AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880042865.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042865.01.T01 MTR_8g023840 75.250 400 37 4 1 338 1 400 0.0 571
MsG0880042865.01.T01 MTR_8g023860 58.231 407 94 6 6 336 13 419 1.04e-147 423
MsG0880042865.01.T01 MTR_8g023930 60.526 266 70 3 5 235 24 289 3.70e-101 306
MsG0880042865.01.T01 MTR_8g023900 56.098 287 85 4 1 246 184 470 3.92e-99 301
MsG0880042865.01.T01 MTR_8g023900 58.378 185 50 3 1 158 1 185 5.16e-67 218
MsG0880042865.01.T01 MTR_8g023880 39.338 272 125 9 2 241 4 267 1.28e-47 162
MsG0880042865.01.T01 MTR_3g093040 49.689 161 54 4 4 140 107 264 1.04e-44 155
MsG0880042865.01.T01 MTR_5g069030 52.830 159 48 4 3 137 23 178 1.09e-43 159
MsG0880042865.01.T01 MTR_3g093050 50.617 162 53 5 3 140 20 178 5.05e-43 157
MsG0880042865.01.T01 MTR_3g093050 50.617 162 53 5 3 140 20 178 1.54e-42 155
MsG0880042865.01.T01 MTR_2g086880 45.087 173 73 6 5 160 19 186 1.72e-37 141
MsG0880042865.01.T01 MTR_2g086880 44.633 177 76 6 5 164 19 190 1.87e-37 140
MsG0880042865.01.T01 MTR_6g477900 51.064 141 65 3 4 143 5 142 1.22e-36 132
MsG0880042865.01.T01 MTR_5g076850 57.391 115 46 2 4 118 5 116 6.25e-35 135
MsG0880042865.01.T01 MTR_3g064580 41.530 183 79 4 4 161 5 184 9.67e-35 134
MsG0880042865.01.T01 MTR_5g014300 44.242 165 65 3 4 142 5 168 1.53e-34 129
MsG0880042865.01.T01 MTR_2g064090 54.472 123 52 3 4 125 5 124 1.83e-34 129
MsG0880042865.01.T01 MTR_1g090723 54.955 111 48 1 8 118 11 119 2.22e-32 127
MsG0880042865.01.T01 MTR_4g098630 40.957 188 83 5 4 166 5 189 2.83e-32 123
MsG0880042865.01.T01 MTR_1g090723 54.955 111 48 1 8 118 11 119 3.64e-32 127
MsG0880042865.01.T01 MTR_1g090723 54.955 111 48 1 8 118 11 119 3.92e-32 127
MsG0880042865.01.T01 MTR_2g080010 43.624 149 78 4 4 151 14 157 9.71e-32 122
MsG0880042865.01.T01 MTR_3g070030 55.263 114 46 4 5 118 19 127 1.38e-31 122
MsG0880042865.01.T01 MTR_8g063550 48.649 111 54 2 8 118 9 116 4.19e-31 120
MsG0880042865.01.T01 MTR_7g085220 35.714 224 120 8 5 207 8 228 9.22e-31 119
MsG0880042865.01.T01 MTR_8g063550 48.649 111 54 2 8 118 9 116 1.19e-30 120
MsG0880042865.01.T01 MTR_3g096140 50.450 111 52 2 8 118 10 117 1.29e-30 117
MsG0880042865.01.T01 MTR_8g063550 48.649 111 54 2 8 118 9 116 3.16e-30 119
MsG0880042865.01.T01 MTR_2g093810 37.766 188 102 6 4 179 13 197 4.19e-30 117
MsG0880042865.01.T01 MTR_8g467490 48.739 119 57 3 8 125 17 132 5.16e-30 118
MsG0880042865.01.T01 MTR_8g099750 50.877 114 51 2 5 118 14 122 5.42e-30 114
MsG0880042865.01.T01 MTR_4g089135 48.361 122 59 3 5 125 15 133 5.81e-30 117
MsG0880042865.01.T01 MTR_3g096140 50.450 111 52 2 8 118 10 117 8.78e-30 117
MsG0880042865.01.T01 MTR_2157s0010 51.304 115 52 3 5 118 8 119 2.18e-29 114
MsG0880042865.01.T01 MTR_7g005280 50.877 114 50 2 5 118 15 122 3.28e-29 113
MsG0880042865.01.T01 MTR_3g435150 52.632 114 49 4 5 118 16 124 9.28e-29 113
MsG0880042865.01.T01 MTR_2g078700 50.877 114 53 2 5 118 23 133 1.06e-28 114
MsG0880042865.01.T01 MTR_7g100990 46.491 114 58 2 5 118 11 121 1.22e-28 113
MsG0880042865.01.T01 MTR_7g011130 53.509 114 48 4 5 118 19 127 1.25e-28 114
MsG0880042865.01.T01 MTR_4g081870 38.983 177 92 4 2 178 6 166 1.36e-28 112
MsG0880042865.01.T01 MTR_4g108760 51.695 118 44 5 5 118 17 125 1.71e-28 113
MsG0880042865.01.T01 MTR_6g011860 50.420 119 54 4 8 125 18 132 1.84e-28 114
MsG0880042865.01.T01 MTR_1g069805 41.781 146 81 3 4 148 9 151 2.98e-28 111
MsG0880042865.01.T01 MTR_3g096920 50.000 122 54 4 5 125 7 122 3.99e-28 111
MsG0880042865.01.T01 MTR_3g088110 50.000 114 51 3 5 118 7 114 4.00e-28 111
MsG0880042865.01.T01 MTR_8g094580 48.361 122 56 4 5 125 7 122 4.22e-28 110
MsG0880042865.01.T01 MTR_1g097300 51.695 118 53 3 1 118 16 129 4.22e-28 115
MsG0880042865.01.T01 MTR_6g084430 48.305 118 56 3 1 118 1 113 4.24e-28 112
