AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040754.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040754.01.T01 MTR_7g097090 98.625 291 4 0 1 291 1 291 0.0 602
MsG0780040754.01.T01 MTR_1g069805 76.792 293 48 8 1 291 1 275 4.67e-158 441
MsG0780040754.01.T01 MTR_2g064470 62.893 159 50 3 6 159 7 161 2.49e-69 217
MsG0780040754.01.T01 MTR_3g109340 43.426 251 124 5 9 246 21 266 8.70e-63 202
MsG0780040754.01.T01 MTR_3g109340 43.254 252 124 5 9 246 21 267 2.35e-62 201
MsG0780040754.01.T01 MTR_2g078700 56.250 160 64 1 8 161 21 180 1.86e-59 194
MsG0780040754.01.T01 MTR_1g008740 46.829 205 100 3 2 197 5 209 1.08e-58 191
MsG0780040754.01.T01 MTR_1g008740 46.829 205 100 3 2 197 19 223 1.23e-58 191
MsG0780040754.01.T01 MTR_4g108760 55.844 154 60 3 10 157 17 168 4.09e-57 187
MsG0780040754.01.T01 MTR_3g116070 39.016 305 139 9 10 279 23 315 1.49e-56 186
MsG0780040754.01.T01 MTR_6g084430 56.000 150 62 2 10 157 5 152 8.21e-56 183
MsG0780040754.01.T01 MTR_6g012670 47.236 199 81 5 10 196 20 206 9.75e-56 183
MsG0780040754.01.T01 MTR_5g021710 55.195 154 62 4 8 156 6 157 1.70e-55 183
MsG0780040754.01.T01 MTR_7g085260 42.593 270 113 9 10 240 17 283 1.99e-55 184
MsG0780040754.01.T01 MTR_3g435150 46.890 209 99 6 10 211 16 219 2.31e-55 181
MsG0780040754.01.T01 MTR_4g036030 43.379 219 110 5 8 216 5 219 1.69e-54 180
MsG0780040754.01.T01 MTR_3g070030 42.149 242 119 8 10 237 19 253 2.25e-54 180
MsG0780040754.01.T01 MTR_6g032770 53.503 157 67 2 10 160 18 174 4.49e-54 180
MsG0780040754.01.T01 MTR_4g101680 41.597 238 109 8 8 231 5 226 1.24e-53 179
MsG0780040754.01.T01 MTR_4g035590 48.649 185 77 4 8 176 6 188 2.51e-53 177
MsG0780040754.01.T01 MTR_8g076110 49.143 175 79 5 8 174 4 176 3.60e-53 176
MsG0780040754.01.T01 MTR_1g096430 42.373 236 121 6 5 228 2 234 5.05e-53 176
MsG0780040754.01.T01 MTR_5g012080 52.564 156 65 4 8 156 5 158 7.72e-53 176
MsG0780040754.01.T01 MTR_2g064090 50.588 170 75 3 9 171 5 172 2.15e-52 175
MsG0780040754.01.T01 MTR_6g477900 52.903 155 65 3 8 156 4 156 1.22e-51 170
MsG0780040754.01.T01 MTR_2g080010 50.307 163 66 2 10 157 15 177 2.02e-51 172
MsG0780040754.01.T01 MTR_7g085220 48.780 164 69 3 10 158 8 171 3.14e-51 172
MsG0780040754.01.T01 MTR_4g089135 46.369 179 69 2 10 161 15 193 5.98e-51 171
MsG0780040754.01.T01 MTR_3g064580 54.777 157 62 3 8 157 4 158 4.06e-50 176
MsG0780040754.01.T01 MTR_4g081870 44.886 176 86 4 8 175 7 179 5.07e-50 166
MsG0780040754.01.T01 MTR_8g094580 46.667 180 84 3 10 181 7 182 2.55e-49 165
MsG0780040754.01.T01 MTR_7g011130 38.372 258 122 7 13 237 22 275 3.56e-49 167
MsG0780040754.01.T01 MTR_2g062730 51.634 153 68 4 9 156 9 160 6.52e-49 166
MsG0780040754.01.T01 MTR_5g076850 55.769 156 61 4 8 157 4 157 7.30e-49 172
MsG0780040754.01.T01 MTR_3g096920 48.824 170 74 4 10 170 7 172 1.29e-48 164
MsG0780040754.01.T01 MTR_3g088110 49.091 165 74 2 10 167 7 168 1.37e-48 163
MsG0780040754.01.T01 MTR_7g005280 50.000 156 73 2 10 163 15 167 1.53e-48 162
MsG0780040754.01.T01 MTR_7g100990 35.739 291 137 7 10 276 11 275 2.93e-48 164
MsG0780040754.01.T01 MTR_2157s0010 47.531 162 71 3 10 157 8 169 3.64e-48 161
MsG0780040754.01.T01 MTR_5g014300 49.123 171 79 4 7 169 3 173 5.75e-48 163
MsG0780040754.01.T01 MTR_5g041940 46.452 155 73 2 10 156 3 155 6.53e-48 160
MsG0780040754.01.T01 MTR_2g093810 43.000 200 101 3 9 195 13 212 1.37e-47 162
MsG0780040754.01.T01 MTR_8g024480 34.050 279 152 6 8 263 13 282 1.57e-46 162
MsG0780040754.01.T01 MTR_2g079990 48.171 164 75 3 1 156 3 164 3.86e-46 159
MsG0780040754.01.T01 MTR_7g011120 45.614 171 76 3 13 170 11 177 2.63e-45 155
MsG0780040754.01.T01 MTR_8g059170 48.701 154 71 2 9 156 13 164 8.53e-45 155
MsG0780040754.01.T01 MTR_8g467490 40.828 169 87 1 2 157 6 174 1.19e-43 153
MsG0780040754.01.T01 MTR_3g096920 55.039 129 53 2 10 137 7 131 2.36e-43 151
MsG0780040754.01.T01 MTR_0036s0150 50.000 152 68 4 12 157 7 156 3.21e-43 155
MsG0780040754.01.T01 MTR_4g098630 48.148 162 73 4 7 159 3 162 2.25e-42 148
MsG0780040754.01.T01 MTR_2g079990 51.064 141 63 2 1 137 3 141 4.50e-42 149
MsG0780040754.01.T01 MTR_5g040420 41.772 158 80 1 12 157 16 173 5.23e-42 149
MsG0780040754.01.T01 MTR_1g090720 47.500 160 70 3 9 156 41 198 5.88e-42 150
MsG0780040754.01.T01 MTR_3g070040 37.657 239 124 8 14 237 12 240 1.13e-41 147
MsG0780040754.01.T01 MTR_6g011860 42.857 161 78 3 10 157 15 174 4.58e-41 146
MsG0780040754.01.T01 MTR_3g093040 41.270 189 101 4 9 189 107 293 1.11e-40 143
MsG0780040754.01.T01 MTR_1g090723 48.366 153 70 4 12 157 10 160 1.95e-40 149
MsG0780040754.01.T01 MTR_1g090723 50.000 152 68 5 12 157 10 159 2.06e-40 148
MsG0780040754.01.T01 MTR_1g090723 50.000 152 68 5 12 157 10 159 2.34e-40 148
MsG0780040754.01.T01 MTR_3g096140 45.695 151 74 3 12 156 9 157 1.12e-39 140
MsG0780040754.01.T01 MTR_4g134460 46.104 154 78 3 12 162 56 207 2.09e-39 143
MsG0780040754.01.T01 MTR_3g096140 45.695 151 74 3 12 156 9 157 5.13e-39 140
MsG0780040754.01.T01 MTR_5g069030 48.077 156 73 3 10 159 25 178 1.08e-38 144
MsG0780040754.01.T01 MTR_3g093050 46.497 157 76 3 9 159 21 175 2.35e-38 142
MsG0780040754.01.T01 MTR_3g093050 46.497 157 76 3 9 159 21 175 3.61e-38 142
MsG0780040754.01.T01 MTR_8g063550 43.137 153 79 3 10 156 6 156 1.97e-37 135
MsG0780040754.01.T01 MTR_8g063550 43.137 153 79 3 10 156 6 156 3.53e-37 137
