AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042593.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042593.01.T01 MTR_8g017500 83.974 312 31 4 77 378 46 348 0.0 511
MsG0880042593.01.T01 MTR_8g017540 84.566 311 31 4 77 378 92 394 2.54e-177 499
MsG0880042593.01.T01 MTR_8g017440 71.474 312 61 8 77 377 46 340 3.95e-135 389
MsG0880042593.01.T01 MTR_8g017390 73.413 252 55 8 77 320 47 294 1.08e-108 327
MsG0880042593.01.T01 MTR_8g017390 51.366 183 56 8 184 352 295 458 9.78e-35 133
MsG0880042593.01.T01 MTR_8g017340 62.373 295 90 9 77 353 47 338 9.77e-105 317
MsG0880042593.01.T01 MTR_8g017340 47.186 231 81 11 168 377 281 491 7.16e-36 137
MsG0880042593.01.T01 MTR_8g017470 80.184 217 28 4 172 378 1 212 2.63e-103 304
MsG0880042593.01.T01 MTR_8g017350 62.373 295 90 9 77 353 47 338 7.52e-103 317
MsG0880042593.01.T01 MTR_8g017350 49.268 205 64 10 168 352 281 465 6.51e-35 135
MsG0880042593.01.T01 MTR_8g017350 47.977 173 60 7 216 377 489 642 1.50e-25 108
MsG0880042593.01.T01 MTR_2g099740 48.802 334 107 18 77 354 46 371 4.59e-67 218
MsG0880042593.01.T01 MTR_2g064160 77.632 76 17 0 77 152 45 120 2.69e-37 137
MsG0880042593.01.T01 MTR_1g112760 76.316 76 18 0 77 152 47 122 1.24e-36 133
MsG0880042593.01.T01 MTR_4g105130 76.316 76 18 0 77 152 46 121 3.05e-36 135
MsG0880042593.01.T01 MTR_3g077110 76.316 76 18 0 77 152 46 121 1.29e-35 133
MsG0880042593.01.T01 MTR_2g097910 77.465 71 16 0 77 147 54 124 4.27e-35 131
MsG0880042593.01.T01 MTR_7g110830 73.684 76 20 0 77 152 46 121 4.37e-35 132
MsG0880042593.01.T01 MTR_1g085040 73.684 76 20 0 77 152 46 121 6.37e-35 132
MsG0880042593.01.T01 MTR_4g065017 78.873 71 15 0 77 147 51 121 8.04e-35 131
MsG0880042593.01.T01 MTR_1g085640 73.684 76 20 0 77 152 46 121 2.05e-34 131
MsG0880042593.01.T01 MTR_3g028740 78.873 71 15 0 77 147 56 126 2.06e-34 130
MsG0880042593.01.T01 MTR_8g098860 72.973 74 20 0 77 150 46 119 1.41e-33 127
MsG0880042593.01.T01 MTR_8g095390 68.421 76 24 0 77 152 46 121 1.93e-33 127
MsG0880042593.01.T01 MTR_3g097450 61.111 90 32 1 63 152 35 121 3.71e-32 123
MsG0880042593.01.T01 MTR_7g111290 58.333 120 39 3 77 185 4 123 4.39e-32 124
MsG0880042593.01.T01 MTR_7g076740 51.724 116 45 3 63 171 36 147 7.34e-32 122
MsG0880042593.01.T01 MTR_7g115650 60.714 84 33 0 77 160 46 129 9.58e-32 119
MsG0880042593.01.T01 MTR_2g089450 69.014 71 22 0 77 147 46 116 1.52e-31 120
MsG0880042593.01.T01 MTR_7g111290 58.333 120 39 3 77 185 46 165 1.76e-31 123
MsG0880042593.01.T01 MTR_5g007370 69.444 72 22 0 77 148 46 117 2.00e-31 121
MsG0880042593.01.T01 MTR_5g029840 63.158 76 28 0 77 152 46 121 2.01e-31 122
MsG0880042593.01.T01 MTR_4g073420 58.889 90 34 1 63 152 35 121 3.08e-31 120
MsG0880042593.01.T01 MTR_5g079670 67.105 76 25 0 77 152 45 120 3.40e-31 118
MsG0880042593.01.T01 MTR_1g100667 60.440 91 33 1 69 159 42 129 3.79e-31 119
MsG0880042593.01.T01 MTR_3g074520 69.444 72 22 0 77 148 46 117 4.04e-31 121
MsG0880042593.01.T01 MTR_4g091490 58.889 90 34 1 63 152 36 122 4.08e-31 121
MsG0880042593.01.T01 MTR_2g011660 64.474 76 27 0 77 152 47 122 8.76e-31 120
MsG0880042593.01.T01 MTR_2g034790 62.791 86 29 1 63 148 35 117 1.06e-30 120
MsG0880042593.01.T01 MTR_4g485530 68.421 76 24 0 77 152 46 121 1.69e-30 115
MsG0880042593.01.T01 MTR_2g089620 63.158 76 28 0 77 152 46 121 2.25e-30 119
MsG0880042593.01.T01 MTR_4g478180 66.667 72 24 0 77 148 47 118 2.89e-30 119
MsG0880042593.01.T01 MTR_1g100653 67.606 71 23 0 77 147 46 116 3.15e-30 117
MsG0880042593.01.T01 MTR_5g010020 73.846 65 17 0 77 141 46 110 3.43e-30 119
MsG0880042593.01.T01 MTR_8g031360 64.474 76 27 0 77 152 48 123 3.63e-30 117
MsG0880042593.01.T01 MTR_6g012690 58.889 90 34 1 63 152 35 121 6.75e-30 118
MsG0880042593.01.T01 MTR_4g082290 47.967 123 59 2 45 165 15 134 8.74e-30 119
MsG0880042593.01.T01 MTR_4g121460 68.056 72 23 0 77 148 46 117 1.12e-29 117
MsG0880042593.01.T01 MTR_1g017000 55.056 89 40 0 77 165 47 135 1.23e-29 115
MsG0880042593.01.T01 MTR_4g125520 66.197 71 24 0 77 147 46 116 1.36e-29 116
MsG0880042593.01.T01 MTR_0251s0050 63.380 71 26 0 77 147 47 117 1.92e-29 115
MsG0880042593.01.T01 MTR_1g076150 66.197 71 24 0 77 147 46 116 2.77e-29 114
MsG0880042593.01.T01 MTR_4g100720 44.444 126 60 2 21 146 1 116 3.75e-29 111
MsG0880042593.01.T01 MTR_6g055910 65.823 79 26 1 77 154 19 97 4.59e-29 113
MsG0880042593.01.T01 MTR_6g055910 60.674 89 32 1 69 157 43 128 4.66e-29 114
MsG0880042593.01.T01 MTR_3g065440 69.014 71 22 0 77 147 46 116 4.75e-29 115
MsG0880042593.01.T01 MTR_5g078140 69.014 71 22 0 77 147 46 116 4.78e-29 115
MsG0880042593.01.T01 MTR_7g011170 57.778 90 35 1 63 152 35 121 5.01e-29 115
MsG0880042593.01.T01 MTR_2g089420 50.877 114 49 2 77 184 45 157 5.08e-29 117
MsG0880042593.01.T01 MTR_4g102380 64.474 76 27 0 77 152 46 121 6.03e-29 114
MsG0880042593.01.T01 MTR_1g043050 62.500 72 27 0 77 148 46 117 6.05e-29 113
MsG0880042593.01.T01 MTR_8g027345 57.647 85 36 0 77 161 46 130 1.05e-28 114
MsG0880042593.01.T01 MTR_3g461490 60.920 87 31 1 66 152 38 121 1.49e-28 114
MsG0880042593.01.T01 MTR_3g052450 65.278 72 25 0 75 146 72 143 1.96e-28 116
MsG0880042593.01.T01 MTR_6g006030 64.000 75 27 0 77 151 48 122 1.99e-28 110
MsG0880042593.01.T01 MTR_7g035075 64.789 71 25 0 77 147 48 118 2.02e-28 110
MsG0880042593.01.T01 MTR_4g082230 56.180 89 39 0 77 165 46 134 2.14e-28 115
MsG0880042593.01.T01 MTR_1g110460 56.471 85 37 0 77 161 60 144 2.27e-28 113
MsG0880042593.01.T01 MTR_8g020490 39.583 144 82 1 77 220 42 180 2.39e-28 111
MsG0880042593.01.T01 MTR_0008s0390 64.286 70 25 0 77 146 47 116 2.65e-28 112
MsG0880042593.01.T01 MTR_3g052430 67.143 70 23 0 77 146 75 144 2.94e-28 116
MsG0880042593.01.T01 MTR_1g043080 61.111 72 28 0 77 148 46 117 4.61e-28 110
MsG0880042593.01.T01 MTR_4g063100 49.020 102 51 1 45 146 10 110 6.91e-28 110
MsG0880042593.01.T01 MTR_7g117730 58.442 77 32 0 77 153 46 122 7.77e-28 110
MsG0880042593.01.T01 MTR_8g042410 65.714 70 24 0 77 146 71 140 9.36e-28 114
MsG0880042593.01.T01 MTR_2g067420 58.427 89 31 3 55 141 28 112 1.05e-27 111
MsG0880042593.01.T01 MTR_7g010210 57.647 85 33 1 63 147 35 116 1.24e-27 111
MsG0880042593.01.T01 MTR_7g010210 57.647 85 33 1 63 147 35 116 1.35e-27 110
MsG0880042593.01.T01 MTR_4g063100 60.274 73 29 0 74 146 9 81 2.48e-27 108
MsG0880042593.01.T01 MTR_3g011610 63.380 71 26 0 77 147 71 141 2.91e-27 113
MsG0880042593.01.T01 MTR_0197s0010 61.972 71 27 0 77 147 35 105 4.57e-27 107
MsG0880042593.01.T01 MTR_7g096930 61.972 71 27 0 77 147 46 116 4.93e-27 108
MsG0880042593.01.T01 MTR_0008s0470 61.429 70 27 0 77 146 47 116 5.47e-27 108
MsG0880042593.01.T01 MTR_1g073170 64.286 70 25 0 77 146 54 123 6.76e-27 107
MsG0880042593.01.T01 MTR_6g009430 40.559 143 79 2 77 219 46 182 7.76e-27 109
MsG0880042593.01.T01 MTR_3g083540 59.211 76 31 0 77 152 75 150 8.49e-27 108
MsG0880042593.01.T01 MTR_1g086510 62.857 70 26 0 77 146 55 124 1.05e-26 107
MsG0880042593.01.T01 MTR_1g045610 65.714 70 24 0 77 146 55 124 1.26e-26 107
MsG0880042593.01.T01 MTR_3g103570 57.333 75 32 0 75 149 45 119 2.00e-26 108
MsG0880042593.01.T01 MTR_1g021230 62.857 70 26 0 77 146 91 160 2.50e-26 109
MsG0880042593.01.T01 MTR_5g014990 56.579 76 33 0 75 150 45 120 5.08e-26 106
MsG0880042593.01.T01 MTR_0140s0030 56.471 85 34 1 63 147 36 117 5.34e-26 107
MsG0880042593.01.T01 MTR_0489s0020 56.471 85 34 1 63 147 36 117 5.34e-26 107
