AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042496.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042496.01.T01 MTR_8g015230 92.509 267 1 1 1 267 1 248 0.0 498
MsG0880042496.01.T01 MTR_8g015230 97.887 142 3 0 1 142 1 142 1.71e-103 299
MsG0880042496.01.T01 MTR_0361s0030 84.426 122 0 1 78 199 1 103 6.98e-65 198
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042496.01.T01 AT3G21350 62.992 254 74 2 14 267 24 257 8.85e-99 290
MsG0880042496.01.T01 AT3G21350 54.237 295 74 4 14 267 24 298 2.22e-90 270

Find 85 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAGCTGCTTCCTGAGTTTC+AGG 0.111896 8:+9559071 None:intergenic
AATGCTTGCTTATTATATTT+TGG 0.131733 8:-9563499 MsG0880042496.01.T01:CDS
TGCAGGACCTTGATCAAGTA+TGG 0.244509 8:+9559025 None:intergenic
GTTAACTTTATGTTATTCTT+TGG 0.255357 8:-9558925 MsG0880042496.01.T01:three_prime_UTR
GATTAATGTTTATTCCTTTC+GGG 0.268497 8:-9558967 MsG0880042496.01.T01:three_prime_UTR
TGATTAATGTTTATTCCTTT+CGG 0.268854 8:-9558968 MsG0880042496.01.T01:three_prime_UTR
CATAAAGTTAACCATCTTTC+GGG 0.270475 8:+9558936 None:intergenic
CACAGTGATATTTACATTCA+TGG 0.278321 8:+9558871 None:intergenic
ATTTCAGTTTAGTCAATATA+TGG 0.279026 8:-9558827 MsG0880042496.01.T01:three_prime_UTR
TCCTTAGCCGCCTTTGGTTC+CGG 0.292862 8:+9561029 None:intergenic
AGCATTGGAGTAACTTTATC+AGG 0.301759 8:+9563516 None:intergenic
TATGCTTCAGAGATCAATTA+TGG 0.306984 8:-9563846 MsG0880042496.01.T01:CDS
ACATAAAGTTAACCATCTTT+CGG 0.308898 8:+9558935 None:intergenic
TTCTCAGTTTCTGCTGTTGA+AGG 0.324297 8:+9559098 None:intergenic
TTGAATAAAATTAGAAAAGA+TGG 0.345666 8:+9563399 None:intergenic
ATAACAATCTTAATTATCAT+TGG 0.359186 8:-9558788 MsG0880042496.01.T01:three_prime_UTR
ATTGTCTCCTTAGCCGCCTT+TGG 0.366190 8:+9561023 None:intergenic
ATTCCGGTCATGTCGGTTCC+CGG 0.388633 8:+9563868 None:intergenic
AATGGTGGCGGAGGCGGAGC+AGG 0.400010 8:+9559140 None:intergenic
CCGTCTAACATTCCCATTCC+CGG 0.401387 8:+9563913 None:intergenic
CTTTATCACCTTTCTACGAT+TGG 0.408696 8:-9563777 MsG0880042496.01.T01:CDS
TGAAAACGAGACTACAATTC+CGG 0.419986 8:-9561048 MsG0880042496.01.T01:CDS
GGAACATACCCTTCTGGAAA+TGG 0.420482 8:+9559122 None:intergenic
AAGTTGGAGAAGATAGGATA+TGG 0.422814 8:-9562756 MsG0880042496.01.T01:intron
TTGATCTCTGAAGCATATTC+CGG 0.424128 8:+9563852 None:intergenic
TCTGGAAATGGTGGCGGAGG+CGG 0.425379 8:+9559134 None:intergenic
TAGGGTTTCAGGAAAATGAT+TGG 0.437092 8:-9563609 MsG0880042496.01.T01:intron
GTGGATGATGAGAACGCATT+CGG 0.442890 8:+9563734 None:intergenic
CAGCTGCTTCCTGAGTTTCA+GGG 0.462781 8:+9559072 None:intergenic
GGGAAGGCGTACCCGAAAGA+TGG 0.463156 8:-9558947 MsG0880042496.01.T01:three_prime_UTR
TCCGGAACCAAAGGCGGCTA+AGG 0.463236 8:-9561030 MsG0880042496.01.T01:CDS
GGTGGCGGAGGCGGAGCAGG+TGG 0.464187 8:+9559143 None:intergenic
TACTACAGCTGCATCTAAGT+TGG 0.467810 8:-9562772 MsG0880042496.01.T01:CDS
GAGATGGCGACACCGGGAAT+GGG 0.471762 8:-9563925 MsG0880042496.01.T01:CDS
ATTCCCGGTGTCGCCATCTC+CGG 0.472757 8:+9563928 None:intergenic
GAAGGTGGAACATACCCTTC+TGG 0.474764 8:+9559116 None:intergenic
TGAGAAAGGCCCTGAAACTC+AGG 0.475765 8:-9559081 MsG0880042496.01.T01:CDS
TCAGTTTCTGCTGTTGAAGG+TGG 0.476136 8:+9559101 None:intergenic
GGAGATGGCGACACCGGGAA+TGG 0.476646 8:-9563926 MsG0880042496.01.T01:exon
GGCACTATATTATATTGAAA+AGG 0.479926 8:-9562799 MsG0880042496.01.T01:CDS
ATATGTGTTGAGTGAAGTTA+TGG 0.488473 8:-9563580 MsG0880042496.01.T01:CDS
AGTACCGACGGCGCAACCAC+CGG 0.490492 8:-9563887 MsG0880042496.01.T01:CDS
GTTCCCGGTGGTTGCGCCGT+CGG 0.494514 8:+9563883 None:intergenic
AAAATATAATAAGCAAGCAT+TGG 0.508033 8:+9563501 None:intergenic
GACTACAATTCCGGAACCAA+AGG 0.516918 8:-9561039 MsG0880042496.01.T01:CDS
ATTGTTATTGCTTACACTGT+CGG 0.518070 8:+9558803 None:intergenic
TTCGGGTACGCCTTCCCGAA+AGG 0.519458 8:+9558953 None:intergenic
GCATCTAAGTTGGAGAAGAT+AGG 0.520492 8:-9562762 MsG0880042496.01.T01:CDS
GTACCGACGGCGCAACCACC+GGG 0.520900 8:-9563886 MsG0880042496.01.T01:CDS
GGTGTCGCCATCTCCGGCAC+CGG 0.523288 8:+9563934 None:intergenic
CACTGAGAGAGAACCGGTGC+CGG 0.524691 8:-9563947 MsG0880042496.01.T01:five_prime_UTR
CCACCGGGAACCGACATGAC+CGG 0.527398 8:-9563871 MsG0880042496.01.T01:CDS
TCACAGCACTGAGAGAGAAC+CGG 0.539374 8:-9563953 MsG0880042496.01.T01:five_prime_UTR
