AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039980.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039980.01.T01 MTR_8g073345 53.383 133 54 3 1 126 1 132 9.05e-32 120
MsG0780039980.01.T01 MTR_5g024180 52.344 128 52 4 1 120 1 127 2.69e-29 113
MsG0780039980.01.T01 MTR_8g073345 52.756 127 52 3 1 120 1 126 2.37e-28 110
MsG0780039980.01.T01 MTR_7g082820 63.855 83 27 2 23 103 4 85 6.44e-25 101
MsG0780039980.01.T01 MTR_3g115580 57.143 77 31 1 27 101 40 116 1.92e-20 89.0
MsG0780039980.01.T01 MTR_7g068280 49.495 99 48 1 28 124 47 145 1.02e-19 87.0
MsG0780039980.01.T01 MTR_5g024180 54.217 83 35 2 41 120 8 90 3.32e-18 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039980.01.T01 AT1G20693 52.632 114 45 2 23 127 29 142 7.89e-26 103
MsG0780039980.01.T01 AT3G51880 53.846 104 43 2 23 124 44 144 2.82e-25 103
MsG0780039980.01.T01 AT3G51880 53.846 104 43 2 23 124 44 144 4.09e-25 102
MsG0780039980.01.T01 AT3G51880 53.846 104 43 2 23 124 44 144 4.09e-25 102
MsG0780039980.01.T01 AT3G51880 53.846 104 43 2 23 124 44 144 4.09e-25 102
MsG0780039980.01.T01 AT1G20696 52.000 100 46 1 23 120 26 125 2.17e-23 96.7
MsG0780039980.01.T01 AT2G17560 44.961 129 67 3 4 128 6 134 3.02e-23 96.3
MsG0780039980.01.T01 AT3G51880 53.000 100 42 2 23 120 44 140 4.28e-23 96.7
MsG0780039980.01.T01 AT1G20696 53.261 92 41 1 23 112 26 117 5.57e-23 95.9
MsG0780039980.01.T01 AT1G20693 53.000 100 45 1 23 120 29 128 6.13e-23 95.5
MsG0780039980.01.T01 AT1G20693 53.000 100 45 1 23 120 29 128 6.30e-23 95.5
MsG0780039980.01.T01 AT2G17560 45.113 133 66 4 4 129 6 138 9.95e-23 94.7
MsG0780039980.01.T01 AT2G17560 45.113 133 66 4 4 129 6 138 9.95e-23 94.7
MsG0780039980.01.T01 AT1G20696 55.422 83 35 1 23 103 26 108 6.48e-22 92.4
MsG0780039980.01.T01 AT1G20696 51.000 100 43 3 40 137 1 96 9.98e-21 87.8
MsG0780039980.01.T01 AT4G35570 39.216 102 60 1 3 102 5 106 9.20e-19 83.2
MsG0780039980.01.T01 AT4G35570 39.216 102 60 1 3 102 5 106 9.20e-19 83.2
MsG0780039980.01.T01 AT1G20696 50.602 83 39 1 40 120 1 83 3.96e-18 80.5

Find 145 sgRNAs with CRISPR-Local

Find 312 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACTGGACCCCTTGGATTTC+AGG 0.152107 7:-71410282 None:intergenic
TATTGATGTCTTTATCAATT+TGG 0.184499 7:+71410890 MsG0780039980.01.T01:CDS
CTTCTTCACCAAGCCGTCTT+TGG 0.224000 7:-71410721 None:intergenic
AAGCTAAGAAGGATCCTTTC+AGG 0.245570 7:+71407016 MsG0780039980.01.T01:CDS
GGTCGGTCCTCCGCGGCTGC+TGG 0.249849 7:+71410441 MsG0780039980.01.T01:CDS
AGATTTCAACCAATCGTTAT+TGG 0.249984 7:-71409275 None:intergenic
TTAGCTTTCTTAAACTCCTT+TGG 0.275178 7:-71407000 None:intergenic
AGAGGCAGTTGTTGCTTTAG+AGG 0.285099 7:-71410591 None:intergenic
AGTCTTGGCTATACTTAAAA+AGG 0.299580 7:+71409552 MsG0780039980.01.T01:CDS
ATTTGGCCGGCTGTTTGGTC+AGG 0.310632 7:+71409386 MsG0780039980.01.T01:CDS
TTTGGATTTGGCCGGCTGTT+TGG 0.319266 7:+71409381 MsG0780039980.01.T01:CDS
TCCTGCATCAAGGACTAATA+AGG 0.345923 7:+71410086 MsG0780039980.01.T01:CDS
AGGGGTCCAGTCGAAGCCTT+TGG 0.352623 7:+71410293 MsG0780039980.01.T01:CDS
TAGTGCCTGTGCTCGACAAA+TGG 0.353781 7:+71409162 MsG0780039980.01.T01:CDS
TTCAATTAGGTTGGTAAAGC+TGG 0.354056 7:+71407614 MsG0780039980.01.T01:intron
ATGATGAACTCACCGGTTAT+TGG 0.361635 7:-71406871 None:intergenic
CCGGCCAAATCCAAATGGTT+GGG 0.369508 7:-71409373 None:intergenic
ACATGACCAGAATTGAATTC+TGG 0.383050 7:-71409124 None:intergenic
AGTTTCCCAGAATTCAATTC+TGG 0.396065 7:+71409118 MsG0780039980.01.T01:intron
GTCGGTCCTCCGCGGCTGCT+GGG 0.398746 7:+71410442 MsG0780039980.01.T01:CDS
TTCACCGCTTGCTTGTAAAC+AGG 0.417534 7:-71410696 None:intergenic
GAGACTAGTGTCGAAGCCTT+TGG 0.417849 7:+71410506 MsG0780039980.01.T01:CDS
CCCAACCATTTGGATTTGGC+CGG 0.418972 7:+71409373 MsG0780039980.01.T01:CDS
ATCAGACTGCGAAAACTCTA+AGG 0.419587 7:+71410958 MsG0780039980.01.T01:CDS
GGTCAGAACCTTACTATTGT+AGG 0.422560 7:-71407819 None:intergenic
AAAAGTACGTCAAGGGGAAC+TGG 0.426418 7:-71411057 None:intergenic
TCTCTTCGACTATTGACCTT+TGG 0.426555 7:+71409295 MsG0780039980.01.T01:CDS
ACGTCAAGGGGAACTGGATT+GGG 0.432504 7:-71411051 None:intergenic
TAAAACTGTTAATGAAGTCT+TGG 0.434543 7:+71409537 MsG0780039980.01.T01:CDS
ACGCAAAACCCTCCAATAAC+CGG 0.444454 7:+71406859 MsG0780039980.01.T01:CDS
CATGACCAGAATTGAATTCT+GGG 0.448042 7:-71409123 None:intergenic
TTATGCTGAAGTGTGTGCTT+GGG 0.449769 7:+71409218 MsG0780039980.01.T01:CDS
TACGTCAAGGGGAACTGGAT+TGG 0.450076 7:-71411052 None:intergenic
GGGGTCCAGTCGAAGCCTTT+GGG 0.451912 7:+71410294 MsG0780039980.01.T01:CDS
GGAGTTTAAGAAAGCTAAGA+AGG 0.462436 7:+71407005 MsG0780039980.01.T01:CDS
AGTGCCTGTGCTCGACAAAT+GGG 0.464498 7:+71409163 MsG0780039980.01.T01:CDS
AGCAAGAGACAATTAAGGTC+AGG 0.471525 7:+71410793 MsG0780039980.01.T01:CDS
ACCTTATTAGTCCTTGATGC+AGG 0.473479 7:-71410087 None:intergenic
AGGTCAATTGCTTCTTGAGT+TGG 0.479210 7:-71410833 None:intergenic
TTTGGCCGGCTGTTTGGTCA+GGG 0.479299 7:+71409387 MsG0780039980.01.T01:CDS
TGATCTGCTCAAGAGTACTT+TGG 0.480608 7:-71410620 None:intergenic
AAAACAGCAAGAGACAATTA+AGG 0.486983 7:+71410788 MsG0780039980.01.T01:CDS
TTTCTTAAACTCCTTTGGAC+TGG 0.488433 7:-71406995 None:intergenic
AGCTAATTCCGCCTCAGCTA+AGG 0.489557 7:-71410853 None:intergenic
GCCGGCCAAATCCAAATGGT+TGG 0.490114 7:-71409374 None:intergenic