MsG0880042593.01.T01 MTR_0008s0280 60.870 69 27 0 77 145 46 114 5.66e-26 104
MsG0880042593.01.T01 MTR_1g017140 58.667 75 31 0 75 149 45 119 5.78e-26 107
MsG0880042593.01.T01 MTR_5g042030 60.526 76 30 0 77 152 41 116 6.26e-26 105
MsG0880042593.01.T01 MTR_6g090405 50.000 96 45 1 69 164 42 134 6.77e-26 105
MsG0880042593.01.T01 MTR_3g039990 55.294 85 35 1 63 147 36 117 8.87e-26 106
MsG0880042593.01.T01 MTR_7g087130 55.294 85 35 1 63 147 35 116 2.41e-25 105
MsG0880042593.01.T01 MTR_7g109320 54.639 97 36 1 77 173 46 134 2.75e-25 105
MsG0880042593.01.T01 MTR_4g057635 57.534 73 31 0 77 149 47 119 3.21e-25 104
MsG0880042593.01.T01 MTR_7g102110 58.667 75 31 0 75 149 45 119 3.26e-25 103
MsG0880042593.01.T01 MTR_1g062940 43.689 103 57 1 45 147 9 110 3.42e-25 102
MsG0880042593.01.T01 MTR_1g086530 58.571 70 29 0 77 146 67 136 3.93e-25 103
MsG0880042593.01.T01 MTR_7g017260 57.500 80 31 1 71 150 58 134 9.08e-25 102
MsG0880042593.01.T01 MTR_5g079120 53.571 84 36 1 69 152 90 170 9.17e-25 103
MsG0880042593.01.T01 MTR_2g096380 56.944 72 31 0 75 146 19 90 9.54e-25 100
MsG0880042593.01.T01 MTR_5g078910 58.904 73 30 0 77 149 41 113 1.00e-24 102
MsG0880042593.01.T01 MTR_6g012180 60.274 73 26 1 69 141 41 110 1.51e-24 102
MsG0880042593.01.T01 MTR_0063s0090 58.824 68 28 0 77 144 46 113 2.10e-24 100
MsG0880042593.01.T01 MTR_2g096380 58.571 70 29 0 77 146 40 109 2.96e-24 100
MsG0880042593.01.T01 MTR_5g078800 58.333 72 30 0 77 148 41 112 3.35e-24 100
MsG0880042593.01.T01 MTR_2g088170 65.714 70 24 0 77 146 63 132 3.45e-24 103
MsG0880042593.01.T01 MTR_5g079290 53.947 76 35 0 77 152 51 126 4.76e-24 100
MsG0880042593.01.T01 MTR_0001s0360 40.136 147 53 4 77 203 41 172 4.77e-24 100
MsG0880042593.01.T01 MTR_5g079220 56.757 74 32 0 77 150 55 128 1.27e-23 99.4
MsG0880042593.01.T01 MTR_4g097570 63.636 66 24 0 75 140 45 110 1.45e-23 99.8
MsG0880042593.01.T01 MTR_0247s0040 55.422 83 34 1 62 144 29 108 1.95e-23 96.3
MsG0880042593.01.T01 MTR_4g097570 62.121 66 25 0 75 140 46 111 2.22e-23 99.0
MsG0880042593.01.T01 MTR_0193s0090 52.874 87 38 1 62 148 29 112 4.16e-23 96.3
MsG0880042593.01.T01 MTR_5g078930 36.686 169 81 5 77 228 43 202 4.50e-23 96.7
MsG0880042593.01.T01 MTR_2g095520 60.000 65 26 0 77 141 47 111 8.29e-23 98.2
MsG0880042593.01.T01 MTR_8g006470 52.326 86 36 2 65 145 28 113 1.10e-22 97.1
MsG0880042593.01.T01 MTR_4g128670 58.209 67 28 0 75 141 45 111 1.48e-22 97.8
MsG0880042593.01.T01 MTR_5g078860 50.000 86 40 1 63 148 30 112 2.69e-22 96.3
MsG0880042593.01.T01 MTR_5g078950 52.439 82 36 1 63 144 30 108 3.18e-22 95.1
MsG0880042593.01.T01 MTR_8g060940 59.701 67 27 0 77 143 41 107 3.30e-22 94.7
MsG0880042593.01.T01 MTR_1g083630 58.571 70 29 0 77 146 46 115 3.59e-22 98.6
MsG0880042593.01.T01 MTR_2g033170 60.870 69 27 0 77 145 58 126 1.92e-21 94.4
MsG0880042593.01.T01 MTR_4g029540 51.765 85 36 2 66 145 29 113 3.08e-21 93.2
MsG0880042593.01.T01 MTR_4g128190 52.857 70 32 1 77 145 32 101 3.81e-21 91.7
MsG0880042593.01.T01 MTR_3g463400 52.941 68 32 0 79 146 166 233 4.64e-21 94.7
MsG0880042593.01.T01 MTR_5g088080 44.792 96 47 3 77 171 46 136 8.48e-21 91.3
MsG0880042593.01.T01 MTR_5g088150 44.792 96 47 3 77 171 46 136 8.48e-21 91.3
MsG0880042593.01.T01 MTR_5g488210 44.792 96 47 3 77 171 46 136 8.48e-21 91.3
MsG0880042593.01.T01 MTR_5g488170 44.792 96 47 3 77 171 46 136 1.06e-20 90.5
MsG0880042593.01.T01 MTR_5g088640 44.792 96 47 3 77 171 46 136 1.28e-20 90.9
MsG0880042593.01.T01 MTR_4g019370 57.353 68 29 0 79 146 71 138 2.94e-20 91.3
MsG0880042593.01.T01 MTR_4g123040 59.420 69 28 0 77 145 58 126 3.42e-20 90.5
MsG0880042593.01.T01 MTR_1g057980 39.837 123 54 2 79 181 113 235 3.77e-20 90.1
MsG0880042593.01.T01 MTR_5g070020 37.097 124 68 3 24 146 108 222 3.91e-20 90.9
MsG0880042593.01.T01 MTR_3g045430 40.441 136 70 4 36 170 16 141 7.43e-20 89.4
MsG0880042593.01.T01 MTR_7g035350 54.545 66 30 0 79 144 258 323 1.83e-19 90.1
MsG0880042593.01.T01 MTR_5g016510 31.863 204 112 6 79 276 38 220 1.86e-19 88.6
MsG0880042593.01.T01 MTR_7g451170 48.529 68 35 0 79 146 224 291 2.36e-19 89.4
MsG0880042593.01.T01 MTR_4g088015 50.746 67 33 0 79 145 254 320 2.80e-19 89.4
MsG0880042593.01.T01 MTR_3g101290 58.824 68 28 0 79 146 70 137 3.18e-19 85.9
MsG0880042593.01.T01 MTR_5g062790 50.000 70 34 1 77 145 43 112 3.28e-19 87.4
MsG0880042593.01.T01 MTR_7g037260 51.471 68 33 0 79 146 178 245 3.59e-19 88.2
MsG0880042593.01.T01 MTR_5g049190 50.000 68 34 0 79 146 52 119 5.12e-19 85.9
MsG0880042593.01.T01 MTR_7g061330 53.623 69 32 0 79 147 146 214 1.13e-18 88.2
MsG0880042593.01.T01 MTR_7g461410 53.623 69 32 0 79 147 146 214 1.13e-18 88.2
MsG0880042593.01.T01 MTR_4g094982 53.521 71 33 0 79 149 38 108 1.23e-18 85.5
MsG0880042593.01.T01 MTR_7g061330 53.623 69 32 0 79 147 110 178 1.65e-18 87.4
MsG0880042593.01.T01 MTR_6g074860 45.556 90 43 1 79 162 37 126 1.69e-18 84.3
MsG0880042593.01.T01 MTR_4g105660 48.529 68 35 0 79 146 213 280 2.35e-18 86.7
MsG0880042593.01.T01 MTR_6g015455 36.765 136 85 1 79 214 38 172 2.42e-18 87.4
MsG0880042593.01.T01 MTR_3g110028 48.611 72 37 0 79 150 118 189 2.73e-18 87.4
MsG0880042593.01.T01 MTR_3g077650 48.529 68 35 0 79 146 214 281 6.06e-18 85.5
MsG0880042593.01.T01 MTR_1g026870 47.222 72 38 0 79 150 118 189 1.42e-17 85.1
MsG0880042593.01.T01 MTR_4g082040 51.471 68 33 0 79 146 138 205 2.02e-17 83.6
MsG0880042593.01.T01 MTR_5g041570 50.000 68 34 0 79 146 167 234 3.84e-17 82.8
MsG0880042593.01.T01 MTR_5g082910 53.846 65 30 0 79 143 52 116 4.09e-17 81.3
MsG0880042593.01.T01 MTR_5g088610 48.571 70 35 1 77 145 43 112 5.27e-17 82.0
MsG0880042593.01.T01 MTR_6g027340 38.298 94 46 1 79 160 49 142 7.85e-17 79.0
MsG0880042593.01.T01 MTR_7g450950 41.892 74 41 1 79 152 190 261 2.72e-16 79.7
MsG0880042593.01.T01 MTR_6g027360 50.820 61 30 0 79 139 111 171 3.03e-16 79.0
MsG0880042593.01.T01 MTR_7g037130 48.485 66 34 0 79 144 178 243 6.30e-16 78.6
MsG0880042593.01.T01 MTR_5g007300 67.442 43 14 0 77 119 98 140 8.38e-15 71.2
MsG0880042593.01.T01 MTR_3g089045 50.000 68 34 0 79 146 49 116 1.41e-14 73.9
MsG0880042593.01.T01 MTR_7g086960 47.059 68 36 0 79 146 122 189 2.07e-14 74.3
MsG0880042593.01.T01 MTR_6g027370 41.772 79 44 1 79 157 132 208 2.29e-14 73.9
MsG0880042593.01.T01 MTR_5g010650 37.805 82 49 1 59 140 125 204 9.17e-14 72.8
MsG0880042593.01.T01 MTR_5g038910 45.588 68 37 0 79 146 59 126 1.25e-13 72.4
MsG0880042593.01.T01 MTR_1g085880 50.000 70 34 1 77 145 46 115 1.51e-13 69.3
MsG0880042593.01.T01 MTR_5g038910 45.588 68 37 0 79 146 59 126 1.73e-13 71.6
MsG0880042593.01.T01 MTR_1g085770 50.000 70 34 1 77 145 46 115 3.10e-13 70.1
MsG0880042593.01.T01 MTR_6g055910 56.364 55 23 1 101 154 2 56 8.52e-13 67.4
MsG0880042593.01.T01 MTR_8g468380 46.575 73 38 1 82 154 58 129 2.76e-12 68.2
MsG0880042593.01.T01 MTR_4g063100 58.140 43 18 0 104 146 4 46 3.68e-12 65.1
MsG0880042593.01.T01 MTR_7g061550 42.188 64 37 0 77 140 41 104 4.57e-12 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042593.01.T01 AT3G13890 75.758 99 16 2 77 168 46 143 1.15e-41 150
MsG0880042593.01.T01 AT3G13890 75.758 99 16 2 77 168 55 152 1.88e-41 149
MsG0880042593.01.T01 AT3G12720 76.316 76 18 0 77 152 56 131 2.13e-37 137
MsG0880042593.01.T01 AT1G09540 66.667 96 25 1 77 165 46 141 1.68e-36 136
MsG0880042593.01.T01 AT4G01680 62.105 95 29 1 77 164 46 140 3.87e-36 132
MsG0880042593.01.T01 AT5G26660 74.359 78 20 0 75 152 13 90 7.18e-36 133