MsG0780040754.01.T01 MTR_5g090970 40.881 159 80 2 12 156 20 178 7.39e-37 133
MsG0780040754.01.T01 MTR_8g063550 43.137 153 79 3 10 156 6 156 9.17e-37 136
MsG0780040754.01.T01 MTR_4g075980 42.953 149 79 3 12 157 17 162 1.49e-36 132
MsG0780040754.01.T01 MTR_1g097300 45.395 152 75 3 12 157 21 170 3.65e-36 136
MsG0780040754.01.T01 MTR_8g023840 46.259 147 74 4 10 153 11 155 4.11e-36 133
MsG0780040754.01.T01 MTR_5g090970 40.881 159 79 3 12 156 20 177 6.71e-35 128
MsG0780040754.01.T01 MTR_2g068880 42.331 163 76 4 12 156 24 186 8.46e-35 128
MsG0780040754.01.T01 MTR_2g068920 40.244 164 80 3 12 157 23 186 1.53e-34 127
MsG0780040754.01.T01 MTR_8g093580 41.176 153 82 3 10 156 6 156 1.88e-34 130
MsG0780040754.01.T01 MTR_2g086880 42.353 170 90 5 7 175 15 177 2.18e-34 130
MsG0780040754.01.T01 MTR_8g099750 41.290 155 80 3 8 153 12 164 2.53e-34 124
MsG0780040754.01.T01 MTR_2g086880 42.604 169 88 5 7 171 15 178 2.65e-34 131
MsG0780040754.01.T01 MTR_8g023860 43.537 147 78 4 10 153 12 156 2.62e-33 126
MsG0780040754.01.T01 MTR_3g098810 41.718 163 81 3 8 158 12 172 7.40e-33 121
MsG0780040754.01.T01 MTR_2g086690 41.401 157 78 5 11 154 5 160 2.35e-31 117
MsG0780040754.01.T01 MTR_4g094302 34.831 178 96 3 10 176 11 179 3.04e-31 115
MsG0780040754.01.T01 MTR_3g096140 43.066 137 70 3 26 156 2 136 5.60e-31 118
MsG0780040754.01.T01 MTR_8g023900 41.667 168 85 6 4 160 182 347 1.06e-30 120
MsG0780040754.01.T01 MTR_8g023900 37.634 186 108 5 6 184 8 192 2.54e-28 113
MsG0780040754.01.T01 MTR_3g098810 46.212 132 67 2 8 137 12 141 1.43e-30 113
MsG0780040754.01.T01 MTR_4g052620 38.365 159 81 5 10 154 5 160 2.72e-30 115
MsG0780040754.01.T01 MTR_8g023880 36.232 207 104 8 5 191 2 200 1.38e-29 113
MsG0780040754.01.T01 MTR_8g094580 44.697 132 61 3 58 181 1 128 3.23e-29 111
MsG0780040754.01.T01 MTR_4g094302 42.188 128 66 1 10 137 11 130 1.36e-28 107
MsG0780040754.01.T01 MTR_7g105170 35.366 164 90 5 10 158 4 166 2.92e-28 109
MsG0780040754.01.T01 MTR_8g023930 39.869 153 87 4 10 159 24 174 9.92e-28 112
MsG0780040754.01.T01 MTR_7g070140 53.750 80 37 0 65 144 19 98 2.04e-25 98.6
MsG0780040754.01.T01 MTR_8g093790 37.500 152 77 5 8 159 8 141 1.13e-21 90.1
MsG0780040754.01.T01 MTR_7g070150 50.725 69 33 1 101 168 1 69 7.62e-19 80.1
MsG0780040754.01.T01 MTR_3g096400 29.545 176 82 6 8 158 5 163 2.03e-16 76.6
MsG0780040754.01.T01 MTR_7g083330 30.968 155 86 6 7 158 15 151 2.23e-16 76.3
MsG0780040754.01.T01 MTR_7g083370 33.784 148 82 5 1 141 1 139 2.24e-16 74.7
MsG0780040754.01.T01 MTR_7g083360 29.932 147 97 4 1 145 1 143 6.59e-14 68.6
MsG0780040754.01.T01 MTR_2g014680 29.480 173 103 6 9 165 52 221 8.78e-13 67.8
MsG0780040754.01.T01 MTR_4g088245 28.977 176 106 6 9 168 67 239 1.55e-11 64.3
MsG0780040754.01.T01 MTR_5g053430 28.994 169 96 7 9 159 57 219 2.44e-11 64.3
MsG0780040754.01.T01 MTR_5g053430 28.994 169 96 7 9 159 57 219 2.56e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040754.01.T01 AT4G28530 73.143 175 31 2 1 159 1 175 3.20e-93 280
MsG0780040754.01.T01 AT1G56010 47.009 234 100 5 6 231 15 232 1.24e-64 206
MsG0780040754.01.T01 AT3G12977 57.051 156 60 3 6 156 14 167 1.72e-61 196
MsG0780040754.01.T01 AT1G76420 56.688 157 65 1 9 162 21 177 2.66e-61 197
MsG0780040754.01.T01 AT2G24430 54.902 153 66 1 9 158 15 167 2.46e-60 194
MsG0780040754.01.T01 AT2G24430 54.902 153 66 1 9 158 15 167 2.46e-60 194
MsG0780040754.01.T01 AT4G28530 54.286 175 27 3 1 159 1 138 1.19e-58 190
MsG0780040754.01.T01 AT5G53950 55.844 154 62 1 10 157 17 170 3.70e-58 191
MsG0780040754.01.T01 AT3G18400 56.291 151 61 3 10 157 5 153 4.50e-58 189
MsG0780040754.01.T01 AT5G61430 57.143 154 58 3 10 157 16 167 4.63e-58 189
MsG0780040754.01.T01 AT5G07680 56.494 154 59 3 10 157 3 154 6.18e-58 188
MsG0780040754.01.T01 AT5G07680 56.494 154 59 3 10 157 17 168 9.46e-58 188
MsG0780040754.01.T01 AT4G36160 48.718 195 90 6 5 194 5 194 1.70e-56 186
MsG0780040754.01.T01 AT4G36160 48.718 195 90 6 5 194 5 194 1.70e-56 186
MsG0780040754.01.T01 AT4G36160 48.718 195 90 6 5 194 9 198 2.16e-56 186
MsG0780040754.01.T01 AT2G18060 46.875 192 92 5 8 194 7 193 1.17e-55 184
MsG0780040754.01.T01 AT2G18060 46.875 192 92 5 8 194 7 193 1.17e-55 184
MsG0780040754.01.T01 AT3G15170 50.617 162 74 1 10 165 20 181 2.29e-55 181
MsG0780040754.01.T01 AT5G39610 55.556 153 60 3 10 156 20 170 2.65e-55 181
MsG0780040754.01.T01 AT1G71930 41.975 243 111 6 6 243 5 222 4.61e-55 181
MsG0780040754.01.T01 AT1G71930 41.975 243 111 6 6 243 5 222 4.61e-55 181
MsG0780040754.01.T01 AT5G18270 55.556 153 61 3 10 156 21 172 1.42e-54 180
MsG0780040754.01.T01 AT5G18270 55.556 153 61 3 10 156 21 172 1.73e-54 180
MsG0780040754.01.T01 AT3G29035 48.936 188 74 4 10 191 24 195 3.15e-54 179
MsG0780040754.01.T01 AT1G12260 53.247 154 65 3 8 156 5 156 6.24e-54 179
MsG0780040754.01.T01 AT3G04060 54.902 153 62 3 10 156 20 171 7.43e-54 178
MsG0780040754.01.T01 AT1G12260 53.247 154 65 3 8 156 5 156 8.90e-54 180
MsG0780040754.01.T01 AT4G10350 46.535 202 82 6 8 185 7 206 9.03e-54 178
MsG0780040754.01.T01 AT5G66300 52.830 159 67 4 4 156 6 162 1.36e-53 176
MsG0780040754.01.T01 AT3G04070 47.368 171 76 2 1 157 1 171 3.78e-53 177
MsG0780040754.01.T01 AT1G33280 49.727 183 81 5 8 181 6 186 4.68e-53 176
MsG0780040754.01.T01 AT1G62700 52.597 154 66 3 8 156 5 156 1.34e-52 177