CAATACGCTCTTGCTGAACC+TGG 0.490211 7:-71410338 None:intergenic
AAAGAAAGCAAGTCATCTGC+GGG 0.491105 7:-71410381 None:intergenic
GACTAATAAGGTAACACAAA+TGG 0.491795 7:+71410098 MsG0780039980.01.T01:CDS
TGATTTCAGAGTGATGTTCA+TGG 0.493514 7:+71407240 MsG0780039980.01.T01:CDS
TATCCGCAATATGCTCAACT+TGG 0.496870 7:-71409453 None:intergenic
GGGAATAAATAATGTGAGAG+AGG 0.499316 7:+71408115 MsG0780039980.01.T01:CDS
AAGCATTCTTTGAGACATGA+AGG 0.500991 7:-71410656 None:intergenic
CAGGTTCAGCAAGAGCGTAT+TGG 0.502666 7:+71410339 MsG0780039980.01.T01:CDS
AAGGCTTCGACTGGACCCCT+TGG 0.505948 7:-71410290 None:intergenic
AATCAGATGAGGAGGCTAGT+TGG 0.506414 7:+71410558 MsG0780039980.01.T01:CDS
CGTTGTTGCCTGAAATCCAA+GGG 0.509705 7:+71410274 MsG0780039980.01.T01:CDS
ATTATGCTGAAGTGTGTGCT+TGG 0.509982 7:+71409217 MsG0780039980.01.T01:CDS
CGGCCAAATCCAAATGGTTG+GGG 0.513077 7:-71409372 None:intergenic
ATTTGTCGAGCACAGGCACT+AGG 0.513385 7:-71409160 None:intergenic
GAAGTGTGTGCTTGGGGTTG+AGG 0.524691 7:+71409225 MsG0780039980.01.T01:CDS
CTTGCTGAACCTGGTGAAGT+AGG 0.528144 7:-71410329 None:intergenic
AACAGCCGGCCAAATCCAAA+TGG 0.529017 7:-71409378 None:intergenic
TCGTTGTTGCCTGAAATCCA+AGG 0.529974 7:+71410273 MsG0780039980.01.T01:CDS
ATGAACAGAAAGAAAGGAGA+TGG 0.533421 7:-71407051 None:intergenic
ACAGCGACGGATGTATTGAA+TGG 0.535641 7:-71407271 None:intergenic
ATGTGTCTTGTCCTGCATCA+AGG 0.536270 7:+71410076 MsG0780039980.01.T01:CDS
ATTGGGTAATCACCAACAAC+AGG 0.537894 7:-71411034 None:intergenic
ATGAACTCACCGGTTATTGG+AGG 0.539524 7:-71406868 None:intergenic
AGGTTATCTGTTGGACCCAA+AGG 0.540225 7:-71410309 None:intergenic
ACTTACATGAACAGAAAGAA+AGG 0.543348 7:-71407057 None:intergenic
TTGTCGACAGAGGAAGTTGA+AGG 0.544379 7:-71410246 None:intergenic
ACAAATGGTTGGTACTTCCA+AGG 0.544568 7:+71410113 MsG0780039980.01.T01:CDS
TTGGACCCAAAGGCTTCGAC+TGG 0.547806 7:-71410299 None:intergenic
GCTGCATGCCTACAATAGTA+AGG 0.554165 7:+71407811 MsG0780039980.01.T01:CDS
AAAGACATCAATACCAGTGT+TGG 0.556745 7:-71410880 None:intergenic
CAAGGCTCCTTACATTGCTA+TGG 0.559156 7:+71407763 MsG0780039980.01.T01:CDS
TGTGCTTGGGGTTGAGGCGA+AGG 0.560398 7:+71409231 MsG0780039980.01.T01:CDS
ATCCGCAATATGCTCAACTT+GGG 0.560447 7:-71409452 None:intergenic
CCAGAAAACGCAGAAGCTGC+AGG 0.561843 7:-71410420 None:intergenic
GTCAGCCCTGACCAAACAGC+CGG 0.565476 7:-71409392 None:intergenic
CTTTAGGATGAGGATGATGA+GGG 0.566849 7:+71408095 MsG0780039980.01.T01:intron
CCGCTTGCTTGTAAACAGGA+AGG 0.567537 7:-71410692 None:intergenic
TAGTCACAAAGGATCGTTGT+GGG 0.570845 7:-71409513 None:intergenic
AGAACTTGAGGACCTGTTGT+TGG 0.572376 7:+71411022 MsG0780039980.01.T01:CDS
GGTGAATTCCAAAGACGGCT+TGG 0.573461 7:+71410713 MsG0780039980.01.T01:CDS
TGAACCCATTTGTCGAGCAC+AGG 0.574504 7:-71409167 None:intergenic
AGCACACATGAGGCTTGCAT+AGG 0.575293 7:+71409319 MsG0780039980.01.T01:CDS
GAGGAAGTTGAAGGGGAAGG+AGG 0.575735 7:-71410237 None:intergenic
ATCAACTAAGAAAGAACTTG+AGG 0.576732 7:+71411010 MsG0780039980.01.T01:CDS
ACTTTAGGATGAGGATGATG+AGG 0.578881 7:+71408094 MsG0780039980.01.T01:intron
ACAGAGGAAGTTGAAGGGGA+AGG 0.579857 7:-71410240 None:intergenic
CGCTTGCTTGTAAACAGGAA+GGG 0.581273 7:-71410691 None:intergenic
ACAAGACACATTTCTGTCAC+CGG 0.582444 7:-71410064 None:intergenic
AGAGTACTTTGGCTTGAGAG+AGG 0.584236 7:-71410609 None:intergenic
GACCTTTGGCAGCACACATG+AGG 0.585326 7:+71409309 MsG0780039980.01.T01:CDS
GATTGATTCTAGTGTAGCCA+TGG 0.588630 7:+71410464 MsG0780039980.01.T01:CDS
GCACACATGAGGCTTGCATA+GGG 0.589269 7:+71409320 MsG0780039980.01.T01:CDS
CCTTCCTGTTTACAAGCAAG+CGG 0.591763 7:+71410692 MsG0780039980.01.T01:CDS
GTCTGGAGTCAACGATGAGG+AGG 0.593966 7:+71407978 MsG0780039980.01.T01:CDS
TCATCGACACCAATAACGAT+TGG 0.595226 7:+71409266 MsG0780039980.01.T01:CDS
TGAACTCACCGGTTATTGGA+GGG 0.595630 7:-71406867 None:intergenic
CAAAGAAAGCAAGTCATCTG+CGG 0.596889 7:-71410382 None:intergenic
CAAGTTAAAAGTACGTCAAG+GGG 0.597475 7:-71411063 None:intergenic
TGTCGACAGAGGAAGTTGAA+GGG 0.597715 7:-71410245 None:intergenic
CACTTCAGCATAATTTCAGA+AGG 0.598778 7:-71409208 None:intergenic
CTGATTCACCTCGTCACGAA+GGG 0.600227 7:-71410940 None:intergenic
TATGGCAGAAAAGAAGAAAG+AGG 0.601680 7:+71407781 MsG0780039980.01.T01:CDS
GCAATTGACCTTAGCTGAGG+CGG 0.601942 7:+71410845 MsG0780039980.01.T01:CDS
GGATGGCTCTGAAACCTGAA+AGG 0.602884 7:-71407030 None:intergenic
GCAAGAGACAATTAAGGTCA+GGG 0.602913 7:+71410794 MsG0780039980.01.T01:CDS
CATCAATGCCCTTCGTGACG+AGG 0.603612 7:+71410932 MsG0780039980.01.T01:CDS
AACAGATAACCTACTTCACC+AGG 0.605001 7:+71410320 MsG0780039980.01.T01:CDS
TTGCATTCAATCAGATGAGG+AGG 0.607594 7:+71410550 MsG0780039980.01.T01:CDS
TCAGCAGAAGCAACGTCCAA+AGG 0.607772 7:-71410522 None:intergenic
TTTGTCGAGCACAGGCACTA+GGG 0.610480 7:-71409159 None:intergenic
ATCAATCCCAGCAGCCGCGG+AGG 0.613151 7:-71410448 None:intergenic
TGGTGAAGTAGGTTATCTGT+TGG 0.614394 7:-71410318 None:intergenic
TAGGTTTGAAACCAGTCCAA+AGG 0.614410 7:+71406984 MsG0780039980.01.T01:intron
CCTCATCTGATTGAATGCAA+AGG 0.614532 7:-71410547 None:intergenic
AATAAGGTAACACAAATGGT+TGG 0.615126 7:+71410102 MsG0780039980.01.T01:CDS
ACAGAAAGAAAGGAGATGGA+TGG 0.616223 7:-71407047 None:intergenic
TATGCTGAAGTGTGTGCTTG+GGG 0.617274 7:+71409219 MsG0780039980.01.T01:CDS