MsG0880042593.01.T01 AT5G12870 80.282 71 14 0 77 147 52 122 1.51e-35 131
MsG0880042593.01.T01 AT1G57560 75.000 76 19 0 77 152 46 121 1.58e-35 131
MsG0880042593.01.T01 AT1G57560 75.000 76 19 0 77 152 46 121 2.03e-35 132
MsG0880042593.01.T01 AT4G01680 62.105 95 29 1 77 164 46 140 2.91e-35 132
MsG0880042593.01.T01 AT4G01680 62.105 95 29 1 77 164 58 152 4.89e-35 132
MsG0880042593.01.T01 AT5G26660 75.000 76 19 0 77 152 46 121 7.90e-35 131
MsG0880042593.01.T01 AT3G08500 80.282 71 14 0 77 147 64 134 1.07e-33 128
MsG0880042593.01.T01 AT1G63910 76.056 71 17 0 77 147 46 116 4.25e-33 127
MsG0880042593.01.T01 AT1G22640 61.111 90 32 1 63 152 35 121 1.01e-32 123
MsG0880042593.01.T01 AT2G16720 62.222 90 31 1 63 152 35 121 1.14e-32 124
MsG0880042593.01.T01 AT4G09460 67.105 76 25 0 77 152 46 121 1.89e-32 122
MsG0880042593.01.T01 AT5G54230 67.105 76 25 0 77 152 46 121 9.81e-32 122
MsG0880042593.01.T01 AT4G21440 40.116 172 75 4 45 201 15 173 2.42e-31 122
MsG0880042593.01.T01 AT4G34990 65.789 76 26 0 77 152 46 121 2.93e-31 120
MsG0880042593.01.T01 AT4G05100 56.250 96 39 1 57 152 30 122 4.35e-31 120
MsG0880042593.01.T01 AT4G38620 64.474 76 27 0 77 152 46 121 5.49e-31 119
MsG0880042593.01.T01 AT1G35515 62.025 79 30 0 74 152 43 121 8.30e-31 117
MsG0880042593.01.T01 AT5G65230 68.056 72 23 0 77 148 46 117 9.26e-31 119
MsG0880042593.01.T01 AT3G27810 56.977 86 37 0 75 160 3 88 1.07e-30 115
MsG0880042593.01.T01 AT3G61250 64.474 76 27 0 77 152 46 121 1.09e-30 119
MsG0880042593.01.T01 AT5G15310 55.102 98 43 1 77 174 46 142 1.28e-30 117
MsG0880042593.01.T01 AT3G01140 36.508 189 97 5 77 243 46 233 1.41e-30 120
MsG0880042593.01.T01 AT4G12350 65.789 76 26 0 77 152 46 121 1.74e-30 118
MsG0880042593.01.T01 AT4G17785 63.158 76 28 0 77 152 47 122 2.13e-30 119
MsG0880042593.01.T01 AT4G17785 63.158 76 28 0 77 152 47 122 2.19e-30 119
MsG0880042593.01.T01 AT5G15310 55.102 98 43 1 77 174 46 142 2.55e-30 119
MsG0880042593.01.T01 AT5G15310 55.102 98 43 1 77 174 46 142 2.87e-30 118
MsG0880042593.01.T01 AT3G01140 43.624 149 68 3 77 209 89 237 3.03e-30 120
MsG0880042593.01.T01 AT5G49330 63.291 79 29 0 77 155 46 124 3.75e-30 119
MsG0880042593.01.T01 AT3G02940 63.158 76 28 0 77 152 46 121 4.07e-30 117
MsG0880042593.01.T01 AT3G02940 63.158 76 28 0 77 152 46 121 6.05e-30 117
MsG0880042593.01.T01 AT3G02940 63.158 76 28 0 77 152 46 121 6.05e-30 117
MsG0880042593.01.T01 AT4G22680 65.789 76 26 0 77 152 46 121 6.37e-30 116
MsG0880042593.01.T01 AT5G62320 63.158 76 28 0 77 152 54 129 7.94e-30 115
MsG0880042593.01.T01 AT3G27810 57.143 84 36 0 77 160 54 137 8.96e-30 114
MsG0880042593.01.T01 AT5G14750 62.667 75 28 0 77 151 50 124 9.34e-30 114
MsG0880042593.01.T01 AT3G01530 59.494 79 30 1 77 153 59 137 1.18e-29 114
MsG0880042593.01.T01 AT3G11440 67.143 70 23 0 77 146 75 144 1.25e-29 119
MsG0880042593.01.T01 AT1G34670 65.789 76 26 0 77 152 46 121 1.35e-29 117
MsG0880042593.01.T01 AT3G27920 53.933 89 41 0 77 165 48 136 1.88e-29 114
MsG0880042593.01.T01 AT5G14750 63.014 73 27 0 79 151 18 90 1.92e-29 112
MsG0880042593.01.T01 AT5G56110 60.920 87 31 1 66 152 38 121 2.49e-29 116
MsG0880042593.01.T01 AT5G10280 66.667 72 24 0 77 148 46 117 2.52e-29 116
MsG0880042593.01.T01 AT4G28110 60.526 76 30 0 77 152 46 121 2.67e-29 115
MsG0880042593.01.T01 AT3G11440 67.143 70 23 0 77 146 75 144 2.81e-29 119
MsG0880042593.01.T01 AT3G11440 67.143 70 23 0 77 146 75 144 2.81e-29 119
MsG0880042593.01.T01 AT3G11440 67.143 70 23 0 77 146 75 144 2.81e-29 119
MsG0880042593.01.T01 AT5G40350 63.514 74 27 0 75 148 4 77 2.97e-29 111
MsG0880042593.01.T01 AT5G06100 68.571 70 22 0 77 146 66 135 3.19e-29 118
MsG0880042593.01.T01 AT5G16770 55.556 90 37 1 63 152 35 121 3.28e-29 115
MsG0880042593.01.T01 AT5G16770 55.556 90 37 1 63 152 35 121 3.28e-29 115
MsG0880042593.01.T01 AT1G66230 65.789 76 26 0 77 152 46 121 3.34e-29 114
MsG0880042593.01.T01 AT5G14340 70.423 71 21 0 77 147 58 128 3.68e-29 114
MsG0880042593.01.T01 AT5G16770 45.669 127 66 1 77 203 46 169 3.95e-29 115
MsG0880042593.01.T01 AT5G16770 45.669 127 66 1 77 203 46 169 3.95e-29 115
MsG0880042593.01.T01 AT5G06100 68.571 70 22 0 77 146 66 135 6.18e-29 118
MsG0880042593.01.T01 AT5G06100 68.571 70 22 0 77 146 66 135 6.18e-29 118
MsG0880042593.01.T01 AT5G06100 68.571 70 22 0 77 146 66 135 6.18e-29 118
MsG0880042593.01.T01 AT5G06100 68.571 70 22 0 77 146 66 135 6.18e-29 118
MsG0880042593.01.T01 AT5G35550 66.197 71 24 0 77 147 51 121 1.22e-28 112
MsG0880042593.01.T01 AT2G47460 67.606 71 23 0 77 147 46 116 1.23e-28 115
MsG0880042593.01.T01 AT5G07700 60.526 76 30 0 77 152 46 121 1.46e-28 114
MsG0880042593.01.T01 AT5G07700 60.526 76 30 0 77 152 46 121 1.46e-28 114
MsG0880042593.01.T01 AT2G26960 63.768 69 25 0 77 145 54 122 1.58e-28 115
MsG0880042593.01.T01 AT5G40350 52.747 91 43 0 77 167 51 141 1.65e-28 111
MsG0880042593.01.T01 AT5G40330 63.380 71 26 0 77 147 46 116 1.79e-28 111
MsG0880042593.01.T01 AT1G18570 52.000 100 41 1 77 169 47 146 1.81e-28 114
MsG0880042593.01.T01 AT5G16600 67.105 76 25 0 77 152 46 121 1.96e-28 114
MsG0880042593.01.T01 AT1G74430 61.842 76 29 0 77 152 46 121 2.15e-28 112
MsG0880042593.01.T01 AT5G35550 66.197 71 24 0 77 147 48 118 2.27e-28 112
MsG0880042593.01.T01 AT3G23250 63.380 71 26 0 77 147 46 116 3.12e-28 112
MsG0880042593.01.T01 AT5G60890 60.526 76 30 0 77 152 46 121 3.34e-28 112
MsG0880042593.01.T01 AT5G52260 66.667 78 23 1 69 146 41 115 4.95e-28 111
MsG0880042593.01.T01 AT2G31180 66.197 71 24 0 77 147 46 116 5.51e-28 110
MsG0880042593.01.T01 AT3G13540 59.211 76 31 0 77 152 57 132 5.98e-28 110
MsG0880042593.01.T01 AT1G16490 63.014 73 27 0 77 149 48 120 6.55e-28 111
MsG0880042593.01.T01 AT1G79180 35.610 205 106 7 59 251 31 221 7.53e-28 111
MsG0880042593.01.T01 AT5G07690 59.211 76 31 0 77 152 46 121 7.99e-28 112
MsG0880042593.01.T01 AT1G06180 64.789 71 25 0 77 147 46 116 1.01e-27 109
MsG0880042593.01.T01 AT1G56160 64.789 71 25 0 77 147 48 118 1.16e-27 110
MsG0880042593.01.T01 AT5G61420 57.895 76 32 0 77 152 46 121 1.34e-27 112
MsG0880042593.01.T01 AT1G79180 36.216 185 97 5 77 251 81 254 3.07e-27 110
MsG0880042593.01.T01 AT5G52600 67.143 70 23 0 77 146 46 115 3.34e-27 107
MsG0880042593.01.T01 AT3G48920 61.972 71 27 0 77 147 52 122 3.48e-27 108
MsG0880042593.01.T01 AT1G68320 54.118 85 39 0 77 161 53 137 4.65e-27 108
MsG0880042593.01.T01 AT4G26930 62.319 69 26 0 77 145 53 121 7.22e-27 110
MsG0880042593.01.T01 AT1G48000 58.974 78 30 1 77 152 66 143 8.67e-27 107
MsG0880042593.01.T01 AT3G62610 60.811 74 29 0 77 150 46 119 9.47e-27 109
MsG0880042593.01.T01 AT1G18710 57.895 76 32 0 77 152 46 121 9.97e-27 107
MsG0880042593.01.T01 AT3G12820 59.722 72 29 0 79 150 2 73 1.01e-26 105
MsG0880042593.01.T01 AT3G47600 58.667 75 31 0 73 147 36 110 1.29e-26 108
MsG0880042593.01.T01 AT3G12820 59.459 74 30 0 77 150 48 121 1.54e-26 106
MsG0880042593.01.T01 AT1G25340 54.217 83 38 0 77 159 52 134 2.02e-26 107
MsG0880042593.01.T01 AT4G25560 64.103 78 25 1 69 146 39 113 2.09e-26 107
MsG0880042593.01.T01 AT5G55020 61.972 71 27 0 77 147 60 130 2.60e-26 110
MsG0880042593.01.T01 AT2G32460 54.878 82 31 1 77 152 52 133 3.90e-26 109
MsG0880042593.01.T01 AT4G37780 57.333 75 32 0 75 149 45 119 3.93e-26 107
MsG0880042593.01.T01 AT3G28910 57.647 85 33 1 63 147 35 116 4.06e-26 107
MsG0880042593.01.T01 AT3G47600 56.471 85 34 1 63 147 35 116 4.42e-26 107