GAGAGAACCGGTGCCGGAGA+TGG 0.543791 8:-9563941 MsG0880042496.01.T01:exon
CCTTCTGGAAATGGTGGCGG+AGG 0.545037 8:+9559131 None:intergenic
GCAGGACCTTGATCAAGTAT+GGG 0.546098 8:+9559026 None:intergenic
TCTTGCTTCCTTGCAACGCA+AGG 0.547305 8:-9560967 MsG0880042496.01.T01:intron
GTCCACTGCACTTCGCTACA+CGG 0.547653 8:-9558756 MsG0880042496.01.T01:three_prime_UTR
CTTAAAAGAAATTAAGCGAG+TGG 0.550328 8:-9560997 MsG0880042496.01.T01:CDS
TACCCTTCTGGAAATGGTGG+CGG 0.551262 8:+9559128 None:intergenic
GTGCCGGAGATGGCGACACC+GGG 0.551916 8:-9563931 MsG0880042496.01.T01:exon
GTTGATCCCATACTTGATCA+AGG 0.558709 8:-9559032 MsG0880042496.01.T01:CDS
GGTGCCGGAGATGGCGACAC+CGG 0.565787 8:-9563932 MsG0880042496.01.T01:exon
TCAACTCACCTTGCGTTGCA+AGG 0.566309 8:+9560959 None:intergenic
TTAGAAGTCCAATCGTAGAA+AGG 0.566992 8:+9563769 None:intergenic
GTCCGTGTAGCGAAGTGCAG+TGG 0.573843 8:+9558754 None:intergenic
AATGTTTATTCCTTTCGGGA+AGG 0.579907 8:-9558963 MsG0880042496.01.T01:three_prime_UTR
TTATCATGAAGAAGCAGAAG+AGG 0.585561 8:-9563545 MsG0880042496.01.T01:CDS
CTCCGCCACCATTTCCAGAA+GGG 0.586553 8:-9559130 MsG0880042496.01.T01:CDS
TATCATGAAGAAGCAGAAGA+GGG 0.593643 8:-9563544 MsG0880042496.01.T01:CDS
TCAACAGCAGAAACTGAGAA+AGG 0.597039 8:-9559095 MsG0880042496.01.T01:CDS
GTTAGACGGCGGAGTACCGA+CGG 0.600181 8:-9563899 MsG0880042496.01.T01:CDS
CCTCCGCCACCATTTCCAGA+AGG 0.602841 8:-9559131 MsG0880042496.01.T01:CDS
AATTACGTACGTGAGTTGAG+AGG 0.602924 8:+9563705 None:intergenic
TCAAGTATGGGATCAACAGT+AGG 0.616233 8:+9559038 None:intergenic
CCGGGAATGGGAATGTTAGA+CGG 0.617152 8:-9563913 MsG0880042496.01.T01:CDS
TACAATTCCGGAACCAAAGG+CGG 0.617747 8:-9561036 MsG0880042496.01.T01:CDS
GAAGCATATTCCGGTCATGT+CGG 0.643592 8:+9563861 None:intergenic
ACATACCCTTCTGGAAATGG+TGG 0.643798 8:+9559125 None:intergenic
AAGACGAGGTTACGATCGAG+TGG 0.652262 8:+9563811 None:intergenic
GTGAGTTGAGAGGAATCGAG+TGG 0.672007 8:+9563715 None:intergenic
CCGGTCATGTCGGTTCCCGG+TGG 0.674640 8:+9563871 None:intergenic
AAGCGAAGTAATCGAAGACG+AGG 0.677731 8:+9563797 None:intergenic
AGACGAGGTTACGATCGAGT+GGG 0.681742 8:+9563812 None:intergenic
GGAATGGGAATGTTAGACGG+CGG 0.769986 8:-9563910 MsG0880042496.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAAAAGAAGTAATTA+TGG + Chr8:9563270-9563289 None:intergenic 10.0%
!! ATTAAAAAAGAAGTAATTAT+GGG + Chr8:9563269-9563288 None:intergenic 10.0%
!! CAAAAAATAAATAAAATCAT+TGG + Chr8:9561615-9561634 None:intergenic 10.0%
!! TAATTTATTTATTACAACTT+TGG - Chr8:9563013-9563032 MsG0880042496.01.T01:intron 10.0%
!!! AAAAAAAGTGATTTTTATTA+CGG - Chr8:9561132-9561151 MsG0880042496.01.T01:intron 10.0%
!!! AAAATAGATTTTTTTTTTAG+AGG - Chr8:9561016-9561035 MsG0880042496.01.T01:CDS 10.0%
!!! GTTTTTTTATTTCAAATATT+TGG - Chr8:9559852-9559871 MsG0880042496.01.T01:intron 10.0%
!! ATAACAATCTTAATTATCAT+TGG - Chr8:9563942-9563961 MsG0880042496.01.T01:exon 15.0%
!! GAAATAATTTGAACTATTTA+TGG - Chr8:9561936-9561955 MsG0880042496.01.T01:intron 15.0%
!! TATTAACTATAAATGTGTAA+CGG + Chr8:9560307-9560326 None:intergenic 15.0%
!! TTGAATAAAATTAGAAAAGA+TGG + Chr8:9559334-9559353 None:intergenic 15.0%
!!! AAAAAGAATGAAATTTTGAT+AGG - Chr8:9563727-9563746 MsG0880042496.01.T01:CDS 15.0%
!!! AACAAATAATTTAGTTTGTT+TGG + Chr8:9561111-9561130 None:intergenic 15.0%
!!! TACTTCTTTTTTAATTCAAT+AGG - Chr8:9563274-9563293 MsG0880042496.01.T01:intron 15.0%
!!! TATACAGAAATTTTAGATAA+AGG + Chr8:9562933-9562952 None:intergenic 15.0%
!!! TTATTAAGCAATTTTGTTTA+TGG - Chr8:9560277-9560296 MsG0880042496.01.T01:intron 15.0%
!!! TTATTTTAATCCTTAACAAA+CGG - Chr8:9561236-9561255 MsG0880042496.01.T01:intron 15.0%
!!! TTTTAAAAAGTTGTAACAAA+CGG + Chr8:9560923-9560942 None:intergenic 15.0%
!! AAAATATAATAAGCAAGCAT+TGG + Chr8:9559232-9559251 None:intergenic 20.0%
!! AATTGGAAAGATTAAATAAG+AGG + Chr8:9562198-9562217 None:intergenic 20.0%
!! ACACAATTTCATAAAATACT+TGG + Chr8:9561910-9561929 None:intergenic 20.0%
!! ATAGTTAATAGTGTTTGTTT+GGG - Chr8:9560317-9560336 MsG0880042496.01.T01:intron 20.0%
!! ATTTCAGTTTAGTCAATATA+TGG - Chr8:9563903-9563922 MsG0880042496.01.T01:CDS 20.0%
!! CACAATTTCATAAAATACTT+GGG + Chr8:9561909-9561928 None:intergenic 20.0%
!! CTTAAAAAAGCTATAACAAA+CGG + Chr8:9560852-9560871 None:intergenic 20.0%
!! GTTAACTTTATGTTATTCTT+TGG - Chr8:9563805-9563824 MsG0880042496.01.T01:CDS 20.0%