MsG0880042865.01.T01 MTR_5g040420 47.899 119 58 3 8 125 17 132 5.38e-28 112
MsG0880042865.01.T01 MTR_3g116070 47.368 114 58 1 5 118 23 134 5.50e-28 112
MsG0880042865.01.T01 MTR_8g093580 46.847 111 56 2 8 118 9 116 5.94e-28 114
MsG0880042865.01.T01 MTR_2g068920 49.565 115 54 3 8 120 24 136 6.80e-28 110
MsG0880042865.01.T01 MTR_7g097090 41.096 146 82 3 4 148 9 151 9.06e-28 110
MsG0880042865.01.T01 MTR_0036s0150 52.252 111 51 1 8 118 8 116 9.56e-28 114
MsG0880042865.01.T01 MTR_7g085260 48.739 119 56 3 2 118 14 129 1.06e-27 112
MsG0880042865.01.T01 MTR_2g068880 48.696 115 55 3 8 120 25 137 1.11e-27 110
MsG0880042865.01.T01 MTR_5g012080 49.138 116 52 4 6 118 8 119 1.39e-27 110
MsG0880042865.01.T01 MTR_6g032770 47.368 114 57 2 5 118 18 128 1.45e-27 111
MsG0880042865.01.T01 MTR_4g134460 49.580 119 55 4 8 125 57 171 1.60e-27 112
MsG0880042865.01.T01 MTR_7g011120 52.632 114 49 4 5 118 8 116 1.64e-27 110
MsG0880042865.01.T01 MTR_4g052620 45.238 126 66 2 1 124 1 125 2.03e-27 108
MsG0880042865.01.T01 MTR_1g008740 46.957 115 59 1 4 118 12 124 2.23e-27 110
MsG0880042865.01.T01 MTR_1g008740 46.957 115 59 1 4 118 26 138 2.37e-27 110
MsG0880042865.01.T01 MTR_6g012670 50.877 114 51 3 5 118 20 128 2.68e-27 109
MsG0880042865.01.T01 MTR_3g096920 50.000 122 54 4 5 125 7 122 2.77e-27 109
MsG0880042865.01.T01 MTR_1g090720 52.174 115 52 2 4 118 41 152 4.22e-27 111
MsG0880042865.01.T01 MTR_3g109340 40.940 149 81 3 4 148 21 166 4.43e-27 109
MsG0880042865.01.T01 MTR_2g064470 48.246 114 52 3 5 118 11 117 5.68e-27 108
MsG0880042865.01.T01 MTR_3g109340 40.909 154 66 4 4 135 21 171 6.87e-27 109
MsG0880042865.01.T01 MTR_2g079990 49.565 115 53 3 4 118 15 124 1.23e-26 108
MsG0880042865.01.T01 MTR_4g036030 48.246 114 55 3 6 118 8 118 1.44e-26 108
MsG0880042865.01.T01 MTR_2g079990 49.565 115 53 3 4 118 15 124 2.08e-26 108
MsG0880042865.01.T01 MTR_5g041940 40.476 168 67 6 5 144 3 165 6.86e-26 104
MsG0880042865.01.T01 MTR_8g076110 44.538 119 62 3 1 118 2 117 1.17e-25 105
MsG0880042865.01.T01 MTR_8g059170 49.573 117 50 4 4 118 13 122 2.30e-25 104
MsG0880042865.01.T01 MTR_5g021710 45.378 119 61 3 1 118 4 119 2.87e-25 104
MsG0880042865.01.T01 MTR_4g035590 49.123 114 54 3 6 118 9 119 3.16e-25 104
MsG0880042865.01.T01 MTR_2g062730 30.508 236 130 7 4 207 9 242 3.60e-25 104
MsG0880042865.01.T01 MTR_1g096430 44.538 119 62 3 1 118 3 118 4.25e-25 103
MsG0880042865.01.T01 MTR_3g098810 44.538 119 59 3 2 118 11 124 5.89e-25 99.8
MsG0880042865.01.T01 MTR_4g101680 45.614 114 58 3 6 118 8 118 5.97e-25 103
MsG0880042865.01.T01 MTR_5g090970 48.214 112 54 3 8 118 21 129 7.49e-25 102
MsG0880042865.01.T01 MTR_5g090970 47.321 112 54 3 8 118 21 128 1.96e-24 101
MsG0880042865.01.T01 MTR_4g075980 38.095 168 73 7 8 147 18 182 2.46e-24 101
MsG0880042865.01.T01 MTR_3g098810 45.690 116 56 3 5 118 14 124 4.60e-24 99.0
MsG0880042865.01.T01 MTR_2g086690 41.259 143 76 4 6 145 5 142 7.00e-24 98.6
MsG0880042865.01.T01 MTR_8g024480 44.737 114 59 3 6 118 16 126 9.42e-23 98.6
MsG0880042865.01.T01 MTR_3g096140 46.939 98 49 2 21 118 2 96 1.56e-22 96.7
MsG0880042865.01.T01 MTR_3g070040 50.877 114 48 5 5 118 8 113 1.82e-22 96.7
MsG0880042865.01.T01 MTR_7g105170 36.975 119 71 3 3 118 2 119 1.13e-17 81.6
MsG0880042865.01.T01 MTR_4g094302 32.479 117 62 4 5 118 11 113 2.36e-13 67.4
MsG0880042865.01.T01 MTR_7g083330 36.036 111 66 3 5 115 18 123 5.89e-13 67.0
MsG0880042865.01.T01 MTR_8g094580 51.562 64 27 2 63 125 8 68 1.77e-12 66.6
MsG0880042865.01.T01 MTR_3g096400 35.897 117 66 3 2 118 4 111 6.07e-12 64.7
MsG0880042865.01.T01 MTR_7g070140 42.029 69 39 1 51 118 6 74 1.16e-11 62.0
MsG0880042865.01.T01 MTR_1g087190 56.522 46 20 0 8 53 8 53 7.19e-11 57.4