MsG0880042593.01.T01 AT2G32460 54.878 82 31 1 77 152 40 121 4.46e-26 109
MsG0880042593.01.T01 AT5G62470 45.968 124 56 2 66 181 38 158 4.62e-26 107
MsG0880042593.01.T01 AT5G57620 56.579 76 33 0 75 150 45 120 5.08e-26 107
MsG0880042593.01.T01 AT3G49690 58.108 74 31 0 75 148 45 118 6.05e-26 106
MsG0880042593.01.T01 AT5G23000 58.333 72 30 0 77 148 47 118 6.05e-26 107
MsG0880042593.01.T01 AT3G46130 59.211 76 31 0 71 146 5 80 6.10e-26 104
MsG0880042593.01.T01 AT1G74650 52.000 100 41 2 63 158 35 131 6.40e-26 107
MsG0880042593.01.T01 AT2G47190 57.143 70 30 0 77 146 54 123 6.51e-26 105
MsG0880042593.01.T01 AT3G30210 62.319 69 26 0 77 145 61 129 6.77e-26 105
MsG0880042593.01.T01 AT1G08810 53.933 89 38 1 63 151 35 120 7.32e-26 105
MsG0880042593.01.T01 AT5G65790 58.108 74 31 0 75 148 45 118 8.15e-26 107
MsG0880042593.01.T01 AT5G59780 61.111 72 28 0 75 146 19 90 8.33e-26 103
MsG0880042593.01.T01 AT1G74080 60.526 76 30 0 77 152 46 121 8.37e-26 106
MsG0880042593.01.T01 AT3G28470 69.231 65 20 0 77 141 46 110 9.31e-26 106
MsG0880042593.01.T01 AT4G13480 64.286 70 25 0 77 146 40 109 1.43e-25 104
MsG0880042593.01.T01 AT3G46130 61.111 72 28 0 75 146 19 90 1.50e-25 103
MsG0880042593.01.T01 AT3G24310 63.014 73 27 0 77 149 52 124 1.62e-25 104
MsG0880042593.01.T01 AT5G59780 61.429 70 27 0 77 146 42 111 2.59e-25 103
MsG0880042593.01.T01 AT3G46130 61.429 70 27 0 77 146 43 112 4.77e-25 102
MsG0880042593.01.T01 AT3G53200 58.333 72 30 0 75 146 8 79 4.86e-25 101
MsG0880042593.01.T01 AT5G62470 46.847 111 51 1 79 181 47 157 5.28e-25 104
MsG0880042593.01.T01 AT1G25340 49.438 89 45 0 71 159 41 129 5.73e-25 103
MsG0880042593.01.T01 AT1G66370 44.737 114 57 2 69 182 37 144 7.69e-25 102
MsG0880042593.01.T01 AT1G25340 49.438 89 45 0 71 159 41 129 1.29e-24 102
MsG0880042593.01.T01 AT3G53200 58.571 70 29 0 77 146 43 112 2.54e-24 100
MsG0880042593.01.T01 AT2G36890 54.795 73 33 0 77 149 47 119 3.19e-24 101
MsG0880042593.01.T01 AT2G36890 54.795 73 33 0 77 149 88 160 4.82e-24 102
MsG0880042593.01.T01 AT3G60460 48.544 103 44 3 48 145 16 114 5.69e-23 98.2
MsG0880042593.01.T01 AT1G22640 60.938 64 25 0 89 152 1 64 6.33e-23 95.5
MsG0880042593.01.T01 AT3G06490 62.319 69 26 0 77 145 53 121 4.09e-22 96.3
MsG0880042593.01.T01 AT1G66380 59.459 74 30 0 73 146 5 78 4.55e-22 90.5
MsG0880042593.01.T01 AT5G49620 60.870 69 27 0 77 145 60 128 1.79e-21 94.0
MsG0880042593.01.T01 AT2G26950 55.932 59 26 0 83 141 56 114 2.07e-20 92.0
MsG0880042593.01.T01 AT5G40360 40.909 110 56 3 79 187 191 292 2.10e-20 92.0
MsG0880042593.01.T01 AT5G14750 57.143 63 27 0 89 151 1 63 2.70e-20 86.7
MsG0880042593.01.T01 AT5G14750 57.143 63 27 0 89 151 1 63 2.70e-20 86.7
MsG0880042593.01.T01 AT1G66380 61.429 70 27 0 77 146 42 111 3.56e-20 86.3
MsG0880042593.01.T01 AT4G18770 46.154 78 42 0 79 156 250 327 8.64e-20 90.9
MsG0880042593.01.T01 AT3G55730 58.824 68 28 0 79 146 89 156 1.53e-19 89.7
MsG0880042593.01.T01 AT3G23250 57.627 59 25 0 89 147 1 59 2.28e-19 86.7
MsG0880042593.01.T01 AT1G66390 47.115 104 50 2 45 146 11 111 2.85e-19 86.7
MsG0880042593.01.T01 AT3G09230 50.000 82 41 0 79 160 88 169 3.17e-19 89.0
MsG0880042593.01.T01 AT1G56650 56.410 78 31 1 69 146 37 111 3.44e-19 86.7
MsG0880042593.01.T01 AT5G11050 52.941 68 32 0 79 146 138 205 3.83e-19 89.0
MsG0880042593.01.T01 AT2G39880 57.353 68 29 0 79 146 83 150 4.38e-19 88.2
MsG0880042593.01.T01 AT5G58850 51.471 68 33 0 79 146 138 205 7.26e-19 88.2
MsG0880042593.01.T01 AT2G25230 46.269 67 36 0 79 145 59 125 9.80e-19 84.7
MsG0880042593.01.T01 AT1G69560 37.500 112 57 2 79 189 140 239 9.89e-19 86.7
MsG0880042593.01.T01 AT1G71030 52.113 71 34 0 82 152 5 75 1.17e-18 83.2
MsG0880042593.01.T01 AT1G69560 37.500 112 57 2 79 189 156 255 1.27e-18 86.7
MsG0880042593.01.T01 AT3G27785 48.529 68 35 0 79 146 222 289 1.45e-18 87.4
MsG0880042593.01.T01 AT1G71030 52.113 71 34 0 82 152 19 89 1.51e-18 83.6
MsG0880042593.01.T01 AT5G67300 53.425 73 34 0 79 151 39 111 3.65e-18 84.7
MsG0880042593.01.T01 AT5G49620 50.602 83 27 1 77 145 60 142 4.69e-18 84.7
MsG0880042593.01.T01 AT4G37260 52.941 68 32 0 79 146 46 113 6.00e-18 84.3
MsG0880042593.01.T01 AT3G50060 45.882 85 46 0 79 163 39 123 1.12e-17 83.2
MsG0880042593.01.T01 AT1G18960 47.945 73 36 1 75 147 39 109 1.25e-17 83.2
MsG0880042593.01.T01 AT5G11510 47.222 72 38 0 79 150 114 185 1.37e-17 85.1
MsG0880042593.01.T01 AT5G11510 47.222 72 38 0 79 150 114 185 1.37e-17 85.1
MsG0880042593.01.T01 AT5G11510 47.222 72 38 0 79 150 114 185 1.37e-17 85.1
MsG0880042593.01.T01 AT5G11510 47.222 72 38 0 79 150 114 185 1.90e-17 84.7
MsG0880042593.01.T01 AT5G11510 47.222 72 38 0 79 150 114 185 2.04e-17 84.7
MsG0880042593.01.T01 AT4G32730 41.573 89 49 1 65 150 103 191 2.59e-17 84.3
MsG0880042593.01.T01 AT5G02320 49.275 69 35 0 79 147 160 228 2.68e-17 84.0
MsG0880042593.01.T01 AT5G02320 49.275 69 35 0 79 147 160 228 2.68e-17 84.0
MsG0880042593.01.T01 AT3G09370 51.471 68 33 0 79 146 163 230 2.74e-17 83.6
MsG0880042593.01.T01 AT3G09370 51.471 68 33 0 79 146 168 235 2.75e-17 83.6
MsG0880042593.01.T01 AT4G32730 45.833 72 39 0 79 150 120 191 2.85e-17 84.3
MsG0880042593.01.T01 AT4G32730 45.833 72 39 0 79 150 120 191 2.85e-17 84.3
MsG0880042593.01.T01 AT4G32730 45.833 72 39 0 79 150 120 191 2.85e-17 84.3
MsG0880042593.01.T01 AT4G32730 45.833 72 39 0 79 150 120 191 2.85e-17 84.3
MsG0880042593.01.T01 AT5G02320 49.275 69 35 0 79 147 100 168 2.89e-17 83.6
MsG0880042593.01.T01 AT1G26780 47.222 72 38 0 79 150 131 202 2.91e-17 81.6
MsG0880042593.01.T01 AT1G26780 47.222 72 38 0 79 150 131 202 3.18e-17 82.4
MsG0880042593.01.T01 AT3G09370 51.471 68 33 0 79 146 176 243 3.99e-17 83.2
MsG0880042593.01.T01 AT2G23290 52.941 68 32 0 79 146 46 113 5.10e-17 81.3
MsG0880042593.01.T01 AT4G33450 45.679 81 41 1 79 156 52 132 8.47e-16 77.0
MsG0880042593.01.T01 AT1G17950 48.529 68 35 0 79 146 38 105 1.25e-15 76.3
MsG0880042593.01.T01 AT5G40430 43.284 67 38 0 79 145 86 152 1.83e-15 75.9
MsG0880042593.01.T01 AT3G29020 46.377 69 37 0 79 147 100 168 3.99e-15 75.9
MsG0880042593.01.T01 AT3G29020 46.377 69 37 0 79 147 98 166 4.33e-15 74.3
MsG0880042593.01.T01 AT1G73410 43.529 85 45 1 65 146 22 106 7.66e-15 73.9
MsG0880042593.01.T01 AT5G17800 44.286 70 39 0 77 146 124 193 1.41e-14 74.3
MsG0880042593.01.T01 AT1G73410 43.529 85 45 1 65 146 22 106 1.46e-14 72.4
MsG0880042593.01.T01 AT4G00540 44.928 69 38 0 79 147 139 207 1.88e-14 74.7
MsG0880042593.01.T01 AT4G00540 44.928 69 38 0 79 147 137 205 2.94e-14 74.3
MsG0880042593.01.T01 AT1G14350 45.588 68 37 0 79 146 58 125 6.95e-14 73.2
MsG0880042593.01.T01 AT1G14350 45.588 68 37 0 79 146 58 125 6.95e-14 73.2
MsG0880042593.01.T01 AT2G02820 45.588 68 37 0 79 146 63 130 7.14e-14 73.2
MsG0880042593.01.T01 AT2G02820 45.588 68 37 0 79 146 63 130 7.80e-14 73.2
MsG0880042593.01.T01 AT2G02820 45.588 68 37 0 79 146 63 130 8.57e-14 72.0
MsG0880042593.01.T01 AT5G59780 58.140 43 18 0 104 146 4 46 5.47e-12 64.3
MsG0880042593.01.T01 AT1G14350 48.333 60 31 0 87 146 23 82 6.07e-12 67.0
MsG0880042593.01.T01 AT1G14350 48.333 60 31 0 87 146 23 82 6.07e-12 67.0
MsG0880042593.01.T01 AT3G46130 58.140 43 18 0 104 146 4 46 7.45e-12 64.3
MsG0880042593.01.T01 AT2G37630 34.343 99 62 2 77 175 38 133 7.84e-12 66.6
MsG0880042593.01.T01 AT4G25560 60.000 45 18 0 102 146 3 47 1.02e-11 64.3

Find 93 sgRNAs with CRISPR-Local

