AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780040933.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040933.01.T01 MTR_7g101280 93.820 178 11 0 1 178 87 264 2.61e-121 356
MsG0780040933.01.T01 MTR_0041s0110 93.820 178 11 0 1 178 87 264 2.61e-121 356
MsG0780040933.01.T01 MTR_7g101275 88.750 160 18 0 1 160 48 207 7.55e-103 301
MsG0780040933.01.T01 MTR_0041s0120 75.706 177 9 1 1 177 48 190 1.86e-92 275
MsG0780040933.01.T01 MTR_2g094570 61.364 176 63 2 1 176 67 237 3.25e-66 214
MsG0780040933.01.T01 MTR_2g094570 61.364 176 63 2 1 176 67 237 3.39e-66 214
MsG0780040933.01.T01 MTR_2g094570 61.364 176 63 2 1 176 123 293 7.43e-66 214
MsG0780040933.01.T01 MTR_1g094960 66.216 148 50 0 1 148 74 221 1.14e-64 209
MsG0780040933.01.T01 MTR_1g064430 67.320 153 42 2 1 148 83 232 5.84e-63 206
MsG0780040933.01.T01 MTR_1g064430 67.320 153 42 2 1 148 96 245 6.39e-63 206
MsG0780040933.01.T01 MTR_4g058930 58.889 180 70 3 1 177 66 244 1.59e-60 199
MsG0780040933.01.T01 MTR_4g058930 58.889 180 70 3 1 177 66 244 2.41e-60 199
MsG0780040933.01.T01 MTR_3g073420 54.667 150 61 2 1 148 76 220 7.58e-49 166
MsG0780040933.01.T01 MTR_8g101360 52.000 150 66 2 2 149 94 239 2.96e-46 162
MsG0780040933.01.T01 MTR_1g024025 51.351 148 69 1 2 149 106 250 6.99e-46 161
MsG0780040933.01.T01 MTR_4g124900 48.667 150 71 2 2 149 85 230 2.90e-44 156
MsG0780040933.01.T01 MTR_4g124900 48.667 150 71 2 2 149 85 230 3.09e-44 156
MsG0780040933.01.T01 MTR_2g043250 49.333 150 70 2 2 149 85 230 7.81e-44 155
MsG0780040933.01.T01 MTR_2g093740 49.057 159 73 2 1 151 116 274 4.02e-43 152
MsG0780040933.01.T01 MTR_2g093740 49.057 159 73 2 1 151 116 274 5.11e-43 152
MsG0780040933.01.T01 MTR_2g093740 49.057 159 73 2 1 151 116 274 5.57e-43 152
MsG0780040933.01.T01 MTR_2g018690 48.026 152 75 2 2 152 86 234 5.54e-42 149
MsG0780040933.01.T01 MTR_2g014770 48.684 152 71 1 2 146 108 259 1.10e-41 147
MsG0780040933.01.T01 MTR_5g061220 50.000 150 61 2 1 145 78 218 1.31e-41 146
MsG0780040933.01.T01 MTR_2g014770 48.684 152 71 1 2 146 108 259 1.41e-41 147
MsG0780040933.01.T01 MTR_2g005240 47.682 151 74 2 2 151 85 231 5.71e-41 146
MsG0780040933.01.T01 MTR_4g060460 48.428 159 74 1 1 151 114 272 1.08e-40 145
MsG0780040933.01.T01 MTR_4g060460 48.428 159 74 1 1 151 114 272 1.11e-40 145
MsG0780040933.01.T01 MTR_3g064050 48.366 153 73 3 2 152 89 237 1.90e-40 145
MsG0780040933.01.T01 MTR_5g076270 47.712 153 74 3 2 152 87 235 2.57e-40 145
MsG0780040933.01.T01 MTR_8g079492 46.980 149 73 2 2 148 3 147 6.94e-40 144
