Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041038.01.T01 | XP_003625742.1 | 98.75 | 160 | 2 | 0 | 1 | 160 | 35 | 194 | 8.53E-112 | 326 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041038.01.T01 | Q1G3Q4 | 45.714 | 105 | 53 | 2 | 3 | 107 | 36 | 136 | 4.82E-24 | 97.4 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041038.01.T01 | G7L4Z3 | 98.750 | 160 | 2 | 0 | 1 | 160 | 35 | 194 | 4.07e-112 | 326 |
Gene ID | Type | Classification |
---|---|---|
MsG0780041038.01.T01 | TF | PLATZ |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041038.01.T01 | MTR_7g102790 | 98.750 | 160 | 2 | 0 | 1 | 160 | 35 | 194 | 1.03e-115 | 326 |
MsG0780041038.01.T01 | MTR_1g062160 | 75.776 | 161 | 36 | 2 | 1 | 160 | 35 | 193 | 5.59e-82 | 241 |
MsG0780041038.01.T01 | MTR_5g007230 | 55.901 | 161 | 63 | 3 | 1 | 161 | 49 | 201 | 1.77e-53 | 169 |
MsG0780041038.01.T01 | MTR_5g030130 | 54.819 | 166 | 60 | 4 | 1 | 160 | 63 | 219 | 2.58e-52 | 167 |
MsG0780041038.01.T01 | MTR_4g078170 | 53.049 | 164 | 64 | 5 | 1 | 160 | 43 | 197 | 5.80e-51 | 162 |
MsG0780041038.01.T01 | MTR_8g066820 | 56.364 | 165 | 59 | 5 | 1 | 160 | 61 | 217 | 9.26e-51 | 163 |
MsG0780041038.01.T01 | MTR_5g030130 | 72.549 | 102 | 25 | 2 | 1 | 102 | 63 | 161 | 1.31e-46 | 150 |
MsG0780041038.01.T01 | MTR_2g084495 | 44.138 | 145 | 65 | 5 | 1 | 133 | 33 | 173 | 2.65e-30 | 110 |
MsG0780041038.01.T01 | MTR_2g084510 | 49.138 | 116 | 49 | 3 | 2 | 109 | 33 | 146 | 1.08e-28 | 106 |
MsG0780041038.01.T01 | MTR_2g060540 | 51.852 | 108 | 42 | 4 | 2 | 101 | 40 | 145 | 1.02e-27 | 101 |
MsG0780041038.01.T01 | MTR_2g084525 | 49.138 | 116 | 49 | 3 | 2 | 109 | 34 | 147 | 1.33e-27 | 103 |
MsG0780041038.01.T01 | MTR_2g060500 | 51.852 | 108 | 42 | 4 | 2 | 101 | 40 | 145 | 1.67e-27 | 100 |
MsG0780041038.01.T01 | MTR_4g116300 | 42.453 | 106 | 57 | 1 | 3 | 108 | 36 | 137 | 3.96e-24 | 95.1 |
MsG0780041038.01.T01 | MTR_2g055210 | 42.991 | 107 | 56 | 3 | 1 | 107 | 130 | 231 | 9.91e-24 | 95.5 |
MsG0780041038.01.T01 | MTR_4g094680 | 40.566 | 106 | 56 | 2 | 12 | 111 | 58 | 162 | 7.95e-21 | 85.9 |
MsG0780041038.01.T01 | MTR_2g036170 | 33.544 | 158 | 84 | 5 | 1 | 148 | 65 | 211 | 2.38e-16 | 74.3 |
MsG0780041038.01.T01 | MTR_8g097310 | 36.634 | 101 | 61 | 2 | 14 | 111 | 4 | 104 | 2.57e-14 | 67.0 |
MsG0780041038.01.T01 | MTR_8g105930 | 35.385 | 130 | 59 | 5 | 1 | 109 | 40 | 165 | 3.61e-14 | 68.2 |
MsG0780041038.01.T01 | MTR_1g032880 | 40.000 | 85 | 46 | 3 | 22 | 102 | 27 | 110 | 3.12e-12 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0780041038.01.T01 | AT1G32700 | 52.761 | 163 | 66 | 4 | 1 | 161 | 1 | 154 | 3.31e-50 | 159 |