Find 257 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTGCATTAATTTGTTAAA+TGG 0.113682 8:+11156645 None:intergenic
TAATAGGATTTGTGACAATT+TGG 0.209295 8:+11156373 None:intergenic
ACATTAGGGTTTGCATTTAA+AGG 0.226411 8:+11156936 None:intergenic
CTTTGATGATTGACTAATTT+AGG 0.238046 8:+11156579 None:intergenic
TGAAAATTACCTTGCTGATT+TGG 0.271724 8:+11156864 None:intergenic
CGCAGGAGCTTCATGTTCTT+GGG 0.306972 8:+11156515 None:intergenic
GATTTGGAGATAAGGTTAAA+TGG 0.309651 8:+11156880 None:intergenic
TCGCAGGAGCTTCATGTTCT+TGG 0.310466 8:+11156514 None:intergenic
TTTCCATTGAACCAATATTA+TGG 0.312267 8:+11156967 None:intergenic
ATCCTATTATTTCTTTAAGA+TGG 0.312486 8:-11156359 MsG0880042593.01.T01:CDS
AATTGATTAGCTTCCACATT+TGG 0.313476 8:+11156450 None:intergenic
ACCTCATTATCTGTTCTTCC+AGG 0.316676 8:+11157083 None:intergenic
GTAGAACTACACAACATTCT+AGG 0.317521 8:-11158075 MsG0880042593.01.T01:CDS
AAACTTCCTCGTTTCAAATC+AGG 0.322148 8:+11158123 None:intergenic
GTTGCATTAATTTGTTAAAT+GGG 0.333510 8:+11156646 None:intergenic
CTCCCAGTACGGTGTGGTTA+GGG 0.338320 8:-11159590 MsG0880042593.01.T01:CDS
TAAGTAGAAGGATTAGATAT+TGG 0.340112 8:+11156753 None:intergenic
TCTCCCAGTACGGTGTGGTT+AGG 0.356547 8:-11159591 MsG0880042593.01.T01:CDS
TTGAAGTTGAGGATTACATT+AGG 0.357952 8:+11156921 None:intergenic
TCCCATCTTAAAGAAATAAT+AGG 0.361549 8:+11156357 None:intergenic
CATTAGGGTTTGCATTTAAA+GGG 0.372421 8:+11156937 None:intergenic
TGAAGTTGAGGATTACATTA+GGG 0.376844 8:+11156922 None:intergenic
CTTGGGAATTAGATGAATCT+AGG 0.387566 8:+11156532 None:intergenic
ACCTTGCTGATTTGGAGATA+AGG 0.391565 8:+11156872 None:intergenic
ATATGATCAATATCATGATT+TGG 0.401830 8:-11156622 MsG0880042593.01.T01:CDS
TACGAAAGGTTCCCGCCAAT+TGG 0.405732 8:-11159498 MsG0880042593.01.T01:CDS
TTCCCCTAACCACACCGTAC+TGG 0.422504 8:+11159587 None:intergenic
AAATGTGGAAGCTAATCAAT+TGG 0.426350 8:-11156448 MsG0880042593.01.T01:CDS
CTACCATAATATTGGTTCAA+TGG 0.428122 8:-11156970 MsG0880042593.01.T01:CDS
CGGATAGTGCCCGTTCCAAT+TGG 0.428453 8:+11159483 None:intergenic
CGGATAGTGCCCGTTCCAAC+TGG 0.436083 8:+11159962 None:intergenic
ATAAGGTTAAATGGTCTTGA+TGG 0.436192 8:+11156889 None:intergenic
GCTTCCACATTTGGATCTTG+TGG 0.436359 8:+11156459 None:intergenic
TCCTATTATTTCTTTAAGAT+GGG 0.449818 8:-11156358 MsG0880042593.01.T01:CDS
AGGTTCCCGCCAATTGGAAC+GGG 0.457015 8:-11159492 MsG0880042593.01.T01:CDS
AGGTTCCCGCCAGTTGGAAC+GGG 0.457015 8:-11159971 MsG0880042593.01.T01:CDS
GAAGGAAATTGGCATTATAA+TGG 0.465893 8:+11156811 None:intergenic
CATTGAACCAATATTATGGT+AGG 0.466526 8:+11156971 None:intergenic
GGGAAGAACCAGGCGGAAGC+TGG 0.469281 8:-11159569 MsG0880042593.01.T01:CDS
AACTCTTTCCACATCTCTGC+AGG 0.469711 8:+11158175 None:intergenic
AAAATTCAGTGCTACACGTC+TGG 0.472206 8:-11156492 MsG0880042593.01.T01:CDS
AAGAACCAGGCGGAAGCTGG+TGG 0.485612 8:-11159566 MsG0880042593.01.T01:CDS
TTGAACCAATATTATGGTAG+GGG 0.489116 8:+11156973 None:intergenic
CATGCCCACCAGCTTCCGCC+TGG 0.497308 8:+11159561 None:intergenic
TCCCCTAACCACACCGTACT+GGG 0.499681 8:+11159588 None:intergenic
CATGTATCTTCATAAGTAGA+AGG 0.503491 8:+11156741 None:intergenic
GAAAGAGTTGCAGATTAAGA+TGG 0.506273 8:-11158161 MsG0880042593.01.T01:CDS
CAGATTGCAAAACACTTACC+TGG 0.507229 8:-11157101 MsG0880042593.01.T01:CDS
GGGAACCTTTCGTATCCAAC+TGG 0.508307 8:+11159507 None:intergenic
GGGAACCTTTCGTATCCAAC+TGG 0.508307 8:+11159986 None:intergenic
ATTGAACCAATATTATGGTA+GGG 0.509251 8:+11156972 None:intergenic
TACACAACATTCTAGGCAAT+AGG 0.509594 8:-11158068 MsG0880042593.01.T01:intron
AAGGTTCCCGCCAGTTGGAA+CGG 0.512793 8:-11159972 MsG0880042593.01.T01:CDS
TACGAAAGGTTCCCGCCAGT+TGG 0.525546 8:-11159977 MsG0880042593.01.T01:CDS
CTTCTACTTATGAAGATACA+TGG 0.531808 8:-11156740 MsG0880042593.01.T01:CDS
ACCTTTCGTATCCAACTGGC+GGG 0.537792 8:+11159511 None:intergenic
ACCTTTCGTATCCAACTGGC+GGG 0.537792 8:+11159990 None:intergenic
TAGTGCCCGTTCCAACTGGC+GGG 0.539181 8:+11159966 None:intergenic
GCTTTCGATATCCCGCCAGT+TGG 0.540877 8:-11160001 MsG0880042593.01.T01:CDS
TAGTGCCCGTTCCAATTGGC+GGG 0.544130 8:+11159487 None:intergenic
AAGGTTCCCGCCAATTGGAA+CGG 0.548542 8:-11159493 MsG0880042593.01.T01:CDS
GGTGATAATGATTGAAGTTG+AGG 0.552293 8:+11156910 None:intergenic
TGTGACAATTTGGCTGCTTG+AGG 0.559773 8:+11156383 None:intergenic
ATAGTGCCCGTTCCAATTGG+CGG 0.561820 8:+11159486 None:intergenic
AGAACCAGGCGGAAGCTGGT+GGG 0.562403 8:-11159565 MsG0880042593.01.T01:CDS
TTGCATTAATTTGTTAAATG+GGG 0.568078 8:+11156647 None:intergenic
GCTTTCAATATCCCGCCAGT+TGG 0.569903 8:-11159522 MsG0880042593.01.T01:CDS
TAACCACACCGTACTGGGAG+AGG 0.574334 8:+11159593 None:intergenic
CTAAGACCTGATTTGAAACG+AGG 0.579582 8:-11158129 MsG0880042593.01.T01:CDS
TCCCAGTACGGTGTGGTTAG+GGG 0.581746 8:-11159589 MsG0880042593.01.T01:CDS
GTGTGGTTAGGGGAAGAACC+AGG 0.588243 8:-11159579 MsG0880042593.01.T01:CDS
ACAATTTGGCTGCTTGAGGA+TGG 0.594031 8:+11156387 None:intergenic
ACCTGGAAGAACAGATAATG+AGG 0.597599 8:-11157084 MsG0880042593.01.T01:CDS
TGCTACAAGCATAATCCTCA+AGG 0.602722 8:+11156556 None:intergenic
GGATATCGAAAGCCACGTCG+TGG 0.608094 8:+11160011 None:intergenic
ATAGTGCCCGTTCCAACTGG+CGG 0.609125 8:+11159965 None:intergenic
AGAGCAGACCTCTCCCAGTA+CGG 0.611198 8:-11159601 MsG0880042593.01.T01:CDS
GGATATTGAAAGCCACGTCG+TGG 0.611574 8:+11159532 None:intergenic
AACCTTTCGTATCCAACTGG+CGG 0.618482 8:+11159510 None:intergenic
AACCTTTCGTATCCAACTGG+CGG 0.618482 8:+11159989 None:intergenic
ACCTTATCTCCAAATCAGCA+AGG 0.624710 8:-11156873 MsG0880042593.01.T01:CDS
GATATTGAAAGCCACGTCGT+GGG 0.625089 8:+11159533 None:intergenic
GATATCGAAAGCCACGTCGT+GGG 0.629384 8:+11160012 None:intergenic
TCCCGCCAGTTGGATACGAA+AGG 0.632564 8:-11159512 MsG0880042593.01.T01:CDS
TCCCGCCAGTTGGATACGAA+AGG 0.632564 8:-11159991 MsG0880042593.01.T01:CDS
AGTCAATCATCAAAGCCTTG+AGG 0.638575 8:-11156571 MsG0880042593.01.T01:CDS
GGTGTGATTATCTGAAAATG+TGG 0.639480 8:+11156995 None:intergenic
TGTGTAGGCCTGCAGAGATG+TGG 0.639487 8:-11158183 MsG0880042593.01.T01:intron
TGAACCAATATTATGGTAGG+GGG 0.649337 8:+11156974 None:intergenic
GGCATGTAACACCCACGACG+TGG 0.666877 8:-11159544 MsG0880042593.01.T01:CDS
TCATCCACAAGATCCAAATG+TGG 0.670513 8:-11156463 MsG0880042593.01.T01:CDS
AGACCTCTCCCAGTACGGTG+TGG 0.691817 8:-11159596 MsG0880042593.01.T01:CDS
TGGTTAGGGGAAGAACCAGG+CGG 0.742426 8:-11159576 MsG0880042593.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATGATATTTTAATGATA+AGG - Chr8:11158783-11158802 MsG0880042593.01.T01:intron 10.0%
!! AAAAATAATAAATTAGAGGT+AGG + Chr8:11158596-11158615 None:intergenic 15.0%
!! AAAAATATTGCAAAACAAAA+GGG - Chr8:11159141-11159160 MsG0880042593.01.T01:intron 15.0%
!! AAGTTGAAATACAATAAATA+AGG - Chr8:11159056-11159075 MsG0880042593.01.T01:intron 15.0%
!! ATAAAAGTAGATAATTACTA+GGG + Chr8:11157616-11157635 None:intergenic 15.0%
!! ATCAAATATATTACAACATA+TGG - Chr8:11158030-11158049 MsG0880042593.01.T01:intron 15.0%
!! TATAAAAGTAGATAATTACT+AGG + Chr8:11157617-11157636 None:intergenic 15.0%
!! TATAATAAGAAGAAAGAAAA+TGG + Chr8:11158146-11158165 None:intergenic 15.0%
!! TGCAAAAAATAATAAATTAG+AGG + Chr8:11158600-11158619 None:intergenic 15.0%
!!! AGTAATTATCTACTTTTATA+AGG - Chr8:11157617-11157636 MsG0880042593.01.T01:intron 15.0%
!!! AGTTTTTGTTTTTTTTTAAG+AGG + Chr8:11158687-11158706 None:intergenic 15.0%
!!! CTAGTAAGTTTTTTTTTTTA+AGG - Chr8:11159019-11159038 MsG0880042593.01.T01:intron 15.0%
!!! TTCAGTTTTTTTTTTTCATA+AGG + Chr8:11157417-11157436 None:intergenic 15.0%