MsG0780040933.01.T01 MTR_8g079492 46.980 149 73 2 2 148 85 229 7.95e-40 143
MsG0780040933.01.T01 MTR_8g079492 46.980 149 73 2 2 148 85 229 8.10e-40 143
MsG0780040933.01.T01 MTR_4g088210 43.182 176 88 2 2 165 94 269 9.06e-40 143
MsG0780040933.01.T01 MTR_4g088210 43.182 176 88 2 2 165 94 269 9.18e-40 143
MsG0780040933.01.T01 MTR_2g093740 45.349 172 73 3 1 151 116 287 1.10e-39 142
MsG0780040933.01.T01 MTR_5g040880 46.753 154 69 3 1 148 70 216 1.22e-39 141
MsG0780040933.01.T01 MTR_2g093740 45.349 172 73 3 1 151 116 287 1.24e-39 142
MsG0780040933.01.T01 MTR_2g093740 45.349 172 73 3 1 151 116 287 1.24e-39 143
MsG0780040933.01.T01 MTR_2g024430 48.649 148 70 3 1 145 80 224 3.97e-39 139
MsG0780040933.01.T01 MTR_2g093740 60.748 107 42 0 45 151 38 144 6.78e-39 140
MsG0780040933.01.T01 MTR_2g093740 60.748 107 42 0 45 151 38 144 6.92e-39 140
MsG0780040933.01.T01 MTR_8g100050 45.238 168 85 4 2 166 121 284 7.51e-39 140
MsG0780040933.01.T01 MTR_4g021580 47.333 150 74 2 1 149 80 225 8.83e-39 139
MsG0780040933.01.T01 MTR_4g021580 47.333 150 74 2 1 149 80 225 1.09e-38 139
MsG0780040933.01.T01 MTR_8g100050 45.238 168 85 4 2 166 121 284 1.24e-38 140
MsG0780040933.01.T01 MTR_8g027440 46.711 152 76 2 1 151 90 237 1.69e-37 136
MsG0780040933.01.T01 MTR_7g062540 46.528 144 74 2 1 144 75 215 5.95e-37 135
MsG0780040933.01.T01 MTR_2g093740 54.167 120 42 1 45 151 38 157 1.63e-35 131
MsG0780040933.01.T01 MTR_2g093740 54.167 120 42 1 45 151 38 157 1.72e-35 130
MsG0780040933.01.T01 MTR_5g040740 45.513 156 69 3 1 147 71 219 4.22e-35 127
MsG0780040933.01.T01 MTR_5g082140 43.312 157 72 3 1 147 71 220 2.03e-32 120
MsG0780040933.01.T01 MTR_1g058210 41.892 148 78 2 1 145 71 213 3.82e-32 120
MsG0780040933.01.T01 MTR_2g006270 41.781 146 82 3 1 145 74 217 2.38e-31 117
MsG0780040933.01.T01 MTR_8g446900 38.411 151 89 1 1 151 22 168 3.97e-31 116
MsG0780040933.01.T01 MTR_5g062970 38.028 142 70 3 1 133 94 226 6.62e-26 99.8
MsG0780040933.01.T01 MTR_2g006380 37.838 148 85 5 1 145 81 224 1.12e-21 91.3
MsG0780040933.01.T01 MTR_5g060780 33.333 147 73 5 6 145 76 204 1.94e-17 79.0
MsG0780040933.01.T01 MTR_5g460920 33.333 147 73 5 6 145 76 204 3.60e-17 78.2
MsG0780040933.01.T01 MTR_5g060630 31.977 172 88 6 1 145 71 240 8.89e-16 74.7
MsG0780040933.01.T01 MTR_5g460740 31.977 172 88 6 1 145 71 240 8.89e-16 74.7
MsG0780040933.01.T01 MTR_5g061890 32.000 150 77 5 6 148 76 207 2.24e-15 73.2
MsG0780040933.01.T01 MTR_5g060770 33.577 137 76 5 6 140 22 145 1.66e-12 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780040933.01.T01 AT2G28350 63.636 154 50 1 1 148 65 218 8.72e-63 205