MsG0780041038.01.T01 | AT1G32700 | 52.761 | 163 | 66 | 4 | 1 | 161 | 40 | 193 | 9.50e-50 | 159 |
MsG0780041038.01.T01 | AT1G76590 | 63.492 | 126 | 42 | 3 | 1 | 126 | 46 | 167 | 5.82e-49 | 159 |
MsG0780041038.01.T01 | AT1G21000 | 64.463 | 121 | 37 | 4 | 1 | 119 | 41 | 157 | 2.34e-47 | 154 |
MsG0780041038.01.T01 | AT1G21000 | 64.463 | 121 | 37 | 4 | 1 | 119 | 44 | 160 | 3.03e-47 | 154 |
MsG0780041038.01.T01 | AT2G27930 | 67.857 | 112 | 25 | 2 | 1 | 103 | 32 | 141 | 4.28e-47 | 152 |
MsG0780041038.01.T01 | AT2G27930 | 67.857 | 112 | 25 | 2 | 1 | 103 | 32 | 141 | 4.28e-47 | 152 |
MsG0780041038.01.T01 | AT4G17900 | 55.921 | 152 | 56 | 5 | 1 | 150 | 48 | 190 | 8.30e-47 | 152 |
MsG0780041038.01.T01 | AT4G17900 | 55.921 | 152 | 56 | 5 | 1 | 150 | 62 | 204 | 8.66e-47 | 152 |
MsG0780041038.01.T01 | AT2G27930 | 67.568 | 111 | 25 | 2 | 1 | 102 | 32 | 140 | 1.56e-46 | 150 |
MsG0780041038.01.T01 | AT2G27930 | 67.568 | 111 | 25 | 2 | 1 | 102 | 32 | 140 | 1.56e-46 | 150 |
MsG0780041038.01.T01 | AT1G43000 | 59.130 | 115 | 44 | 2 | 1 | 115 | 37 | 148 | 7.58e-42 | 139 |
MsG0780041038.01.T01 | AT1G43000 | 57.377 | 122 | 47 | 3 | 1 | 120 | 44 | 162 | 7.99e-42 | 140 |
MsG0780041038.01.T01 | AT5G46710 | 45.509 | 167 | 73 | 5 | 1 | 158 | 40 | 197 | 3.20e-37 | 127 |
MsG0780041038.01.T01 | AT5G46710 | 45.509 | 167 | 73 | 5 | 1 | 158 | 56 | 213 | 4.43e-37 | 127 |
MsG0780041038.01.T01 | AT5G46710 | 59.615 | 104 | 38 | 3 | 1 | 103 | 56 | 156 | 7.01e-36 | 123 |
MsG0780041038.01.T01 | AT2G27930 | 69.048 | 84 | 17 | 1 | 29 | 103 | 61 | 144 | 1.45e-33 | 117 |
MsG0780041038.01.T01 | AT2G27930 | 69.048 | 84 | 17 | 1 | 29 | 103 | 61 | 144 | 1.45e-33 | 117 |
MsG0780041038.01.T01 | AT2G12646 | 45.714 | 105 | 53 | 2 | 3 | 107 | 33 | 133 | 4.59e-25 | 97.4 |
MsG0780041038.01.T01 | AT2G12646 | 45.714 | 105 | 53 | 2 | 3 | 107 | 36 | 136 | 4.91e-25 | 97.4 |
MsG0780041038.01.T01 | AT2G12646 | 45.714 | 105 | 53 | 2 | 3 | 107 | 36 | 136 | 4.91e-25 | 97.4 |
MsG0780041038.01.T01 | AT1G31040 | 37.931 | 145 | 82 | 5 | 1 | 143 | 47 | 185 | 1.10e-22 | 90.9 |
MsG0780041038.01.T01 | AT3G60670 | 34.177 | 158 | 87 | 5 | 1 | 145 | 35 | 188 | 6.67e-22 | 89.0 |
MsG0780041038.01.T01 | AT2G01818 | 31.915 | 141 | 90 | 2 | 1 | 135 | 39 | 179 | 3.19e-14 | 68.2 |
Find 34 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCATTTCGGTTCTGTTCTT+TGG | 0.140972 | 7:-85758130 | MsG0780041038.01.T01:CDS |
GCTACTCCTTTCCCAGATTT+TGG | 0.169958 | 7:+85758189 | None:intergenic |