!! ATATGATCAATATCATGATT+TGG - Chr8:11159756-11159775 MsG0880042593.01.T01:intron 20.0%
!! CAAAAATATTGCAAAACAAA+AGG - Chr8:11159140-11159159 MsG0880042593.01.T01:intron 20.0%
!! GCATTAAATTATGAAAAGAA+TGG + Chr8:11157801-11157820 None:intergenic 20.0%
!! GTTCTTGAAAAATTGATAAA+AGG + Chr8:11157672-11157691 None:intergenic 20.0%
!!! AATTGATTTTCTTGATTTAC+TGG + Chr8:11159694-11159713 None:intergenic 20.0%
!!! AGAAAAGATTTTCTTCTTTA+TGG + Chr8:11159341-11159360 None:intergenic 20.0%
!!! ATAAGAATTTACACTTGTTT+TGG - Chr8:11159243-11159262 MsG0880042593.01.T01:intron 20.0%
!!! ATCCTATTATTTCTTTAAGA+TGG - Chr8:11160019-11160038 MsG0880042593.01.T01:CDS 20.0%
!!! GTTGCATTAATTTGTTAAAT+GGG + Chr8:11159735-11159754 None:intergenic 20.0%
!!! TCCTATTATTTCTTTAAGAT+GGG - Chr8:11160020-11160039 MsG0880042593.01.T01:CDS 20.0%
!!! TGTTGCATTAATTTGTTAAA+TGG + Chr8:11159736-11159755 None:intergenic 20.0%
!!! TTGCATTAATTTGTTAAATG+GGG + Chr8:11159734-11159753 None:intergenic 20.0%
!!! TTTGGTGTTATTTTAATAAC+AGG + Chr8:11157889-11157908 None:intergenic 20.0%
!!! TTTGTTTTTTTTTAAGAGGA+CGG + Chr8:11158683-11158702 None:intergenic 20.0%
!!! TTTTCAACAAATTGATACAA+AGG - Chr8:11159531-11159550 MsG0880042593.01.T01:CDS 20.0%
!!! TTTTCAAGAACCTTTATTTT+GGG - Chr8:11157681-11157700 MsG0880042593.01.T01:intron 20.0%
!!! TTTTTCAAGAACCTTTATTT+TGG - Chr8:11157680-11157699 MsG0880042593.01.T01:intron 20.0%
! AATTATTTCCCTATACATCT+AGG - Chr8:11158637-11158656 MsG0880042593.01.T01:intron 25.0%
! AGTAGTTAAGAAGTTTAAAG+TGG + Chr8:11158958-11158977 None:intergenic 25.0%
! ATATGTTAAATCGACATTCA+GGG + Chr8:11158403-11158422 None:intergenic 25.0%
! ATTATTTCCCTATACATCTA+GGG - Chr8:11158638-11158657 MsG0880042593.01.T01:intron 25.0%
! ATTGAACCAATATTATGGTA+GGG + Chr8:11159409-11159428 None:intergenic 25.0%
! GAAGTTCTATCTTCTATATT+TGG + Chr8:11157849-11157868 None:intergenic 25.0%
! TAAGTAGAAGGATTAGATAT+TGG + Chr8:11159628-11159647 None:intergenic 25.0%
! TAATAGGATTTGTGACAATT+TGG + Chr8:11160008-11160027 None:intergenic 25.0%
! TAATGATAAGGTAAGCTTTA+GGG - Chr8:11158795-11158814 MsG0880042593.01.T01:intron 25.0%
! TATATGTTAAATCGACATTC+AGG + Chr8:11158404-11158423 None:intergenic 25.0%
! TATATTACAACATATGGACA+TGG - Chr8:11158036-11158055 MsG0880042593.01.T01:intron 25.0%
! TCAAAATTCAAAAGTTTGTC+TGG - Chr8:11158370-11158389 MsG0880042593.01.T01:intron 25.0%
! TCCCATCTTAAAGAAATAAT+AGG + Chr8:11160024-11160043 None:intergenic 25.0%
! TTAATGATAAGGTAAGCTTT+AGG - Chr8:11158794-11158813 MsG0880042593.01.T01:intron 25.0%
! TTTCCATTGAACCAATATTA+TGG + Chr8:11159414-11159433 None:intergenic 25.0%
!! ATAATGAGGTGAAAAACTTT+TGG - Chr8:11159308-11159327 MsG0880042593.01.T01:intron 25.0%
!! ATTTTGAATGTGAAGGAAAT+TGG + Chr8:11159581-11159600 None:intergenic 25.0%
!! CTTTGATGATTGACTAATTT+AGG + Chr8:11159802-11159821 None:intergenic 25.0%
!! TAACAATGTACAAGCTATTT+TGG + Chr8:11157907-11157926 None:intergenic 25.0%
!! TTTTTAATACCAGCATGTTT+TGG + Chr8:11158078-11158097 None:intergenic 25.0%
!!! ACTGTGGAGTTTTTATTTAA+TGG + Chr8:11157075-11157094 None:intergenic 25.0%
!!! CTGTGGAGTTTTTATTTAAT+GGG + Chr8:11157074-11157093 None:intergenic 25.0%
!!! TCTCATTTTAGGAATTTCAT+TGG - Chr8:11158720-11158739 MsG0880042593.01.T01:intron 25.0%
!!! TTTTTTAAGGAAGAATAGCT+AGG - Chr8:11159032-11159051 MsG0880042593.01.T01:intron 25.0%
AAACTAGTGTTCCTTATGAA+GGG - Chr8:11157248-11157267 MsG0880042593.01.T01:intron 30.0%
AAAGTAGATAATTACTAGGG+TGG + Chr8:11157613-11157632 None:intergenic 30.0%
AAATGTGGAAGCTAATCAAT+TGG - Chr8:11159930-11159949 MsG0880042593.01.T01:intron 30.0%
AACAAACAGAAGGTTAAAAG+AGG - Chr8:11157976-11157995 MsG0880042593.01.T01:intron 30.0%
AAGATGCATCTTGTTGATAT+GGG + Chr8:11156562-11156581 None:intergenic 30.0%
AATAGACACATGGTTTATTG+TGG + Chr8:11157588-11157607 None:intergenic 30.0%
AATTCCTAAAATGAGACTGA+TGG + Chr8:11158716-11158735 None:intergenic 30.0%
ACATTAGGGTTTGCATTTAA+AGG + Chr8:11159445-11159464 None:intergenic 30.0%
AGAAGGTTAAAAGAGGATTA+TGG - Chr8:11157983-11158002 MsG0880042593.01.T01:intron 30.0%
ATAAAGGAATCGAATCACAT+CGG - Chr8:11156937-11156956 MsG0880042593.01.T01:CDS 30.0%
ATTAATTAGCGAAGTTGCTA+CGG + Chr8:11157460-11157479 None:intergenic 30.0%
ATTCGATTCCTTTATTAACG+TGG + Chr8:11156932-11156951 None:intergenic 30.0%
CAAAAGAAACAAGACATCAT+GGG - Chr8:11157937-11157956 MsG0880042593.01.T01:intron 30.0%
CATGTATCTTCATAAGTAGA+AGG + Chr8:11159640-11159659 None:intergenic 30.0%
CATTAGGGTTTGCATTTAAA+GGG + Chr8:11159444-11159463 None:intergenic 30.0%
CATTGAACCAATATTATGGT+AGG + Chr8:11159410-11159429 None:intergenic 30.0%
CTTCTACTTATGAAGATACA+TGG - Chr8:11159638-11159657 MsG0880042593.01.T01:intron 30.0%
GAAGGAAATTGGCATTATAA+TGG + Chr8:11159570-11159589 None:intergenic 30.0%
GAAGGCTTATAAGAATTGTT+AGG - Chr8:11156531-11156550 MsG0880042593.01.T01:CDS 30.0%
GATTTGGAGATAAGGTTAAA+TGG + Chr8:11159501-11159520 None:intergenic 30.0%
TAAACTAGTGTTCCTTATGA+AGG - Chr8:11157247-11157266 MsG0880042593.01.T01:intron 30.0%
TGAAGTTGAGGATTACATTA+GGG + Chr8:11159459-11159478 None:intergenic 30.0%
TTATTAGCCCTAGATGTATA+GGG + Chr8:11158648-11158667 None:intergenic 30.0%
TTCGATTCCTTTATTAACGT+GGG + Chr8:11156931-11156950 None:intergenic 30.0%
TTGAACCAATATTATGGTAG+GGG + Chr8:11159408-11159427 None:intergenic 30.0%
TTGAAGTTGAGGATTACATT+AGG + Chr8:11159460-11159479 None:intergenic 30.0%
! AACAAGATGCATCTTCTTTT+CGG - Chr8:11156567-11156586 MsG0880042593.01.T01:CDS 30.0%
! ATAAGGTTAAATGGTCTTGA+TGG + Chr8:11159492-11159511 None:intergenic 30.0%
! ATGAGTTTTTCATCTTCTTC+AGG + Chr8:11158012-11158031 None:intergenic 30.0%
! ATTGGTTGCACTATATTTTG+TGG + Chr8:11159610-11159629 None:intergenic 30.0%
! GTATTGGATTTTGAATGTGA+AGG + Chr8:11159588-11159607 None:intergenic 30.0%
! TGAAAATTACCTTGCTGATT+TGG + Chr8:11159517-11159536 None:intergenic 30.0%
! TGCACTATATTTTGTGGTAT+TGG + Chr8:11159604-11159623 None:intergenic 30.0%
!! AATTGATTAGCTTCCACATT+TGG + Chr8:11159931-11159950 None:intergenic 30.0%
!! ATTTGGCTTTAGCTTAAGAA+TGG + Chr8:11157832-11157851 None:intergenic 30.0%
!! CTACCATAATATTGGTTCAA+TGG - Chr8:11159408-11159427 MsG0880042593.01.T01:intron 30.0%
!!! ATGTCTTGTTTCTTTTGCAA+TGG + Chr8:11157934-11157953 None:intergenic 30.0%
AAACTTCCTCGTTTCAAATC+AGG + Chr8:11158258-11158277 None:intergenic 35.0%
AAAGTTAAGCGTGCTTAACT+TGG - Chr8:11157096-11157115 MsG0880042593.01.T01:CDS 35.0%
ATATCATGATGTGCATGTGT+AGG - Chr8:11158180-11158199 MsG0880042593.01.T01:intron 35.0%
CTTGGGAATTAGATGAATCT+AGG + Chr8:11159849-11159868 None:intergenic 35.0%
GAAAGAGTTGCAGATTAAGA+TGG - Chr8:11158217-11158236 MsG0880042593.01.T01:intron 35.0%
GAAGATGCATCTTGTTGATA+TGG + Chr8:11156563-11156582 None:intergenic 35.0%
GCAAAAGAAACAAGACATCA+TGG - Chr8:11157936-11157955 MsG0880042593.01.T01:intron 35.0%
GGTGTGATTATCTGAAAATG+TGG + Chr8:11159386-11159405 None:intergenic 35.0%
GTAGAACTACACAACATTCT+AGG - Chr8:11158303-11158322 MsG0880042593.01.T01:intron 35.0%
GTTATTAGCCCTAGATGTAT+AGG + Chr8:11158649-11158668 None:intergenic 35.0%
TACACAACATTCTAGGCAAT+AGG - Chr8:11158310-11158329 MsG0880042593.01.T01:intron 35.0%
TCGATTCCTTTATTAACGTG+GGG + Chr8:11156930-11156949 None:intergenic 35.0%
TGAACCAATATTATGGTAGG+GGG + Chr8:11159407-11159426 None:intergenic 35.0%
TGATCAGAGTAACAGAGAAA+AGG + Chr8:11157776-11157795 None:intergenic 35.0%
TGATGCTAACAAGTGTTCTA+GGG - Chr8:11158818-11158837 MsG0880042593.01.T01:intron 35.0%