MsG0880042865.01.T01 MTR_8g093790 30.769 156 69 6 5 141 10 145 9.06e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880042865.01.T01 AT4G35580 52.500 160 49 4 4 139 8 164 3.00e-46 165
MsG0880042865.01.T01 AT4G35580 52.500 160 49 4 4 139 8 164 3.05e-46 164
MsG0880042865.01.T01 AT4G35580 52.500 160 49 4 4 139 8 164 3.39e-46 164
MsG0880042865.01.T01 AT1G33060 60.870 115 42 2 4 118 23 134 2.00e-42 156
MsG0880042865.01.T01 AT1G33060 60.870 115 42 2 4 118 23 134 2.09e-42 155
MsG0880042865.01.T01 AT3G49530 46.951 164 61 4 3 142 11 172 1.65e-41 149
MsG0880042865.01.T01 AT5G24590 49.045 157 54 4 4 136 12 166 2.65e-41 150
MsG0880042865.01.T01 AT3G49530 46.951 164 61 4 3 142 11 172 5.79e-41 149
MsG0880042865.01.T01 AT4G01550 47.333 150 59 2 7 136 6 155 1.28e-39 145
MsG0880042865.01.T01 AT5G17260 58.537 123 47 3 4 125 5 124 1.30e-37 140
MsG0880042865.01.T01 AT3G17730 45.238 168 65 4 4 147 5 169 7.12e-37 133
MsG0880042865.01.T01 AT3G03200 57.724 123 48 3 4 125 5 124 2.33e-36 137
MsG0880042865.01.T01 AT4G17980 52.137 117 55 1 2 118 3 118 3.18e-36 132
MsG0880042865.01.T01 AT4G17980 52.137 117 55 1 2 118 3 118 1.39e-35 131
MsG0880042865.01.T01 AT1G65910 59.130 115 44 2 4 118 5 116 1.88e-35 136
MsG0880042865.01.T01 AT5G46590 52.632 114 52 2 5 118 6 117 1.63e-32 122
MsG0880042865.01.T01 AT5G46590 52.632 114 52 2 5 118 6 117 2.33e-32 122
MsG0880042865.01.T01 AT5G09330 55.856 111 46 2 8 118 9 116 4.37e-32 125
MsG0880042865.01.T01 AT5G09330 55.856 111 46 2 8 118 9 116 4.37e-32 125
MsG0880042865.01.T01 AT5G09330 55.856 111 46 2 8 118 9 116 4.37e-32 125
MsG0880042865.01.T01 AT5G09330 55.856 111 46 2 8 118 9 116 4.37e-32 125
MsG0880042865.01.T01 AT5G09330 55.856 111 46 2 8 118 9 116 4.37e-32 125
MsG0880042865.01.T01 AT3G44290 44.444 153 63 6 1 136 11 158 9.22e-32 119
MsG0880042865.01.T01 AT3G10480 52.174 115 52 2 4 118 26 137 1.35e-31 123
MsG0880042865.01.T01 AT2G27300 39.130 184 87 7 5 168 15 193 1.39e-31 121
MsG0880042865.01.T01 AT3G10480 52.174 115 52 2 4 118 26 137 1.52e-31 123
MsG0880042865.01.T01 AT5G39610 52.459 122 52 5 5 125 20 136 1.71e-31 120
MsG0880042865.01.T01 AT3G10490 50.000 118 56 2 1 118 23 137 3.39e-31 118
MsG0880042865.01.T01 AT5G39820 49.580 119 56 3 8 125 23 138 4.19e-31 120
MsG0880042865.01.T01 AT4G01520 47.826 115 58 2 6 118 5 119 8.13e-31 119
MsG0880042865.01.T01 AT3G44290 44.444 153 63 6 1 136 11 158 9.77e-31 119
MsG0880042865.01.T01 AT3G10490 50.000 118 56 2 1 118 23 137 1.71e-30 120
MsG0880042865.01.T01 AT1G26870 49.580 119 56 3 8 125 19 134 2.15e-30 120
MsG0880042865.01.T01 AT5G61430 52.632 114 49 4 5 118 16 124 2.98e-30 118
MsG0880042865.01.T01 AT3G04070 50.000 118 53 3 4 118 9 123 3.89e-30 117
MsG0880042865.01.T01 AT3G29035 49.606 127 48 6 5 125 24 140 4.52e-30 117
MsG0880042865.01.T01 AT3G04070 50.000 118 53 3 4 118 9 123 6.33e-30 117
MsG0880042865.01.T01 AT1G54330 46.053 152 58 4 4 134 5 153 6.94e-30 116
MsG0880042865.01.T01 AT3G04060 51.754 114 51 3 5 118 20 129 8.50e-30 116
MsG0880042865.01.T01 AT5G64060 50.420 119 55 3 2 120 4 118 1.14e-29 117
MsG0880042865.01.T01 AT4G01540 48.246 114 57 2 7 118 6 119 1.35e-29 117
MsG0880042865.01.T01 AT4G01540 48.246 114 57 2 7 118 6 119 1.45e-29 117
MsG0880042865.01.T01 AT1G02230 48.246 114 57 2 6 117 4 117 1.73e-29 116
MsG0880042865.01.T01 AT4G01540 48.246 114 57 2 7 118 6 119 2.08e-29 117
MsG0880042865.01.T01 AT1G32510 50.000 124 55 3 1 118 1 123 2.26e-29 114
MsG0880042865.01.T01 AT5G22290 43.333 150 62 6 5 136 22 166 2.30e-29 115
MsG0880042865.01.T01 AT4G01540 48.246 114 57 2 7 118 6 119 2.36e-29 117
MsG0880042865.01.T01 AT1G01720 50.000 114 51 3 5 118 7 114 2.98e-29 114
MsG0880042865.01.T01 AT5G08790 49.180 122 55 4 5 125 7 122 4.46e-29 113
MsG0880042865.01.T01 AT2G24430 40.268 149 82 3 4 148 15 160 7.37e-29 114
