092 MsG0780038841.01.T01:intron 45.0%
GAAGAAGTTGCTGAGCATGT+TGG - Chr7:53902553-53902572 MsG0780038841.01.T01:intron 45.0%
GAGAAGAACTTCTTGCCATG+GGG - Chr7:53902771-53902790 MsG0780038841.01.T01:intron 45.0%
GCGTACAATACACCAAATGG+TGG + Chr7:53902060-53902079 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + Chr7:53902063-53902082 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG + Chr7:53902128-53902147 None:intergenic 45.0%
GTGGTTATAACCCAAAAGGC+AGG - Chr7:53903316-53903335 MsG0780038841.01.T01:intron 45.0%
GTTTAACGACTCTGACACTG+CGG - Chr7:53903391-53903410 MsG0780038841.01.T01:intron 45.0%
TCATGTGACTGAAAGGTCAC+GGG + Chr7:53902127-53902146 None:intergenic 45.0%
TCCAAATGCCTTGATGTCTG+CGG - Chr7:53903991-53904010 MsG0780038841.01.T01:intron 45.0%
TGACAGAACATTACAGCCGA+CGG + Chr7:53904179-53904198 None:intergenic 45.0%
TTCCAAAACACTACACCCTC+CGG - Chr7:53900356-53900375 MsG0780038841.01.T01:intron 45.0%
TTGTGAGTTAGGTCAAGGAG+CGG - Chr7:53901724-53901743 MsG0780038841.01.T01:intron 45.0%
! CCACTAGCTTCAACCAAAGA+AGG + Chr7:53903300-53903319 None:intergenic 45.0%
! CGACATATTGCCTTTTCCTC+TGG + Chr7:53903667-53903686 None:intergenic 45.0%
! GTCGGGTCCATCAGTTATTT+TGG - Chr7:53900729-53900748 MsG0780038841.01.T01:CDS 45.0%
! TAACCTTTGAGGGGTAACCT+TGG + Chr7:53902170-53902189 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG - Chr7:53902094-53902113 MsG0780038841.01.T01:intron 45.0%
!! AAAAGGCATCCAATAGAGGC+CGG - Chr7:53903090-53903109 MsG0780038841.01.T01:intron 45.0%
!! GGCAAGAGAAAGTGCTTATG+TGG - Chr7:53903949-53903968 MsG0780038841.01.T01:intron 45.0%
!!! TTTTTGGCGTTAGCATCGGT+CGG - Chr7:53900711-53900730 MsG0780038841.01.T01:CDS 45.0%
!!! TTAAATTTTTTTAATTTTGT+TGG - Chr7:53900848-53900867 MsG0780038841.01.T01:intron 5.0%
!!! TTTTACAAAATAATAAATAA+AGG + Chr7:53900960-53900979 None:intergenic 5.0%
AGAAGGGTCGTCGTTTCTTG+AGG + Chr7:53903283-53903302 None:intergenic 50.0%
ATCCAATAGAGGCCGGGAAA+AGG - Chr7:53903097-53903116 MsG0780038841.01.T01:intron 50.0%
CAACTTTACCAGTTGCGCCA+AGG - Chr7:53902150-53902169 MsG0780038841.01.T01:CDS 50.0%
GAACTTCTTGCCATGGGGAA+AGG - Chr7:53902776-53902795 MsG0780038841.01.T01:intron 50.0%
GCAGCATGTGTCTTGACTGA+GGG + Chr7:53903057-53903076 None:intergenic 50.0%
GTCGGCTGTAATGTTCTGTC+AGG - Chr7:53904178-53904197 MsG0780038841.01.T01:intron 50.0%
GTTTGGATCGAAGCGTGCTT+TGG - Chr7:53901608-53901627 MsG0780038841.01.T01:intron 50.0%
TATGTGGTCCCGAACAATCG+CGG - Chr7:53903965-53903984 MsG0780038841.01.T01:intron 50.0%
TCAGTCAAGACACATGCTGC+AGG - Chr7:53903057-53903076 MsG0780038841.01.T01:intron 50.0%
TGCAGCATGTGTCTTGACTG+AGG + Chr7:53903058-53903077 None:intergenic 50.0%