! GCTGAAAAGACTTGTTTAGT+CGG - Chr8:11157185-11157204 MsG0880042593.01.T01:intron 35.0%
! GGTGATAATGATTGAAGTTG+AGG + Chr8:11159471-11159490 None:intergenic 35.0%
! TACTCCATCAGTCTCATTTT+AGG - Chr8:11158709-11158728 MsG0880042593.01.T01:intron 35.0%
!! GCTTAACTTGGAGCAATTTT+GGG - Chr8:11157108-11157127 MsG0880042593.01.T01:CDS 35.0%
!! GCTTGACTTGAAGCAATTTT+GGG - Chr8:11156624-11156643 MsG0880042593.01.T01:CDS 35.0%
!! TGCTTAACTTGGAGCAATTT+TGG - Chr8:11157107-11157126 MsG0880042593.01.T01:CDS 35.0%
!! TGCTTGACTTGAAGCAATTT+TGG - Chr8:11156623-11156642 MsG0880042593.01.T01:CDS 35.0%
!!! ACTTGAAGCAATTTTGGGAT+GGG - Chr8:11156629-11156648 MsG0880042593.01.T01:CDS 35.0%
!!! TACACTTGTTTTGGACAGAT+GGG - Chr8:11159252-11159271 MsG0880042593.01.T01:intron 35.0%
!!! TTACACTTGTTTTGGACAGA+TGG - Chr8:11159251-11159270 MsG0880042593.01.T01:intron 35.0%
AAAATTCAGTGCTACACGTC+TGG - Chr8:11159886-11159905 MsG0880042593.01.T01:intron 40.0%
ACAATGGTGGCCCAAAATAA+AGG + Chr8:11157694-11157713 None:intergenic 40.0%
ACCTCATTATCTGTTCTTCC+AGG + Chr8:11159298-11159317 None:intergenic 40.0%
ACCTGGAAGAACAGATAATG+AGG - Chr8:11159294-11159313 MsG0880042593.01.T01:intron 40.0%
ACCTTATCTCCAAATCAGCA+AGG - Chr8:11159505-11159524 MsG0880042593.01.T01:CDS 40.0%
ACTGATTGCGACTGTTAGAA+GGG - Chr8:11158495-11158514 MsG0880042593.01.T01:intron 40.0%
ACTGTGGAGTTCTTATGGAA+TGG + Chr8:11156597-11156616 None:intergenic 40.0%
AGCACGCTTAACTTTAACTG+TGG + Chr8:11157091-11157110 None:intergenic 40.0%
AGTCAATCATCAAAGCCTTG+AGG - Chr8:11159807-11159826 MsG0880042593.01.T01:intron 40.0%
AGTGTTCCTTATGAAGGGAT+GGG - Chr8:11157253-11157272 MsG0880042593.01.T01:intron 40.0%
CAACATATGGACATGGTTGT+TGG - Chr8:11158043-11158062 MsG0880042593.01.T01:intron 40.0%
CAGATTGCAAAACACTTACC+TGG - Chr8:11159277-11159296 MsG0880042593.01.T01:intron 40.0%
CTCTTGTTGCAACAAACAGA+AGG - Chr8:11157966-11157985 MsG0880042593.01.T01:intron 40.0%
CTGTGGAGTTCTTATGGAAT+GGG + Chr8:11156596-11156615 None:intergenic 40.0%
GACACATGGTTTATTGTGGA+TGG + Chr8:11157584-11157603 None:intergenic 40.0%
GCTTAACTGTGGAGTTCTTA+TGG + Chr8:11156602-11156621 None:intergenic 40.0%
GTGATGCTAACAAGTGTTCT+AGG - Chr8:11158817-11158836 MsG0880042593.01.T01:intron 40.0%
GTTAAATCGACATTCAGGGA+GGG + Chr8:11158399-11158418 None:intergenic 40.0%
TAGTGTTCCTTATGAAGGGA+TGG - Chr8:11157252-11157271 MsG0880042593.01.T01:intron 40.0%
TCAATGTGGAAGCTGTACAA+TGG + Chr8:11157710-11157729 None:intergenic 40.0%
TCATCCACAAGATCCAAATG+TGG - Chr8:11159915-11159934 MsG0880042593.01.T01:intron 40.0%
TCGGTTCCACTTATTAACGT+GGG + Chr8:11156452-11156471 None:intergenic 40.0%
TGCTACAAGCATAATCCTCA+AGG + Chr8:11159825-11159844 None:intergenic 40.0%
TGTTAAATCGACATTCAGGG+AGG + Chr8:11158400-11158419 None:intergenic 40.0%
TTCGGTTCCACTTATTAACG+TGG + Chr8:11156453-11156472 None:intergenic 40.0%
! CAGTCTGGGATGTTACAAAA+TGG - Chr8:11156750-11156769 MsG0880042593.01.T01:CDS 40.0%
! CTAAGACCTGATTTGAAACG+AGG - Chr8:11158249-11158268 MsG0880042593.01.T01:intron 40.0%
!! AAAAGACTCGTGTTGGTTTG+TGG - Chr8:11156705-11156724 MsG0880042593.01.T01:CDS 40.0%
!! AAAGACTCGTGTTGGTTTGT+GGG - Chr8:11156706-11156725 MsG0880042593.01.T01:CDS 40.0%
!! AACTTGGAGCAATTTTGGGA+TGG - Chr8:11157112-11157131 MsG0880042593.01.T01:intron 40.0%
!! ACCTTGCTGATTTGGAGATA+AGG + Chr8:11159509-11159528 None:intergenic 40.0%
!! GACTTGAAGCAATTTTGGGA+TGG - Chr8:11156628-11156647 MsG0880042593.01.T01:CDS 40.0%
!!! ACTTGGAGCAATTTTGGGAT+GGG - Chr8:11157113-11157132 MsG0880042593.01.T01:intron 40.0%
AACCTTTCGTATCCAACTGG+CGG + Chr8:11156392-11156411 None:intergenic 45.0%
AACTCTTTCCACATCTCTGC+AGG + Chr8:11158206-11158225 None:intergenic 45.0%
AAGTCAAGCACGCTTAACTG+TGG + Chr8:11156613-11156632 None:intergenic 45.0%
ACAATTTGGCTGCTTGAGGA+TGG + Chr8:11159994-11160013 None:intergenic 45.0%
AGCTCTGTTCCAAAACATGC+TGG - Chr8:11158066-11158085 MsG0880042593.01.T01:intron 45.0%
ATGCTTACCGGAAAACTTCC+CGG + Chr8:11156662-11156681 None:intergenic 45.0%
ATGTGGAAGCTGTACAATGG+TGG + Chr8:11157707-11157726 None:intergenic 45.0%
CACACCCCCTACCATAATAT+TGG - Chr8:11159400-11159419 MsG0880042593.01.T01:intron 45.0%
CATGCTGAAAAGACTCGTGT+TGG - Chr8:11156698-11156717 MsG0880042593.01.T01:CDS 45.0%
CATGTAGTCCCATACCTACA+CGG + Chr8:11156504-11156523 None:intergenic 45.0%
CGAATCACATCGGAATGAGA+GGG - Chr8:11156947-11156966 MsG0880042593.01.T01:CDS 45.0%
CGGTTCCACTTATTAACGTG+GGG + Chr8:11156451-11156470 None:intergenic 45.0%
CTGAGGTGGTGAATTCAATG+TGG + Chr8:11157724-11157743 None:intergenic 45.0%
GACTGATTGCGACTGTTAGA+AGG - Chr8:11158494-11158513 MsG0880042593.01.T01:intron 45.0%
GATATTGAAAGCCACGTCGT+GGG + Chr8:11156848-11156867 None:intergenic 45.0%
GATGACCCCACGTTAATAAG+TGG - Chr8:11156443-11156462 MsG0880042593.01.T01:CDS 45.0%
GCTTCCACATTTGGATCTTG+TGG + Chr8:11159922-11159941 None:intergenic 45.0%
GGATGACCCCACGTTAATAA+AGG - Chr8:11156442-11156461 MsG0880042593.01.T01:CDS 45.0%
GTAACATGCAGACTGCTTTC+AGG + Chr8:11157215-11157234 None:intergenic 45.0%
GTATGGGACTACATGGTTGA+AGG - Chr8:11156509-11156528 MsG0880042593.01.T01:CDS 45.0%
TAACATCCCAGACTGCTTTC+AGG + Chr8:11156745-11156764 None:intergenic 45.0%
TAAGTGGAACCGAATCACGT+CGG - Chr8:11156459-11156478 MsG0880042593.01.T01:CDS 45.0%
TAGGGTGGCAAATAGACACA+TGG + Chr8:11157598-11157617 None:intergenic 45.0%
TCGAATCACATCGGAATGAG+AGG - Chr8:11156946-11156965 MsG0880042593.01.T01:CDS 45.0%
TGTGACAATTTGGCTGCTTG+AGG + Chr8:11159998-11160017 None:intergenic 45.0%
TGTGTAGGTATGGGACTACA+TGG - Chr8:11156980-11156999 MsG0880042593.01.T01:CDS 45.0%
TTAACGTGGGGTCATCCTTA+CGG + Chr8:11156439-11156458 None:intergenic 45.0%
! TGACATACCGGGAAGTTTTC+CGG - Chr8:11156652-11156671 MsG0880042593.01.T01:CDS 45.0%
! TTTTTGTAACACCCACGACG+TGG - Chr8:11156355-11156374 MsG0880042593.01.T01:CDS 45.0%
!! AAGACTCGTGTTGGTTTGTG+GGG - Chr8:11156707-11156726 MsG0880042593.01.T01:CDS 45.0%
!! ACAAGTGTTCTAGGGACATC+AGG - Chr8:11158826-11158845 MsG0880042593.01.T01:intron 45.0%
!! CAAGTGTTCTAGGGACATCA+GGG - Chr8:11158827-11158846 MsG0880042593.01.T01:intron 45.0%
!! GTGTAGCACTGAATTTTCGC+AGG + Chr8:11159883-11159902 None:intergenic 45.0%
!! TGTTGGTTTGTGGGGTTAGT+CGG - Chr8:11156715-11156734 MsG0880042593.01.T01:CDS 45.0%
!!! TTTTGGGATGGGTGACATAC+CGG - Chr8:11156640-11156659 MsG0880042593.01.T01:CDS 45.0%
AAACTGTGAGTGCACTGAGG+TGG + Chr8:11157738-11157757 None:intergenic 50.0%
AAGGTTCCCGCCAATTGGAA+CGG - Chr8:11156885-11156904 MsG0880042593.01.T01:CDS 50.0%
ACATCGGAATGAGAGGGATC+CGG - Chr8:11156953-11156972 MsG0880042593.01.T01:CDS 50.0%
ACCTTTCGTATCCAACTGGC+GGG + Chr8:11156391-11156410 None:intergenic 50.0%
AGGTCACCCATCCCTTCATA+AGG + Chr8:11157262-11157281 None:intergenic 50.0%
ATAGTGCCCGTTCCAATTGG+CGG + Chr8:11156895-11156914 None:intergenic 50.0%
ATGCTTACCGGGAAACTTCC+CGG + Chr8:11157146-11157165 None:intergenic 50.0%
CAGAAACTGTGAGTGCACTG+AGG + Chr8:11157741-11157760 None:intergenic 50.0%
CCTCTCATTCCGACGTGATT+CGG + Chr8:11156471-11156490 None:intergenic 50.0%
CGAATCACGTCGGAATGAGA+GGG - Chr8:11156469-11156488 MsG0880042593.01.T01:CDS 50.0%
CGCAGGAGCTTCATGTTCTT+GGG + Chr8:11159866-11159885 None:intergenic 50.0%
CGTGTAGGTATGGGACTACA+TGG - Chr8:11156502-11156521 MsG0880042593.01.T01:CDS 50.0%
GATATCGAAAGCCACGTCGT+GGG + Chr8:11156369-11156388 None:intergenic 50.0%
GCTTTCAATATCCCGCCAGT+TGG - Chr8:11156856-11156875 MsG0880042593.01.T01:CDS 50.0%
GGATATTGAAAGCCACGTCG+TGG + Chr8:11156849-11156868 None:intergenic 50.0%