MsG0880042865.01.T01 AT2G24430 40.268 149 82 3 4 148 15 160 7.37e-29 114
MsG0880042865.01.T01 AT5G53950 51.754 114 52 2 5 118 17 127 7.57e-29 115
MsG0880042865.01.T01 AT3G15170 50.442 113 53 2 6 118 21 130 8.00e-29 113
MsG0880042865.01.T01 AT3G12910 49.565 115 53 3 8 120 24 135 8.68e-29 113
MsG0880042865.01.T01 AT3G15510 50.909 110 51 2 9 118 21 127 1.03e-28 114
MsG0880042865.01.T01 AT5G07680 50.877 114 51 4 5 118 3 111 1.23e-28 113
MsG0880042865.01.T01 AT2G17040 50.893 112 51 3 8 118 9 117 1.30e-28 112
MsG0880042865.01.T01 AT5G07680 50.877 114 51 4 5 118 17 125 1.42e-28 113
MsG0880042865.01.T01 AT5G04410 52.137 117 53 2 2 118 6 119 1.77e-28 116
MsG0880042865.01.T01 AT3G15500 41.463 164 62 6 4 139 13 170 2.17e-28 112
MsG0880042865.01.T01 AT1G12260 47.500 120 56 4 3 118 2 118 3.03e-28 112
MsG0880042865.01.T01 AT1G71930 47.899 119 58 3 1 118 5 120 3.52e-28 112
MsG0880042865.01.T01 AT1G71930 47.899 119 58 3 1 118 5 120 3.52e-28 112
MsG0880042865.01.T01 AT5G04395 44.531 128 58 3 3 118 26 152 3.61e-28 108
MsG0880042865.01.T01 AT3G10500 44.304 158 61 5 2 135 6 160 3.79e-28 115
MsG0880042865.01.T01 AT3G18400 47.458 118 57 3 1 118 1 113 4.85e-28 111
MsG0880042865.01.T01 AT1G34190 52.174 115 52 2 8 122 19 130 5.54e-28 114
MsG0880042865.01.T01 AT1G69490 48.387 124 58 5 3 125 7 125 5.95e-28 110
MsG0880042865.01.T01 AT1G12260 47.500 120 56 4 3 118 2 118 6.64e-28 112
MsG0880042865.01.T01 AT1G61110 50.000 124 53 5 5 125 16 133 6.85e-28 111
MsG0880042865.01.T01 AT1G76420 46.087 115 59 2 4 118 21 132 9.73e-28 111
MsG0880042865.01.T01 AT1G52890 39.181 171 73 5 4 149 13 177 1.07e-27 110
MsG0880042865.01.T01 AT5G13180 47.368 114 54 2 5 118 14 121 1.80e-27 108
MsG0880042865.01.T01 AT5G18270 50.000 114 53 3 5 118 21 130 2.16e-27 110
MsG0880042865.01.T01 AT5G66300 48.276 116 56 3 4 118 11 123 2.24e-27 109
MsG0880042865.01.T01 AT1G34180 52.252 111 50 2 8 118 19 126 2.45e-27 111
MsG0880042865.01.T01 AT2G02450 48.739 119 56 4 8 125 54 168 2.72e-27 110
MsG0880042865.01.T01 AT1G34180 52.252 111 50 2 8 118 19 126 3.13e-27 112
MsG0880042865.01.T01 AT2G02450 48.739 119 56 4 8 125 54 168 3.16e-27 111
MsG0880042865.01.T01 AT4G27410 40.645 155 63 5 4 134 13 162 3.60e-27 108
MsG0880042865.01.T01 AT1G02250 40.132 152 72 4 6 138 4 155 3.94e-27 110
MsG0880042865.01.T01 AT1G62700 37.000 200 94 7 3 176 2 195 4.05e-27 110
MsG0880042865.01.T01 AT1G62700 37.000 200 94 7 3 176 2 195 4.05e-27 110
MsG0880042865.01.T01 AT5G18270 49.123 114 54 3 5 118 21 130 5.49e-27 108
MsG0880042865.01.T01 AT1G77450 48.246 114 53 3 5 118 10 117 7.64e-27 107
MsG0880042865.01.T01 AT2G43000 48.649 111 52 3 8 118 21 126 1.00e-26 107
MsG0880042865.01.T01 AT5G63790 30.769 260 148 8 4 248 49 291 1.74e-26 107
MsG0880042865.01.T01 AT5G63790 30.769 260 148 8 4 248 59 301 2.28e-26 107
MsG0880042865.01.T01 AT2G33480 50.000 114 49 3 5 118 15 120 2.35e-26 105
MsG0880042865.01.T01 AT2G33480 50.000 114 49 3 5 118 15 120 2.61e-26 105
MsG0880042865.01.T01 AT1G56010 44.737 114 59 2 5 118 19 128 2.69e-25 104
MsG0880042865.01.T01 AT3G10480 41.216 148 51 4 4 118 26 170 3.23e-25 106
MsG0880042865.01.T01 AT4G10350 48.246 114 55 3 6 118 10 120 3.79e-25 104
MsG0880042865.01.T01 AT2G18060 45.690 116 59 3 4 118 8 120 6.46e-25 103
MsG0880042865.01.T01 AT2G18060 45.690 116 59 3 4 118 8 120 6.46e-25 103
MsG0880042865.01.T01 AT1G33280 48.246 114 55 3 6 118 9 119 6.61e-25 102
MsG0880042865.01.T01 AT4G36160 45.690 116 59 3 4 118 13 125 7.29e-25 103
MsG0880042865.01.T01 AT4G36160 45.690 116 59 3 4 118 9 121 7.98e-25 103
MsG0880042865.01.T01 AT4G36160 45.690 116 59 3 4 118 9 121 7.98e-25 103
MsG0880042865.01.T01 AT5G62380 45.217 115 59 3 5 118 7 118 1.51e-24 102
MsG0880042865.01.T01 AT5G62380 45.217 115 59 3 5 118 7 118 1.51e-24 102