TGTGAGTTAGGTCAAGGAGC+GGG - Chr7:53901725-53901744 MsG0780038841.01.T01:intron 50.0%
TTCTTCATCCGCGTTCCAGT+CGG + Chr7:53902368-53902387 None:intergenic 50.0%
! AACTCAGAATCTGGAGCTGC+AGG - Chr7:53901202-53901221 MsG0780038841.01.T01:CDS 50.0%
! GAAGCATCTCATACCGGAAG+AGG + Chr7:53902643-53902662 None:intergenic 50.0%
! TCCGCAGACATCAAGGCATT+TGG + Chr7:53903995-53904014 None:intergenic 50.0%
! TTTGGAACCCCGCGATTGTT+CGG + Chr7:53903977-53903996 None:intergenic 50.0%
!! AAAGGCATCCAATAGAGGCC+GGG - Chr7:53903091-53903110 MsG0780038841.01.T01:intron 50.0%
!!! TTTTGGCGTTAGCATCGGTC+GGG - Chr7:53900712-53900731 MsG0780038841.01.T01:CDS 50.0%
AAGGAGCGGGTGAAGCGAAA+AGG - Chr7:53901738-53901757 MsG0780038841.01.T01:intron 55.0%
AAGGTCACGGGTTCAAGTCC+TGG + Chr7:53902115-53902134 None:intergenic 55.0%
ACTAGAGCTCCCGCATATGC+AGG - Chr7:53902019-53902038 MsG0780038841.01.T01:intron 55.0%
AGCAGAGTCCGCAGACATCA+AGG + Chr7:53904002-53904021 None:intergenic 55.0%
AGGAGCGGGTGAAGCGAAAA+GGG - Chr7:53901739-53901758 MsG0780038841.01.T01:intron 55.0%
ATGTGGTCCCGAACAATCGC+GGG - Chr7:53903966-53903985 MsG0780038841.01.T01:intron 55.0%
CATACCGGAAGAGGGAAGCA+TGG + Chr7:53902634-53902653 None:intergenic 55.0%
CTAGAGCTCCCGCATATGCA+GGG - Chr7:53902020-53902039 MsG0780038841.01.T01:intron 55.0%
CTCTCCATGCTTCCCTCTTC+CGG - Chr7:53902627-53902646 MsG0780038841.01.T01:intron 55.0%
GGCACACGGCACACTTAATC+CGG + Chr7:53901811-53901830 None:intergenic 55.0%
GGGCAGGGTGATGACAAGAA+AGG - Chr7:53902797-53902816 MsG0780038841.01.T01:intron 55.0%
GTCAAGACACATGCTGCAGG+TGG - Chr7:53903060-53903079 MsG0780038841.01.T01:intron 55.0%
TCCAGTCGGGGCAAATGAGA+GGG + Chr7:53902354-53902373 None:intergenic 55.0%
TCTTCATCCGCGTTCCAGTC+GGG + Chr7:53902367-53902386 None:intergenic 55.0%
TGCTCATCGGATGTTCCAGC+TGG - Chr7:53904306-53904325 MsG0780038841.01.T01:intron 55.0%
TTCCAGTCGGGGCAAATGAG+AGG + Chr7:53902355-53902374 None:intergenic 55.0%
TTGGAACCCCGCGATTGTTC+GGG + Chr7:53903976-53903995 None:intergenic 55.0%
! CACCTTTTCCCGGCCTCTAT+TGG + Chr7:53903102-53903121 None:intergenic 55.0%
! GGCTTGATGAAAGAGAGCGC+AGG - Chr7:53903582-53903601 MsG0780038841.01.T01:intron 55.0%
!! GACCGGAGGGTGTAGTGTTT+TGG + Chr7:53900361-53900380 None:intergenic 55.0%
ACCCTCTCATTTGCCCCGAC+TGG - Chr7:53902350-53902369 MsG0780038841.01.T01:intron 60.0%
AGGGGTAACCTTGGCGCAAC+TGG + Chr7:53902161-53902180 None:intergenic 60.0%
ATCACCCTGCCCTTTCCCCA+TGG + Chr7:53902789-53902808 None:intergenic 60.0%
CATATGCAGGGTCCGGGAAG+GGG - Chr7:53902032-53902051 MsG0780038841.01.T01:intron 60.0%
CATTTGCCCCGACTGGAACG+CGG - Chr7:53902357-53902376 MsG0780038841.01.T01:intron 60.0%