AGCATAATTTCAGAAGGACA+AGG 0.619720 7:-71409202 None:intergenic
GTCGACAGAGGAAGTTGAAG+GGG 0.622792 7:-71410244 None:intergenic
AGAAGCTGCAGGACTTGAGT+CGG 0.623712 7:-71410409 None:intergenic
GACAAAACTCACAACAGCGA+CGG 0.624222 7:-71407284 None:intergenic
AGCATTCTTTGAGACATGAA+GGG 0.625562 7:-71410655 None:intergenic
GAATTAGCTGAAGCCAACAC+TGG 0.627314 7:+71410867 MsG0780039980.01.T01:CDS
AATTTCAGAAGGACAAGGAG+TGG 0.630911 7:-71409197 None:intergenic
TCTGATTCACCTCGTCACGA+AGG 0.634897 7:-71410941 None:intergenic
AGCCTCATGTGTGCTGCCAA+AGG 0.637642 7:-71409311 None:intergenic
CCTTTGCATTCAATCAGATG+AGG 0.638173 7:+71410547 MsG0780039980.01.T01:CDS
AACCCAAGTTGAGCATATTG+CGG 0.639976 7:+71409450 MsG0780039980.01.T01:CDS
CAAGCGGTGAATTCCAAAGA+CGG 0.642422 7:+71410708 MsG0780039980.01.T01:CDS
TAGCTGTTGAAAGAATTGCT+TGG 0.646051 7:+71407931 MsG0780039980.01.T01:intron
AATTAGGTTGGTAAAGCTGG+CGG 0.647731 7:+71407617 MsG0780039980.01.T01:intron
AGAATCAATCCCAGCAGCCG+CGG 0.662347 7:-71410451 None:intergenic
GAAGCAATTGACCTTAGCTG+AGG 0.673616 7:+71410842 MsG0780039980.01.T01:CDS
GTCGAGCACAGGCACTAGGG+AGG 0.676631 7:-71409156 None:intergenic
AGAGTCTGGAGTCAACGATG+AGG 0.682329 7:+71407975 MsG0780039980.01.T01:CDS
CAACGAAGACTTGTCGACAG+AGG 0.689461 7:-71410256 None:intergenic
ATAGTCACAAAGGATCGTTG+TGG 0.692151 7:-71409514 None:intergenic
GGCCAAATCCAAATGGTTGG+GGG 0.696204 7:-71409371 None:intergenic
GTTGTTGCCTGAAATCCAAG+GGG 0.714579 7:+71410275 MsG0780039980.01.T01:CDS
AAGAAAGCAAGTCATCTGCG+GGG 0.759552 7:-71410380 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTTAAAATGATAGA+AGG + Chr7:71408877-71408896 MsG0780039980.01.T01:intron 10.0%
!!! TTTAAAGTAAACATTATTAA+TGG - Chr7:71408213-71408232 None:intergenic 10.0%
!! ATAAAACATTATAGTCATAA+TGG - Chr7:71409852-71409871 None:intergenic 15.0%
!!! TTCTTAAAATTTGGAATTAA+AGG - Chr7:71409628-71409647 None:intergenic 15.0%
!!! TTGATTTTAATATTGTTTTG+TGG + Chr7:71407722-71407741 MsG0780039980.01.T01:intron 15.0%
!! ATATGTTATTATGGTATGTT+TGG + Chr7:71408540-71408559 MsG0780039980.01.T01:intron 20.0%
!! GATATAAACAGTTATAATTG+GGG - Chr7:71410166-71410185 None:intergenic 20.0%
!! GGATATAAACAGTTATAATT+GGG - Chr7:71410167-71410186 None:intergenic 20.0%
!! GGTGAAATAATATGTTATTA+TGG + Chr7:71408531-71408550 MsG0780039980.01.T01:intron 20.0%
!! TAACAAATGAAAAAGAGAAA+AGG - Chr7:71406925-71406944 None:intergenic 20.0%
!! TATATCTTGAACAAGTTAAT+TGG + Chr7:71408692-71408711 MsG0780039980.01.T01:intron 20.0%
!! TATTGATGTCTTTATCAATT+TGG + Chr7:71410890-71410909 MsG0780039980.01.T01:CDS 20.0%
!!! GTATTTTGATAAATTTGTCA+TGG + Chr7:71408577-71408596 MsG0780039980.01.T01:intron 20.0%
!!! TGATTGCTTTATTTTTATCT+TGG + Chr7:71407865-71407884 MsG0780039980.01.T01:intron 20.0%
!!! TTGATTTGTTTATGTACTTT+AGG + Chr7:71408079-71408098 MsG0780039980.01.T01:intron 20.0%
!!! TTTTGTTTTGTTATGTTTAC+AGG + Chr7:71407215-71407234 MsG0780039980.01.T01:intron 20.0%
! AAAAACGTTATAGGCTTAAA+TGG + Chr7:71409488-71409507 MsG0780039980.01.T01:CDS 25.0%
! AAACATTTAATAACAACAGC+AGG - Chr7:71407121-71407140 None:intergenic 25.0%
! AAGTAAGAATGCGAAAAAAA+TGG - Chr7:71406899-71406918 None:intergenic 25.0%
! AATGTAAAAACTGCTGAAAA+GGG + Chr7:71408914-71408933 MsG0780039980.01.T01:intron 25.0%
! ATATACTTAACATGTATGAC+TGG + Chr7:71408446-71408465 MsG0780039980.01.T01:intron 25.0%
! GGGATATAAACAGTTATAAT+TGG - Chr7:71410168-71410187 None:intergenic 25.0%
! TAAAACTGTTAATGAAGTCT+TGG + Chr7:71409537-71409556 MsG0780039980.01.T01:CDS 25.0%
! TAAGGAAGCTTCTTAAAATT+TGG - Chr7:71409637-71409656 None:intergenic 25.0%
! TATACTTAACATGTATGACT+GGG + Chr7:71408447-71408466 MsG0780039980.01.T01:intron 25.0%
! TATGGTATGTTTGGATTTAA+AGG + Chr7:71408549-71408568 MsG0780039980.01.T01:intron 25.0%
!! TCATTTTCTTTGTAACGTAT+TGG + Chr7:71409093-71409112 MsG0780039980.01.T01:intron 25.0%
!! TTGTTTTCATTTTGTTCGTT+AGG + Chr7:71406965-71406984 MsG0780039980.01.T01:intron 25.0%
!! TTTTCTTTTTGTTCTTTGAG+AGG - Chr7:71410753-71410772 None:intergenic 25.0%
!!! AACAGTTTTAATAGTCACAA+AGG - Chr7:71409527-71409546 None:intergenic 25.0%
!!! AATCGACTTTTAAGTTTACA+TGG + Chr7:71410014-71410033 MsG0780039980.01.T01:intron 25.0%
!!! ATTTGCTGTGAATTTCAATT+AGG + Chr7:71407601-71407620 MsG0780039980.01.T01:intron 25.0%
AAAACAGCAAGAGACAATTA+AGG + Chr7:71410788-71410807 MsG0780039980.01.T01:CDS 30.0%
AACATTATTAATGGCCAACA+AGG - Chr7:71408204-71408223 None:intergenic 30.0%
AATAAGGTAACACAAATGGT+TGG + Chr7:71410102-71410121 MsG0780039980.01.T01:CDS 30.0%
ACATTATTAATGGCCAACAA+GGG - Chr7:71408203-71408222 None:intergenic 30.0%
ACCAGTGAAAGTTTAAATCA+AGG + Chr7:71408662-71408681 MsG0780039980.01.T01:intron 30.0%
ACCTGTCTGATAAATTTCAT+AGG + Chr7:71409771-71409790 MsG0780039980.01.T01:intron 30.0%
ACTGTAAAAAACATGAAAGC+AGG + Chr7:71408800-71408819 MsG0780039980.01.T01:intron 30.0%
ACTTACATGAACAGAAAGAA+AGG - Chr7:71407060-71407079 None:intergenic 30.0%
AGATTTCAACCAATCGTTAT+TGG - Chr7:71409278-71409297 None:intergenic 30.0%
AGGTAAAAACAGAAGTAGTT+TGG - Chr7:71407101-71407120 None:intergenic 30.0%
AGTCTTGGCTATACTTAAAA+AGG + Chr7:71409552-71409571 MsG0780039980.01.T01:CDS 30.0%
AGTTTCCACATCAATTAATG+AGG + Chr7:71407451-71407470 MsG0780039980.01.T01:intron 30.0%