TCATTTCGGTTCTGTTCTTT+GGG | 0.297486 | 7:-85758129 | MsG0780041038.01.T01:CDS |
TATACCTCATAGGCACCTTT+TGG | 0.333358 | 7:-85756925 | MsG0780041038.01.T01:CDS |
GTTAGGCCTCAACCAAAATC+TGG | 0.351742 | 7:-85758201 | MsG0780041038.01.T01:CDS |
CAAAGACCATCAAGTCATTC+AGG | 0.358735 | 7:-85758609 | MsG0780041038.01.T01:intron |
TGCATACCTGAATGACTTGA+TGG | 0.388408 | 7:+85758603 | None:intergenic |
TGGAGATGCAAGCTTTGCTT+TGG | 0.396373 | 7:-85757083 | MsG0780041038.01.T01:CDS |
GGAGCTTGTTGGATTCATTT+CGG | 0.401131 | 7:-85758143 | MsG0780041038.01.T01:CDS |
GTTCTGTTCTTTGGGATGTA+AGG | 0.410147 | 7:-85758121 | MsG0780041038.01.T01:intron |
CAGAAAGTGTTGGACATTAG+TGG | 0.416506 | 7:-85758270 | MsG0780041038.01.T01:CDS |
GAAGAAAAGGTATACCTCAT+AGG | 0.437551 | 7:-85756935 | MsG0780041038.01.T01:CDS |
GGAGGTGGAGGAGGCGTGAG+AGG | 0.445087 | 7:+85756971 | None:intergenic |
TTTAAATGCAAGAGAAGAAA+AGG | 0.456024 | 7:-85756948 | MsG0780041038.01.T01:CDS |
GCTCACATTTGTGAGATTTG+TGG | 0.456800 | 7:-85758168 | MsG0780041038.01.T01:CDS |
TCTCTTGCATTTAAAGGAGG+TGG | 0.457570 | 7:+85756956 | None:intergenic |
AGATGCAAGCTTTGCTTTGG+AGG | 0.464996 | 7:-85757080 | MsG0780041038.01.T01:CDS |
GCTTTGGAGGGTAAGAATGA+AGG | 0.469335 | 7:-85757067 | MsG0780041038.01.T01:CDS |
GCATTTAAAGGAGGTGGAGG+AGG | 0.494494 | 7:+85756962 | None:intergenic |
CTTGCATTTAAAGGAGGTGG+AGG | 0.512442 | 7:+85756959 | None:intergenic |
AATGAAGGATTGACAATGGA+AGG | 0.518953 | 7:-85757052 | MsG0780041038.01.T01:CDS |
GATGCAAGCTTTGCTTTGGA+GGG | 0.525049 | 7:-85757079 | MsG0780041038.01.T01:CDS |
GATTTGTGGAAGGAGCTTGT+TGG | 0.527361 | 7:-85758154 | MsG0780041038.01.T01:CDS |
TCTTCTCTTGCATTTAAAGG+AGG | 0.530269 | 7:+85756953 | None:intergenic |
AGAACCAAAAGGTGCCTATG+AGG | 0.549180 | 7:+85756921 | None:intergenic |
TTAGGCCTCAACCAAAATCT+GGG | 0.556600 | 7:-85758200 | MsG0780041038.01.T01:CDS |
TATTGTTTAGATTGCAACAA+TGG | 0.560088 | 7:-85758671 | MsG0780041038.01.T01:CDS |
TAAGAATGAAGGATTGACAA+TGG | 0.573703 | 7:-85757056 | MsG0780041038.01.T01:CDS |
CCATTAGAATGAGAACCAAA+AGG | 0.579133 | 7:+85756910 | None:intergenic |
GTCAGAGATTCAGAAAGTGT+TGG | 0.588527 | 7:-85758280 | MsG0780041038.01.T01:CDS |
CCTCAACCAAAATCTGGGAA+AGG | 0.603599 | 7:-85758195 | MsG0780041038.01.T01:CDS |
TTAGATTGCAACAATGGTGA+TGG | 0.620304 | 7:-85758665 | MsG0780041038.01.T01:CDS |
ACATTTGTGAGATTTGTGGA+AGG | 0.623549 | 7:-85758164 | MsG0780041038.01.T01:CDS |
TCAGAAGAAGAATTGCGTGA+AGG | 0.679765 | 7:-85757013 | MsG0780041038.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAACTATATTTAGATAA+AGG | + | Chr7:85758146-85758165 | None:intergenic | 10.0% |