CTGCTGATCCCAGACCTGCA+GGG - Chr7:53904017-53904036 MsG0780038841.01.T01:intron 60.0%
CTTCATCCGCGTTCCAGTCG+GGG + Chr7:53902366-53902385 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + Chr7:53902032-53902051 None:intergenic 60.0%
CTTGAAGTAGCTCGCCCTGC+AGG + Chr7:53904034-53904053 None:intergenic 60.0%
CTTGCCATGGGGAAAGGGCA+GGG - Chr7:53902782-53902801 MsG0780038841.01.T01:intron 60.0%
GCATATGCAGGGTCCGGGAA+GGG - Chr7:53902031-53902050 MsG0780038841.01.T01:intron 60.0%
GCGCCAAGGTTACCCCTCAA+AGG - Chr7:53902164-53902183 MsG0780038841.01.T01:CDS 60.0%
TCTGCTGATCCCAGACCTGC+AGG - Chr7:53904016-53904035 MsG0780038841.01.T01:intron 60.0%
TCTTGCCATGGGGAAAGGGC+AGG - Chr7:53902781-53902800 MsG0780038841.01.T01:intron 60.0%
TGTGGTCCCGAACAATCGCG+GGG - Chr7:53903967-53903986 MsG0780038841.01.T01:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + Chr7:53902031-53902050 None:intergenic 60.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + Chr7:53902015-53902034 None:intergenic 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + Chr7:53902047-53902066 None:intergenic 60.0%
AGTAGCTCGCCCTGCAGGTC+TGG + Chr7:53904029-53904048 None:intergenic 65.0%
CGCATATGCAGGGTCCGGGA+AGG - Chr7:53902030-53902049 MsG0780038841.01.T01:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - Chr7:53902045-53902064 MsG0780038841.01.T01:intron 65.0%
CTCCCGCATATGCAGGGTCC+GGG - Chr7:53902026-53902045 MsG0780038841.01.T01:intron 65.0%
GCTCCCGCATATGCAGGGTC+CGG - Chr7:53902025-53902044 MsG0780038841.01.T01:intron 65.0%
GTAGCTCGCCCTGCAGGTCT+GGG + Chr7:53904028-53904047 None:intergenic 65.0%
TCGCAGGAAGCTCGTGCTGC+TGG - Chr7:53903888-53903907 MsG0780038841.01.T01:intron 65.0%
! TGCGGGAGCTCTAGTGCACC+GGG + Chr7:53902014-53902033 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr7 gene 53899662 53904390 53899662 ID=MsG0780038841.01;Name=MsG0780038841.01
Chr7 mRNA 53899662 53904390 53899662 ID=MsG0780038841.01.T01;Parent=MsG0780038841.01;Name=MsG0780038841.01.T01;_AED=0.26;_eAED=0.29;_QI=0|0|0|1|0.75|0.77|9|0|364
Chr7 exon 53904341 53904390 53904341 ID=MsG0780038841.01.T01:exon:6025;Parent=MsG0780038841.01.T01
Chr7 exon 53902829 53902884 53902829 ID=MsG0780038841.01.T01:exon:6024;Parent=MsG0780038841.01.T01
Chr7 exon 53902139 53902317 53902139 ID=MsG0780038841.01.T01:exon:6023;Parent=MsG0780038841.01.T01
Chr7 exon 53901650 53901715 53901650 ID=MsG0780038841.01.T01:exon:6022;Parent=MsG0780038841.01.T01
Chr7 exon 53901404 53901529 53901404 ID=MsG0780038841.01.T01:exon:6021;Parent=MsG0780038841.01.T01
Chr7 exon 53901174 53901309 53901174 ID=MsG0780038841.01.T01:exon:6020;Parent=MsG0780038841.01.T01