!! TATAGTTAATAGTGTTTGTT+TGG - Chr8:9560316-9560335 MsG0880042496.01.T01:intron 20.0%
!! TGAAATTGAGAATGAAAATT+AGG + Chr8:9559073-9559092 None:intergenic 20.0%
!! TGATTAATGTTTATTCCTTT+CGG - Chr8:9563762-9563781 MsG0880042496.01.T01:CDS 20.0%
!! TTAAAAAAGCTATAACAAAC+GGG + Chr8:9560851-9560870 None:intergenic 20.0%
!! TTAATAAAAAAGAAAGGGAT+AGG - Chr8:9561860-9561879 MsG0880042496.01.T01:intron 20.0%
!! TTAGTTAAATTCCTATAGTT+AGG + Chr8:9563426-9563445 None:intergenic 20.0%
!! TTGGATACAACTATATAAAA+GGG + Chr8:9561092-9561111 None:intergenic 20.0%
!! TTTGGATACAACTATATAAA+AGG + Chr8:9561093-9561112 None:intergenic 20.0%
!!! AATGCTTGCTTATTATATTT+TGG - Chr8:9559231-9559250 MsG0880042496.01.T01:intron 20.0%
!!! ACTTTGATCTTTTGATTAAT+TGG + Chr8:9562215-9562234 None:intergenic 20.0%
!!! TATTTTAATCCTTAACAAAC+GGG - Chr8:9561237-9561256 MsG0880042496.01.T01:intron 20.0%
!!! TTCTATCACATTTTTATACA+GGG + Chr8:9560213-9560232 None:intergenic 20.0%
!!! TTTATTTCAAATATTTGGTG+TGG - Chr8:9559857-9559876 MsG0880042496.01.T01:intron 20.0%
!!! TTTCTATCACATTTTTATAC+AGG + Chr8:9560214-9560233 None:intergenic 20.0%
!!! TTTTCAAAATCCAAAAACTA+AGG + Chr8:9560808-9560827 None:intergenic 20.0%
! AAGAGGATATTAATTTACTC+AGG + Chr8:9562181-9562200 None:intergenic 25.0%
! AATGAAAATTAGGTTAGGTT+AGG + Chr8:9559063-9559082 None:intergenic 25.0%
! ACATAAAGTTAACCATCTTT+CGG + Chr8:9563798-9563817 None:intergenic 25.0%
! AGGAAGAACATAAGATATAA+TGG + Chr8:9561562-9561581 None:intergenic 25.0%
! ATGTTACTGTTATTGTTCTA+AGG + Chr8:9560528-9560547 None:intergenic 25.0%
! CTAACGAAATTATGCAAAAA+GGG + Chr8:9560610-9560629 None:intergenic 25.0%
! GATTAATGTTTATTCCTTTC+GGG - Chr8:9563763-9563782 MsG0880042496.01.T01:CDS 25.0%
! GGCACTATATTATATTGAAA+AGG - Chr8:9559931-9559950 MsG0880042496.01.T01:intron 25.0%
! TAAAAATTTCAACAAGAACG+TGG + Chr8:9561591-9561610 None:intergenic 25.0%
! TAACGAAATTATGCAAAAAG+GGG + Chr8:9560609-9560628 None:intergenic 25.0%
! TCTAACGAAATTATGCAAAA+AGG + Chr8:9560611-9560630 None:intergenic 25.0%
! TCTGTATTACATAGTAATTG+TGG + Chr8:9560777-9560796 None:intergenic 25.0%
! TGGATACAACTATATAAAAG+GGG + Chr8:9561091-9561110 None:intergenic 25.0%
! TGTTGTCAAAAAGTTATTTG+CGG - Chr8:9563330-9563349 MsG0880042496.01.T01:intron 25.0%
! TTCTTCATGATAAAAAGATG+AGG + Chr8:9559178-9559197 None:intergenic 25.0%
! TTGAGAATGAAAATTAGGTT+AGG + Chr8:9559068-9559087 None:intergenic 25.0%
!! ATTGTTTGAAAAGTACACAA+TGG + Chr8:9561807-9561826 None:intergenic 25.0%
!! CAAAATTTCATTCTTTTTGC+AGG + Chr8:9563725-9563744 None:intergenic 25.0%
!! TCTATTCTTCTTAGTTCTTA+TGG + Chr8:9563238-9563257 None:intergenic 25.0%
!! TGTCATGATTTTTGATATGA+TGG - Chr8:9560082-9560101 MsG0880042496.01.T01:intron 25.0%
!!! AAGCTTTATTTCACAATAGA+AGG + Chr8:9560501-9560520 None:intergenic 25.0%
!!! AATGAAATTTTGATAGGTAC+AGG - Chr8:9563733-9563752 MsG0880042496.01.T01:CDS 25.0%
!!! ACTATTCTATTTCTAACCAT+AGG - Chr8:9562685-9562704 MsG0880042496.01.T01:intron 25.0%
!!! CAGTTTTTTTAATAGCAGTT+TGG + Chr8:9560375-9560394 None:intergenic 25.0%
!!! CTATTCTATTTCTAACCATA+GGG - Chr8:9562686-9562705 MsG0880042496.01.T01:intron 25.0%
!!! CTTGCTTATTATATTTTGGA+TGG - Chr8:9559235-9559254 MsG0880042496.01.T01:intron 25.0%
!!! TTCACTCTTAACCATTTTTA+GGG - Chr8:9559103-9559122 MsG0880042496.01.T01:CDS 25.0%
!!! TTTCACTCTTAACCATTTTT+AGG - Chr8:9559102-9559121 MsG0880042496.01.T01:CDS 25.0%
AAATGTGATAGAAACTTTGC+AGG - Chr8:9560220-9560239 MsG0880042496.01.T01:intron 30.0%
AAATTAGGTTAGGTTAGGTT+AGG + Chr8:9559058-9559077 None:intergenic 30.0%
AATCTCAAATATTAGTGTCG+TGG - Chr8:9559418-9559437 MsG0880042496.01.T01:intron 30.0%
AATGTGATAGAAACTTTGCA+GGG - Chr8:9560221-9560240 MsG0880042496.01.T01:intron 30.0%
AATTCTAGCAGCAAAAACAT+TGG + Chr8:9559287-9559306 None:intergenic 30.0%
ACTAAGAAGAATAGAAGTCT+TGG - Chr8:9563243-9563262 MsG0880042496.01.T01:intron 30.0%
AGTTTGACAGAACAACATAA+AGG + Chr8:9562668-9562687 None:intergenic 30.0%
ATACCTCAACAATGGAAAAA+GGG + Chr8:9561438-9561457 None:intergenic 30.0%
ATATGTGTTGAGTGAAGTTA+TGG - Chr8:9559150-9559169 MsG0880042496.01.T01:intron 30.0%
ATCATTACTAGTAACCAATG+AGG + Chr8:9562790-9562809 None:intergenic 30.0%
ATTACATAGCACATCATTAG+AGG - Chr8:9561825-9561844 MsG0880042496.01.T01:intron 30.0%