!! | TAAATATTCATATATGAAAT+GGG | + | Chr7:85757084-85757103 | None:intergenic | 10.0% |
!! | TTAAACTATATTTAGATAAA+GGG | + | Chr7:85758145-85758164 | None:intergenic | 10.0% |
!! | TTAAATATTCATATATGAAA+TGG | + | Chr7:85757085-85757104 | None:intergenic | 10.0% |
!!! | ATATGAATATTTAATTTTCT+GGG | - | Chr7:85757091-85757110 | MsG0780041038.01.T01:CDS | 10.0% |
!!! | TAATAATATTCTCTTTTTTA+CGG | - | Chr7:85757798-85757817 | MsG0780041038.01.T01:intron | 10.0% |
!!! | TATATGAATATTTAATTTTC+TGG | - | Chr7:85757090-85757109 | MsG0780041038.01.T01:CDS | 10.0% |
!! | GATAATATGTAATATTTGAT+TGG | - | Chr7:85758079-85758098 | MsG0780041038.01.T01:intron | 15.0% |
!! | TTTGTTTATCTATCATAATT+AGG | - | Chr7:85757899-85757918 | MsG0780041038.01.T01:intron | 15.0% |
!!! | ATTATGAGTTTTTATAAACA+TGG | - | Chr7:85757832-85757851 | MsG0780041038.01.T01:intron | 15.0% |
!!! | TGATAATGTACAAAATTTAT+TGG | + | Chr7:85757989-85758008 | None:intergenic | 15.0% |
!!! | TTATGAGTTTTTATAAACAT+GGG | - | Chr7:85757833-85757852 | MsG0780041038.01.T01:intron | 15.0% |
!!! | TTTTTTATTAATGTATTTGG+TGG | - | Chr7:85757117-85757136 | MsG0780041038.01.T01:intron | 15.0% |
!! | AAAAAGAAAACTCAAAATGT+AGG | + | Chr7:85757874-85757893 | None:intergenic | 20.0% |
!! | ATAATTATGATGTTGAATGA+TGG | + | Chr7:85757683-85757702 | None:intergenic | 20.0% |
!! | CTTGAAAGAATAAAGAAAAA+TGG | - | Chr7:85758484-85758503 | MsG0780041038.01.T01:intron | 20.0% |
!! | GTAAAAATGATTTACAAAGT+CGG | - | Chr7:85758110-85758129 | MsG0780041038.01.T01:intron | 20.0% |
!! | TGATGTATAATGTAATGTAA+TGG | - | Chr7:85757166-85757185 | MsG0780041038.01.T01:intron | 20.0% |
!!! | ATTTAATTTATATACCACGT+TGG | + | Chr7:85758335-85758354 | None:intergenic | 20.0% |
!!! | TATGAGTTTTTATAAACATG+GGG | - | Chr7:85757834-85757853 | MsG0780041038.01.T01:intron | 20.0% |
!!! | TGAAAAATAATATGATGATG+TGG | - | Chr7:85758057-85758076 | MsG0780041038.01.T01:intron | 20.0% |
! | ACTCAATTATACTCATCATA+TGG | - | Chr7:85757607-85757626 | MsG0780041038.01.T01:intron | 25.0% |
! | CTCAATTATACTCATCATAT+GGG | - | Chr7:85757608-85757627 | MsG0780041038.01.T01:intron | 25.0% |
! | GCATGTCATATACAAATAAT+TGG | - | Chr7:85758404-85758423 | MsG0780041038.01.T01:intron | 25.0% |
! | GGTAAATGTACTAATTATGA+AGG | + | Chr7:85757734-85757753 | None:intergenic | 25.0% |
! | GTAATTAATCGAAATGTGAA+TGG | + | Chr7:85757755-85757774 | None:intergenic | 25.0% |
! | TATTGTTTAGATTGCAACAA+TGG | - | Chr7:85756916-85756935 | MsG0780041038.01.T01:CDS | 25.0% |