MsG0880042865.01.T01 AT4G27410 37.647 170 64 6 4 134 13 179 2.17e-24 101
MsG0880042865.01.T01 AT1G34180 47.154 123 50 3 8 118 19 138 4.01e-24 102
MsG0880042865.01.T01 AT1G34180 47.154 123 50 3 8 118 19 138 4.06e-24 103
MsG0880042865.01.T01 AT1G79580 46.552 116 59 3 4 118 16 129 7.69e-24 100
MsG0880042865.01.T01 AT1G79580 46.552 116 59 3 4 118 16 129 7.69e-24 100
MsG0880042865.01.T01 AT1G79580 46.552 116 59 3 4 118 16 129 7.69e-24 100
MsG0880042865.01.T01 AT1G79580 46.552 116 59 3 4 118 16 129 7.69e-24 100
MsG0880042865.01.T01 AT1G79580 46.552 116 59 3 4 118 16 129 7.69e-24 100
MsG0880042865.01.T01 AT4G28530 38.012 171 59 5 5 135 10 173 2.14e-23 99.4
MsG0880042865.01.T01 AT3G61910 43.478 115 61 3 5 118 11 122 2.93e-23 99.0
MsG0880042865.01.T01 AT2G46770 44.348 115 60 3 5 118 16 127 4.92e-23 98.6
MsG0880042865.01.T01 AT3G12977 42.735 117 58 4 4 118 17 126 1.67e-22 95.9
MsG0880042865.01.T01 AT5G22380 40.157 127 72 3 1 124 1 126 4.98e-22 93.6
MsG0880042865.01.T01 AT1G52880 50.000 114 48 4 9 118 21 129 7.73e-22 94.7
MsG0880042865.01.T01 AT1G32770 45.690 116 55 4 6 118 17 127 1.16e-21 94.7
MsG0880042865.01.T01 AT3G44350 40.000 120 69 2 1 118 1 119 1.33e-21 90.1
MsG0880042865.01.T01 AT3G44350 38.889 126 74 2 1 124 1 125 2.88e-21 91.7
MsG0880042865.01.T01 AT1G02220 44.643 112 59 2 6 116 4 113 1.01e-20 92.4
MsG0880042865.01.T01 AT3G04420 43.750 112 60 3 6 116 4 113 2.46e-20 90.9
MsG0880042865.01.T01 AT3G04420 43.750 112 60 3 6 116 4 113 3.52e-20 89.4
MsG0880042865.01.T01 AT1G01010 37.179 156 70 4 7 136 5 158 6.01e-20 90.5
MsG0880042865.01.T01 AT1G32870 49.550 111 51 3 8 118 13 118 8.77e-20 90.5
MsG0880042865.01.T01 AT1G32870 49.550 111 51 3 8 118 13 118 9.15e-20 90.5
MsG0880042865.01.T01 AT1G32870 49.550 111 51 3 8 118 49 154 9.73e-20 90.5
MsG0880042865.01.T01 AT4G28530 37.086 151 51 4 5 135 10 136 5.05e-19 86.7
MsG0880042865.01.T01 AT3G04430 44.340 106 54 4 11 115 6 107 1.05e-17 80.5
MsG0880042865.01.T01 AT5G64530 35.043 117 59 4 5 118 3 105 2.68e-15 72.8
MsG0880042865.01.T01 AT5G64530 34.746 118 60 4 4 118 2 105 5.34e-15 72.8
MsG0880042865.01.T01 AT5G61430 53.968 63 27 2 56 118 1 61 8.20e-14 71.2
MsG0880042865.01.T01 AT3G12977 51.786 56 25 1 63 118 20 73 3.80e-12 65.5
MsG0880042865.01.T01 AT1G56010 51.786 56 25 1 63 118 8 61 1.17e-11 64.7

Find 54 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTTCGAGATGATTTC+GGG 0.227385 8:+15041193 MsG0880042865.01.T01:CDS
ACAAATACGCAAATAGTAAA+AGG 0.269504 8:+15039430 MsG0880042865.01.T01:CDS
GCATCATTTCGAGATGATTT+CGG 0.275502 8:+15041192 MsG0880042865.01.T01:CDS
AGAGGTACAAACAATGTTAT+TGG 0.278639 8:+15039516 MsG0880042865.01.T01:CDS
TGGTCTTGACCGTAAGATTA+AGG 0.284539 8:+15039491 MsG0880042865.01.T01:CDS
TTTACAGTGTGGCAATGTTC+TGG 0.292487 8:+15041122 MsG0880042865.01.T01:intron
TTTCTTGAACATCCTAGTTC+AGG 0.346685 8:+15041159 MsG0880042865.01.T01:CDS
GTTCGAACCTTGGGACTTAC+CGG 0.351183 8:+15039274 MsG0880042865.01.T01:CDS
GAGGTACAAACAATGTTATT+GGG 0.353644 8:+15039517 MsG0880042865.01.T01:CDS
AAAACACTTGTGTACTATAA+TGG 0.357000 8:+15039546 MsG0880042865.01.T01:CDS
GACATGAAGGTGGCTGGTCT+TGG 0.374690 8:-15041330 None:intergenic
CATATCGATGTGTCCACTTT+CGG 0.387067 8:-15040792 None:intergenic
TGGCTGGTCTTGGATGATAC+TGG 0.427061 8:-15041320 None:intergenic
GAAGGACAGAGTGTGGATAC+TGG 0.428296 8:+15039460 MsG0880042865.01.T01:CDS
TACCTCTAACCTTAATCTTA+CGG 0.431946 8:-15039500 None:intergenic
TGTTTGCAAGTTCGAACCTT+GGG 0.438935 8:+15039265 MsG0880042865.01.T01:CDS
GACCGTAAGATTAAGGTTAG+AGG 0.442904 8:+15039498 MsG0880042865.01.T01:CDS
CAAGCTCTTCATCTGTTGGT+TGG 0.449162 8:-15039172 None:intergenic
AATGTTTCAGGAACCTCATC+AGG 0.458637 8:+15040679 MsG0880042865.01.T01:intron
TTGCTTCTTCTTAGAGTGGA+AGG 0.462185 8:-15041294 None:intergenic