CACAGTGATATTTACATTCA+TGG + Chr8:9563862-9563881 None:intergenic 30.0%
CATAAAGTTAACCATCTTTC+GGG + Chr8:9563797-9563816 None:intergenic 30.0%
CTATTGTGAAATAAAGCTTC+AGG - Chr8:9560502-9560521 MsG0880042496.01.T01:intron 30.0%
CTTAAAAGAAATTAAGCGAG+TGG - Chr8:9561733-9561752 MsG0880042496.01.T01:intron 30.0%
GCAAAAACATTGGATAATTG+AGG + Chr8:9559277-9559296 None:intergenic 30.0%
GTTAAATTCCTATAGTTAGG+AGG + Chr8:9563423-9563442 None:intergenic 30.0%
GTTAAGAACTTTGATGTCAA+CGG - Chr8:9560157-9560176 MsG0880042496.01.T01:intron 30.0%
GTTGTCAAAAAGTTATTTGC+GGG - Chr8:9563331-9563350 MsG0880042496.01.T01:intron 30.0%
GTTTGACAGAACAACATAAA+AGG + Chr8:9562667-9562686 None:intergenic 30.0%
TAATCTGTTGAAAACCAGTT+TGG - Chr8:9561264-9561283 MsG0880042496.01.T01:intron 30.0%
TATACCTCAACAATGGAAAA+AGG + Chr8:9561439-9561458 None:intergenic 30.0%
TATGCTTCAGAGATCAATTA+TGG - Chr8:9558884-9558903 MsG0880042496.01.T01:three_prime_UTR 30.0%
TCAAGTAGAATCAATTCTTG+TGG + Chr8:9559613-9559632 None:intergenic 30.0%
TCCCATTAAGTGAATAGTAT+CGG + Chr8:9560703-9560722 None:intergenic 30.0%
TTGCTGATAAACACAAACTT+AGG - Chr8:9563464-9563483 MsG0880042496.01.T01:CDS 30.0%
TTGTCAAAAAGTTATTTGCG+GGG - Chr8:9563332-9563351 MsG0880042496.01.T01:intron 30.0%
TTTAGAGGAGAGAGAAAATA+TGG - Chr8:9561031-9561050 MsG0880042496.01.T01:CDS 30.0%
TTTGTGACATTGATCTTGTA+GGG - Chr8:9559905-9559924 MsG0880042496.01.T01:intron 30.0%
! AATAGCAGTTTGGTTCATTT+CGG + Chr8:9560365-9560384 None:intergenic 30.0%
! ATATTGCTATTACGATGTGA+TGG - Chr8:9560666-9560685 MsG0880042496.01.T01:intron 30.0%
! ATGAAGTGTTAGTGTATGTT+TGG - Chr8:9559500-9559519 MsG0880042496.01.T01:intron 30.0%
! ATTGTTATTGCTTACACTGT+CGG + Chr8:9563930-9563949 None:intergenic 30.0%
! CTCTATGTTTCTGAAAAAAG+AGG + Chr8:9562462-9562481 None:intergenic 30.0%
! CTTACTGATTAGTAGTTTGT+GGG - Chr8:9562416-9562435 MsG0880042496.01.T01:intron 30.0%
! CTTTTGTAATAACAAACCAG+AGG - Chr8:9563377-9563396 MsG0880042496.01.T01:intron 30.0%
! TCTTACTGATTAGTAGTTTG+TGG - Chr8:9562415-9562434 MsG0880042496.01.T01:intron 30.0%
! TTTTATACAGGGTCTAAGAA+AGG + Chr8:9560202-9560221 None:intergenic 30.0%
! TTTTCCTGAAACCCTAAAAA+TGG + Chr8:9559117-9559136 None:intergenic 30.0%
! TTTTTCCATTGTTGAGGTAT+AGG - Chr8:9561438-9561457 MsG0880042496.01.T01:intron 30.0%
!! CTCTGGTTTGTTATTACAAA+AGG + Chr8:9563379-9563398 None:intergenic 30.0%
!!! AACTGGTTTTCAACAGATTA+AGG + Chr8:9561264-9561283 None:intergenic 30.0%
!!! AAGTTTTTTCTCCTTTTCAC+AGG - Chr8:9563194-9563213 MsG0880042496.01.T01:intron 30.0%
!!! ACTGGTTTTCAACAGATTAA+GGG + Chr8:9561263-9561282 None:intergenic 30.0%
!!! AGTTTTTTCTCCTTTTCACA+GGG - Chr8:9563195-9563214 MsG0880042496.01.T01:intron 30.0%
!!! GATTTTTTCTCTCTCTCTTT+TGG - Chr8:9560004-9560023 MsG0880042496.01.T01:intron 30.0%
!!! TTAACCATTTTTAGGGTTTC+AGG - Chr8:9559110-9559129 MsG0880042496.01.T01:CDS 30.0%
AAACCAAGCATGTGAAGAAT+AGG + Chr8:9562599-9562618 None:intergenic 35.0%
AACATCCTATACCTCAACAA+TGG + Chr8:9561446-9561465 None:intergenic 35.0%
AACCAAGCATGTGAAGAATA+GGG + Chr8:9562598-9562617 None:intergenic 35.0%
AACTTGTAATGCCTAGACTT+CGG - Chr8:9560454-9560473 MsG0880042496.01.T01:intron 35.0%
AAGTGCAGTGATTACTGAAT+AGG - Chr8:9563134-9563153 MsG0880042496.01.T01:intron 35.0%
AAGTTGGAGAAGATAGGATA+TGG - Chr8:9559974-9559993 MsG0880042496.01.T01:intron 35.0%
AATGTTTATTCCTTTCGGGA+AGG - Chr8:9563767-9563786 MsG0880042496.01.T01:CDS 35.0%
ACTATGTAATACAGAGTGAG+TGG - Chr8:9560782-9560801 MsG0880042496.01.T01:intron 35.0%
ACTCAAACAAAATCACCATG+AGG + Chr8:9560580-9560599 None:intergenic 35.0%
ACTGAATCACATAACCAGTT+TGG - Chr8:9561309-9561328 MsG0880042496.01.T01:intron 35.0%
ACTGTCATCCTAGAATGAAA+GGG + Chr8:9563061-9563080 None:intergenic 35.0%
ATCACATAACCAGTTTGGTT+TGG - Chr8:9561314-9561333 MsG0880042496.01.T01:intron 35.0%
ATTTCAACAAGAACGTGGAT+TGG + Chr8:9561586-9561605 None:intergenic 35.0%
CAGTAAGATTGTGATGAGAT+GGG + Chr8:9562403-9562422 None:intergenic 35.0%
CTTTATCACCTTTCTACGAT+TGG - Chr8:9558953-9558972 MsG0880042496.01.T01:three_prime_UTR 35.0%
GAAACAATTGCAGTTTGGTT+CGG - Chr8:9561344-9561363 MsG0880042496.01.T01:intron 35.0%
GAGATTATCCCTTTCATTCT+AGG - Chr8:9563050-9563069 MsG0880042496.01.T01:intron 35.0%
GCAAATAGCAACATCATACA+TGG + Chr8:9561478-9561497 None:intergenic 35.0%