MsG0780040754.01.T01 AT1G62700 52.597 154 66 3 8 156 5 156 1.34e-52 177
MsG0780040754.01.T01 AT5G62380 52.147 163 71 4 8 165 5 165 1.69e-51 172
MsG0780040754.01.T01 AT5G62380 52.147 163 71 4 8 165 5 165 1.69e-51 172
MsG0780040754.01.T01 AT3G03200 53.846 156 63 3 8 156 4 157 2.53e-51 176
MsG0780040754.01.T01 AT3G17730 52.258 155 66 3 8 156 4 156 3.87e-51 169
MsG0780040754.01.T01 AT5G17260 52.564 156 65 3 8 156 4 157 6.96e-51 174
MsG0780040754.01.T01 AT3G04070 43.316 187 76 2 1 157 1 187 1.03e-50 171
MsG0780040754.01.T01 AT1G54330 55.629 151 62 3 9 156 5 153 5.19e-50 167
MsG0780040754.01.T01 AT3G15510 41.117 197 100 3 14 195 21 216 4.47e-49 167
MsG0780040754.01.T01 AT1G79580 51.974 152 68 3 9 156 16 166 1.11e-48 166
MsG0780040754.01.T01 AT1G79580 51.974 152 68 3 9 156 16 166 1.11e-48 166
MsG0780040754.01.T01 AT1G79580 51.974 152 68 3 9 156 16 166 1.11e-48 166
MsG0780040754.01.T01 AT1G79580 51.974 152 68 3 9 156 16 166 1.11e-48 166
MsG0780040754.01.T01 AT1G79580 51.974 152 68 3 9 156 16 166 1.11e-48 166
MsG0780040754.01.T01 AT1G61110 47.486 179 74 4 1 160 4 181 1.56e-48 164
MsG0780040754.01.T01 AT1G01720 43.590 195 97 3 10 196 7 196 2.98e-48 162
MsG0780040754.01.T01 AT1G65910 53.125 160 67 3 8 161 4 161 3.07e-48 170
MsG0780040754.01.T01 AT1G32770 45.181 166 72 3 8 156 14 177 5.95e-48 164
MsG0780040754.01.T01 AT5G08790 43.750 192 96 2 10 192 7 195 8.60e-48 161
MsG0780040754.01.T01 AT3G61910 41.463 205 96 4 8 190 9 211 4.45e-47 160
MsG0780040754.01.T01 AT1G69490 46.497 157 74 2 8 156 7 161 5.81e-47 159
MsG0780040754.01.T01 AT2G46770 44.379 169 72 3 8 156 14 180 6.17e-47 161
MsG0780040754.01.T01 AT1G52890 46.199 171 86 2 9 175 13 181 6.37e-47 160
MsG0780040754.01.T01 AT3G15500 48.780 164 74 3 1 156 1 162 1.08e-46 159
MsG0780040754.01.T01 AT4G27410 48.485 165 75 4 1 157 1 163 1.09e-46 159
MsG0780040754.01.T01 AT5G46590 41.784 213 109 5 8 213 4 208 1.82e-46 158
MsG0780040754.01.T01 AT5G63790 49.359 156 67 2 10 156 50 202 2.53e-46 158
MsG0780040754.01.T01 AT5G63790 49.359 156 67 2 10 156 60 212 3.07e-46 158
MsG0780040754.01.T01 AT3G10480 50.318 157 69 3 7 156 24 178 3.99e-46 161
MsG0780040754.01.T01 AT4G35580 45.050 202 101 4 9 202 8 207 4.33e-46 162
MsG0780040754.01.T01 AT4G35580 45.050 202 101 4 9 202 8 207 4.99e-46 162
MsG0780040754.01.T01 AT4G35580 45.050 202 101 4 9 202 8 207 5.39e-46 162
MsG0780040754.01.T01 AT3G10490 47.531 162 76 3 2 156 19 178 1.06e-45 154
MsG0780040754.01.T01 AT1G77450 48.428 159 70 3 7 156 5 160 1.14e-45 155
MsG0780040754.01.T01 AT5G04410 49.677 155 70 3 9 157 8 160 1.48e-45 162
MsG0780040754.01.T01 AT1G33060 43.842 203 105 4 9 205 23 222 4.07e-45 162
MsG0780040754.01.T01 AT1G33060 43.842 203 105 4 9 205 23 222 4.27e-45 162
MsG0780040754.01.T01 AT3G10480 51.282 156 68 4 7 156 24 177 5.59e-45 158
MsG0780040754.01.T01 AT3G10490 47.531 162 76 3 2 156 19 178 1.36e-44 157
MsG0780040754.01.T01 AT5G13180 35.484 248 138 4 10 253 14 243 3.80e-44 151
MsG0780040754.01.T01 AT3G10500 49.032 155 71 3 9 157 8 160 8.49e-44 157
MsG0780040754.01.T01 AT1G56010 46.961 181 73 4 58 231 1 165 1.67e-43 149
MsG0780040754.01.T01 AT5G39820 35.169 236 109 4 12 208 22 252 2.08e-43 151
MsG0780040754.01.T01 AT5G46590 40.385 208 108 4 8 213 4 197 2.98e-43 149
MsG0780040754.01.T01 AT4G27410 45.055 182 73 6 1 157 1 180 4.70e-43 150
MsG0780040754.01.T01 AT4G17980 48.428 159 70 3 8 156 4 160 5.74e-43 148
MsG0780040754.01.T01 AT4G17980 47.826 161 72 3 8 158 4 162 7.37e-43 149
MsG0780040754.01.T01 AT1G32510 46.667 165 76 3 6 158 2 166 1.03e-42 148
MsG0780040754.01.T01 AT2G33480 46.795 156 76 3 10 163 15 165 2.04e-41 144
MsG0780040754.01.T01 AT2G33480 46.203 158 76 3 10 163 15 167 4.44e-41 143
MsG0780040754.01.T01 AT2G02450 41.436 181 85 4 12 174 53 230 5.57e-41 146
MsG0780040754.01.T01 AT2G02450 41.436 181 85 4 12 174 53 230 9.93e-41 146
MsG0780040754.01.T01 AT1G26870 40.741 162 81 2 10 157 16 176 1.11e-40 146
MsG0780040754.01.T01 AT3G12977 60.748 107 35 3 55 156 10 114 1.99e-40 140
MsG0780040754.01.T01 AT2G43000 43.312 157 80 3 12 162 20 173 3.00e-40 141
MsG0780040754.01.T01 AT5G24590 47.742 155 74 3 8 156 11 164 4.63e-40 145
MsG0780040754.01.T01 AT3G10480 42.105 190 68 4 7 156 24 211 6.62e-40 146
MsG0780040754.01.T01 AT3G49530 44.231 156 80 3 9 158 12 166 5.11e-39 141
MsG0780040754.01.T01 AT3G49530 44.805 154 78 3 9 156 12 164 1.60e-38 141
MsG0780040754.01.T01 AT2G27300 46.259 147 73 3 8 153 12 153 1.64e-38 138
MsG0780040754.01.T01 AT1G52880 43.860 171 74 4 14 169 21 184 2.92e-38 137
MsG0780040754.01.T01 AT5G09330 44.444 153 77 3 10 156 6 156 1.08e-37 139
MsG0780040754.01.T01 AT5G09330 44.444 153 77 3 10 156 6 156 1.08e-37 139
MsG0780040754.01.T01 AT5G09330 44.444 153 77 3 10 156 6 156 1.08e-37 139
MsG0780040754.01.T01 AT5G09330 44.444 153 77 3 10 156 6 156 1.08e-37 139
MsG0780040754.01.T01 AT5G09330 44.444 153 77 3 10 156 6 156 1.08e-37 139
MsG0780040754.01.T01 AT2G17040 42.857 147 82 2 12 157 8 153 8.76e-37 132
MsG0780040754.01.T01 AT1G34180 41.401 157 84 3 7 157 13 167 9.27e-37 136
MsG0780040754.01.T01 AT5G61430 59.434 106 35 3 58 157 1 104 1.01e-36 132
MsG0780040754.01.T01 AT1G34180 42.105 152 80 3 12 157 18 167 3.78e-36 136
MsG0780040754.01.T01 AT4G10350 46.452 155 57 6 55 185 7 159 8.19e-36 130
MsG0780040754.01.T01 AT1G34190 42.105 152 80 3 12 157 18 167 1.43e-35 134