ATAAATTTGTCATGGTAGCA+AGG + Chr7:71408585-71408604 MsG0780039980.01.T01:intron 30.0%
ATCAACTAAGAAAGAACTTG+AGG + Chr7:71411010-71411029 MsG0780039980.01.T01:CDS 30.0%
ATCATTCGATAATGTACTGA+CGG - Chr7:71407513-71407532 None:intergenic 30.0%
CCTGTCTGATAAATTTCATA+GGG + Chr7:71409772-71409791 MsG0780039980.01.T01:intron 30.0%
CTCTTATGTGTTTCTTTGTT+AGG + Chr7:71408024-71408043 MsG0780039980.01.T01:intron 30.0%
GAATGTAAAAACTGCTGAAA+AGG + Chr7:71408913-71408932 MsG0780039980.01.T01:intron 30.0%
GACTAATAAGGTAACACAAA+TGG + Chr7:71410098-71410117 MsG0780039980.01.T01:CDS 30.0%
GGCAAATATTTGCAAAGATA+GGG + Chr7:71408341-71408360 MsG0780039980.01.T01:intron 30.0%
GTTGAATGATACATAGCAAA+TGG - Chr7:71408169-71408188 None:intergenic 30.0%
TAAATTTGTCATGGTAGCAA+GGG + Chr7:71408586-71408605 MsG0780039980.01.T01:intron 30.0%
TAACTGTTTATATCCCGTAA+TGG + Chr7:71410172-71410191 MsG0780039980.01.T01:intron 30.0%
TCATACCTCATTAATTGATG+TGG - Chr7:71407459-71407478 None:intergenic 30.0%
TGGCAAATATTTGCAAAGAT+AGG + Chr7:71408340-71408359 MsG0780039980.01.T01:intron 30.0%
TTCACCTCTTCATTAATCTT+TGG - Chr7:71408517-71408536 None:intergenic 30.0%
TTCTTTGTTAGGTGTTCATA+TGG + Chr7:71408035-71408054 MsG0780039980.01.T01:intron 30.0%
TTGTGGTTTATGTGTATTTC+AGG + Chr7:71407739-71407758 MsG0780039980.01.T01:intron 30.0%
TTTATGTGTATTTCAGGACA+AGG + Chr7:71407745-71407764 MsG0780039980.01.T01:intron 30.0%
! AAGCCTATAACGTTTTTGAA+AGG - Chr7:71409485-71409504 None:intergenic 30.0%
! CAGTTCTTTAAAAAGTTCCA+TGG - Chr7:71410484-71410503 None:intergenic 30.0%
! CGATTCTTTTTACAGTGATT+TGG + Chr7:71408612-71408631 MsG0780039980.01.T01:intron 30.0%
! TTAGCTTTCTTAAACTCCTT+TGG - Chr7:71407003-71407022 None:intergenic 30.0%
! TTTAAACTTTCACTGGTTGT+TGG - Chr7:71408659-71408678 None:intergenic 30.0%
!! TGTTTATGTACTTTAGGATG+AGG + Chr7:71408085-71408104 MsG0780039980.01.T01:intron 30.0%
!!! GCTTTATTTTTATCTTGGAC+TGG + Chr7:71407870-71407889 MsG0780039980.01.T01:intron 30.0%
AAAGACATCAATACCAGTGT+TGG - Chr7:71410883-71410902 None:intergenic 35.0%
AAATGATAGAAGGTAAACGC+AGG + Chr7:71408887-71408906 MsG0780039980.01.T01:intron 35.0%
AATCACCAATTCACTACTGT+AGG - Chr7:71407850-71407869 None:intergenic 35.0%
AATGGAAATGATGAACTCAC+CGG - Chr7:71406881-71406900 None:intergenic 35.0%
AATTCACTACTGTAGGCAAT+CGG - Chr7:71407843-71407862 None:intergenic 35.0%
ACATGACCAGAATTGAATTC+TGG - Chr7:71409127-71409146 None:intergenic 35.0%
AGAATGATAAGCCCTTTCAA+GGG - Chr7:71409744-71409763 None:intergenic 35.0%
AGCATAATTTCAGAAGGACA+AGG - Chr7:71409205-71409224 None:intergenic 35.0%
AGTGTAAAAGAGATGGTTGA+AGG + Chr7:71408312-71408331 MsG0780039980.01.T01:intron 35.0%
AGTTATAATTGGGGCTAGAA+TGG - Chr7:71410157-71410176 None:intergenic 35.0%
AGTTTCCCAGAATTCAATTC+TGG + Chr7:71409118-71409137 MsG0780039980.01.T01:intron 35.0%
ATGAACAGAAAGAAAGGAGA+TGG - Chr7:71407054-71407073 None:intergenic 35.0%
CAAAGGTTGGAAGTTAATGT+TGG - Chr7:71408996-71409015 None:intergenic 35.0%
CAACATTAACTTCCAACCTT+TGG + Chr7:71408994-71409013 MsG0780039980.01.T01:intron 35.0%
CAAGCCAAAGATTAATGAAG+AGG + Chr7:71408510-71408529 MsG0780039980.01.T01:intron 35.0%
CACTTCAGCATAATTTCAGA+AGG - Chr7:71409211-71409230 None:intergenic 35.0%
CATGACCAGAATTGAATTCT+GGG - Chr7:71409126-71409145 None:intergenic 35.0%
CCCTATGAAATTTATCAGAC+AGG - Chr7:71409775-71409794 None:intergenic 35.0%
GAATGATACATAGCAAATGG+TGG - Chr7:71408166-71408185 None:intergenic 35.0%
GAGCCTTTCAAAAACGTTAT+AGG + Chr7:71409479-71409498 MsG0780039980.01.T01:CDS 35.0%
GCAAACAAGTGTAAAAGAGA+TGG + Chr7:71408305-71408324 MsG0780039980.01.T01:intron 35.0%
GCCTTGATTTAAACTTTCAC+TGG - Chr7:71408666-71408685 None:intergenic 35.0%
GCTGTGAATTTCAATTAGGT+TGG + Chr7:71407605-71407624 MsG0780039980.01.T01:intron 35.0%
GGAGTTTAAGAAAGCTAAGA+AGG + Chr7:71407005-71407024 MsG0780039980.01.T01:CDS 35.0%
GGGAATAAATAATGTGAGAG+AGG + Chr7:71408115-71408134 MsG0780039980.01.T01:CDS 35.0%
GTAATTTCTTCCCCTTGAAA+GGG + Chr7:71409730-71409749 MsG0780039980.01.T01:intron 35.0%
GTCTGATAAATTTCATAGGG+AGG + Chr7:71409775-71409794 MsG0780039980.01.T01:intron 35.0%
GTGTGTCAATGGAAATGTTT+AGG + Chr7:71408735-71408754 MsG0780039980.01.T01:intron 35.0%
TAGAATGATAAGCCCTTTCA+AGG - Chr7:71409745-71409764 None:intergenic 35.0%
TAGCTGTTGAAAGAATTGCT+TGG + Chr7:71407931-71407950 MsG0780039980.01.T01:intron 35.0%
TATGGCAGAAAAGAAGAAAG+AGG + Chr7:71407781-71407800 MsG0780039980.01.T01:CDS 35.0%
TGATGTGGAAACTCATCATT+AGG - Chr7:71407444-71407463 None:intergenic 35.0%
TGATTTCAGAGTGATGTTCA+TGG + Chr7:71407240-71407259 MsG0780039980.01.T01:CDS 35.0%
TGTCAAATGCTTGTTTGTGT+TGG + Chr7:71408376-71408395 MsG0780039980.01.T01:intron 35.0%
TTATAACAAAACCAGTGCTC+AGG + Chr7:71409654-71409673 MsG0780039980.01.T01:intron 35.0%
TTTCTTAAACTCCTTTGGAC+TGG - Chr7:71406998-71407017 None:intergenic 35.0%
TTTGCATCAGAGAGAATTGA+AGG - Chr7:71408290-71408309 None:intergenic 35.0%
! AGAATTGAATTCTGGGAAAC+TGG - Chr7:71409119-71409138 None:intergenic 35.0%
! CATGAAAGCAGGAAAGTATA+TGG + Chr7:71408811-71408830 MsG0780039980.01.T01:intron 35.0%
! GTTTGGAGAATGTTGATGAA+TGG - Chr7:71407084-71407103 None:intergenic 35.0%
! TTTTCTGCCATAGCAATGTA+AGG - Chr7:71407773-71407792 None:intergenic 35.0%