GCCGATACTATTCACTTAAT+GGG - Chr8:9560699-9560718 MsG0880042496.01.T01:intron 35.0%
GCGGGGTAAAAATTAAATGA+TGG - Chr8:9563349-9563368 MsG0880042496.01.T01:intron 35.0%
GGAATGCATGAAAAATCAGA+TGG + Chr8:9561541-9561560 None:intergenic 35.0%
GTTTGTGACATTGATCTTGT+AGG - Chr8:9559904-9559923 MsG0880042496.01.T01:intron 35.0%
TAATGTTCTTCCACTCAGAA+AGG + Chr8:9563175-9563194 None:intergenic 35.0%
TAGGGTTTCAGGAAAATGAT+TGG - Chr8:9559121-9559140 MsG0880042496.01.T01:CDS 35.0%
TATCATGAAGAAGCAGAAGA+GGG - Chr8:9559186-9559205 MsG0880042496.01.T01:intron 35.0%
TCAACAAACCTTATGTAGAC+CGG - Chr8:9559350-9559369 MsG0880042496.01.T01:intron 35.0%
TCAGTAAGATTGTGATGAGA+TGG + Chr8:9562404-9562423 None:intergenic 35.0%
TGAAAACGAGACTACAATTC+CGG - Chr8:9561682-9561701 MsG0880042496.01.T01:intron 35.0%
TTAGAAGTCCAATCGTAGAA+AGG + Chr8:9558964-9558983 None:intergenic 35.0%
TTATCATGAAGAAGCAGAAG+AGG - Chr8:9559185-9559204 MsG0880042496.01.T01:intron 35.0%
TTATGGCTAGATCAATCTCT+TGG + Chr8:9563221-9563240 None:intergenic 35.0%
TTATGTGATTCAGTGCACTA+TGG + Chr8:9561303-9561322 None:intergenic 35.0%
TTTGACTCTGTGCTCATTAA+CGG - Chr8:9561631-9561650 MsG0880042496.01.T01:intron 35.0%
! AATTTTGTCTCCTCCAAAAG+TGG + Chr8:9559528-9559547 None:intergenic 35.0%
! AGCATTGGAGTAACTTTATC+AGG + Chr8:9559217-9559236 None:intergenic 35.0%
! ATCTCACTGTAGCTTTTATG+GGG - Chr8:9562974-9562993 MsG0880042496.01.T01:intron 35.0%
! CATCTCACTGTAGCTTTTAT+GGG - Chr8:9562973-9562992 MsG0880042496.01.T01:intron 35.0%
! GGCTAGGCTTTTAAATAGTT+TGG + Chr8:9561401-9561420 None:intergenic 35.0%
! GTTTGTTACTCACGAAAACA+AGG - Chr8:9560043-9560062 MsG0880042496.01.T01:intron 35.0%
! TCATCTCACTGTAGCTTTTA+TGG - Chr8:9562972-9562991 MsG0880042496.01.T01:intron 35.0%
!! ATGTTGCTATTTGCAAACTG+TGG - Chr8:9561484-9561503 MsG0880042496.01.T01:intron 35.0%
!! TCTTGCTACAATTGAGTTGA+AGG + Chr8:9559735-9559754 None:intergenic 35.0%
!! TGTATGTTTGGTTCCACTTT+TGG - Chr8:9559512-9559531 MsG0880042496.01.T01:intron 35.0%
!! TTGATCTCTGAAGCATATTC+CGG + Chr8:9558881-9558900 None:intergenic 35.0%
!! TTTCTCTCTCTCTTTTGGTT+TGG - Chr8:9560009-9560028 MsG0880042496.01.T01:intron 35.0%
!!! TTGTTTTTGTGCGATTTGTG+AGG - Chr8:9562085-9562104 MsG0880042496.01.T01:intron 35.0%
AACCTCTATTCTTCATGTGC+AGG - Chr8:9562636-9562655 MsG0880042496.01.T01:intron 40.0%
ACTAGTAACCAATGAGGAGT+CGG + Chr8:9562784-9562803 None:intergenic 40.0%
CAAGTCTTGAGCTAATACAC+AGG + Chr8:9562824-9562843 None:intergenic 40.0%
CACAATAGAAGGTTCACTGT+TGG + Chr8:9560490-9560509 None:intergenic 40.0%
CACCATGAGGTGATAAATCT+AGG + Chr8:9560567-9560586 None:intergenic 40.0%
CACCTAGATTTATCACCTCA+TGG - Chr8:9560562-9560581 MsG0880042496.01.T01:intron 40.0%
CACTGTCATCCTAGAATGAA+AGG + Chr8:9563062-9563081 None:intergenic 40.0%
CAGGTGAAACAATTGCAGTT+TGG - Chr8:9561339-9561358 MsG0880042496.01.T01:intron 40.0%
CGAAACTAGATAACCCTACA+AGG + Chr8:9559823-9559842 None:intergenic 40.0%
CGCTACATACATACCTTGTA+GGG - Chr8:9559807-9559826 MsG0880042496.01.T01:intron 40.0%
CTCAAATATTAGTGTCGTGG+CGG - Chr8:9559421-9559440 MsG0880042496.01.T01:intron 40.0%
CTCGAAGTAATGCCAAGAAA+AGG + Chr8:9562297-9562316 None:intergenic 40.0%
CTTAACACCCACAAAAGTCA+CGG - Chr8:9561981-9562000 MsG0880042496.01.T01:intron 40.0%
GAATACTCAAAGAAGCCCTA+CGG + Chr8:9562704-9562723 None:intergenic 40.0%
GAATACTCAAAGAAGCCCTA+TGG + Chr8:9562704-9562723 None:intergenic 40.0%
GACATTGATCTTGTAGGGAA+GGG - Chr8:9559910-9559929 MsG0880042496.01.T01:intron 40.0%
GACGTGATTTACCACTTGTA+TGG + Chr8:9562337-9562356 None:intergenic 40.0%
GATTGTGATGAGATGGGAAA+AGG + Chr8:9562397-9562416 None:intergenic 40.0%
GGCCGATACTATTCACTTAA+TGG - Chr8:9560698-9560717 MsG0880042496.01.T01:intron 40.0%
GGGAAACACATCATGAATAG+TGG - Chr8:9562268-9562287 MsG0880042496.01.T01:intron 40.0%
GGTTAGGTTAGGTTAGGTTA+CGG + Chr8:9559052-9559071 None:intergenic 40.0%
GTTAGGTTAGGTTAGGTTAC+GGG + Chr8:9559051-9559070 None:intergenic 40.0%
GTTGATCCCATACTTGATCA+AGG - Chr8:9563698-9563717 MsG0880042496.01.T01:intron 40.0%
GTTTCAATGCTGAACCAAAC+TGG + Chr8:9561281-9561300 None:intergenic 40.0%
TACTACAGCTGCATCTAAGT+TGG - Chr8:9559958-9559977 MsG0880042496.01.T01:intron 40.0%
TCAACAGCAGAAACTGAGAA+AGG - Chr8:9563635-9563654 MsG0880042496.01.T01:intron 40.0%