MsG0780040933.01.T01 AT2G28350 63.636 154 50 1 1 148 65 218 1.16e-62 205
MsG0780040933.01.T01 AT4G30080 59.524 168 59 3 1 159 74 241 8.63e-60 197
MsG0780040933.01.T01 AT1G77850 50.676 148 71 1 1 146 73 220 5.72e-46 159
MsG0780040933.01.T01 AT1G77850 50.676 148 71 1 1 146 73 220 6.39e-46 159
MsG0780040933.01.T01 AT1G19220 50.667 150 68 2 2 149 85 230 1.20e-44 157
MsG0780040933.01.T01 AT5G20730 49.007 151 71 2 2 150 86 232 9.96e-44 155
MsG0780040933.01.T01 AT5G20730 49.007 151 71 2 2 150 86 232 1.19e-43 154
MsG0780040933.01.T01 AT5G20730 49.007 151 71 2 2 150 86 232 1.19e-43 154
MsG0780040933.01.T01 AT1G19850 49.007 151 75 1 2 152 117 265 5.45e-43 152
MsG0780040933.01.T01 AT1G19850 49.007 151 75 1 2 152 106 254 5.72e-43 152
MsG0780040933.01.T01 AT1G30330 49.669 151 74 2 2 152 86 234 2.54e-41 148
MsG0780040933.01.T01 AT1G30330 49.669 151 74 2 2 152 88 236 2.54e-41 148
MsG0780040933.01.T01 AT1G30330 49.669 151 74 2 2 152 88 236 2.54e-41 148
MsG0780040933.01.T01 AT5G37020 47.712 153 74 3 2 152 85 233 3.59e-41 147
MsG0780040933.01.T01 AT5G60450 47.170 159 76 2 1 151 101 259 3.72e-41 147
MsG0780040933.01.T01 AT5G60450 47.170 159 76 2 1 151 125 283 4.03e-41 147
MsG0780040933.01.T01 AT5G37020 47.712 153 74 3 2 152 85 233 5.28e-41 147
MsG0780040933.01.T01 AT1G59750 50.000 150 72 3 2 151 84 230 1.41e-40 145
MsG0780040933.01.T01 AT1G59750 50.000 150 72 3 2 151 84 230 1.48e-40 145
MsG0780040933.01.T01 AT1G59750 50.000 150 72 3 2 151 84 230 1.72e-40 145
MsG0780040933.01.T01 AT1G59750 50.000 150 72 3 2 151 84 230 1.72e-40 145
MsG0780040933.01.T01 AT2G33860 45.455 154 77 1 2 148 109 262 7.86e-40 142
MsG0780040933.01.T01 AT3G61830 44.805 154 76 2 2 152 37 184 1.73e-38 138
MsG0780040933.01.T01 AT3G61830 44.805 154 76 2 2 152 88 235 3.07e-38 138
MsG0780040933.01.T01 AT5G62000 43.452 168 88 3 2 166 123 286 9.18e-38 137
MsG0780040933.01.T01 AT5G62000 43.452 168 88 3 2 166 123 286 9.18e-38 137
MsG0780040933.01.T01 AT5G62000 43.452 168 88 3 2 166 123 286 9.18e-38 137
MsG0780040933.01.T01 AT5G62000 43.452 168 88 3 2 166 123 286 9.18e-38 137
MsG0780040933.01.T01 AT5G62000 43.452 168 88 3 2 166 123 286 9.88e-38 137
MsG0780040933.01.T01 AT5G37020 54.630 108 49 0 45 152 31 138 1.72e-37 136
MsG0780040933.01.T01 AT4G23980 46.575 146 74 2 2 146 75 217 2.87e-37 135
MsG0780040933.01.T01 AT4G23980 46.575 146 74 2 2 146 75 217 3.04e-37 135
MsG0780040933.01.T01 AT2G33860 56.731 104 45 0 45 148 2 105 4.14e-37 133
MsG0780040933.01.T01 AT2G46530 41.420 169 89 3 2 166 84 246 6.55e-37 134