!! AAGCATTCTTTGAGACATGA+AGG - Chr7:71410659-71410678 None:intergenic 35.0%
!! AATTTTGACAAGTCAGAGTC+TGG + Chr7:71407961-71407980 MsG0780039980.01.T01:CDS 35.0%
!! AGCATTCTTTGAGACATGAA+GGG - Chr7:71410658-71410677 None:intergenic 35.0%
!! CGCTTCTTGTTGACTTAATA+GGG - Chr7:71409967-71409986 None:intergenic 35.0%
!! CTTTTTGTTCTTTGAGAGGA+AGG - Chr7:71410749-71410768 None:intergenic 35.0%
!! TCGCTTCTTGTTGACTTAAT+AGG - Chr7:71409968-71409987 None:intergenic 35.0%
!! TCTTGTTGACTTAATAGGGA+GGG - Chr7:71409963-71409982 None:intergenic 35.0%
!! TTCAATTAGGTTGGTAAAGC+TGG + Chr7:71407614-71407633 MsG0780039980.01.T01:intron 35.0%
!! TTCTTGTTGACTTAATAGGG+AGG - Chr7:71409964-71409983 None:intergenic 35.0%
!!! CACCTTTTTTATCTTCAGTC+CGG + Chr7:71410045-71410064 MsG0780039980.01.T01:intron 35.0%
!!! TGAGCACTGGTTTTGTTATA+AGG - Chr7:71409655-71409674 None:intergenic 35.0%
!!! TTGTTTTTAGCTGTGCCTTT+GGG + Chr7:71409932-71409951 MsG0780039980.01.T01:intron 35.0%
!!! TTTGTTTTTAGCTGTGCCTT+TGG + Chr7:71409931-71409950 MsG0780039980.01.T01:intron 35.0%
AAAGAAAGCAAGTCATCTGC+GGG - Chr7:71410384-71410403 None:intergenic 40.0%
AACAGATAACCTACTTCACC+AGG + Chr7:71410320-71410339 MsG0780039980.01.T01:CDS 40.0%
AAGAAATTACCAGCACCGTT+CGG - Chr7:71409720-71409739 None:intergenic 40.0%
AAGCTAAGAAGGATCCTTTC+AGG + Chr7:71407016-71407035 MsG0780039980.01.T01:CDS 40.0%
AATTTCAGAAGGACAAGGAG+TGG - Chr7:71409200-71409219 None:intergenic 40.0%
ACAAGACACATTTCTGTCAC+CGG - Chr7:71410067-71410086 None:intergenic 40.0%
ACAGAAAGAAAGGAGATGGA+TGG - Chr7:71407050-71407069 None:intergenic 40.0%
ACCTTATTAGTCCTTGATGC+AGG - Chr7:71410090-71410109 None:intergenic 40.0%
AGAGATGGTTGAAGGATACA+TGG + Chr7:71408320-71408339 MsG0780039980.01.T01:intron 40.0%
AGCAAGAGACAATTAAGGTC+AGG + Chr7:71410793-71410812 MsG0780039980.01.T01:CDS 40.0%
AGGTCAATTGCTTCTTGAGT+TGG - Chr7:71410836-71410855 None:intergenic 40.0%
AGGTGTTCATATGGTTGTGT+TGG + Chr7:71408044-71408063 MsG0780039980.01.T01:intron 40.0%
ATAGTCACAAAGGATCGTTG+TGG - Chr7:71409517-71409536 None:intergenic 40.0%
ATCAGACTGCGAAAACTCTA+AGG + Chr7:71410958-71410977 MsG0780039980.01.T01:CDS 40.0%
ATCCGCAATATGCTCAACTT+GGG - Chr7:71409455-71409474 None:intergenic 40.0%
ATCCTCAAACTGACCAGAAA+AGG - Chr7:71409804-71409823 None:intergenic 40.0%
ATTATGCTGAAGTGTGTGCT+TGG + Chr7:71409217-71409236 MsG0780039980.01.T01:CDS 40.0%
ATTGGGTAATCACCAACAAC+AGG - Chr7:71411037-71411056 None:intergenic 40.0%
ATTTCTTTCTCTTCCAGGTG+AGG + Chr7:71410208-71410227 MsG0780039980.01.T01:intron 40.0%
CAAAGAAAGCAAGTCATCTG+CGG - Chr7:71410385-71410404 None:intergenic 40.0%
CACCGGACTGAAGATAAAAA+AGG - Chr7:71410050-71410069 None:intergenic 40.0%
CACCTGGAAGAGAAAGAAAT+TGG - Chr7:71410208-71410227 None:intergenic 40.0%
CCATTTAGTGGAATAAGGCT+TGG - Chr7:71407375-71407394 None:intergenic 40.0%
CCTCATCTGATTGAATGCAA+AGG - Chr7:71410550-71410569 None:intergenic 40.0%
CCTTTGCATTCAATCAGATG+AGG + Chr7:71410547-71410566 MsG0780039980.01.T01:CDS 40.0%
CTAGAATGGTACACCTTAGA+GGG - Chr7:71410143-71410162 None:intergenic 40.0%
CTTAACATGTATGACTGGGT+TGG + Chr7:71408451-71408470 MsG0780039980.01.T01:intron 40.0%
GAATGATAAGCCCTTTCAAG+GGG - Chr7:71409743-71409762 None:intergenic 40.0%
GATTGCCTACAGTAGTGAAT+TGG + Chr7:71407842-71407861 MsG0780039980.01.T01:intron 40.0%
GCAAGAGACAATTAAGGTCA+GGG + Chr7:71410794-71410813 MsG0780039980.01.T01:CDS 40.0%
GGACATTGTGCGATAAGAAA+TGG + Chr7:71408472-71408491 MsG0780039980.01.T01:intron 40.0%
GGTAATTTCTTCCCCTTGAA+AGG + Chr7:71409729-71409748 MsG0780039980.01.T01:intron 40.0%
GGTCAGAACCTTACTATTGT+AGG - Chr7:71407822-71407841 None:intergenic 40.0%
TAAGAAATGGTGCGTTGCAT+TGG + Chr7:71408485-71408504 MsG0780039980.01.T01:intron 40.0%
TAGTCACAAAGGATCGTTGT+GGG - Chr7:71409516-71409535 None:intergenic 40.0%
TATAAGTCGACGCCATTTAG+TGG - Chr7:71407387-71407406 None:intergenic 40.0%
TATCCGCAATATGCTCAACT+TGG - Chr7:71409456-71409475 None:intergenic 40.0%
TCAGTATCAGCTGGATCAAT+GGG - Chr7:71409055-71409074 None:intergenic 40.0%
TCATCGACACCAATAACGAT+TGG + Chr7:71409266-71409285 MsG0780039980.01.T01:CDS 40.0%
TCCTGCATCAAGGACTAATA+AGG + Chr7:71410086-71410105 MsG0780039980.01.T01:CDS 40.0%
TCTCTTCGACTATTGACCTT+TGG + Chr7:71409295-71409314 MsG0780039980.01.T01:CDS 40.0%
TGCCAATTTCTTTCTCTTCC+AGG + Chr7:71410203-71410222 MsG0780039980.01.T01:intron 40.0%
TGCTGAAAAGGGACTCAAAA+TGG + Chr7:71408925-71408944 MsG0780039980.01.T01:intron 40.0%
TGGTGAAGTAGGTTATCTGT+TGG - Chr7:71410321-71410340 None:intergenic 40.0%
TTATGCTGAAGTGTGTGCTT+GGG + Chr7:71409218-71409237 MsG0780039980.01.T01:CDS 40.0%
TTGCATTCAATCAGATGAGG+AGG + Chr7:71410550-71410569 MsG0780039980.01.T01:CDS 40.0%
TTTCCATTGACACACTCACA+TGG - Chr7:71408730-71408749 None:intergenic 40.0%
! AACCCAAGTTGAGCATATTG+CGG + Chr7:71409450-71409469 MsG0780039980.01.T01:CDS 40.0%
! ACAAATGGTTGGTACTTCCA+AGG + Chr7:71410113-71410132 MsG0780039980.01.T01:CDS 40.0%
! ACTTTCACTGGTTGTTGGTT+TGG - Chr7:71408654-71408673 None:intergenic 40.0%
! ATGATGAACTCACCGGTTAT+TGG - Chr7:71406874-71406893 None:intergenic 40.0%
! ATGGGTTTGGTAAACCAAGA+AGG - Chr7:71409037-71409056 None:intergenic 40.0%
! CGATTTCTTTTGTCTGCCAA+TGG - Chr7:71409999-71410018 None:intergenic 40.0%