! | TCTATCATAATTAGGACATT+TGG | - | Chr7:85757907-85757926 | MsG0780041038.01.T01:intron | 25.0% |
! | TGTATAATGTAATGTAATGG+TGG | - | Chr7:85757169-85757188 | MsG0780041038.01.T01:intron | 25.0% |
! | TTTAAATGCAAGAGAAGAAA+AGG | - | Chr7:85758639-85758658 | MsG0780041038.01.T01:CDS | 25.0% |
! | TTTCTTTATTGAAAACCCAA+CGG | - | Chr7:85757023-85757042 | MsG0780041038.01.T01:CDS | 25.0% |
!! | ATTAATGTATTTGGTGGAAT+GGG | - | Chr7:85757123-85757142 | MsG0780041038.01.T01:intron | 25.0% |
!! | TATTAATGTATTTGGTGGAA+TGG | - | Chr7:85757122-85757141 | MsG0780041038.01.T01:intron | 25.0% |
!! | TTTTCTTCTCTTGCATTTAA+AGG | + | Chr7:85758640-85758659 | None:intergenic | 25.0% |
!!! | GATTTGTTTGTTGTTTTTGT+TGG | - | Chr7:85757241-85757260 | MsG0780041038.01.T01:intron | 25.0% |
AAAATCACAATGCGTCAATT+AGG | + | Chr7:85757936-85757955 | None:intergenic | 30.0% | |
ATGATGAAAATTAAAAGCGG+TGG | + | Chr7:85757710-85757729 | None:intergenic | 30.0% | |
CAGAAACTATGAGATTTGAT+TGG | + | Chr7:85758013-85758032 | None:intergenic | 30.0% | |
GCATTGCAGATTCAAAAAAT+GGG | - | Chr7:85757056-85757075 | MsG0780041038.01.T01:CDS | 30.0% | |
GGCATGATGAAAATTAAAAG+CGG | + | Chr7:85757713-85757732 | None:intergenic | 30.0% | |
TAAGAATGAAGGATTGACAA+TGG | - | Chr7:85758531-85758550 | MsG0780041038.01.T01:intron | 30.0% | |
TGATGAAAATTAAAAGCGGT+GGG | + | Chr7:85757709-85757728 | None:intergenic | 30.0% | |
! | AAATGTAGGTGATGATGTAT+GGG | + | Chr7:85757648-85757667 | None:intergenic | 30.0% |
!! | GTTGATAATGATATGGACAT+TGG | + | Chr7:85757571-85757590 | None:intergenic | 30.0% |
!! | TGGTGTAAAGGCTTTTAAAA+CGG | + | Chr7:85758315-85758334 | None:intergenic | 30.0% |
!! | TGTGCATGTTGATAATGATA+TGG | + | Chr7:85757578-85757597 | None:intergenic | 30.0% |
!!! | GAGTTTTGTTCTTGAATGTT+AGG | - | Chr7:85757369-85757388 | MsG0780041038.01.T01:intron | 30.0% |
AAAACCCAACGGCAAAATAT+AGG | - | Chr7:85757034-85757053 | MsG0780041038.01.T01:CDS | 35.0% | |
AATGAAGGATTGACAATGGA+AGG | - | Chr7:85758535-85758554 | MsG0780041038.01.T01:intron | 35.0% | |
ACATTTGTGAGATTTGTGGA+AGG | - | Chr7:85757423-85757442 | MsG0780041038.01.T01:intron | 35.0% | |
GGCATTGCAGATTCAAAAAA+TGG | - | Chr7:85757055-85757074 | MsG0780041038.01.T01:CDS | 35.0% | |
TATATACCACGTTGGTGTAA+AGG | + | Chr7:85758327-85758346 | None:intergenic | 35.0% | |
TCATTTCGGTTCTGTTCTTT+GGG | - | Chr7:85757458-85757477 | MsG0780041038.01.T01:intron | 35.0% | |
TCTTCTCTTGCATTTAAAGG+AGG | + | Chr7:85758637-85758656 | None:intergenic | 35.0% | |