TCGGAACTCATGTGTTTACT+TGG 0.464802 8:-15040521 None:intergenic
TTTACAAGCTCTTCATCTGT+TGG 0.472698 8:-15039176 None:intergenic
TCCTCGTCAATAGTTTCAAA+CGG 0.474217 8:-15040821 None:intergenic
GAAAATCAAGAAGCAGTTGA+AGG 0.489171 8:+15040548 MsG0880042865.01.T01:CDS
GGTTGGAATCTGAATCCAAC+AGG 0.493475 8:-15039155 None:intergenic
TTCAATCTCTGAAAATGAGA+TGG 0.499943 8:+15040736 MsG0880042865.01.T01:CDS
ATGACAAACTCATTTCCTGT+TGG 0.502565 8:+15039140 MsG0880042865.01.T01:CDS
GCATAGTATTCTCCTGAACT+AGG 0.503449 8:-15041171 None:intergenic
GAAGACTGGTATGTTGAGAA+AGG 0.511939 8:-15040716 None:intergenic
AGCTATAAAATTGTTGACAA+TGG 0.512549 8:-15039234 None:intergenic
GATAGAATGATATGTGATGA+AGG 0.532647 8:+15040494 MsG0880042865.01.T01:CDS
GAAGTATCTTTATCGAACTC+AGG 0.533769 8:+15040758 MsG0880042865.01.T01:CDS
TAGAATGATATGTGATGAAG+GGG 0.540119 8:+15040496 MsG0880042865.01.T01:CDS
TTCGAACCTTGGGACTTACC+GGG 0.549304 8:+15039275 MsG0880042865.01.T01:CDS
CTCGACTGCAAATAAACCTC+GGG 0.549433 8:+15041239 MsG0880042865.01.T01:CDS
TAAAATCCAATGATCCAGAA+TGG 0.550077 8:+15039385 MsG0880042865.01.T01:CDS
ATAGAATGATATGTGATGAA+GGG 0.555622 8:+15040495 MsG0880042865.01.T01:CDS
CTCAACGACTCGGACTGGAC+AGG 0.561123 8:-15040924 None:intergenic
ATCAATTCGATGTTAAATGA+CGG 0.567730 8:+15040854 MsG0880042865.01.T01:CDS
ATGTTTGCAAGTTCGAACCT+TGG 0.568862 8:+15039264 MsG0880042865.01.T01:CDS
ATAGTAAAAGGTTTAACAGA+AGG 0.579914 8:+15039442 MsG0880042865.01.T01:CDS
TGTGGATACTGGAAAGCCAC+TGG 0.585586 8:+15039471 MsG0880042865.01.T01:CDS
ATTTGCAGTCGAGTCACAAG+AGG 0.587545 8:-15041229 None:intergenic
CAATGTTCTGGATACTTCAA+CGG 0.597908 8:+15041134 MsG0880042865.01.T01:CDS
TTTAACAGAAGGACAGAGTG+TGG 0.612656 8:+15039453 MsG0880042865.01.T01:CDS
ACTCGACTGCAAATAAACCT+CGG 0.624687 8:+15041238 MsG0880042865.01.T01:CDS
AATCTTACGGTCAAGACCAG+TGG 0.626820 8:-15039487 None:intergenic
TCCGTTTGAAACTATTGACG+AGG 0.648885 8:+15040820 MsG0880042865.01.T01:CDS
ATCATTTCGAGATGATTTCG+GGG 0.650121 8:+15041194 MsG0880042865.01.T01:CDS
TTTGCGTATTTGTAATCGCG+AGG 0.654879 8:-15039420 None:intergenic
GAATGATATGTGATGAAGGG+GGG 0.665909 8:+15040498 MsG0880042865.01.T01:CDS
TCATTTCGAGATGATTTCGG+GGG 0.671935 8:+15041195 MsG0880042865.01.T01:CDS
ACACAATTGATCATCTCCCG+AGG 0.677154 8:-15041255 None:intergenic
AGAATGATATGTGATGAAGG+GGG 0.758539 8:+15040497 MsG0880042865.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGTATTAAAGAAAATATTTA+CGG - Chr8:15041000-15041019 None:intergenic 10.0%
!!! AGTGAAATTTTAATTTTTTT+TGG - Chr8:15039952-15039971 None:intergenic 10.0%
!!! TTTTGCTAAATAATTTTTTT+TGG + Chr8:15040006-15040025 MsG0880042865.01.T01:intron 10.0%
!! AGAATGTTAATAATTCATTA+TGG - Chr8:15039889-15039908 None:intergenic 15.0%
!! GAATGTTAATAATTCATTAT+GGG - Chr8:15039888-15039907 None:intergenic 15.0%
!! GTATTAAAGAAAATATTTAC+GGG - Chr8:15040999-15041018 None:intergenic 15.0%
!!! TTTTATGAGAAAATAATGAT+GGG - Chr8:15039318-15039337 None:intergenic 15.0%
!!! TTTTTATGAGAAAATAATGA+TGG - Chr8:15039319-15039338 None:intergenic 15.0%
!! TATCTCAAAAACAAGTTATT+TGG + Chr8:15039203-15039222 MsG0880042865.01.T01:CDS 20.0%
!! TTTATGAGAAAATAATGATG+GGG - Chr8:15039317-15039336 None:intergenic 20.0%
!! TTTGCAAAAAAAAAACATAC+TGG + Chr8:15039644-15039663 MsG0880042865.01.T01:intron 20.0%
!!! TTTTTTTGCAAATTTTTTGC+CGG - Chr8:15039636-15039655 None:intergenic 20.0%
! AAAACACTTGTGTACTATAA+TGG + Chr8:15039546-15039565 MsG0880042865.01.T01:CDS 25.0%
! ACAAATACGCAAATAGTAAA+AGG + Chr8:15039430-15039449 MsG0880042865.01.T01:CDS 25.0%
! AGACTTTGTTCTCAAAATTT+CGG - Chr8:15040613-15040632 None:intergenic 25.0%
! AGCTATAAAATTGTTGACAA+TGG - Chr8:15039237-15039256 None:intergenic 25.0%
! ATAGAATGATATGTGATGAA+GGG + Chr8:15040495-15040514 MsG0880042865.01.T01:CDS 25.0%
! ATAGTAAAAGGTTTAACAGA+AGG + Chr8:15039442-15039461 MsG0880042865.01.T01:CDS 25.0%