MsG0780040754.01.T01 AT1G34180 38.462 169 84 3 7 157 13 179 1.25e-34 130
MsG0780040754.01.T01 AT1G34180 39.024 164 80 3 12 157 18 179 5.19e-34 130
MsG0780040754.01.T01 AT3G12910 43.636 165 73 5 12 157 23 186 9.74e-34 125
MsG0780040754.01.T01 AT1G32870 44.937 158 75 4 8 157 8 161 1.80e-33 128
MsG0780040754.01.T01 AT1G32870 44.937 158 75 4 8 157 8 161 1.95e-33 128
MsG0780040754.01.T01 AT5G64060 39.869 153 84 3 10 156 6 156 2.88e-33 125
MsG0780040754.01.T01 AT1G32870 44.937 158 75 4 8 157 44 197 3.29e-33 128
MsG0780040754.01.T01 AT5G04395 42.384 151 73 2 1 137 19 169 3.90e-32 117
MsG0780040754.01.T01 AT5G22290 38.012 171 95 5 4 168 10 175 6.33e-32 121
MsG0780040754.01.T01 AT3G44290 40.559 143 79 3 12 153 16 153 1.56e-30 115
MsG0780040754.01.T01 AT3G44290 40.559 143 79 3 12 153 16 153 7.32e-30 115
MsG0780040754.01.T01 AT3G44350 35.648 216 116 8 6 205 1 209 1.42e-29 112
MsG0780040754.01.T01 AT4G01550 36.598 194 104 6 13 200 7 187 4.37e-29 115
MsG0780040754.01.T01 AT5G64530 32.418 182 91 4 10 171 3 172 3.13e-26 102
MsG0780040754.01.T01 AT3G44350 41.912 136 73 3 6 136 1 135 3.60e-26 101
MsG0780040754.01.T01 AT2G33480 48.077 104 48 2 64 163 9 110 1.05e-25 101
MsG0780040754.01.T01 AT4G01520 37.013 154 89 6 11 158 5 156 3.67e-24 99.8
MsG0780040754.01.T01 AT5G22380 37.013 154 84 5 13 154 8 160 4.54e-24 97.8
MsG0780040754.01.T01 AT4G01540 36.842 152 88 6 13 158 7 156 5.02e-23 98.2
MsG0780040754.01.T01 AT4G01540 36.842 152 88 6 13 158 7 156 5.08e-23 97.8
MsG0780040754.01.T01 AT4G01540 36.842 152 88 6 13 158 7 156 5.74e-23 98.2
MsG0780040754.01.T01 AT4G01540 36.842 152 88 6 13 158 7 156 5.86e-23 98.6
MsG0780040754.01.T01 AT1G02230 36.364 154 90 5 11 159 4 154 1.23e-22 96.7
MsG0780040754.01.T01 AT5G64530 36.719 128 69 2 10 137 3 118 1.71e-22 91.7
MsG0780040754.01.T01 AT2G18060 56.944 72 27 3 87 156 1 70 3.60e-22 94.0
MsG0780040754.01.T01 AT3G04420 33.333 150 93 4 11 156 4 150 5.20e-21 90.9
MsG0780040754.01.T01 AT3G04420 33.333 150 93 4 11 156 4 150 1.27e-20 90.5
MsG0780040754.01.T01 AT3G10490 53.165 79 30 2 83 156 2 78 8.40e-19 85.5
MsG0780040754.01.T01 AT3G10490 53.165 79 30 2 83 156 2 78 8.40e-19 85.5
MsG0780040754.01.T01 AT1G01010 33.750 160 91 6 13 161 6 161 2.67e-18 84.7
MsG0780040754.01.T01 AT2G43000 42.857 98 47 3 71 162 1 95 1.04e-17 79.7
MsG0780040754.01.T01 AT1G02250 32.432 148 92 4 11 153 4 148 2.53e-17 81.6
MsG0780040754.01.T01 AT5G50820 37.226 137 62 5 10 137 17 138 1.76e-16 76.3
MsG0780040754.01.T01 AT1G02220 31.008 129 80 4 11 135 4 127 3.33e-16 78.6
MsG0780040754.01.T01 AT3G04430 35.507 138 75 5 16 141 6 141 3.28e-15 73.2
MsG0780040754.01.T01 AT3G56530 27.815 151 102 4 9 154 51 199 2.49e-14 72.4
MsG0780040754.01.T01 AT5G14000 30.827 133 86 3 7 137 12 140 5.13e-13 65.9
MsG0780040754.01.T01 AT5G14000 25.581 172 121 4 7 175 12 179 2.07e-12 65.5
MsG0780040754.01.T01 AT1G28470 31.325 166 95 7 9 158 76 238 3.19e-12 66.2
MsG0780040754.01.T01 AT3G55210 26.994 163 103 4 6 154 7 167 3.37e-12 65.9
MsG0780040754.01.T01 AT5G22290 42.500 80 41 3 89 168 2 76 5.55e-12 64.7
MsG0780040754.01.T01 AT4G29230 29.319 191 101 10 10 172 47 231 3.44e-11 63.9
MsG0780040754.01.T01 AT4G29230 29.319 191 101 10 10 172 48 232 3.51e-11 63.9
MsG0780040754.01.T01 AT4G29230 29.016 193 103 10 8 172 46 232 5.84e-11 63.2

Find 70 sgRNAs with CRISPR-Local

Find 198 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAACCGTGCTATTATTATT+TGG 0.209937 7:+81964629 None:intergenic
CTGAAGCCACACCATCTTCT+AGG 0.277699 7:+81964540 None:intergenic
CACAAATGAGGAAGTTCTTA+AGG 0.329369 7:-81968209 MsG0780040754.01.T01:CDS
ACAAACAGAGCAACTATATC+TGG 0.343800 7:-81965966 MsG0780040754.01.T01:CDS
ATGGTATTTCTTTAGCTTCC+GGG 0.345420 7:-81966015 MsG0780040754.01.T01:CDS
GAGCAACTATATCTGGATAT+TGG 0.349161 7:-81965959 MsG0780040754.01.T01:CDS
GCTCCAAATGGTATCAAAAC+AGG 0.356435 7:-81965846 MsG0780040754.01.T01:CDS
TCATCATGGAAGAATTGTTT+TGG 0.356600 7:+81964681 None:intergenic
TGTGAACCATGGCAGCTTCC+AGG 0.356905 7:-81968157 MsG0780040754.01.T01:intron
ATTCTTGTGGAACATGGATT+TGG 0.363780 7:-81964573 MsG0780040754.01.T01:CDS
TCTGGATATTGGAAAGCAAC+TGG 0.367759 7:-81965948 MsG0780040754.01.T01:CDS
GAGATGATGACATCAAAGTT+AGG 0.374943 7:+81964792 None:intergenic
CCTACAACCTCTTGTGTGAT+TGG 0.380585 7:+81965903 None:intergenic
TTATCCAAGTGATGAGGAAT+TGG 0.381621 7:-81968257 MsG0780040754.01.T01:CDS
GAATTGTTGTGTGTTGAGTT+TGG 0.385310 7:+81964838 None:intergenic
TCCAAAGGTGATGATGGATA+TGG 0.397088 7:-81964596 MsG0780040754.01.T01:CDS
AATGGTATTTCTTTAGCTTC+CGG 0.397370 7:-81966016 MsG0780040754.01.T01:CDS
TATAGCCACTAGGGATGGTT+TGG 0.417138 7:+81964759 None:intergenic
GGGATGGTTTGGTAATTTGT+TGG 0.418314 7:+81964770 None:intergenic
TAAATCCAGTTGCATATTTG+CGG 0.420581 7:+81965991 None:intergenic
TCCATATCCATCATCACCTT+TGG 0.424892 7:+81964595 None:intergenic
GAAAGACATTGGTGTTCTAT+AGG 0.425789 7:-81965875 MsG0780040754.01.T01:CDS
CTTGGATGCAATAAGATTTG+AGG 0.438363 7:-81964516 MsG0780040754.01.T01:CDS
CGGGACCGCAAATATGCAAC+TGG 0.444721 7:-81965996 MsG0780040754.01.T01:CDS
TTTGTTGATCACAGGAGGAC+TGG 0.451819 7:-81964919 MsG0780040754.01.T01:intron
CAGTTGCATATTTGCGGTCC+CGG 0.454823 7:+81965997 None:intergenic
CCAATCACACAAGAGGTTGT+AGG 0.461134 7:-81965903 MsG0780040754.01.T01:CDS