TCAAGTATGGGATCAACAGT+AGG + Chr8:9563695-9563714 None:intergenic 40.0%
TGACATTGATCTTGTAGGGA+AGG - Chr8:9559909-9559928 MsG0880042496.01.T01:intron 40.0%
TGAGATGACACACAGCAATA+AGG + Chr8:9562960-9562979 None:intergenic 40.0%
TGTAGCGCTAAGTGTATGTT+TGG + Chr8:9559794-9559813 None:intergenic 40.0%
TGTTATTCGCATGCTTGCAT+GGG - Chr8:9562247-9562266 MsG0880042496.01.T01:intron 40.0%
TTCTCAGTTTCTGCTGTTGA+AGG + Chr8:9563635-9563654 None:intergenic 40.0%
! AATTACGTACGTGAGTTGAG+AGG + Chr8:9559028-9559047 None:intergenic 40.0%
! GAATAGTGGCTTCCTTTTCT+TGG - Chr8:9562282-9562301 MsG0880042496.01.T01:intron 40.0%
! GCATCTAAGTTGGAGAAGAT+AGG - Chr8:9559968-9559987 MsG0880042496.01.T01:intron 40.0%
! TTCGGTTTTCTCTTGTGGTT+CGG - Chr8:9561362-9561381 MsG0880042496.01.T01:intron 40.0%
! TTGTTATTCGCATGCTTGCA+TGG - Chr8:9562246-9562265 MsG0880042496.01.T01:intron 40.0%
!! ATGTTTGGTTCCACTTTTGG+AGG - Chr8:9559515-9559534 MsG0880042496.01.T01:intron 40.0%
!! TAACCAGTTTGGTTTGGTTC+AGG - Chr8:9561320-9561339 MsG0880042496.01.T01:intron 40.0%
!! TTAACGGATTGTGCTTCTTC+TGG - Chr8:9561647-9561666 MsG0880042496.01.T01:intron 40.0%
!!! TTTGGTTCGGTTTTCTCTTG+TGG - Chr8:9561357-9561376 MsG0880042496.01.T01:intron 40.0%
AAAAGGGAGGAAAGCTACAG+AGG + Chr8:9561422-9561441 None:intergenic 45.0%
AAATATTAGTGTCGTGGCGG+TGG - Chr8:9559424-9559443 MsG0880042496.01.T01:intron 45.0%
AAGCGAAGTAATCGAAGACG+AGG + Chr8:9558936-9558955 None:intergenic 45.0%
AATCTCTTGGCCCTGTGAAA+AGG + Chr8:9563208-9563227 None:intergenic 45.0%
AATGTCGATGTGTCAGTGTC+CGG + Chr8:9559372-9559391 None:intergenic 45.0%
ACGATGTGATGGTTAGCACT+TGG - Chr8:9560677-9560696 MsG0880042496.01.T01:intron 45.0%
AGAAGCCCTACGGTTAGAAA+TGG + Chr8:9562752-9562771 None:intergenic 45.0%
ATGTTATGCCCGGAACAATG+CGG + Chr8:9562557-9562576 None:intergenic 45.0%
CACCCTATTCTTCACATGCT+TGG - Chr8:9562593-9562612 MsG0880042496.01.T01:intron 45.0%
CAGCTTGTCCTCCTAACTAT+AGG - Chr8:9563412-9563431 MsG0880042496.01.T01:CDS 45.0%
CCACTCAGAAAGGAAGGATT+AGG + Chr8:9563165-9563184 None:intergenic 45.0%
CCTAATCCTTCCTTTCTGAG+TGG - Chr8:9563162-9563181 MsG0880042496.01.T01:intron 45.0%
CCTCAACAATGGAAAAAGGG+AGG + Chr8:9561435-9561454 None:intergenic 45.0%
GAACATGAGAGGCTGACTAA+GGG + Chr8:9562496-9562515 None:intergenic 45.0%
GAAGCATATTCCGGTCATGT+CGG + Chr8:9558872-9558891 None:intergenic 45.0%
GACCTGCACATGAAGAATAG+AGG + Chr8:9562641-9562660 None:intergenic 45.0%
GACTACAATTCCGGAACCAA+AGG - Chr8:9561691-9561710 MsG0880042496.01.T01:intron 45.0%
GCAGGACCTTGATCAAGTAT+GGG + Chr8:9563707-9563726 None:intergenic 45.0%
GCGCTACATACATACCTTGT+AGG - Chr8:9559806-9559825 MsG0880042496.01.T01:intron 45.0%
GTGGATGATGAGAACGCATT+CGG + Chr8:9558999-9559018 None:intergenic 45.0%
GTTATTCGCATGCTTGCATG+GGG - Chr8:9562248-9562267 MsG0880042496.01.T01:intron 45.0%
GTTCTTCCACTCAGAAAGGA+AGG + Chr8:9563171-9563190 None:intergenic 45.0%
TACAATTCCGGAACCAAAGG+CGG - Chr8:9561694-9561713 MsG0880042496.01.T01:intron 45.0%
TCACCTGAACCAAACCAAAC+TGG + Chr8:9561326-9561345 None:intergenic 45.0%
TCAGTTTCTGCTGTTGAAGG+TGG + Chr8:9563632-9563651 None:intergenic 45.0%
TGAACATGAGAGGCTGACTA+AGG + Chr8:9562497-9562516 None:intergenic 45.0%
TGAGTATTCCGACTCCTCAT+TGG - Chr8:9562773-9562792 MsG0880042496.01.T01:CDS 45.0%
TGCAGGACCTTGATCAAGTA+TGG + Chr8:9563708-9563727 None:intergenic 45.0%
TTAGGAGGACAAGCTGTGTT+GGG + Chr8:9563408-9563427 None:intergenic 45.0%
TTTGCAAACTGTGGCAAGCA+AGG - Chr8:9561493-9561512 MsG0880042496.01.T01:intron 45.0%
! ACATACCCTTCTGGAAATGG+TGG + Chr8:9563608-9563627 None:intergenic 45.0%
! AGAAATCGCCGTGACTTTTG+TGG + Chr8:9561992-9562011 None:intergenic 45.0%
! CCTCCCTTTTTCCATTGTTG+AGG - Chr8:9561432-9561451 MsG0880042496.01.T01:intron 45.0%
! GAAATCGCCGTGACTTTTGT+GGG + Chr8:9561991-9562010 None:intergenic 45.0%
! GATTAAGGGCCCGTTTGTTA+AGG + Chr8:9561249-9561268 None:intergenic 45.0%
! GGAACATACCCTTCTGGAAA+TGG + Chr8:9563611-9563630 None:intergenic 45.0%
! TACTTCGAGTTTCCCTGTTG+TGG - Chr8:9562308-9562327 MsG0880042496.01.T01:intron 45.0%
! TCGGTTTTCTCTTGTGGTTC+GGG - Chr8:9561363-9561382 MsG0880042496.01.T01:intron 45.0%
!! CAACAAGAACGTGGATTGGA+AGG + Chr8:9561582-9561601 None:intergenic 45.0%
!! GAGTGAGTGGCCTTAGTTTT+TGG - Chr8:9560795-9560814 MsG0880042496.01.T01:intron 45.0%