MsG0780040933.01.T01 AT2G46530 41.420 169 89 3 2 166 105 267 6.86e-37 134
MsG0780040933.01.T01 AT1G35520 44.295 149 77 2 2 150 89 231 4.37e-34 126
MsG0780040933.01.T01 AT1G35540 46.099 141 70 2 6 146 93 227 8.02e-34 125
MsG0780040933.01.T01 AT1G34310 43.448 145 76 1 6 150 93 231 3.57e-33 124
MsG0780040933.01.T01 AT1G35240 43.448 145 76 1 6 150 93 231 6.98e-33 123
MsG0780040933.01.T01 AT1G34410 43.709 151 75 2 2 150 89 231 1.16e-32 122
MsG0780040933.01.T01 AT2G46530 45.161 124 67 1 44 166 36 159 1.74e-32 121
MsG0780040933.01.T01 AT1G34390 44.138 145 73 2 2 146 89 225 6.66e-32 120
MsG0780040933.01.T01 AT1G34170 40.000 155 77 4 2 150 87 231 2.40e-28 110
MsG0780040933.01.T01 AT1G34170 40.000 155 77 4 2 150 87 231 2.87e-28 110
MsG0780040933.01.T01 AT1G34170 40.000 155 77 4 2 150 87 231 3.62e-28 110
MsG0780040933.01.T01 AT1G43950 39.568 139 75 4 6 144 93 222 3.34e-23 92.0
MsG0780040933.01.T01 AT2G46870 36.082 97 61 1 37 133 27 122 3.77e-13 66.6
MsG0780040933.01.T01 AT1G01030 34.545 110 66 2 40 144 51 159 3.13e-11 61.2
MsG0780040933.01.T01 AT3G25730 30.952 126 70 2 45 168 183 293 4.80e-11 60.5
MsG0780040933.01.T01 AT1G01030 34.545 110 66 2 40 144 51 159 4.83e-11 60.8
MsG0780040933.01.T01 AT4G01500 31.200 125 73 4 18 133 1 121 6.48e-11 60.1

Find 46 sgRNAs with CRISPR-Local

Find 53 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTGTCAGGGTGGAAATT+TGG 0.238329 7:-84445766 MsG0780040933.01.T01:CDS
CATCAACGTGTCTGAAATTA+AGG 0.241218 7:-84446136 MsG0780040933.01.T01:CDS
GCATTTCAGGCATGTTTATA+GGG 0.274751 7:-84445947 MsG0780040933.01.T01:CDS
GGCATTTCAGGCATGTTTAT+AGG 0.293252 7:-84445948 MsG0780040933.01.T01:CDS
ATGGTGAAAAGTGGCATTTC+AGG 0.316984 7:-84445960 MsG0780040933.01.T01:CDS
TGGAAATTTGGTAGTGGAAT+TGG 0.321491 7:-84445754 MsG0780040933.01.T01:CDS
TTGGAATTCGGAGGGCTAAA+AGG 0.363443 7:-84445810 MsG0780040933.01.T01:CDS
TTTGATAATGATGGTGTTGC+TGG 0.376636 7:-84446159 MsG0780040933.01.T01:CDS
AGTGACAAGAAACTTGCTTC+TGG 0.385156 7:-84445877 MsG0780040933.01.T01:CDS
CTAACTTGGTTAATATTCAT+AGG 0.385591 7:+84446183 None:intergenic
AAGAGGCATTTGTTGACAAC+TGG 0.392584 7:-84445916 MsG0780040933.01.T01:CDS
AGTTTCTTGTCACTGACATA+TGG 0.394738 7:+84445886 None:intergenic
GTTGGAGTCAATCCTTTGTC+AGG 0.400283 7:-84445778 MsG0780040933.01.T01:CDS
GTGAACTTAATGTTGGAATT+CGG 0.402297 7:-84445822 MsG0780040933.01.T01:CDS
GTGACAAGAAACTTGCTTCT+GGG 0.423889 7:-84445876 MsG0780040933.01.T01:CDS
CATCATTATCAAAACTAACT+TGG 0.449861 7:+84446169 None:intergenic