Chr7 exon 53900701 53900808 53900701 ID=MsG0780038841.01.T01:exon:6019;Parent=MsG0780038841.01.T01
Chr7 exon 53899951 53900158 53899951 ID=MsG0780038841.01.T01:exon:6018;Parent=MsG0780038841.01.T01
Chr7 exon 53899662 53899827 53899662 ID=MsG0780038841.01.T01:exon:6017;Parent=MsG0780038841.01.T01
Chr7 CDS 53904341 53904390 53904341 ID=MsG0780038841.01.T01:cds;Parent=MsG0780038841.01.T01
Chr7 CDS 53902829 53902884 53902829 ID=MsG0780038841.01.T01:cds;Parent=MsG0780038841.01.T01
Chr7 CDS 53902139 53902317 53902139 ID=MsG0780038841.01.T01:cds;Parent=MsG0780038841.01.T01
Chr7 CDS 53901650 53901715 53901650 ID=MsG0780038841.01.T01:cds;Parent=MsG0780038841.01.T01
Chr7 CDS 53901404 53901529 53901404 ID=MsG0780038841.01.T01:cds;Parent=MsG0780038841.01.T01
Chr7 CDS 53901174 53901309 53901174 ID=MsG0780038841.01.T01:cds;Parent=MsG0780038841.01.T01
Chr7 CDS 53900701 53900808 53900701 ID=MsG0780038841.01.T01:cds;Parent=MsG0780038841.01.T01
Chr7 CDS 53899951 53900158 53899951 ID=MsG0780038841.01.T01:cds;Parent=MsG0780038841.01.T01
Chr7 CDS 53899662 53899827 53899662 ID=MsG0780038841.01.T01:cds;Parent=MsG0780038841.01.T01
Gene Sequence

>MsG0780038841.01.T01

ATGGAGGTTTATCCTAAGAAAAAAGCATCGATCGAGGCATTAAAAGAGTTGTCAAGGAAAAAGAAGAATGCTGCAAGTGGAGATAACTCAGAATCTGGAGCTGCAGGTCAAGGAGCGGGTGAAGCGAAAAGGGCTCTGTATCATTGCAATTACTGTAATATCGATATTACAGGACAAATCCGGATTAAGTGTGCCGTGTGCCCAGATTTTGACTTATGTGTTGAGTGCTTTTCTGTTGGAGCTGAGCTGACACCCCACAAAAGCAATCATGCTTACAGGGTCATGGATAATTTGTCTTACCCTCTCATTTGCCCCGACTGGAACGCGGATGAAGAAATTTTGCTTCTAGAGGGACTTGAAATGTATGGCATGAATAACTGGGAAGAAGTTGCTGAGCATGTTGGAACAAAGAACAAAGAGGCATGCACTGAACACTATAGGATTGTGTACTTGGACTCTCCATGCTTCCCTCTTCCGGATATGTCTCATGTTGTTGGAAAAAGCAGAGAAGAACTTCTTGCCATGGGGAAAGGGCAGGGTGATGACAAGAAAGGTTTGTCACAAATCACAATACTGACATCACATGCATTAATTTTTGTAGTTTTTAGTTTTTACTCCTTAAGAAATTCTGGAGGAAATAAGCCAAAATCCTCAAGAAACGACGACCCTTCTTTGGTTGAAGCTAGTGGTTATAACCCAAAAGGCAGGAATTTGATATTGAGAAGCTCGTGCTGCTGGAAAAAGAGAAGAACTGAAGTTGAAGAAAGTGCCCTTAGGGCAAGAGAAAGTGCTTATGTGGTCCCGAACAATCGCGGGGTTCCAAATGCCTTGATGTCTGCGGACTCTGCTGATCCCAGACCTGCAGGGCGAGCTACTTCAAGTTATGTCAATGAAATGATGCTGCAGGAGCGAATTTACTTTCTGAAGCTGGTTGCCTCCAACTGTGTATCTGAAGATGCAAGAGGAGCTGTCAGTACAAATGATTGCTGGAAACGTCTCTTCAAATCTGATGCTCATCGGATGTTCCAGCTGGATACCATGAAAGTTGACATGGTGTATGATATGCTCATTAAGAAGGGATTTGGTTCACCCTGA
Protein sequence

>MsG0780038841.01.T01

MEVYPKKKASIEALKELSRKKKNAASGDNSESGAAGQGAGEAKRALYHCNYCNIDITGQIRIKCAVCPDFDLCVECFSVGAELTPHKSNHAYRVMDNLSYPLICPDWNADEEILLLEGLEMYGMNNWEEVAEHVGTKNKEACTEHYRIVYLDSPCFPLPDMSHVVGKSREELLAMGKGQGDDKKGLSQITILTSHALIFVVFSFYSLRNSGGNKPKSSRNDDPSLVEASGYNPKGRNLILRSSCCWKKRRTEVEESALRARESAYVVPNNRGVPNALMSADSADPRPAGRATSSYVNEMMLQERIYFLKLVASNCVSEDARGAVSTNDCWKRLFKSDAHRMFQLDTMKVDMVYDMLIKKGFGSP*