ATTAGTTCCAAAGGTGATGA+TGG 0.463352 7:-81964602 MsG0780040754.01.T01:CDS
CACACCAATTCCTCATCACT+TGG 0.483760 7:+81968253 None:intergenic
CTTGGATAAAATCGAAATCC+AGG 0.488698 7:+81968271 None:intergenic
TTGTTGATCACAGGAGGACT+GGG 0.497348 7:-81964918 MsG0780040754.01.T01:intron
ACAAATGAGGAAGTTCTTAA+GGG 0.506795 7:-81968208 MsG0780040754.01.T01:CDS
CTGTTTCACGAGAATATTGA+AGG 0.508957 7:+81964654 None:intergenic
AGATGATGACATCAAAGTTA+GGG 0.519573 7:+81964793 None:intergenic
CAATCACACAAGAGGTTGTA+GGG 0.525240 7:-81965902 MsG0780040754.01.T01:CDS
ATAGGAGCTTCACTACCTCC+TGG 0.533290 7:-81968289 MsG0780040754.01.T01:CDS
CTGGATATTGGAAAGCAACT+GGG 0.545781 7:-81965947 MsG0780040754.01.T01:CDS
TAAATGATGAAGTGTTGTCA+TGG 0.547733 7:+81964712 None:intergenic
AGATGGTGTGGCTTCAGACT+TGG 0.547899 7:-81964534 MsG0780040754.01.T01:CDS
TATATACCTGGAAGCTGCCA+TGG 0.548318 7:+81968151 None:intergenic
CAAGTTTGTTATAGCCACTA+GGG 0.549346 7:+81964750 None:intergenic
GAAGAAAATAGCCTAGAAGA+TGG 0.553895 7:-81964551 MsG0780040754.01.T01:CDS
CAAAGCTTAATGCAAATGAA+TGG 0.555762 7:-81966034 MsG0780040754.01.T01:CDS
ATATGGATTCTTGTGGAACA+TGG 0.561084 7:-81964579 MsG0780040754.01.T01:CDS
AAATGATGAAGTGTTGTCAT+GGG 0.565391 7:+81964713 None:intergenic
GACACCACACATGCCTCCTA+AGG 0.568201 7:-81965796 MsG0780040754.01.T01:intron
TTTGTTATAGCCACTAGGGA+TGG 0.575379 7:+81964754 None:intergenic
GTTACTCAAATTAGTTCCAA+AGG 0.576717 7:-81964611 MsG0780040754.01.T01:CDS
GTCATGGGTTTGAGAGACAT+AGG 0.581509 7:-81968307 MsG0780040754.01.T01:CDS
AGCAACTGGGAAAGATCGTA+TGG 0.583285 7:-81965934 MsG0780040754.01.T01:CDS
TCAAGTTTGTTATAGCCACT+AGG 0.587656 7:+81964749 None:intergenic
TATAGGAATAGAGCTCCAAA+TGG 0.588028 7:-81965858 MsG0780040754.01.T01:CDS
TGAGGTTGATAATGATAATG+TGG 0.588693 7:-81964498 MsG0780040754.01.T01:CDS
TGTAGGGATGAGAAAGACAT+TGG 0.588790 7:-81965886 MsG0780040754.01.T01:CDS
GATGACATCAAAGTTAGGGA+TGG 0.596756 7:+81964797 None:intergenic
CTCCAAATGGTATCAAAACA+GGG 0.600706 7:-81965845 MsG0780040754.01.T01:CDS
GACATCAAAGTTAGGGATGG+AGG 0.613884 7:+81964800 None:intergenic
ATATTGAAGGAGATTCATCA+TGG 0.619903 7:+81964667 None:intergenic
CTCACCTTAGGAGGCATGTG+TGG 0.621337 7:+81965792 None:intergenic
AAATAGCCTAGAAGATGGTG+TGG 0.624894 7:-81964546 MsG0780040754.01.T01:CDS
GCCATGGTTCACATATGTGA+AGG 0.625702 7:+81968167 None:intergenic
ATGATGGATATGGATTCTTG+TGG 0.648298 7:-81964586 MsG0780040754.01.T01:CDS
AGATCCAAATAATAATAGCA+CGG 0.654615 7:-81964633 MsG0780040754.01.T01:CDS
GTTAGATCCAATCACACAAG+AGG 0.657130 7:-81965910 MsG0780040754.01.T01:CDS
AATGATGAAGTGTTGTCATG+GGG 0.659787 7:+81964714 None:intergenic
ATGATGAAGTGTTGTCATGG+GGG 0.660202 7:+81964715 None:intergenic
ACCTTCACATATGTGAACCA+TGG 0.672346 7:-81968168 MsG0780040754.01.T01:CDS
AATTACCAAACCATCCCTAG+TGG 0.692848 7:-81964764 MsG0780040754.01.T01:CDS
CAAATGGTATCAAAACAGGG+TGG 0.731036 7:-81965842 MsG0780040754.01.T01:CDS
GGATAAAATCGAAATCCAGG+AGG 0.731687 7:+81968274 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTTAAAAAAAAAAAATCTAA+GGG - Chr7:81967703-81967722 MsG0780040754.01.T01:intron 10.0%
!! TGTTAAAAAAAAAAAATCTA+AGG - Chr7:81967702-81967721 MsG0780040754.01.T01:intron 10.0%
!! TTTCAAATAACAAAATTAAT+TGG - Chr7:81966190-81966209 MsG0780040754.01.T01:intron 10.0%
!!! AAATAGCTTTTTAATTTTTA+TGG + Chr7:81966257-81966276 None:intergenic 10.0%
!!! AGAACTTATTTTATTTAATA+TGG + Chr7:81967456-81967475 None:intergenic 10.0%
!!! ATCAAAAGTATAAAAATTAA+GGG - Chr7:81967124-81967143 MsG0780040754.01.T01:intron 10.0%
!!! TTTAAGATAGATAAAAAAAT+TGG - Chr7:81965870-81965889 MsG0780040754.01.T01:CDS 10.0%
!!! TTTTATATGAAAAAAATACA+GGG + Chr7:81965700-81965719 None:intergenic 10.0%
!!! TTTTTATATGAAAAAAATAC+AGG + Chr7:81965701-81965720 None:intergenic 10.0%
!! AGAATACAAGAAAAATATAA+AGG - Chr7:81965094-81965113 MsG0780040754.01.T01:intron 15.0%
!! CATTCAATAAATAAAGTAAT+AGG - Chr7:81965165-81965184 MsG0780040754.01.T01:intron 15.0%
!! GAATACAAGAAAAATATAAA+GGG - Chr7:81965095-81965114 MsG0780040754.01.T01:intron 15.0%
!! TATGACAAATGAAAAATAAA+AGG - Chr7:81967748-81967767 MsG0780040754.01.T01:intron 15.0%
!! TTTATATGAAAAAAATACAG+GGG + Chr7:81965699-81965718 None:intergenic 15.0%
!!! AAAAAAAAAATTTTGAAGGA+AGG - Chr7:81966225-81966244 MsG0780040754.01.T01:intron 15.0%
!!! CACATATATTTTTGTTAATT+AGG - Chr7:81967842-81967861 MsG0780040754.01.T01:intron 15.0%
!!! CATCAAAAGTATAAAAATTA+AGG - Chr7:81967123-81967142 MsG0780040754.01.T01:intron 15.0%
!!! TGGAATTTTTTTTTTTTGAA+GGG + Chr7:81965658-81965677 None:intergenic 15.0%
!!! TTAATAATTTGTTTGATTTC+TGG - Chr7:81964762-81964781 MsG0780040754.01.T01:CDS 15.0%
!!! TTGGAATTTTTTTTTTTTGA+AGG + Chr7:81965659-81965678 None:intergenic 15.0%
!!! TTTGCTACTAATTTTTTTAA+AGG + Chr7:81966407-81966426 None:intergenic 15.0%
!! AAGTAAAAATTCATTCGTAT+TGG - Chr7:81967495-81967514 MsG0780040754.01.T01:intron 20.0%
!! AATTATCTGAATTATCTTCA+TGG - Chr7:81964718-81964737 MsG0780040754.01.T01:CDS 20.0%
!! CTAAGAATAATATTACTGTA+TGG + Chr7:81965579-81965598 None:intergenic 20.0%
!! TATGGATAAAGAAGAAAAAA+GGG - Chr7:81967315-81967334 MsG0780040754.01.T01:intron 20.0%
!! TTTCCATATTTAGCAAAATA+TGG + Chr7:81965005-81965024 None:intergenic 20.0%
!!! AGATAATATTTATCCTTTTG+CGG - Chr7:81965430-81965449 MsG0780040754.01.T01:intron 20.0%
!!! ATTTGGAACTTGAAAAAAAT+TGG - Chr7:81966508-81966527 MsG0780040754.01.T01:intron 20.0%