!!! AAAATTTTAATAAAAAAGAA+AGG - Chr8:9561854-9561873 MsG0880042496.01.T01:intron 5.0%
!!! AAATTTTAATAAAAAAGAAA+GGG - Chr8:9561855-9561874 MsG0880042496.01.T01:intron 5.0%
AAAGGTCCACAGCCACACTA+TGG + Chr8:9560184-9560203 None:intergenic 50.0%
AAGACGAGGTTACGATCGAG+TGG + Chr8:9558922-9558941 None:intergenic 50.0%
AAGGTCCACAGCCACACTAT+GGG + Chr8:9560183-9560202 None:intergenic 50.0%
AATGCGGTGAACAGTGTGCT+CGG + Chr8:9562541-9562560 None:intergenic 50.0%
ACAGTGTGCTCGGGGAAAAA+AGG + Chr8:9562531-9562550 None:intergenic 50.0%
ACTGTTCACCGCATTGTTCC+GGG - Chr8:9562546-9562565 MsG0880042496.01.T01:intron 50.0%
ACTTGTATGGCAGCCACAAC+AGG + Chr8:9562324-9562343 None:intergenic 50.0%
AGACGAGGTTACGATCGAGT+GGG + Chr8:9558921-9558940 None:intergenic 50.0%
ATTGTCTCCTTAGCCGCCTT+TGG + Chr8:9561710-9561729 None:intergenic 50.0%
CACTGTTCACCGCATTGTTC+CGG - Chr8:9562545-9562564 MsG0880042496.01.T01:intron 50.0%
CAGCTGCTTCCTGAGTTTCA+GGG + Chr8:9563661-9563680 None:intergenic 50.0%
CAGTGTGCTCGGGGAAAAAA+GGG + Chr8:9562530-9562549 None:intergenic 50.0%
CCGGGAATGGGAATGTTAGA+CGG - Chr8:9558817-9558836 MsG0880042496.01.T01:three_prime_UTR 50.0%
CCGTCTAACATTCCCATTCC+CGG + Chr8:9558820-9558839 None:intergenic 50.0%
CTTGTATGGCAGCCACAACA+GGG + Chr8:9562323-9562342 None:intergenic 50.0%
GAAGGTGGAACATACCCTTC+TGG + Chr8:9563617-9563636 None:intergenic 50.0%
GCTGTGTTGGGTAAAACCTC+TGG + Chr8:9563396-9563415 None:intergenic 50.0%
GGAATGGGAATGTTAGACGG+CGG - Chr8:9558820-9558839 MsG0880042496.01.T01:three_prime_UTR 50.0%
GTCAGTGTCCGGTCTACATA+AGG + Chr8:9559361-9559380 None:intergenic 50.0%
GTTAGGAGGACAAGCTGTGT+TGG + Chr8:9563409-9563428 None:intergenic 50.0%
TCAACTCACCTTGCGTTGCA+AGG + Chr8:9561774-9561793 None:intergenic 50.0%
TCAGCTGCTTCCTGAGTTTC+AGG + Chr8:9563662-9563681 None:intergenic 50.0%
TCTTGCTTCCTTGCAACGCA+AGG - Chr8:9561763-9561782 MsG0880042496.01.T01:intron 50.0%
TGAGAAAGGCCCTGAAACTC+AGG - Chr8:9563649-9563668 MsG0880042496.01.T01:intron 50.0%
TGTTGTGGCTGCCATACAAG+TGG - Chr8:9562323-9562342 MsG0880042496.01.T01:intron 50.0%
TTGCGCTTGCGTTGCAATTG+TGG - Chr8:9560130-9560149 MsG0880042496.01.T01:intron 50.0%
TTTCGCAGCTGCAACTTCGA+GGG - Chr8:9562357-9562376 MsG0880042496.01.T01:intron 50.0%
! GTGAGTTGAGAGGAATCGAG+TGG + Chr8:9559018-9559037 None:intergenic 50.0%
! TACCCTTCTGGAAATGGTGG+CGG + Chr8:9563605-9563624 None:intergenic 50.0%
! TCACAGCACTGAGAGAGAAC+CGG - Chr8:9558777-9558796 MsG0880042496.01.T01:three_prime_UTR 50.0%
ATGCGGTGAACAGTGTGCTC+GGG + Chr8:9562540-9562559 None:intergenic 55.0%
CTCCGCCACCATTTCCAGAA+GGG - Chr8:9563600-9563619 MsG0880042496.01.T01:CDS 55.0%
CTCGGGGAAAAAAGGGCTCT+GGG + Chr8:9562523-9562542 None:intergenic 55.0%
CTTTCGCAGCTGCAACTTCG+AGG - Chr8:9562356-9562375 MsG0880042496.01.T01:intron 55.0%
GATGTCAACGGCCCATAGTG+TGG - Chr8:9560169-9560188 MsG0880042496.01.T01:intron 55.0%
GGAGGAAAGCTACAGAGGCT+AGG + Chr8:9561417-9561436 None:intergenic 55.0%
GTCCACTGCACTTCGCTACA+CGG - Chr8:9563974-9563993 MsG0880042496.01.T01:five_prime_UTR 55.0%
TCGGGGAAAAAAGGGCTCTG+GGG + Chr8:9562522-9562541 None:intergenic 55.0%
! CTCTGGGGGTTGAACATGAG+AGG + Chr8:9562507-9562526 None:intergenic 55.0%
! TCCTTAGCCGCCTTTGGTTC+CGG + Chr8:9561704-9561723 None:intergenic 55.0%
!! ATTCCGGTCATGTCGGTTCC+CGG + Chr8:9558865-9558884 None:intergenic 55.0%
AACGGCCCATAGTGTGGCTG+TGG - Chr8:9560175-9560194 MsG0880042496.01.T01:intron 60.0%
CACTGAGAGAGAACCGGTGC+CGG - Chr8:9558783-9558802 MsG0880042496.01.T01:three_prime_UTR 60.0%
CAGGTGCGGCATGTTATGCC+CGG + Chr8:9562567-9562586 None:intergenic 60.0%
CCTCCGCCACCATTTCCAGA+AGG - Chr8:9563599-9563618 MsG0880042496.01.T01:CDS 60.0%
GAAGAATAGGGTGCGCGTGC+AGG + Chr8:9562586-9562605 None:intergenic 60.0%
GAGATGGCGACACCGGGAAT+GGG - Chr8:9558805-9558824 MsG0880042496.01.T01:three_prime_UTR 60.0%
GCTCGGGGAAAAAAGGGCTC+TGG + Chr8:9562524-9562543 None:intergenic 60.0%
GTCCGTGTAGCGAAGTGCAG+TGG + Chr8:9563979-9563998 None:intergenic 60.0%
GTCGCAGCTCACCGAAGTCT+AGG + Chr8:9560468-9560487 None:intergenic 60.0%
TCCGGAACCAAAGGCGGCTA+AGG - Chr8:9561700-9561719 MsG0880042496.01.T01:intron 60.0%
TGCGGTGAACAGTGTGCTCG+GGG + Chr8:9562539-9562558 None:intergenic 60.0%
TTCGGGTACGCCTTCCCGAA+AGG + Chr8:9563780-9563799 None:intergenic 60.0%