! ATCAATTCGATGTTAAATGA+CGG + Chr8:15040854-15040873 MsG0880042865.01.T01:CDS 25.0%
! GTCTTCATAAAATAAAACCT+GGG - Chr8:15039674-15039693 None:intergenic 25.0%
!! AAATAATGATGGGGTTTATT+TGG - Chr8:15039308-15039327 None:intergenic 25.0%
!! TAACATTCTGAGCAATATTT+TGG + Chr8:15039900-15039919 MsG0880042865.01.T01:intron 25.0%
!!! ATAACTTGTTTTTGAGATAG+TGG - Chr8:15039202-15039221 None:intergenic 25.0%
!!! GAGTATGATATGAGTTTTTT+CGG + Chr8:15040378-15040397 MsG0880042865.01.T01:intron 25.0%
!!! TCTTCTAAAATTTTACAGTG+TGG + Chr8:15041111-15041130 MsG0880042865.01.T01:intron 25.0%
AACTACGAATTATGTGACTA+TGG + Chr8:15040266-15040285 MsG0880042865.01.T01:intron 30.0%
AAGCATGTTTCATGTAAGAA+AGG - Chr8:15040646-15040665 None:intergenic 30.0%
ATAGTCACATAATTCGTTGA+CGG + Chr8:15039582-15039601 MsG0880042865.01.T01:intron 30.0%
CATGAAACATGCTTAGAATA+TGG + Chr8:15040652-15040671 MsG0880042865.01.T01:intron 30.0%
CATTCTAGTAGCATTTCAAA+AGG - Chr8:15041071-15041090 None:intergenic 30.0%
CGTCTTCATAAAATAAAACC+TGG - Chr8:15039675-15039694 None:intergenic 30.0%
GAGGTACAAACAATGTTATT+GGG + Chr8:15039517-15039536 MsG0880042865.01.T01:CDS 30.0%
GATAGAATGATATGTGATGA+AGG + Chr8:15040494-15040513 MsG0880042865.01.T01:CDS 30.0%
TAAAATCCAATGATCCAGAA+TGG + Chr8:15039385-15039404 MsG0880042865.01.T01:CDS 30.0%
TACCTCTAACCTTAATCTTA+CGG - Chr8:15039503-15039522 None:intergenic 30.0%
TAGAATGATATGTGATGAAG+GGG + Chr8:15040496-15040515 MsG0880042865.01.T01:CDS 30.0%
TAGATCTAAATCTCAAGTGA+TGG + Chr8:15039706-15039725 MsG0880042865.01.T01:intron 30.0%
TTGAAGGAATTCTTGATGTA+AGG + Chr8:15040564-15040583 MsG0880042865.01.T01:intron 30.0%
TTGTTGTAACAAAACAAACC+TGG - Chr8:15040344-15040363 None:intergenic 30.0%
! AAAAGAAGACACACTTTTGT+CGG + Chr8:15040896-15040915 MsG0880042865.01.T01:CDS 30.0%
! AAAAGTCCTCTACGAAATTT+TGG - Chr8:15040423-15040442 None:intergenic 30.0%
! AGAGGTACAAACAATGTTAT+TGG + Chr8:15039516-15039535 MsG0880042865.01.T01:CDS 30.0%
! GTTAGAGTTTAGAGGTTTTT+GGG + Chr8:15039728-15039747 MsG0880042865.01.T01:intron 30.0%
! TTCAATCTCTGAAAATGAGA+TGG + Chr8:15040736-15040755 MsG0880042865.01.T01:CDS 30.0%
!! ATGGGTTGAAGAAATTTTAC+AGG + Chr8:15039763-15039782 MsG0880042865.01.T01:intron 30.0%
!! GTTTTATTCATACTGTGATG+TGG + Chr8:15041032-15041051 MsG0880042865.01.T01:intron 30.0%
!!! CTTTTGAAATGCTACTAGAA+TGG + Chr8:15041069-15041088 MsG0880042865.01.T01:intron 30.0%
!!! GGTTTATTTGGTTTTTTACC+CGG - Chr8:15039296-15039315 None:intergenic 30.0%
!!! TGAGAAAGGAAAGTACTTTT+CGG - Chr8:15040705-15040724 None:intergenic 30.0%
!!! TGCTGGACATTTTTTACATT+GGG + Chr8:15039847-15039866 MsG0880042865.01.T01:intron 30.0%
!!! TTGCTGGACATTTTTTACAT+TGG + Chr8:15039846-15039865 MsG0880042865.01.T01:intron 30.0%
AAAAACATACTGGTAAACCC+AGG + Chr8:15039654-15039673 MsG0880042865.01.T01:intron 35.0%
AAGTGATGGTTAGAGTTTAG+AGG + Chr8:15039720-15039739 MsG0880042865.01.T01:intron 35.0%
ACAAACCTGGTTATCATCAA+AGG - Chr8:15040331-15040350 None:intergenic 35.0%
ACATAATTCGTAGTTCGCTT+CGG - Chr8:15040261-15040280 None:intergenic 35.0%
AGAATGATATGTGATGAAGG+GGG + Chr8:15040497-15040516 MsG0880042865.01.T01:CDS 35.0%
AGGAGGAAGATGTTGATATT+AGG + Chr8:15039815-15039834 MsG0880042865.01.T01:intron 35.0%
ATCATTTCGAGATGATTTCG+GGG + Chr8:15041194-15041213 MsG0880042865.01.T01:CDS 35.0%
ATGACAAACTCATTTCCTGT+TGG + Chr8:15039140-15039159 MsG0880042865.01.T01:CDS 35.0%
CATCATTTCGAGATGATTTC+GGG + Chr8:15041193-15041212 MsG0880042865.01.T01:CDS 35.0%
GAAAAACCATTCTGGATCAT+TGG - Chr8:15039394-15039413 None:intergenic 35.0%
GAAAATCAAGAAGCAGTTGA+AGG + Chr8:15040548-15040567 MsG0880042865.01.T01:CDS 35.0%
GAATATGGAACCAATGTTTC+AGG + Chr8:15040667-15040686 MsG0880042865.01.T01:intron 35.0%
GACTATGGTTAAAAGCAACT+GGG + Chr8:15040281-15040300 MsG0880042865.01.T01:intron 35.0%