! CTTTCTAGCAAGTTGGATGT+TGG + Chr7:71409824-71409843 MsG0780039980.01.T01:intron 40.0%
! GATTGATTCTAGTGTAGCCA+TGG + Chr7:71410464-71410483 MsG0780039980.01.T01:CDS 40.0%
! TAGGTTTGAAACCAGTCCAA+AGG + Chr7:71406984-71407003 MsG0780039980.01.T01:intron 40.0%
! TGAGAGAGGAGTGAAAGTAT+GGG + Chr7:71408129-71408148 MsG0780039980.01.T01:intron 40.0%
! TGAGGATCTTTCTAGCAAGT+TGG + Chr7:71409817-71409836 MsG0780039980.01.T01:intron 40.0%
! TTTTGACAGTCAGTATCAGC+TGG - Chr7:71409064-71409083 None:intergenic 40.0%
!! AATTAGGTTGGTAAAGCTGG+CGG + Chr7:71407617-71407636 MsG0780039980.01.T01:intron 40.0%
!! ACTTTAGGATGAGGATGATG+AGG + Chr7:71408094-71408113 MsG0780039980.01.T01:intron 40.0%
!! CAGTGATTTGGTTAACTGTC+AGG + Chr7:71408624-71408643 MsG0780039980.01.T01:intron 40.0%
!! CCAAGCCTTATTCCACTAAA+TGG + Chr7:71407372-71407391 MsG0780039980.01.T01:intron 40.0%
!! CTTGTTGACTTAATAGGGAG+GGG - Chr7:71409962-71409981 None:intergenic 40.0%
!! CTTTAGGATGAGGATGATGA+GGG + Chr7:71408095-71408114 MsG0780039980.01.T01:intron 40.0%
!! TACCTTTTCTGGTCAGTTTG+AGG + Chr7:71409799-71409818 MsG0780039980.01.T01:intron 40.0%
!! TGATCTGCTCAAGAGTACTT+TGG - Chr7:71410623-71410642 None:intergenic 40.0%
!! TTCTAGAATGCGTATGCACT+AGG + Chr7:71409594-71409613 MsG0780039980.01.T01:intron 40.0%
AAGAAAGCAAGTCATCTGCG+GGG - Chr7:71410383-71410402 None:intergenic 45.0%
AATCAGATGAGGAGGCTAGT+TGG + Chr7:71410558-71410577 MsG0780039980.01.T01:CDS 45.0%
ACACACTCACATGGTAGCAT+AGG - Chr7:71408721-71408740 None:intergenic 45.0%
ACAGCGACGGATGTATTGAA+TGG - Chr7:71407274-71407293 None:intergenic 45.0%
ACGCAAAACCCTCCAATAAC+CGG + Chr7:71406859-71406878 MsG0780039980.01.T01:CDS 45.0%
AGAACTTGAGGACCTGTTGT+TGG + Chr7:71411022-71411041 MsG0780039980.01.T01:CDS 45.0%
AGGTTATCTGTTGGACCCAA+AGG - Chr7:71410312-71410331 None:intergenic 45.0%
ATGTGTCTTGTCCTGCATCA+AGG + Chr7:71410076-71410095 MsG0780039980.01.T01:CDS 45.0%
CAAGCGGTGAATTCCAAAGA+CGG + Chr7:71410708-71410727 MsG0780039980.01.T01:CDS 45.0%
CAAGGCTCCTTACATTGCTA+TGG + Chr7:71407763-71407782 MsG0780039980.01.T01:CDS 45.0%
CCTTCCTGTTTACAAGCAAG+CGG + Chr7:71410692-71410711 MsG0780039980.01.T01:CDS 45.0%
CGACGCCATTTAGTGGAATA+AGG - Chr7:71407380-71407399 None:intergenic 45.0%
CGCTTGCTTGTAAACAGGAA+GGG - Chr7:71410694-71410713 None:intergenic 45.0%
CGTTGTTGCCTGAAATCCAA+GGG + Chr7:71410274-71410293 MsG0780039980.01.T01:CDS 45.0%
CTACCATGTGAGTGTGTCAA+TGG + Chr7:71408724-71408743 MsG0780039980.01.T01:intron 45.0%
GAAGCAATTGACCTTAGCTG+AGG + Chr7:71410842-71410861 MsG0780039980.01.T01:CDS 45.0%
GAATTAGCTGAAGCCAACAC+TGG + Chr7:71410867-71410886 MsG0780039980.01.T01:CDS 45.0%
GACAAAACTCACAACAGCGA+CGG - Chr7:71407287-71407306 None:intergenic 45.0%
GATAGAAGGTAAACGCAGGA+TGG + Chr7:71408891-71408910 MsG0780039980.01.T01:intron 45.0%
GCTAGAATGGTACACCTTAG+AGG - Chr7:71410144-71410163 None:intergenic 45.0%
GCTGCATGCCTACAATAGTA+AGG + Chr7:71407811-71407830 MsG0780039980.01.T01:CDS 45.0%
GTAAAGCTGGCGGTCAAAAA+TGG + Chr7:71407627-71407646 MsG0780039980.01.T01:CDS 45.0%
GTCAGTATCAGCTGGATCAA+TGG - Chr7:71409056-71409075 None:intergenic 45.0%
GTGAGAGAGGAGTGAAAGTA+TGG + Chr7:71408128-71408147 MsG0780039980.01.T01:intron 45.0%
GTTGTTGCCTGAAATCCAAG+GGG + Chr7:71410275-71410294 MsG0780039980.01.T01:CDS 45.0%
TATGCTGAAGTGTGTGCTTG+GGG + Chr7:71409219-71409238 MsG0780039980.01.T01:CDS 45.0%
TCGTTGTTGCCTGAAATCCA+AGG + Chr7:71410273-71410292 MsG0780039980.01.T01:CDS 45.0%
TGTCGACAGAGGAAGTTGAA+GGG - Chr7:71410248-71410267 None:intergenic 45.0%
TTCACCGCTTGCTTGTAAAC+AGG - Chr7:71410699-71410718 None:intergenic 45.0%
TTGGCAGTCAGTCACCATTA+CGG - Chr7:71410189-71410208 None:intergenic 45.0%
TTGTCGACAGAGGAAGTTGA+AGG - Chr7:71410249-71410268 None:intergenic 45.0%
! ACCATCTCTTTTGCCCTTGT+TGG + Chr7:71408187-71408206 MsG0780039980.01.T01:intron 45.0%
! AGAGAGGAGTGAAAGTATGG+GGG + Chr7:71408131-71408150 MsG0780039980.01.T01:intron 45.0%
! ATCAGCTGGATCAATGGGTT+TGG - Chr7:71409050-71409069 None:intergenic 45.0%
! ATGAACTCACCGGTTATTGG+AGG - Chr7:71406871-71406890 None:intergenic 45.0%
! ATGGTTGGTACTTCCAAGGT+TGG + Chr7:71410117-71410136 MsG0780039980.01.T01:intron 45.0%
! GAGAGAGGAGTGAAAGTATG+GGG + Chr7:71408130-71408149 MsG0780039980.01.T01:intron 45.0%
! GCATAGGGTTTTCTGCTTGT+TGG + Chr7:71409335-71409354 MsG0780039980.01.T01:CDS 45.0%
! GTTATTGGAGGGTTTTGCGT+CGG - Chr7:71406859-71406878 None:intergenic 45.0%
! GTTTTATGCCCCCAACCATT+TGG + Chr7:71409363-71409382 MsG0780039980.01.T01:CDS 45.0%
! TGAACTCACCGGTTATTGGA+GGG - Chr7:71406870-71406889 None:intergenic 45.0%
!! AGAGGCAGTTGTTGCTTTAG+AGG - Chr7:71410594-71410613 None:intergenic 45.0%
!! AGAGTACTTTGGCTTGAGAG+AGG - Chr7:71410612-71410631 None:intergenic 45.0%
!!! TGGTTTGACCGACTGGTTTT+TGG + Chr7:71409690-71409709 MsG0780039980.01.T01:intron 45.0%
AACAGCCGGCCAAATCCAAA+TGG - Chr7:71409381-71409400 None:intergenic 50.0%
AAGGAGGCAATTTCCTCACC+TGG - Chr7:71410224-71410243 None:intergenic 50.0%
ACAGAGGAAGTTGAAGGGGA+AGG - Chr7:71410243-71410262 None:intergenic 50.0%
AGAAGCGACAGTACTGCCAT+TGG + Chr7:71409980-71409999 MsG0780039980.01.T01:intron 50.0%
AGAAGCTGCAGGACTTGAGT+CGG - Chr7:71410412-71410431 None:intergenic 50.0%
AGCACACATGAGGCTTGCAT+AGG + Chr7:71409319-71409338 MsG0780039980.01.T01:CDS 50.0%