!!! CTATTTTTTTATATACGTAC+GGG - Chr7:81966271-81966290 MsG0780040754.01.T01:intron 20.0%
!!! GCTATTTTTTTATATACGTA+CGG - Chr7:81966270-81966289 MsG0780040754.01.T01:intron 20.0%
!!! GGAATTTTTTTTTTTTGAAG+GGG + Chr7:81965657-81965676 None:intergenic 20.0%
!!! GTTTTTAAATGATTGAATGT+TGG - Chr7:81967425-81967444 MsG0780040754.01.T01:intron 20.0%
!!! TTTTCTTCTTTCAGTTAAAA+CGG - Chr7:81965383-81965402 MsG0780040754.01.T01:intron 20.0%
!!! TTTTTTTTAACATGCGAAAA+TGG + Chr7:81967694-81967713 None:intergenic 20.0%
! AAAAATATAAAGGGATGGAA+AGG - Chr7:81965104-81965123 MsG0780040754.01.T01:intron 25.0%
! AAGTTCTATTAGTTAGTTGT+TGG - Chr7:81967469-81967488 MsG0780040754.01.T01:intron 25.0%
! AATACATAAAAACTCACCTT+AGG + Chr7:81967014-81967033 None:intergenic 25.0%
! ACAAGAAAAATATAAAGGGA+TGG - Chr7:81965099-81965118 MsG0780040754.01.T01:intron 25.0%
! ACAAGACAACTATATACAAA+AGG + Chr7:81965274-81965293 None:intergenic 25.0%
! AGAAGAAAAATGATGAGATA+AGG + Chr7:81965372-81965391 None:intergenic 25.0%
! AGATCCAAATAATAATAGCA+CGG - Chr7:81968158-81968177 MsG0780040754.01.T01:CDS 25.0%
! ATAATATCATCCATCTTCTA+TGG - Chr7:81967297-81967316 MsG0780040754.01.T01:intron 25.0%
! ATCTTAAACGTAAAACTGAA+GGG + Chr7:81965858-81965877 None:intergenic 25.0%
! ATTAATTGATGTAGATTTGC+TGG - Chr7:81965234-81965253 MsG0780040754.01.T01:intron 25.0%
! CTATGGATAAAGAAGAAAAA+AGG - Chr7:81967314-81967333 MsG0780040754.01.T01:intron 25.0%
! GAAATGAGATAATAGTAAGA+AGG - Chr7:81966359-81966378 MsG0780040754.01.T01:intron 25.0%
! GCATAATTAACATATATACC+TGG + Chr7:81964655-81964674 None:intergenic 25.0%
! TAAAAATTCATTCGTATTGG+TGG - Chr7:81967498-81967517 MsG0780040754.01.T01:intron 25.0%
! TATCTTAAACGTAAAACTGA+AGG + Chr7:81965859-81965878 None:intergenic 25.0%
! TTACAAAAAGATCACAAATG+AGG - Chr7:81964570-81964589 MsG0780040754.01.T01:CDS 25.0%
! TTCAAAATTTGTAACCACTA+TGG - Chr7:81966454-81966473 MsG0780040754.01.T01:intron 25.0%
! TTTCCTATATTTCATCATGA+GGG + Chr7:81966107-81966126 None:intergenic 25.0%
!! AAAGGTTTACCTTAATTTGA+TGG - Chr7:81967766-81967785 MsG0780040754.01.T01:intron 25.0%
!! TTTTCCTATATTTCATCATG+AGG + Chr7:81966108-81966127 None:intergenic 25.0%
!!! AAAAATTTTGAAGGAAGGTA+TGG - Chr7:81966230-81966249 MsG0780040754.01.T01:intron 25.0%
!!! AATCTAAGAAAGTGTTCTTT+TGG + Chr7:81965036-81965055 None:intergenic 25.0%
!!! CTCTTACTTTTTATTTTACC+CGG + Chr7:81966167-81966186 None:intergenic 25.0%
!!! TCTTACTTTTTATTTTACCC+GGG + Chr7:81966166-81966185 None:intergenic 25.0%
!!! TTTGAGTTCTATTTTCTACA+AGG - Chr7:81965329-81965348 MsG0780040754.01.T01:intron 25.0%
!!! TTTTATTTTTGTGTGTAACC+CGG - Chr7:81966145-81966164 MsG0780040754.01.T01:intron 25.0%
AAATACACGCCATCAAATTA+AGG + Chr7:81967778-81967797 None:intergenic 30.0%
ACAAATGAGGAAGTTCTTAA+GGG - Chr7:81964583-81964602 MsG0780040754.01.T01:CDS 30.0%
ACATCAAGAATGAAACATGA+AGG - Chr7:81967376-81967395 MsG0780040754.01.T01:intron 30.0%
AGATGATGACATCAAAGTTA+GGG + Chr7:81968001-81968020 None:intergenic 30.0%
ATATTGAAGGAGATTCATCA+TGG + Chr7:81968127-81968146 None:intergenic 30.0%
ATGCATGAAATAACACATGA+TGG + Chr7:81966722-81966741 None:intergenic 30.0%
CAAAGCTTAATGCAAATGAA+TGG - Chr7:81966757-81966776 MsG0780040754.01.T01:intron 30.0%
CATCAAGAATGAAACATGAA+GGG - Chr7:81967377-81967396 MsG0780040754.01.T01:intron 30.0%
GTTACTCAAATTAGTTCCAA+AGG - Chr7:81968180-81968199 MsG0780040754.01.T01:CDS 30.0%
GTTGTTGTCTATATAGTTGT+TGG - Chr7:81966664-81966683 MsG0780040754.01.T01:intron 30.0%
TAAATCCAGTTGCATATTTG+CGG + Chr7:81966803-81966822 None:intergenic 30.0%
TAGAGAGTCATATCAAAGAA+AGG + Chr7:81966024-81966043 None:intergenic 30.0%
TCTTCTTTATCCATAGAAGA+TGG + Chr7:81967310-81967329 None:intergenic 30.0%
TGAGATAATAGTAAGAAGGA+AGG - Chr7:81966363-81966382 MsG0780040754.01.T01:intron 30.0%
TGCATGAAATAACACATGAT+GGG + Chr7:81966721-81966740 None:intergenic 30.0%
TTCCTATATTTCATCATGAG+GGG + Chr7:81966106-81966125 None:intergenic 30.0%
! AAATTTTTGTTGATCACAGG+AGG - Chr7:81967867-81967886 MsG0780040754.01.T01:intron 30.0%
! AATGGTATTTCTTTAGCTTC+CGG - Chr7:81966775-81966794 MsG0780040754.01.T01:intron 30.0%
! ACTTTGTATTTTACCGCAAA+AGG + Chr7:81965446-81965465 None:intergenic 30.0%
! CTAATGCCAATTTTGTGTAA+GGG - Chr7:81967531-81967550 MsG0780040754.01.T01:intron 30.0%
! CTGCCATATTTTGCTAAATA+TGG - Chr7:81964999-81965018 MsG0780040754.01.T01:intron 30.0%
! GTAACCGTGCTATTATTATT+TGG + Chr7:81968165-81968184 None:intergenic 30.0%
! GTCAAATTTTTGTTGATCAC+AGG - Chr7:81967864-81967883 MsG0780040754.01.T01:intron 30.0%
! GTGAAATAACCTATGTTTTG+AGG + Chr7:81964879-81964898 None:intergenic 30.0%
! TAATGCCAATTTTGTGTAAG+GGG - Chr7:81967532-81967551 MsG0780040754.01.T01:intron 30.0%
! TCATCATGGAAGAATTGTTT+TGG + Chr7:81968113-81968132 None:intergenic 30.0%
!! AAATGATGAAGTGTTGTCAT+GGG + Chr7:81968081-81968100 None:intergenic 30.0%
!! TAAATGATGAAGTGTTGTCA+TGG + Chr7:81968082-81968101 None:intergenic 30.0%
!! TGAGGTTGATAATGATAATG+TGG - Chr7:81968293-81968312 MsG0780040754.01.T01:CDS 30.0%
!!! AATAACCTATGTTTTGAGGT+TGG + Chr7:81964875-81964894 None:intergenic 30.0%
!!! AATTTGATGGCGTGTATTTT+TGG - Chr7:81967779-81967798 MsG0780040754.01.T01:intron 30.0%
!!! ATGGAAGAATTGTTTTGGTT+TGG + Chr7:81968108-81968127 None:intergenic 30.0%
!!! CTCTCTCTCTTATTTTCTTT+TGG + Chr7:81965065-81965084 None:intergenic 30.0%