GGCAATCCTGAAAGCAGTCT+GGG - Chr8:11156736-11156755 MsG0880042593.01.T01:CDS 50.0%
GGGAACCTTTCGTATCCAAC+TGG + Chr8:11156395-11156414 None:intergenic 50.0%
GGGACTACATGGTTGAAGGA+AGG - Chr8:11156513-11156532 MsG0880042593.01.T01:CDS 50.0%
GTCCTCACTCACATGCTTAC+CGG + Chr8:11156674-11156693 None:intergenic 50.0%
TACGAAAGGTTCCCGCCAAT+TGG - Chr8:11156880-11156899 MsG0880042593.01.T01:CDS 50.0%
TCCTCACTCACATGCTTACC+GGG + Chr8:11156673-11156692 None:intergenic 50.0%
TCGCAGGAGCTTCATGTTCT+TGG + Chr8:11159867-11159886 None:intergenic 50.0%
TTCCGGTAAGCATGTGAGTG+AGG - Chr8:11156669-11156688 MsG0880042593.01.T01:CDS 50.0%
! GGACATCAGGGCACTTGTTA+AGG - Chr8:11158839-11158858 MsG0880042593.01.T01:intron 50.0%
! TTTGGGATGGGTGACATACC+GGG - Chr8:11156641-11156660 MsG0880042593.01.T01:CDS 50.0%
!!! TTTTGGGATGGGTGACCTAC+CGG - Chr8:11157124-11157143 MsG0880042593.01.T01:intron 50.0%
AAGGTTCCCGCCAGTTGGAA+CGG - Chr8:11156406-11156425 MsG0880042593.01.T01:CDS 55.0%
ACGTCGGAATGAGAGGGATC+CGG - Chr8:11156475-11156494 MsG0880042593.01.T01:CDS 55.0%
AGAGCAGACCTCTCCCAGTA+CGG - Chr8:11156777-11156796 MsG0880042593.01.T01:CDS 55.0%
AGGTTCCCGCCAATTGGAAC+GGG - Chr8:11156886-11156905 MsG0880042593.01.T01:CDS 55.0%
ATAGTGCCCGTTCCAACTGG+CGG + Chr8:11156416-11156435 None:intergenic 55.0%
ATCCGGAGGCTGTGTAGGTA+TGG - Chr8:11156970-11156989 MsG0880042593.01.T01:CDS 55.0%
CCGAATCACGTCGGAATGAG+AGG - Chr8:11156468-11156487 MsG0880042593.01.T01:CDS 55.0%
CGGATAGTGCCCGTTCCAAT+TGG + Chr8:11156898-11156917 None:intergenic 55.0%
CGGCAATCCTGAAAGCAGTC+TGG - Chr8:11156735-11156754 MsG0880042593.01.T01:CDS 55.0%
CTCCCAGTACGGTGTGGTTA+GGG - Chr8:11156788-11156807 MsG0880042593.01.T01:CDS 55.0%
GCTTTCGATATCCCGCCAGT+TGG - Chr8:11156377-11156396 MsG0880042593.01.T01:CDS 55.0%
GGATATCGAAAGCCACGTCG+TGG + Chr8:11156370-11156389 None:intergenic 55.0%
GTGTGGTTAGGGGAAGAACC+AGG - Chr8:11156799-11156818 MsG0880042593.01.T01:CDS 55.0%
TAACCACACCGTACTGGGAG+AGG + Chr8:11156788-11156807 None:intergenic 55.0%
TACGAAAGGTTCCCGCCAGT+TGG - Chr8:11156401-11156420 MsG0880042593.01.T01:CDS 55.0%
TAGTGCCCGTTCCAATTGGC+GGG + Chr8:11156894-11156913 None:intergenic 55.0%
TCCCAGTACGGTGTGGTTAG+GGG - Chr8:11156789-11156808 MsG0880042593.01.T01:CDS 55.0%
TCCCATACCTACACAGCCTC+CGG + Chr8:11156975-11156994 None:intergenic 55.0%
TCCCCTAACCACACCGTACT+GGG + Chr8:11156793-11156812 None:intergenic 55.0%
TCCCGCCAGTTGGATACGAA+AGG - Chr8:11156387-11156406 MsG0880042593.01.T01:CDS 55.0%
TCCCGGTAAGCATGTGAGTG+AGG - Chr8:11157153-11157172 MsG0880042593.01.T01:intron 55.0%
TCCGGAGGCTGTGTAGGTAT+GGG - Chr8:11156971-11156990 MsG0880042593.01.T01:CDS 55.0%
TCTCCCAGTACGGTGTGGTT+AGG - Chr8:11156787-11156806 MsG0880042593.01.T01:CDS 55.0%
TGAAGGGATGGGTGACCTAC+CGG - Chr8:11157264-11157283 MsG0880042593.01.T01:intron 55.0%
TGACCTACCGGGAAGTTTCC+CGG - Chr8:11157136-11157155 MsG0880042593.01.T01:intron 55.0%
TGGAACGGGCACTATCCGTA+AGG - Chr8:11156421-11156440 MsG0880042593.01.T01:CDS 55.0%
TGGTTAGGGGAAGAACCAGG+CGG - Chr8:11156802-11156821 MsG0880042593.01.T01:CDS 55.0%
TGTGTAGGCCTGCAGAGATG+TGG - Chr8:11158195-11158214 MsG0880042593.01.T01:intron 55.0%
TTACCGGGAAACTTCCCGGT+AGG + Chr8:11157142-11157161 None:intergenic 55.0%
TTCCCCTAACCACACCGTAC+TGG + Chr8:11156794-11156813 None:intergenic 55.0%
! TTTGGGATGGGTGACCTACC+GGG - Chr8:11157125-11157144 MsG0880042593.01.T01:intron 55.0%
AAGAACCAGGCGGAAGCTGG+TGG - Chr8:11156812-11156831 MsG0880042593.01.T01:CDS 60.0%
AGAACCAGGCGGAAGCTGGT+GGG - Chr8:11156813-11156832 MsG0880042593.01.T01:CDS 60.0%
AGACCTCTCCCAGTACGGTG+TGG - Chr8:11156782-11156801 MsG0880042593.01.T01:CDS 60.0%
AGGTTCCCGCCAGTTGGAAC+GGG - Chr8:11156407-11156426 MsG0880042593.01.T01:CDS 60.0%
ATCCGGAGGCCGTGTAGGTA+TGG - Chr8:11156492-11156511 MsG0880042593.01.T01:CDS 60.0%
CGGATAGTGCCCGTTCCAAC+TGG + Chr8:11156419-11156438 None:intergenic 60.0%
GAAGGGATGGGTGACCTACC+GGG - Chr8:11157265-11157284 MsG0880042593.01.T01:intron 60.0%
GGCATGTAACACCCACGACG+TGG - Chr8:11156834-11156853 MsG0880042593.01.T01:CDS 60.0%
TAGTGCCCGTTCCAACTGGC+GGG + Chr8:11156415-11156434 None:intergenic 60.0%
TCCCATACCTACACGGCCTC+CGG + Chr8:11156497-11156516 None:intergenic 60.0%
TCCGGAGGCCGTGTAGGTAT+GGG - Chr8:11156493-11156512 MsG0880042593.01.T01:CDS 60.0%
TCGGAATGAGAGGGATCCGG+AGG - Chr8:11156478-11156497 MsG0880042593.01.T01:CDS 60.0%
GAGGGATCCGGAGGCTGTGT+AGG - Chr8:11156965-11156984 MsG0880042593.01.T01:CDS 65.0%
GGGAAGAACCAGGCGGAAGC+TGG - Chr8:11156809-11156828 MsG0880042593.01.T01:CDS 65.0%
CATGCCCACCAGCTTCCGCC+TGG + Chr8:11156820-11156839 None:intergenic 70.0%
GAGGGATCCGGAGGCCGTGT+AGG - Chr8:11156487-11156506 MsG0880042593.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 11156350 11160050 11156350 ID=MsG0880042593.01;Name=MsG0880042593.01
Chr8 mRNA 11156350 11160050 11156350 ID=MsG0880042593.01.T01;Parent=MsG0880042593.01;Name=MsG0880042593.01.T01;_AED=0.27;_eAED=0.28;_QI=0|0|0|0.5|0.66|0.5|4|0|378
Chr8 exon 11159963 11160050 11159963 ID=MsG0880042593.01.T01:exon:4604;Parent=MsG0880042593.01.T01
Chr8 exon 11159484 11159621 11159484 ID=MsG0880042593.01.T01:exon:4603;Parent=MsG0880042593.01.T01
Chr8 exon 11158069 11158198 11158069 ID=MsG0880042593.01.T01:exon:4602;Parent=MsG0880042593.01.T01
Chr8 exon 11156350 11157130 11156350 ID=MsG0880042593.01.T01:exon:4601;Parent=MsG0880042593.01.T01
Chr8 CDS 11159963 11160050 11159963 ID=MsG0880042593.01.T01:cds;Parent=MsG0880042593.01.T01
Chr8 CDS 11159484 11159621 11159484 ID=MsG0880042593.01.T01:cds;Parent=MsG0880042593.01.T01
Chr8 CDS 11158069 11158198 11158069 ID=MsG0880042593.01.T01:cds;Parent=MsG0880042593.01.T01
Chr8 CDS 11156350 11157130 11156350 ID=MsG0880042593.01.T01:cds;Parent=MsG0880042593.01.T01
Gene Sequence

>MsG0880042593.01.T01

ATGTATTTTTGTAACACCCACGACGTGGCTTTCGATATCCCGCCAGTTGGATACGAAAGGTTCCCGCCAGTTGGAACGGGCACTATCCAGCAGACCTCTCCCAGTACGGTGTGGTTAGGGGAAGAACCAGGCGGAAGCTGGTGGGCATGTAACACCCACGACGTGGCTTTCAATATCCCGCCAGTTGGATACGAAAGGTTCCCGCCAATTGGAACGGGCACTATCCGCCTGCAGAGATGTGGAAAGAGTTGCAGATTAAGATGGATAAATTATCTAAGACCTGATTTGAAACGAGGAAGTTTCTCTCATCAAGAAGCTGCACTCATTGTAGAACTACACAACATTCTAGGCAATAGATGGGCTCAGATTGCAAAACACTTACCTGGAAGAACAGATAATGAGGTGAAAAACTTTTGGAATTCAACCATAAAGAAGAAAATCTTTTCTCATGATATTATTTCATCTTTCACCACATTTTCAGATAATCACACCCCCTACCATAATATTGGTTCAATGGAAAACTTCTTCCCTTTAAATGCAAACCCTAATGTAATCCTCAACTTCAATCATTATCACCATCAAGACCATTTAACCTTATCTCCAAATCAGCAAGGTAATTTTCAACAAATTGATACAAAGGTAAACATCAATGACCATTATAATGCCAATTTCCTTCACATTCAAAATCCAATACCACAAAATATAGTGCAACCAATATCTAATCCTTCTACTTATGAAGATACATGGTCATTAGACAGTGTAGCACTTCATCTCAATCCAGTAAATCAAGAAAATCAATTTTCAAAAAGTGACACGACCCCATTTAACAAATTAATGCAACAATATGATCAATATCATGATTTGGTCGAACTTGATGCTACTGTGCCTAAATTAGTCAATCATCAAAGCCTTGAGGATTATGCTTGTAGCATCCTAGATTCATCTAATTCCCAAGAACATGAAGCTCCTGCGAAAATTCAGTGCTACACGTCTGGTATTATTCATCCACAAGATCCAAATGTGGAAGCTAATCAATTGGATTACAATATTGATGCTCTAATGTGTATGTCATCATTGCCATCCTCAAGCAGCCAAATTGTCACAAATCCTATTATTTCTTTAAGATGGGAGTCTTAA

Protein sequence

>MsG0880042593.01.T01

MYFCNTHDVAFDIPPVGYERFPPVGTGTIQQTSPSTVWLGEEPGGSWWACNTHDVAFNIPPVGYERFPPIGTGTIRLQRCGKSCRLRWINYLRPDLKRGSFSHQEAALIVELHNILGNRWAQIAKHLPGRTDNEVKNFWNSTIKKKIFSHDIISSFTTFSDNHTPYHNIGSMENFFPLNANPNVILNFNHYHHQDHLTLSPNQQGNFQQIDTKVNINDHYNANFLHIQNPIPQNIVQPISNPSTYEDTWSLDSVALHLNPVNQENQFSKSDTTPFNKLMQQYDQYHDLVELDATVPKLVNHQSLEDYACSILDSSNSQEHEAPAKIQCYTSGIIHPQDPNVEANQLDYNIDALMCMSSLPSSSSQIVTNPIISLRWES*