GTTGTCAACAAATGCCTCTT+CGG 0.456311 7:+84445919 None:intergenic
ATTTGTCCTGCACCACCTTA+CGG 0.476461 7:-84445730 MsG0780040933.01.T01:CDS
GAAAACAGTGAACTTAATGT+TGG 0.494744 7:-84445829 MsG0780040933.01.T01:CDS
TCAGGGTGGAAATTTGGTAG+TGG 0.505938 7:-84445760 MsG0780040933.01.T01:CDS
TTGGGATAGATGTCCTGAAA+AGG 0.529804 7:+84445991 None:intergenic
AATCCTCCGTAAGGTGGTGC+AGG 0.533772 7:+84445724 None:intergenic
TGACAAGAAACTTGCTTCTG+GGG 0.545499 7:-84445875 MsG0780040933.01.T01:CDS
CCAAATTTCCACCCTGACAA+AGG 0.546733 7:+84445766 None:intergenic
GCTAAAAGGCGAAATAATGT+TGG 0.555377 7:-84445796 MsG0780040933.01.T01:CDS
CATTTCAGGCATGTTTATAG+GGG 0.556177 7:-84445946 MsG0780040933.01.T01:CDS
AACTATGGAAATCCTCCGTA+AGG 0.559080 7:+84445715 None:intergenic
AGCGTTTCGGCACAATATCT+AGG 0.559188 7:+84446045 None:intergenic
GGCATTTGTTGACAACTGGA+TGG 0.569244 7:-84445912 MsG0780040933.01.T01:CDS
AACTTAATGTTGGAATTCGG+AGG 0.572730 7:-84445819 MsG0780040933.01.T01:CDS
AGGATGTACATGGTGAAAAG+TGG 0.579569 7:-84445969 MsG0780040933.01.T01:CDS
TCTGATGCAAACACTGGTGG+TGG 0.592766 7:-84446078 MsG0780040933.01.T01:CDS
ATCTATCCCAAGGATGTACA+TGG 0.592936 7:-84445979 MsG0780040933.01.T01:CDS
GGATAGATGTCCTGAAAAGG+AGG 0.594077 7:+84445994 None:intergenic
TTGGAGTCAATCCTTTGTCA+GGG 0.598239 7:-84445777 MsG0780040933.01.T01:CDS
ATGAAGTGTATGCAAAACTC+AGG 0.607388 7:-84446212 MsG0780040933.01.T01:CDS
TTTATAGGGGCACGCCGAAG+AGG 0.616360 7:-84445933 MsG0780040933.01.T01:CDS
GTTTGCATCAGATTGTGTCA+AGG 0.616878 7:+84446089 None:intergenic
ACACAATCTGATGCAAACAC+TGG 0.627018 7:-84446084 MsG0780040933.01.T01:CDS
ACTTAATGTTGGAATTCGGA+GGG 0.629032 7:-84445818 MsG0780040933.01.T01:CDS
TATGGAAATCCTCCGTAAGG+TGG 0.634599 7:+84445718 None:intergenic
GAGTCAATCCTTTGTCAGGG+TGG 0.657457 7:-84445774 MsG0780040933.01.T01:CDS
TGTCCTGCACCACCTTACGG+AGG 0.685773 7:-84445727 MsG0780040933.01.T01:CDS
GATAGATGTCCTGAAAAGGA+GGG 0.691897 7:+84445995 None:intergenic
CAATCTGATGCAAACACTGG+TGG 0.725224 7:-84446081 MsG0780040933.01.T01:CDS
TTAGCTGAATAGTCCAAACG+AGG 0.756003 7:+84446018 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! CATCATTATCAAAACTAACT+TGG + Chr7:84445782-84445801 None:intergenic 25.0%
! CTAACTTGGTTAATATTCAT+AGG + Chr7:84445768-84445787 None:intergenic 25.0%
!!! CAAGTTAGTTTTGATAATGA+TGG - Chr7:84445780-84445799 MsG0780040933.01.T01:CDS 25.0%
GAAAACAGTGAACTTAATGT+TGG - Chr7:84446119-84446138 MsG0780040933.01.T01:CDS 30.0%
GTGAACTTAATGTTGGAATT+CGG - Chr7:84446126-84446145 MsG0780040933.01.T01:CDS 30.0%
AACTTAATGTTGGAATTCGG+AGG - Chr7:84446129-84446148 MsG0780040933.01.T01:CDS 35.0%