!!! CTCTTATTTTCTTTTGGTTG+TGG + Chr7:81965059-81965078 None:intergenic 30.0%
!!! TTTATTTTTGTGTGTAACCC+GGG - Chr7:81966146-81966165 MsG0780040754.01.T01:intron 30.0%
AAATTCCAATCATTGCAGCA+AGG - Chr7:81965670-81965689 MsG0780040754.01.T01:intron 35.0%
AACAACACGTGACTAAGTTA+AGG + Chr7:81966650-81966669 None:intergenic 35.0%
AACAACTAGAGACAGAACAA+AGG + Chr7:81964940-81964959 None:intergenic 35.0%
ACAAACAGAGCAACTATATC+TGG - Chr7:81966825-81966844 MsG0780040754.01.T01:intron 35.0%
ACATAAAAACTCACCTTAGG+AGG + Chr7:81967011-81967030 None:intergenic 35.0%
ACCACATTGGCAAAATGATA+GGG + Chr7:81967038-81967057 None:intergenic 35.0%
ATATGGATTCTTGTGGAACA+TGG - Chr7:81968212-81968231 MsG0780040754.01.T01:CDS 35.0%
ATCAACACTGCTGTCTTTAA+CGG - Chr7:81965949-81965968 MsG0780040754.01.T01:CDS 35.0%
ATGAACCCCTTACACAAAAT+TGG + Chr7:81967540-81967559 None:intergenic 35.0%
ATTAGTTCCAAAGGTGATGA+TGG - Chr7:81968189-81968208 MsG0780040754.01.T01:CDS 35.0%
ATTCTTGTGGAACATGGATT+TGG - Chr7:81968218-81968237 MsG0780040754.01.T01:CDS 35.0%
CACAAATGAGGAAGTTCTTA+AGG - Chr7:81964582-81964601 MsG0780040754.01.T01:CDS 35.0%
CACTAGTATGTGGTAAGATT+TGG - Chr7:81966491-81966510 MsG0780040754.01.T01:intron 35.0%
CTCCAAATGGTATCAAAACA+GGG - Chr7:81966946-81966965 MsG0780040754.01.T01:intron 35.0%
CTGTTTCACGAGAATATTGA+AGG + Chr7:81968140-81968159 None:intergenic 35.0%
CTTGGATAAAATCGAAATCC+AGG + Chr7:81964523-81964542 None:intergenic 35.0%
CTTGGATGCAATAAGATTTG+AGG - Chr7:81968275-81968294 MsG0780040754.01.T01:CDS 35.0%
GAAGAAAATAGCCTAGAAGA+TGG - Chr7:81968240-81968259 MsG0780040754.01.T01:CDS 35.0%
GAATACCAACCTCAAAACAT+AGG - Chr7:81964867-81964886 MsG0780040754.01.T01:CDS 35.0%
GAATTGTTGTGTGTTGAGTT+TGG + Chr7:81967956-81967975 None:intergenic 35.0%
GAGATGATGACATCAAAGTT+AGG + Chr7:81968002-81968021 None:intergenic 35.0%
GAGCAACTATATCTGGATAT+TGG - Chr7:81966832-81966851 MsG0780040754.01.T01:intron 35.0%
GTACGAAAGACACAAACAAA+AGG + Chr7:81964837-81964856 None:intergenic 35.0%
GTCATATGTCTATTGTGTGT+TGG + Chr7:81966562-81966581 None:intergenic 35.0%
TAGCAAATACTTCCCTAACT+TGG - Chr7:81966420-81966439 MsG0780040754.01.T01:intron 35.0%
TATAGGAATAGAGCTCCAAA+TGG - Chr7:81966933-81966952 MsG0780040754.01.T01:intron 35.0%
TGTCATGAAACACTAGTATG+TGG - Chr7:81966481-81966500 MsG0780040754.01.T01:intron 35.0%
TTATCCAAGTGATGAGGAAT+TGG - Chr7:81964534-81964553 MsG0780040754.01.T01:CDS 35.0%
TTGTCAGATCAAGTTCATGA+AGG + Chr7:81964973-81964992 None:intergenic 35.0%
TTTCATGACATCAACCATAG+TGG + Chr7:81966471-81966490 None:intergenic 35.0%
! ATGGTATTTCTTTAGCTTCC+GGG - Chr7:81966776-81966795 MsG0780040754.01.T01:intron 35.0%
! GAAAGACATTGGTGTTCTAT+AGG - Chr7:81966916-81966935 MsG0780040754.01.T01:intron 35.0%
! GCTAATGCCAATTTTGTGTA+AGG - Chr7:81967530-81967549 MsG0780040754.01.T01:intron 35.0%
! TCGATTTTATCCAAGTGATG+AGG - Chr7:81964528-81964547 MsG0780040754.01.T01:CDS 35.0%
!! AATGATGAAGTGTTGTCATG+GGG + Chr7:81968080-81968099 None:intergenic 35.0%
!! ATGATGGATATGGATTCTTG+TGG - Chr7:81968205-81968224 MsG0780040754.01.T01:CDS 35.0%
!! CAAGTTTGTTATAGCCACTA+GGG + Chr7:81968044-81968063 None:intergenic 35.0%
!! TCAAGTTTGTTATAGCCACT+AGG + Chr7:81968045-81968064 None:intergenic 35.0%
!!! TTTTTTGAAGGGGCAATGAT+TGG + Chr7:81965647-81965666 None:intergenic 35.0%
AAAACGTAGTTGCACCACAT+TGG + Chr7:81967051-81967070 None:intergenic 40.0%
AAATAGCCTAGAAGATGGTG+TGG - Chr7:81968245-81968264 MsG0780040754.01.T01:CDS 40.0%
AAGTTTCAAGCCTCCAAGTT+AGG + Chr7:81966436-81966455 None:intergenic 40.0%
AATTACCAAACCATCCCTAG+TGG - Chr7:81968027-81968046 MsG0780040754.01.T01:intron 40.0%
ACCTTCACATATGTGAACCA+TGG - Chr7:81964623-81964642 MsG0780040754.01.T01:CDS 40.0%
AGTTTCAAGCCTCCAAGTTA+GGG + Chr7:81966435-81966454 None:intergenic 40.0%
ATTTCATGCATTGCATGCAG+AGG - Chr7:81966731-81966750 MsG0780040754.01.T01:intron 40.0%
CAAATACTTCCCTAACTTGG+AGG - Chr7:81966423-81966442 MsG0780040754.01.T01:intron 40.0%
CAAATGGTATCAAAACAGGG+TGG - Chr7:81966949-81966968 MsG0780040754.01.T01:intron 40.0%
CAATCACACAAGAGGTTGTA+GGG - Chr7:81966889-81966908 MsG0780040754.01.T01:intron 40.0%
CACCACATTGGCAAAATGAT+AGG + Chr7:81967039-81967058 None:intergenic 40.0%
CACGTGACTAAGTTAAGGTA+AGG + Chr7:81966645-81966664 None:intergenic 40.0%
CTGGATATTGGAAAGCAACT+GGG - Chr7:81966844-81966863 MsG0780040754.01.T01:intron 40.0%
GACTAAGTTAAGGTAAGGTC+AGG + Chr7:81966640-81966659 None:intergenic 40.0%
GATGACATCAAAGTTAGGGA+TGG + Chr7:81967997-81968016 None:intergenic 40.0%
GCTCCAAATGGTATCAAAAC+AGG - Chr7:81966945-81966964 MsG0780040754.01.T01:intron 40.0%
GGATAAAATCGAAATCCAGG+AGG + Chr7:81964520-81964539 None:intergenic 40.0%
GTCCCCTCATGATGAAATAT+AGG - Chr7:81966101-81966120 MsG0780040754.01.T01:intron 40.0%
GTGTCAAAAGAAGACGACTA+CGG + Chr7:81967643-81967662 None:intergenic 40.0%
GTTAGATCCAATCACACAAG+AGG - Chr7:81966881-81966900 MsG0780040754.01.T01:intron 40.0%
TAAAGGGATGGAAAGGTAAG+AGG - Chr7:81965111-81965130 MsG0780040754.01.T01:intron 40.0%
TCCATATCCATCATCACCTT+TGG + Chr7:81968199-81968218 None:intergenic 40.0%
TCTGGATATTGGAAAGCAAC+TGG - Chr7:81966843-81966862 MsG0780040754.01.T01:intron 40.0%
TGTAGGGATGAGAAAGACAT+TGG - Chr7:81966905-81966924 MsG0780040754.01.T01:intron 40.0%
TTGTGTAAGGGGTTCATAGT+TGG - Chr7:81967543-81967562 MsG0780040754.01.T01:intron 40.0%