TTAGATTGCAACAATGGTGA+TGG | - | Chr7:85756922-85756941 | MsG0780041038.01.T01:CDS | 35.0% | |
TTCATTTCGGTTCTGTTCTT+TGG | - | Chr7:85757457-85757476 | MsG0780041038.01.T01:intron | 35.0% | |
! | AATGCCTATATTTTGCCGTT+GGG | + | Chr7:85757041-85757060 | None:intergenic | 35.0% |
! | ATATATTCTGCTGCATTGAC+AGG | - | Chr7:85758373-85758392 | MsG0780041038.01.T01:intron | 35.0% |
! | ATGATGTTGAATGATGGAGA+TGG | + | Chr7:85757677-85757696 | None:intergenic | 35.0% |
! | CAAATGTAGGTGATGATGTA+TGG | + | Chr7:85757649-85757668 | None:intergenic | 35.0% |
! | GAAGAAAAGGTATACCTCAT+AGG | - | Chr7:85758652-85758671 | MsG0780041038.01.T01:CDS | 35.0% |
! | TATATTCTGCTGCATTGACA+GGG | - | Chr7:85758374-85758393 | MsG0780041038.01.T01:intron | 35.0% |
! | TGATGTTGAATGATGGAGAT+GGG | + | Chr7:85757676-85757695 | None:intergenic | 35.0% |
CAAAGACCATCAAGTCATTC+AGG | - | Chr7:85756978-85756997 | MsG0780041038.01.T01:CDS | 40.0% | |
CAAGTCATTCAGGTATGCAT+AGG | - | Chr7:85756988-85757007 | MsG0780041038.01.T01:CDS | 40.0% | |
GCTCACATTTGTGAGATTTG+TGG | - | Chr7:85757419-85757438 | MsG0780041038.01.T01:intron | 40.0% | |
TAAAAGCCTTTACACCAACG+TGG | - | Chr7:85758318-85758337 | MsG0780041038.01.T01:CDS | 40.0% | |
TCAGAAGAAGAATTGCGTGA+AGG | - | Chr7:85758574-85758593 | MsG0780041038.01.T01:intron | 40.0% | |
TCTCTTGCATTTAAAGGAGG+TGG | + | Chr7:85758634-85758653 | None:intergenic | 40.0% | |
TGCATACCTGAATGACTTGA+TGG | + | Chr7:85756987-85757006 | None:intergenic | 40.0% | |
TTAGGCCTCAACCAAAATCT+GGG | - | Chr7:85757387-85757406 | MsG0780041038.01.T01:intron | 40.0% | |
! | ATATTCTGCTGCATTGACAG+GGG | - | Chr7:85758375-85758394 | MsG0780041038.01.T01:intron | 40.0% |
! | CAATGCCTATATTTTGCCGT+TGG | + | Chr7:85757042-85757061 | None:intergenic | 40.0% |
! | GTCAGAGATTCAGAAAGTGT+TGG | - | Chr7:85757307-85757326 | MsG0780041038.01.T01:intron | 40.0% |
! | TATACCTCATAGGCACCTTT+TGG | - | Chr7:85758662-85758681 | MsG0780041038.01.T01:CDS | 40.0% |
!! | CAGAAAGTGTTGGACATTAG+TGG | - | Chr7:85757317-85757336 | MsG0780041038.01.T01:intron | 40.0% |
!! | GGAGCTTGTTGGATTCATTT+CGG | - | Chr7:85757444-85757463 | MsG0780041038.01.T01:intron | 40.0% |
!! | GTTCTGTTCTTTGGGATGTA+AGG | - | Chr7:85757466-85757485 | MsG0780041038.01.T01:intron | 40.0% |
AGATGCAAGCTTTGCTTTGG+AGG | - | Chr7:85758507-85758526 | MsG0780041038.01.T01:intron | 45.0% | |
CCTCAACCAAAATCTGGGAA+AGG | - | Chr7:85757392-85757411 | MsG0780041038.01.T01:intron | 45.0% | |
CTTGCATTTAAAGGAGGTGG+AGG | + | Chr7:85758631-85758650 | None:intergenic | 45.0% | |