AGCTAATTCCGCCTCAGCTA+AGG - Chr7:71410856-71410875 None:intergenic 50.0%
AGTGCCTGTGCTCGACAAAT+GGG + Chr7:71409163-71409182 MsG0780039980.01.T01:CDS 50.0%
ATTTGTCGAGCACAGGCACT+AGG - Chr7:71409163-71409182 None:intergenic 50.0%
CAACGAAGACTTGTCGACAG+AGG - Chr7:71410259-71410278 None:intergenic 50.0%
CAATACGCTCTTGCTGAACC+TGG - Chr7:71410341-71410360 None:intergenic 50.0%
CCCAACCATTTGGATTTGGC+CGG + Chr7:71409373-71409392 MsG0780039980.01.T01:CDS 50.0%
CCGCTTGCTTGTAAACAGGA+AGG - Chr7:71410695-71410714 None:intergenic 50.0%
CCGGCCAAATCCAAATGGTT+GGG - Chr7:71409376-71409395 None:intergenic 50.0%
CGGCCAAATCCAAATGGTTG+GGG - Chr7:71409375-71409394 None:intergenic 50.0%
CTGATTCACCTCGTCACGAA+GGG - Chr7:71410943-71410962 None:intergenic 50.0%
CTTCTTCACCAAGCCGTCTT+TGG - Chr7:71410724-71410743 None:intergenic 50.0%
CTTGCTGAACCTGGTGAAGT+AGG - Chr7:71410332-71410351 None:intergenic 50.0%
GCAATTGACCTTAGCTGAGG+CGG + Chr7:71410845-71410864 MsG0780039980.01.T01:CDS 50.0%
GCACACATGAGGCTTGCATA+GGG + Chr7:71409320-71409339 MsG0780039980.01.T01:CDS 50.0%
GCCAACAAGGGCAAAAGAGA+TGG - Chr7:71408191-71408210 None:intergenic 50.0%
GGCCAAATCCAAATGGTTGG+GGG - Chr7:71409374-71409393 None:intergenic 50.0%
GGTGAATTCCAAAGACGGCT+TGG + Chr7:71410713-71410732 MsG0780039980.01.T01:CDS 50.0%
GTCGACAGAGGAAGTTGAAG+GGG - Chr7:71410247-71410266 None:intergenic 50.0%
TAGTGCCTGTGCTCGACAAA+TGG + Chr7:71409162-71409181 MsG0780039980.01.T01:CDS 50.0%
TCAGCAGAAGCAACGTCCAA+AGG - Chr7:71410525-71410544 None:intergenic 50.0%
TCGGTCGACCAAAAACCAGT+CGG - Chr7:71409701-71409720 None:intergenic 50.0%
TCTGATTCACCTCGTCACGA+AGG - Chr7:71410944-71410963 None:intergenic 50.0%
TGAACCCATTTGTCGAGCAC+AGG - Chr7:71409170-71409189 None:intergenic 50.0%
TGCCCCCAACCATTTGGATT+TGG + Chr7:71409369-71409388 MsG0780039980.01.T01:CDS 50.0%
TGGCAGTCAGTCACCATTAC+GGG - Chr7:71410188-71410207 None:intergenic 50.0%
TTTGGATTTGGCCGGCTGTT+TGG + Chr7:71409381-71409400 MsG0780039980.01.T01:CDS 50.0%
TTTGTCGAGCACAGGCACTA+GGG - Chr7:71409162-71409181 None:intergenic 50.0%
! AGAGTCTGGAGTCAACGATG+AGG + Chr7:71407975-71407994 MsG0780039980.01.T01:CDS 50.0%
! CAGGTTCAGCAAGAGCGTAT+TGG + Chr7:71410339-71410358 MsG0780039980.01.T01:CDS 50.0%
! CATAGGGAGGCTACCTTTTC+TGG + Chr7:71409788-71409807 MsG0780039980.01.T01:intron 50.0%
! GAGACTAGTGTCGAAGCCTT+TGG + Chr7:71410506-71410525 MsG0780039980.01.T01:CDS 50.0%
! GCTCAGGTTGTGTGCATCTT+TGG + Chr7:71409670-71409689 MsG0780039980.01.T01:intron 50.0%
!! CAGCTTCTGCGTTTTCTGGT+CGG + Chr7:71410424-71410443 MsG0780039980.01.T01:CDS 50.0%
!! GCATCTTTGGTTTGACCGAC+TGG + Chr7:71409683-71409702 MsG0780039980.01.T01:intron 50.0%
!! GGATGGCTCTGAAACCTGAA+AGG - Chr7:71407033-71407052 None:intergenic 50.0%
!!! CTGGTTTTTGGTCGACCGAA+CGG + Chr7:71409702-71409721 MsG0780039980.01.T01:intron 50.0%
ACACCTTAGAGGGCCAACCT+TGG - Chr7:71410133-71410152 None:intergenic 55.0%
AGAATCAATCCCAGCAGCCG+CGG - Chr7:71410454-71410473 None:intergenic 55.0%
AGCCTCATGTGTGCTGCCAA+AGG - Chr7:71409314-71409333 None:intergenic 55.0%
ATAGGGAGGGGTTGACCCAA+AGG - Chr7:71409950-71409969 None:intergenic 55.0%
ATTTGGCCGGCTGTTTGGTC+AGG + Chr7:71409386-71409405 MsG0780039980.01.T01:CDS 55.0%
CATCAATGCCCTTCGTGACG+AGG + Chr7:71410932-71410951 MsG0780039980.01.T01:CDS 55.0%
CCAGAAAACGCAGAAGCTGC+AGG - Chr7:71410423-71410442 None:intergenic 55.0%
GAAGTGTGTGCTTGGGGTTG+AGG + Chr7:71409225-71409244 MsG0780039980.01.T01:CDS 55.0%
GACCTTTGGCAGCACACATG+AGG + Chr7:71409309-71409328 MsG0780039980.01.T01:CDS 55.0%
GACTGGACCCCTTGGATTTC+AGG - Chr7:71410285-71410304 None:intergenic 55.0%
GAGAACGAGCGACCAAAGGT+TGG - Chr7:71409009-71409028 None:intergenic 55.0%
GAGGAAGTTGAAGGGGAAGG+AGG - Chr7:71410240-71410259 None:intergenic 55.0%
GATGCACACAACCTGAGCAC+TGG - Chr7:71409668-71409687 None:intergenic 55.0%
GCCGGCCAAATCCAAATGGT+TGG - Chr7:71409377-71409396 None:intergenic 55.0%
TTGGACCCAAAGGCTTCGAC+TGG - Chr7:71410302-71410321 None:intergenic 55.0%
TTTGGCCGGCTGTTTGGTCA+GGG + Chr7:71409387-71409406 MsG0780039980.01.T01:CDS 55.0%
! ATTGGAGGGTTTTGCGTCGG+CGG - Chr7:71406856-71406875 None:intergenic 55.0%
! CCTGCAGCTTCTGCGTTTTC+TGG + Chr7:71410420-71410439 MsG0780039980.01.T01:CDS 55.0%
! CTTCCAAGGTTGGCCCTCTA+AGG + Chr7:71410127-71410146 MsG0780039980.01.T01:intron 55.0%
! GTCTGGAGTCAACGATGAGG+AGG + Chr7:71407978-71407997 MsG0780039980.01.T01:CDS 55.0%
!! TTTGCGTCGGCGGTGGTTTT+AGG - Chr7:71406846-71406865 None:intergenic 55.0%
AAGGCTTCGACTGGACCCCT+TGG - Chr7:71410293-71410312 None:intergenic 60.0%
AGGGGTCCAGTCGAAGCCTT+TGG + Chr7:71410293-71410312 MsG0780039980.01.T01:CDS 60.0%
CCTTTGGTCGCTCGTTCTCG+CGG + Chr7:71409010-71409029 MsG0780039980.01.T01:intron 60.0%
CTCGTTCTCGCGGTCCTTCT+TGG + Chr7:71409020-71409039 MsG0780039980.01.T01:intron 60.0%
GGGGTCCAGTCGAAGCCTTT+GGG + Chr7:71410294-71410313 MsG0780039980.01.T01:CDS 60.0%
GTCAGCCCTGACCAAACAGC+CGG - Chr7:71409395-71409414 None:intergenic 60.0%
TGTGCTTGGGGTTGAGGCGA+AGG + Chr7:71409231-71409250 MsG0780039980.01.T01:CDS 60.0%
TTTGGTCGACCGAACGGTGC+TGG + Chr7:71409708-71409727 MsG0780039980.01.T01:intron 60.0%
!! GTTTTCTGGTCGGTCCTCCG+CGG + Chr7:71410434-71410453 MsG0780039980.01.T01:CDS 60.0%