! TTTGTTATAGCCACTAGGGA+TGG + Chr7:81968040-81968059 None:intergenic 40.0%
!! ATGATGAAGTGTTGTCATGG+GGG + Chr7:81968079-81968098 None:intergenic 40.0%
!! GGGATGGTTTGGTAATTTGT+TGG + Chr7:81968024-81968043 None:intergenic 40.0%
!! TCCAAAGGTGATGATGGATA+TGG - Chr7:81968195-81968214 MsG0780040754.01.T01:CDS 40.0%
!!! CACCCTGTTTTGATACCATT+TGG + Chr7:81966951-81966970 None:intergenic 40.0%
ACGACTACGGTTTACAACCA+CGG + Chr7:81967630-81967649 None:intergenic 45.0%
AGCAACTGGGAAAGATCGTA+TGG - Chr7:81966857-81966876 MsG0780040754.01.T01:intron 45.0%
CACACCAATTCCTCATCACT+TGG + Chr7:81964541-81964560 None:intergenic 45.0%
CCAATCACACAAGAGGTTGT+AGG - Chr7:81966888-81966907 MsG0780040754.01.T01:intron 45.0%
CCTACAACCTCTTGTGTGAT+TGG + Chr7:81966891-81966910 None:intergenic 45.0%
GACATCAAAGTTAGGGATGG+AGG + Chr7:81967994-81968013 None:intergenic 45.0%
GCCATGGTTCACATATGTGA+AGG + Chr7:81964627-81964646 None:intergenic 45.0%
GGAATCCTTGCTGCAATGAT+TGG + Chr7:81965678-81965697 None:intergenic 45.0%
GGATGGAAAGGTAAGAGGAA+GGG - Chr7:81965116-81965135 MsG0780040754.01.T01:intron 45.0%
TATAGCCACTAGGGATGGTT+TGG + Chr7:81968035-81968054 None:intergenic 45.0%
TATATACCTGGAAGCTGCCA+TGG + Chr7:81964643-81964662 None:intergenic 45.0%
TTGTTGATCACAGGAGGACT+GGG - Chr7:81967873-81967892 MsG0780040754.01.T01:intron 45.0%
TTTGTTGATCACAGGAGGAC+TGG - Chr7:81967872-81967891 MsG0780040754.01.T01:intron 45.0%
! GCCCTATCATTTTGCCAATG+TGG - Chr7:81967034-81967053 MsG0780040754.01.T01:intron 45.0%
! GTCATGAGCTTTGTAGCATG+AGG + Chr7:81965612-81965631 None:intergenic 45.0%
! GTCGTCTTCTTTTGACACGT+CGG - Chr7:81967645-81967664 MsG0780040754.01.T01:intron 45.0%
! TGTTCTTTGTTGCTTGACCG+TGG - Chr7:81967610-81967629 MsG0780040754.01.T01:intron 45.0%
!! ATAAGAAATTAATATAATAA+AGG + Chr7:81965831-81965850 None:intergenic 5.0%
!! TAAGAAATTAATATAATAAA+GGG + Chr7:81965830-81965849 None:intergenic 5.0%
!!! ATAAAAAAAAAAAATTTTGA+AGG - Chr7:81966221-81966240 MsG0780040754.01.T01:intron 5.0%
!!! TTCAAAATTTTTTTTTTTTA+TGG + Chr7:81966222-81966241 None:intergenic 5.0%
AGATGGTGTGGCTTCAGACT+TGG - Chr7:81968257-81968276 MsG0780040754.01.T01:CDS 50.0%
ATAGGAGCTTCACTACCTCC+TGG - Chr7:81964502-81964521 MsG0780040754.01.T01:CDS 50.0%
CAGTTGCATATTTGCGGTCC+CGG + Chr7:81966797-81966816 None:intergenic 50.0%
CCAATGCTCAGACAAGCAAG+CGG + Chr7:81967578-81967597 None:intergenic 50.0%
CTGAAGCCACACCATCTTCT+AGG + Chr7:81968254-81968273 None:intergenic 50.0%
GGGATGGAAAGGTAAGAGGA+AGG - Chr7:81965115-81965134 MsG0780040754.01.T01:intron 50.0%
TCATGCATTGCATGCAGAGG+TGG - Chr7:81966734-81966753 MsG0780040754.01.T01:intron 50.0%
!!! TGGCGTGTATTTTTGGCGTG+AGG - Chr7:81967786-81967805 MsG0780040754.01.T01:intron 50.0%
CCGCTTGCTTGTCTGAGCAT+TGG - Chr7:81967575-81967594 MsG0780040754.01.T01:intron 55.0%
CGGGACCGCAAATATGCAAC+TGG - Chr7:81966795-81966814 MsG0780040754.01.T01:intron 55.0%
GACACCACACATGCCTCCTA+AGG - Chr7:81966995-81967014 MsG0780040754.01.T01:intron 55.0%
TGTGAACCATGGCAGCTTCC+AGG - Chr7:81964634-81964653 MsG0780040754.01.T01:CDS 55.0%
! CTCACCTTAGGAGGCATGTG+TGG + Chr7:81967002-81967021 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr7 gene 81964487 81968326 81964487 ID=MsG0780040754.01;Name=MsG0780040754.01
Chr7 mRNA 81964487 81968326 81964487 ID=MsG0780040754.01.T01;Parent=MsG0780040754.01;Name=MsG0780040754.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|1|1|3|0|291
Chr7 exon 81968158 81968326 81968158 ID=MsG0780040754.01.T01:exon:38220;Parent=MsG0780040754.01.T01
Chr7 exon 81965797 81966062 81965797 ID=MsG0780040754.01.T01:exon:38219;Parent=MsG0780040754.01.T01
Chr7 exon 81964487 81964927 81964487 ID=MsG0780040754.01.T01:exon:38218;Parent=MsG0780040754.01.T01
Chr7 CDS 81968158 81968326 81968158 ID=MsG0780040754.01.T01:cds;Parent=MsG0780040754.01.T01
Chr7 CDS 81965797 81966062 81965797 ID=MsG0780040754.01.T01:cds;Parent=MsG0780040754.01.T01
Chr7 CDS 81964487 81964927 81964487 ID=MsG0780040754.01.T01:cds;Parent=MsG0780040754.01.T01
Gene Sequence

>MsG0780040754.01.T01

ATGGGTTTGAGAGACATAGGAGCTTCACTACCTCCTGGATTTCGATTTTATCCAAGTGATGAGGAATTGGTGTGTCACTATCTTTACAAAAAGATCACAAATGAGGAAGTTCTTAAGGGTACTTTGATTGAAATTGACCTTCACATATGTGAACCATGGCAGCTTCCAGAGGTGGCAAAGCTTAATGCAAATGAATGGTATTTCTTTAGCTTCCGGGACCGCAAATATGCAACTGGATTTAGAACAAACAGAGCAACTATATCTGGATATTGGAAAGCAACTGGGAAAGATCGTATGGTGTTAGATCCAATCACACAAGAGGTTGTAGGGATGAGAAAGACATTGGTGTTCTATAGGAATAGAGCTCCAAATGGTATCAAAACAGGGTGGATTATGCATGAATTTCGCTTAGAGACACCACACATGCCTCCTAAGGAGGACTGGGTATTGTGTAGAGTCTTTCACAAAAGCAAAGAAGAGAACAACAACAACAATAATAGTTCCAAACTCAACACACAACAATTCATGTATGAGACAACACCTCCATCCCTAACTTTGATGTCATCATCTCCAACAAATTACCAAACCATCCCTAGTGGCTATAACAAACTTGATTCTTTTTCTTCCCCCATGACAACACTTCATCATTTAAATCCAAACCAAAACAATTCTTCCATGATGAATCTCCTTCAATATTCTCGTGAAACAGATCCAAATAATAATAGCACGGTTACTCAAATTAGTTCCAAAGGTGATGATGGATATGGATTCTTGTGGAACATGGATTTGGAAGAAAATAGCCTAGAAGATGGTGTGGCTTCAGACTTGGATGCAATAAGATTTGAGGTTGATAATGATAATGTGGTCTTACTATAA
Protein sequence

>MsG0780040754.01.T01

MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEVLKGTLIEIDLHICEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATISGYWKATGKDRMVLDPITQEVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSKEENNNNNNSSKLNTQQFMYETTPPSLTLMSSSPTNYQTIPSGYNKLDSFSSPMTTLHHLNPNQNNSSMMNLLQYSRETDPNNNSTVTQISSKGDDGYGFLWNMDLEENSLEDGVASDLDAIRFEVDNDNVVLL*