GATTTGTGGAAGGAGCTTGT+TGG | - | Chr7:85757433-85757452 | MsG0780041038.01.T01:intron | 45.0% | |
GTTAGGCCTCAACCAAAATC+TGG | - | Chr7:85757386-85757405 | MsG0780041038.01.T01:intron | 45.0% | |
TGGAGATGCAAGCTTTGCTT+TGG | - | Chr7:85758504-85758523 | MsG0780041038.01.T01:intron | 45.0% | |
! | GATGCAAGCTTTGCTTTGGA+GGG | - | Chr7:85758508-85758527 | MsG0780041038.01.T01:intron | 45.0% |
! | GCTACTCCTTTCCCAGATTT+TGG | + | Chr7:85757401-85757420 | None:intergenic | 45.0% |
! | GGAGATGGGCTTTCAAATGT+AGG | + | Chr7:85757662-85757681 | None:intergenic | 45.0% |
! | TGTAGGTGATGATGTATGGG+TGG | + | Chr7:85757645-85757664 | None:intergenic | 45.0% |
! | TGTATTTGGTGGAATGGGTC+AGG | - | Chr7:85757128-85757147 | MsG0780041038.01.T01:intron | 45.0% |
!! | AGAACCAAAAGGTGCCTATG+AGG | + | Chr7:85758669-85758688 | None:intergenic | 45.0% |
!! | GCTTTGGAGGGTAAGAATGA+AGG | - | Chr7:85758520-85758539 | MsG0780041038.01.T01:intron | 45.0% |
!!! | CCTTTCCCAGATTTTGGTTG+AGG | + | Chr7:85757395-85757414 | None:intergenic | 45.0% |
!!! | TTTTTTTTTATTAATGTATT+TGG | - | Chr7:85757114-85757133 | MsG0780041038.01.T01:intron | 5.0% |
GCATTTAAAGGAGGTGGAGG+AGG | + | Chr7:85758628-85758647 | None:intergenic | 50.0% | |
! | AGGTGATGATGTATGGGTGG+TGG | + | Chr7:85757642-85757661 | None:intergenic | 50.0% |
! | GGTGATGATGTATGGGTGGT+GGG | + | Chr7:85757641-85757660 | None:intergenic | 50.0% |
! | GCTGCATTGACAGGGGAACA+TGG | - | Chr7:85758382-85758401 | MsG0780041038.01.T01:intron | 55.0% |
! | GGAGGTGGAGGAGGCGTGAG+AGG | + | Chr7:85758619-85758638 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr7 | gene | 85756913 | 85758696 | 85756913 | ID=MsG0780041038.01;Name=MsG0780041038.01 |
Chr7 | mRNA | 85756913 | 85758696 | 85756913 | ID=MsG0780041038.01.T01;Parent=MsG0780041038.01;Name=MsG0780041038.01.T01;_AED=0.41;_eAED=0.41;_QI=0|0|0|1|1|1|3|0|171 |
Chr7 | exon | 85758610 | 85758696 | 85758610 | ID=MsG0780041038.01.T01:exon:19369;Parent=MsG0780041038.01.T01 |
Chr7 | exon | 85758122 | 85758337 | 85758122 | ID=MsG0780041038.01.T01:exon:19368;Parent=MsG0780041038.01.T01 |
Chr7 | exon | 85756913 | 85757125 | 85756913 | ID=MsG0780041038.01.T01:exon:19367;Parent=MsG0780041038.01.T01 |
Chr7 | CDS | 85758610 | 85758696 | 85758610 | ID=MsG0780041038.01.T01:cds;Parent=MsG0780041038.01.T01 |
Chr7 | CDS | 85758122 | 85758337 | 85758122 | ID=MsG0780041038.01.T01:cds;Parent=MsG0780041038.01.T01 |
Chr7 | CDS | 85756913 | 85757125 | 85756913 | ID=MsG0780041038.01.T01:cds;Parent=MsG0780041038.01.T01 |
Gene Sequence |
Protein sequence |