! CGGGGAAAAAAGGGCTCTGG+GGG + Chr8:9562521-9562540 None:intergenic 60.0%
! GGGAAGGCGTACCCGAAAGA+TGG - Chr8:9563783-9563802 MsG0880042496.01.T01:CDS 60.0%
!! ATTCCCGGTGTCGCCATCTC+CGG + Chr8:9558805-9558824 None:intergenic 60.0%
!! CCTTCTGGAAATGGTGGCGG+AGG + Chr8:9563602-9563621 None:intergenic 60.0%
!! GTTAGACGGCGGAGTACCGA+CGG - Chr8:9558831-9558850 MsG0880042496.01.T01:three_prime_UTR 60.0%
!! TCTGGAAATGGTGGCGGAGG+CGG + Chr8:9563599-9563618 None:intergenic 60.0%
ATAGGGTGCGCGTGCAGGTG+CGG + Chr8:9562581-9562600 None:intergenic 65.0%
CCACCGGGAACCGACATGAC+CGG - Chr8:9558859-9558878 MsG0880042496.01.T01:three_prime_UTR 65.0%
GGAGATGGCGACACCGGGAA+TGG - Chr8:9558804-9558823 MsG0880042496.01.T01:three_prime_UTR 65.0%
! GAGAGAACCGGTGCCGGAGA+TGG - Chr8:9558789-9558808 MsG0880042496.01.T01:three_prime_UTR 65.0%
!! AGTACCGACGGCGCAACCAC+CGG - Chr8:9558843-9558862 MsG0880042496.01.T01:three_prime_UTR 65.0%
GTGCCGGAGATGGCGACACC+GGG - Chr8:9558799-9558818 MsG0880042496.01.T01:three_prime_UTR 70.0%
GTTCCCGGTGGTTGCGCCGT+CGG + Chr8:9558850-9558869 None:intergenic 70.0%
! GGTGCCGGAGATGGCGACAC+CGG - Chr8:9558798-9558817 MsG0880042496.01.T01:three_prime_UTR 70.0%
! GGTGTCGCCATCTCCGGCAC+CGG + Chr8:9558799-9558818 None:intergenic 70.0%
! GTACCGACGGCGCAACCACC+GGG - Chr8:9558844-9558863 MsG0880042496.01.T01:three_prime_UTR 70.0%
!! AATGGTGGCGGAGGCGGAGC+AGG + Chr8:9563593-9563612 None:intergenic 70.0%
!! CCGGTCATGTCGGTTCCCGG+TGG + Chr8:9558862-9558881 None:intergenic 70.0%
!!! GGTGGCGGAGGCGGAGCAGG+TGG + Chr8:9563590-9563609 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
Chr8 gene 9558748 9564004 9558748 ID=MsG0880042496.01;Name=MsG0880042496.01
Chr8 mRNA 9558748 9564004 9558748 ID=MsG0880042496.01.T01;Parent=MsG0880042496.01;Name=MsG0880042496.01.T01;_AED=0.49;_eAED=0.49;_QI=60|0.75|0.8|1|0.75|0.8|5|259|267
Chr8 exon 9558748 9559168 9558748 ID=MsG0880042496.01.T01:exon:2573;Parent=MsG0880042496.01.T01
Chr8 exon 9560968 9561077 9560968 ID=MsG0880042496.01.T01:exon:2572;Parent=MsG0880042496.01.T01
Chr8 exon 9562757 9562826 9562757 ID=MsG0880042496.01.T01:exon:2571;Parent=MsG0880042496.01.T01
Chr8 exon 9563389 9563620 9563389 ID=MsG0880042496.01.T01:exon:2570;Parent=MsG0880042496.01.T01
Chr8 exon 9563715 9564004 9563715 ID=MsG0880042496.01.T01:exon:2569;Parent=MsG0880042496.01.T01
Chr8 five_prime_UTR 9563945 9564004 9563945 ID=MsG0880042496.01.T01:five_prime_utr;Parent=MsG0880042496.01.T01
Chr8 CDS 9563715 9563944 9563715 ID=MsG0880042496.01.T01:cds;Parent=MsG0880042496.01.T01
Chr8 CDS 9563389 9563620 9563389 ID=MsG0880042496.01.T01:cds;Parent=MsG0880042496.01.T01
Chr8 CDS 9562757 9562826 9562757 ID=MsG0880042496.01.T01:cds;Parent=MsG0880042496.01.T01
Chr8 CDS 9560968 9561077 9560968 ID=MsG0880042496.01.T01:cds;Parent=MsG0880042496.01.T01
Chr8 CDS 9559007 9559168 9559007 ID=MsG0880042496.01.T01:cds;Parent=MsG0880042496.01.T01
Chr8 three_prime_UTR 9558748 9559006 9558748 ID=MsG0880042496.01.T01:three_prime_utr;Parent=MsG0880042496.01.T01
Gene Sequence

>MsG0880042496.01.T01

ATGGCGACACCGGGAATGGGAATGTTAGACGGCGGAGTACCGACGGCGCAACCACCGGGAACCGACATGACCGGAATATGCTTCAGAGATCAATTATGGTTAAACACATACCCACTCGATCGTAACCTCGTCTTCGATTACTTCGCTTTATCACCTTTCTACGATTGGACTTCTAACAACGAACAACTCCGAATGCGTTCTCATCATCCACTCGATTCCTCTCAACTCACGAAAATGATTGGTATAGAATATGTGTTGAGTGAAGTTATGGAACCTCATCTTTTTATCATGAAGAAGCAGAAGAGGGATAGTCCTGATAAAGTTACTCCAATGCTTGCTTATTATATTTTGGATGGTTCTATTTATCAAGCTCCTCAATTATCCAATGTTTTTGCTGCTAGAATTGTATGTTCAATTTCTTTCTTATTACCATCTTTTCTAATTTTATTCAACAAACCTTATGGAAGGGCACTATATTATATTGAAAAGGCATTTACTACAGCTGCATCTAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAACGAGACTACAATTCCGGAACCAAAGGCGGCTAAGGAGACAATTGACTTAAAAGAAATTAAGCGAGTGGATCATATTCTTGCTTCCTTGCAACGCAAGCTTCCACCTGCTCCGCCTCCGCCACCATTTCCAGAAGGGTATGTTCCACCTTCAACAGCAGAAACTGAGAAAGGCCCTGAAACTCAGGAAGCAGCTGAGTCACTAGCACCTACTGTTGATCCCATACTTGATCAAGGTCCTGCAAAAAGAATGAAATTTTGA
Protein sequence

>MsG0880042496.01.T01

MATPGMGMLDGGVPTAQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSHHPLDSSQLTKMIGIEYVLSEVMEPHLFIMKKQKRDSPDKVTPMLAYYILDGSIYQAPQLSNVFAARIVCSISFLLPSFLILFNKPYGRALYYIEKAFTTAASKLEKIGYVDSENETTIPEPKAAKETIDLKEIKRVDHILASLQRKLPPAPPPPPFPEGYVPPSTAETEKGPETQEAAESLAPTVDPILDQGPAKRMKF*