ACTTAATGTTGGAATTCGGA+GGG - Chr7:84446130-84446149 MsG0780040933.01.T01:CDS 35.0%
AGTTTCTTGTCACTGACATA+TGG + Chr7:84446065-84446084 None:intergenic 35.0%
ATGAAGTGTATGCAAAACTC+AGG - Chr7:84445736-84445755 MsG0780040933.01.T01:CDS 35.0%
CATTTCAGGCATGTTTATAG+GGG - Chr7:84446002-84446021 MsG0780040933.01.T01:CDS 35.0%
GCATTTCAGGCATGTTTATA+GGG - Chr7:84446001-84446020 MsG0780040933.01.T01:CDS 35.0%
GCTAAAAGGCGAAATAATGT+TGG - Chr7:84446152-84446171 MsG0780040933.01.T01:CDS 35.0%
! CATCAACGTGTCTGAAATTA+AGG - Chr7:84445812-84445831 MsG0780040933.01.T01:CDS 35.0%
! GAGTTTTGCATACACTTCAT+CGG + Chr7:84445736-84445755 None:intergenic 35.0%
! TTTTCACCATGTACATCCTT+GGG + Chr7:84445978-84445997 None:intergenic 35.0%
!! TGGAAATTTGGTAGTGGAAT+TGG - Chr7:84446194-84446213 MsG0780040933.01.T01:CDS 35.0%
!! TTTGATAATGATGGTGTTGC+TGG - Chr7:84445789-84445808 MsG0780040933.01.T01:CDS 35.0%
ACACAATCTGATGCAAACAC+TGG - Chr7:84445864-84445883 MsG0780040933.01.T01:CDS 40.0%
AGGATGTACATGGTGAAAAG+TGG - Chr7:84445979-84445998 MsG0780040933.01.T01:CDS 40.0%
ATCTATCCCAAGGATGTACA+TGG - Chr7:84445969-84445988 MsG0780040933.01.T01:CDS 40.0%
ATGGTGAAAAGTGGCATTTC+AGG - Chr7:84445988-84446007 MsG0780040933.01.T01:CDS 40.0%
GATAGATGTCCTGAAAAGGA+GGG + Chr7:84445956-84445975 None:intergenic 40.0%
GGCATTTCAGGCATGTTTAT+AGG - Chr7:84446000-84446019 MsG0780040933.01.T01:CDS 40.0%
GTTGTCAACAAATGCCTCTT+CGG + Chr7:84446032-84446051 None:intergenic 40.0%
GTTTGCATCAGATTGTGTCA+AGG + Chr7:84445862-84445881 None:intergenic 40.0%
TTAGCTGAATAGTCCAAACG+AGG + Chr7:84445933-84445952 None:intergenic 40.0%
TTGGAGTCAATCCTTTGTCA+GGG - Chr7:84446171-84446190 MsG0780040933.01.T01:CDS 40.0%
TTGGGATAGATGTCCTGAAA+AGG + Chr7:84445960-84445979 None:intergenic 40.0%
! AGTGACAAGAAACTTGCTTC+TGG - Chr7:84446071-84446090 MsG0780040933.01.T01:CDS 40.0%
! CTTTTCACCATGTACATCCT+TGG + Chr7:84445979-84445998 None:intergenic 40.0%
! GTGACAAGAAACTTGCTTCT+GGG - Chr7:84446072-84446091 MsG0780040933.01.T01:CDS 40.0%
! TGACAAGAAACTTGCTTCTG+GGG - Chr7:84446073-84446092 MsG0780040933.01.T01:CDS 40.0%
!! AAGAGGCATTTGTTGACAAC+TGG - Chr7:84446032-84446051 MsG0780040933.01.T01:CDS 40.0%
!! CAAACGAGGAAAAAGCGTTT+CGG + Chr7:84445919-84445938 None:intergenic 40.0%
!! TTTTCAGGACATCTATCCCA+AGG - Chr7:84445959-84445978 MsG0780040933.01.T01:CDS 40.0%
AGCGTTTCGGCACAATATCT+AGG + Chr7:84445906-84445925 None:intergenic 45.0%
ATTTGTCCTGCACCACCTTA+CGG - Chr7:84446218-84446237 MsG0780040933.01.T01:CDS 45.0%
CAATCTGATGCAAACACTGG+TGG - Chr7:84445867-84445886 MsG0780040933.01.T01:CDS 45.0%