ATCAATCCCAGCAGCCGCGG+AGG - Chr7:71410451-71410470 None:intergenic 65.0%
CCGCGAGAACGAGCGACCAA+AGG - Chr7:71409013-71409032 None:intergenic 65.0%
GTCGAGCACAGGCACTAGGG+AGG - Chr7:71409159-71409178 None:intergenic 65.0%
!! GGAGGGTTTTGCGTCGGCGG+TGG - Chr7:71406853-71406872 None:intergenic 70.0%
GTCGGTCCTCCGCGGCTGCT+GGG + Chr7:71410442-71410461 MsG0780039980.01.T01:CDS 75.0%
! GGTCGGTCCTCCGCGGCTGC+TGG + Chr7:71410441-71410460 MsG0780039980.01.T01:CDS 80.0%
Chromosome Type Strat End Strand Name
Chr7 gene 71406840 71411070 71406840 ID=MsG0780039980.01;Name=MsG0780039980.01
Chr7 mRNA 71406840 71411070 71406840 ID=MsG0780039980.01.T01;Parent=MsG0780039980.01;Name=MsG0780039980.01.T01;_AED=0.52;_eAED=0.69;_QI=0|0|0|0.7|0.88|0.9|10|0|595
Chr7 exon 71406840 71406880 71406840 ID=MsG0780039980.01.T01:exon:13787;Parent=MsG0780039980.01.T01
Chr7 exon 71406987 71407073 71406987 ID=MsG0780039980.01.T01:exon:13788;Parent=MsG0780039980.01.T01
Chr7 exon 71407237 71407294 71407237 ID=MsG0780039980.01.T01:exon:13789;Parent=MsG0780039980.01.T01
Chr7 exon 71407623 71407667 71407623 ID=MsG0780039980.01.T01:exon:13790;Parent=MsG0780039980.01.T01
Chr7 exon 71407761 71407832 71407761 ID=MsG0780039980.01.T01:exon:13791;Parent=MsG0780039980.01.T01
Chr7 exon 71407934 71408008 71407934 ID=MsG0780039980.01.T01:exon:13792;Parent=MsG0780039980.01.T01
Chr7 exon 71408101 71408138 71408101 ID=MsG0780039980.01.T01:exon:13793;Parent=MsG0780039980.01.T01
Chr7 exon 71409120 71409573 71409120 ID=MsG0780039980.01.T01:exon:13794;Parent=MsG0780039980.01.T01
Chr7 exon 71410063 71410134 71410063 ID=MsG0780039980.01.T01:exon:13795;Parent=MsG0780039980.01.T01
Chr7 exon 71410225 71411070 71410225 ID=MsG0780039980.01.T01:exon:13796;Parent=MsG0780039980.01.T01
Chr7 CDS 71406840 71406880 71406840 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Chr7 CDS 71406987 71407073 71406987 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Chr7 CDS 71407237 71407294 71407237 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Chr7 CDS 71407623 71407667 71407623 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Chr7 CDS 71407761 71407832 71407761 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Chr7 CDS 71407934 71408008 71407934 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Chr7 CDS 71408101 71408138 71408101 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Chr7 CDS 71409120 71409573 71409120 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Chr7 CDS 71410063 71410134 71410063 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Chr7 CDS 71410225 71411070 71410225 ID=MsG0780039980.01.T01:cds;Parent=MsG0780039980.01.T01
Gene Sequence

>MsG0780039980.01.T01

ATGCCTAAAACCACCGCCGACGCAAAACCCTCCAATAACCGGTTTGAAACCAGTCCAAAGGAGTTTAAGAAAGCTAAGAAGGATCCTTTCAGGTTTCAGAGCCATCCATCTCCTTTCTTTCTGTTCATGTCTGATTTCAGAGTGATGTTCATGGCGAAAAATCCATTCAATACATCCGTCGCTGTTGTTGGTAAAGCTGGCGGTCAAAAATGGAAATCGATGTCGAATGCTGACAAGGCTCCTTACATTGCTATGGCAGAAAAGAAGAAAGAGGAATATGAGCTGCATGCCTACAATAGTAAGCTGTTGAAAGAATTGCTTGGTGAAAGAAATTTTGACAAGTCAGAGTCTGGAGTCAACGATGAGGAGGAAGATGATGATGAGGATGATGAGGGAATAAATAATGTGAGAGAGGATTTCCCAGAATTCAATTCTGGTCATGTGTCTGCTTTCCTCCCTAGTGCCTGTGCTCGACAAATGGGTTCATGTCAAGCCACTCCTTGTCCTTCTGAAATTATGCTGAAGTGTGTGCTTGGGGTTGAGGCGAAGGAATTCGACAAGATCATCGACACCAATAACGATTGGTTGAAATCTCTTCGACTATTGACCTTTGGCAGCACACATGAGGCTTGCATAGGGTTTTCTGCTTGTTGGAAGAAGTTTTATGCCCCCAACCATTTGGATTTGGCCGGCTGTTTGGTCAGGGCTGACACATCTCTTACGCAGCTTGCAGTGTCTTCAAGCGAAACCCAAGTTGAGCATATTGCGGATATACGAGCCTTTCAAAAACGTTATAGGCTTAAATGGTACCCACAACGATCCTTTGTGACTATTAAAACTGTTAATGAAGTCTTGGCTATACTTAAAAAGTCCGGTGACAGAAATGTGTCTTGTCCTGCATCAAGGACTAATAAGGTAACACAAATGGTTGGTACTTCCAAGGTGAGGAAATTGCCTCCTTCCCCTTCAACTTCCTCTGTCGACAAGTCTTCGTTGTTGCCTGAAATCCAAGGGGTCCAGTCGAAGCCTTTGGGTCCAACAGATAACCTACTTCACCAGGTTCAGCAAGAGCGTATTGGCGACACTGACAATGCTGACCCCGCAGATGACTTGCTTTCTTTGCTGACCGACTCAAGTCCTGCAGCTTCTGCGTTTTCTGGTCGGTCCTCCGCGGCTGCTGGGATTGATTCTAGTGTAGCCATGGAACTTTTTAAAGAACTGAAGAGACTAGTGTCGAAGCCTTTGGACGTTGCTTCTGCTGACACCTTTGCATTCAATCAGATGAGGAGGCTAGTTGGAGAACTCAAGCCTCTAAAGCAACAACTGCCTCTCTCAAGCCAAAGTACTCTTGAGCAGATCAACAATTTTCTATCCCTTCATGTCTCAAAGAATGCTTTCTTAACAGCTACCCTTCCTGTTTACAAGCAAGCGGTGAATTCCAAAGACGGCTTGGTGAAGAAGCTCCTTCCTCTCAAAGAACAAAAAGAAAAGATTGCAGTAAACAAAAAACAGCAAGAGACAATTAAGGTCAGGGCTGAAGAGAAAGTTGACCAACTCAAGAAGCAATTGACCTTAGCTGAGGCGGAATTAGCTGAAGCCAACACTGGTATTGATGTCTTTATCAATTTGGAGAAGAAGCGTGTCGACAGCATCAATGCCCTTCGTGACGAGGTGAATCAGACTGCGAAAACTCTAAGGAATCTTCAGTCTGACTATGAGTTAGCAGTATCAACTAAGAAAGAACTTGAGGACCTGTTGTTGGTGATTACCCAATCCAGTTCCCCTTGA
Protein sequence

>MsG0780039980.01.T01

MPKTTADAKPSNNRFETSPKEFKKAKKDPFRFQSHPSPFFLFMSDFRVMFMAKNPFNTSVAVVGKAGGQKWKSMSNADKAPYIAMAEKKKEEYELHAYNSKLLKELLGERNFDKSESGVNDEEEDDDEDDEGINNVREDFPEFNSGHVSAFLPSACARQMGSCQATPCPSEIMLKCVLGVEAKEFDKIIDTNNDWLKSLRLLTFGSTHEACIGFSACWKKFYAPNHLDLAGCLVRADTSLTQLAVSSSETQVEHIADIRAFQKRYRLKWYPQRSFVTIKTVNEVLAILKKSGDRNVSCPASRTNKVTQMVGTSKVRKLPPSPSTSSVDKSSLLPEIQGVQSKPLGPTDNLLHQVQQERIGDTDNADPADDLLSLLTDSSPAASAFSGRSSAAAGIDSSVAMELFKELKRLVSKPLDVASADTFAFNQMRRLVGELKPLKQQLPLSSQSTLEQINNFLSLHVSKNAFLTATLPVYKQAVNSKDGLVKKLLPLKEQKEKIAVNKKQQETIKVRAEEKVDQLKKQLTLAEAELAEANTGIDVFINLEKKRVDSINALRDEVNQTAKTLRNLQSDYELAVSTKKELEDLLLVITQSSSP*