CCAAATTTCCACCCTGACAA+AGG + Chr7:84446185-84446204 None:intergenic 45.0%
CCTTTGTCAGGGTGGAAATT+TGG - Chr7:84446182-84446201 MsG0780040933.01.T01:CDS 45.0%
GGATAGATGTCCTGAAAAGG+AGG + Chr7:84445957-84445976 None:intergenic 45.0%
GTTGGAGTCAATCCTTTGTC+AGG - Chr7:84446170-84446189 MsG0780040933.01.T01:CDS 45.0%
TATGGAAATCCTCCGTAAGG+TGG + Chr7:84446233-84446252 None:intergenic 45.0%
TCAGGGTGGAAATTTGGTAG+TGG - Chr7:84446188-84446207 MsG0780040933.01.T01:CDS 45.0%
TTGGAATTCGGAGGGCTAAA+AGG - Chr7:84446138-84446157 MsG0780040933.01.T01:CDS 45.0%
! GGCATTTGTTGACAACTGGA+TGG - Chr7:84446036-84446055 MsG0780040933.01.T01:CDS 45.0%
! TTCAGCTAACCCTCCTTTTC+AGG - Chr7:84445944-84445963 MsG0780040933.01.T01:CDS 45.0%
!!! CGAAACGCTTTTTCCTCGTT+TGG - Chr7:84445917-84445936 MsG0780040933.01.T01:CDS 45.0%
GAGTCAATCCTTTGTCAGGG+TGG - Chr7:84446174-84446193 MsG0780040933.01.T01:CDS 50.0%
TCTGATGCAAACACTGGTGG+TGG - Chr7:84445870-84445889 MsG0780040933.01.T01:CDS 50.0%
AATCCTCCGTAAGGTGGTGC+AGG + Chr7:84446227-84446246 None:intergenic 55.0%
! TTTATAGGGGCACGCCGAAG+AGG - Chr7:84446015-84446034 MsG0780040933.01.T01:CDS 55.0%
TGTCCTGCACCACCTTACGG+AGG - Chr7:84446221-84446240 MsG0780040933.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 84445717 84446253 84445717 ID=MsG0780040933.01;Name=MsG0780040933.01
Chr7 mRNA 84445717 84446253 84445717 ID=MsG0780040933.01.T01;Parent=MsG0780040933.01;Name=MsG0780040933.01.T01;_AED=0.38;_eAED=0.38;_QI=0|-1|0|1|-1|1|1|0|178
Chr7 exon 84445717 84446253 84445717 ID=MsG0780040933.01.T01:exon:11590;Parent=MsG0780040933.01.T01
Chr7 CDS 84445717 84446253 84445717 ID=MsG0780040933.01.T01:cds;Parent=MsG0780040933.01.T01
Gene Sequence

>MsG0780040933.01.T01

ATGGCTAATCATGAGACCGATGAAGTGTATGCAAAACTCAGGCTTGTTCCTATGAATATTAACCAAGTTAGTTTTGATAATGATGGTGTTGCTGGCATCAACGTGTCTGAAATTAAGGATAAACATCAATCTTTTGCGAAAACCTTGACACAATCTGATGCAAACACTGGTGGTGGCTTTTCTTGTCCTAGATATTGTGCCGAAACGCTTTTTCCTCGTTTGGACTATTCAGCTAACCCTCCTTTTCAGGACATCTATCCCAAGGATGTACATGGTGAAAAGTGGCATTTCAGGCATGTTTATAGGGGCACGCCGAAGAGGCATTTGTTGACAACTGGATGGAGTCCATATGTCAGTGACAAGAAACTTGCTTCTGGGGATTCAATTGTGTTTTTGAGATCTGAAAACAGTGAACTTAATGTTGGAATTCGGAGGGCTAAAAGGCGAAATAATGTTGGAGTCAATCCTTTGTCAGGGTGGAAATTTGGTAGTGGAATTGGAATTTGTCCTGCACCACCTTACGGAGGATTTCCATAG
Protein sequence

>MsG0780040933.01.T01

MANHETDEVYAKLRLVPMNINQVSFDNDGVAGINVSEIKDKHQSFAKTLTQSDANTGGGFSCPRYCAETLFPRLDYSANPPFQDIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPYVSDKKLASGDSIVFLRSENSELNVGIRRAKRRNNVGVNPLSGWKFGSGIGICPAPPYGGFP*