GCATCATTTCGAGATGATTT+CGG + Chr8:15041192-15041211 MsG0880042865.01.T01:CDS 35.0%
GGACAAAAGAAAAACCATTC+TGG - Chr8:15039402-15039421 None:intergenic 35.0%
GGAGGAAGATGTTGATATTA+GGG + Chr8:15039816-15039835 MsG0880042865.01.T01:intron 35.0%
TATCCTCCAAAATTTCGTAG+AGG + Chr8:15040414-15040433 MsG0880042865.01.T01:intron 35.0%
TCCTCGTCAATAGTTTCAAA+CGG - Chr8:15040824-15040843 None:intergenic 35.0%
TCGTTGAGAATGATCTACTA+TGG + Chr8:15040939-15040958 MsG0880042865.01.T01:intron 35.0%
TGACTATGGTTAAAAGCAAC+TGG + Chr8:15040280-15040299 MsG0880042865.01.T01:intron 35.0%
TGTAAAAAATGTCCAGCAAC+TGG - Chr8:15039845-15039864 None:intergenic 35.0%
TTTACAAGCTCTTCATCTGT+TGG - Chr8:15039179-15039198 None:intergenic 35.0%
TTTCTTGAACATCCTAGTTC+AGG + Chr8:15041159-15041178 MsG0880042865.01.T01:CDS 35.0%
! CAATGTTCTGGATACTTCAA+CGG + Chr8:15041134-15041153 MsG0880042865.01.T01:CDS 35.0%
! CATTTTCAGAGATTGAAGAC+TGG - Chr8:15040733-15040752 None:intergenic 35.0%
! GAAGTATCTTTATCGAACTC+AGG + Chr8:15040758-15040777 MsG0880042865.01.T01:CDS 35.0%
! GGATTTTATGATTCCGAAAG+TGG + Chr8:15040779-15040798 MsG0880042865.01.T01:CDS 35.0%
! GGTTAGAGTTTAGAGGTTTT+TGG + Chr8:15039727-15039746 MsG0880042865.01.T01:intron 35.0%
! GGTTGAAGAAATTTTACAGG+AGG + Chr8:15039766-15039785 MsG0880042865.01.T01:intron 35.0%
! GTTTTTGCTTCTTCTTAGAG+TGG - Chr8:15041301-15041320 None:intergenic 35.0%
! TGAAGAAATTTTACAGGAGG+AGG + Chr8:15039769-15039788 MsG0880042865.01.T01:intron 35.0%
!! TTTGGGAAAGTGCTGAAAAT+GGG + Chr8:15039745-15039764 MsG0880042865.01.T01:intron 35.0%
!!! ACATTTTTTACATTGGGCCT+GGG + Chr8:15039853-15039872 MsG0880042865.01.T01:intron 35.0%
!!! TTCCTCTTCAGCTTTTTTCT+CGG - Chr8:15040471-15040490 None:intergenic 35.0%
!!! TTTTGGGAAAGTGCTGAAAA+TGG + Chr8:15039744-15039763 MsG0880042865.01.T01:intron 35.0%
AACCTGGTTATCATCAAAGG+TGG - Chr8:15040328-15040347 None:intergenic 40.0%
AATGTTTCAGGAACCTCATC+AGG + Chr8:15040679-15040698 MsG0880042865.01.T01:intron 40.0%
ACTCGACTGCAAATAAACCT+CGG + Chr8:15041238-15041257 MsG0880042865.01.T01:CDS 40.0%
AGTACTAGTACTACGAACCA+AGG + Chr8:15040157-15040176 MsG0880042865.01.T01:intron 40.0%
ATATTAGGGTTTCCAGTTGC+TGG + Chr8:15039830-15039849 MsG0880042865.01.T01:intron 40.0%
ATGTTTGCAAGTTCGAACCT+TGG + Chr8:15039264-15039283 MsG0880042865.01.T01:CDS 40.0%
CATATCGATGTGTCCACTTT+CGG - Chr8:15040795-15040814 None:intergenic 40.0%
GAAGACTGGTATGTTGAGAA+AGG - Chr8:15040719-15040738 None:intergenic 40.0%
GAATGATATGTGATGAAGGG+GGG + Chr8:15040498-15040517 MsG0880042865.01.T01:CDS 40.0%
GACCGTAAGATTAAGGTTAG+AGG + Chr8:15039498-15039517 MsG0880042865.01.T01:CDS 40.0%
GCATAGTATTCTCCTGAACT+AGG - Chr8:15041174-15041193 None:intergenic 40.0%
GTAGATCATTCTCAACGACT+CGG - Chr8:15040937-15040956 None:intergenic 40.0%
TACGCGACATGAGAAGAATT+CGG - Chr8:15040212-15040231 None:intergenic 40.0%
TCATTTCGAGATGATTTCGG+GGG + Chr8:15041195-15041214 MsG0880042865.01.T01:CDS 40.0%
TCGGAACTCATGTGTTTACT+TGG - Chr8:15040524-15040543 None:intergenic 40.0%
TGATGAGGTTCCTGAAACAT+TGG - Chr8:15040680-15040699 None:intergenic 40.0%
TGTTTGCAAGTTCGAACCTT+GGG + Chr8:15039265-15039284 MsG0880042865.01.T01:CDS 40.0%
TTGCTTCTTCTTAGAGTGGA+AGG - Chr8:15041297-15041316 None:intergenic 40.0%
TTTAACAGAAGGACAGAGTG+TGG + Chr8:15039453-15039472 MsG0880042865.01.T01:CDS 40.0%
TTTACAGTGTGGCAATGTTC+TGG + Chr8:15041122-15041141 MsG0880042865.01.T01:intron 40.0%
TTTGCGTATTTGTAATCGCG+AGG - Chr8:15039423-15039442 None:intergenic 40.0%
! AGAAATTTTACAGGAGGAGG+AGG + Chr8:15039772-15039791 MsG0880042865.01.T01:intron 40.0%
! AGCAGCTCTTTTTGACATGA+AGG - Chr8:15041346-15041365 None:intergenic 40.0%
! AGCTCTTTTTGACATGAAGG+TGG - Chr8:15041343-15041362 None:intergenic 40.0%
! AGTCCTCTACGAAATTTTGG+AGG - Chr8:15040420-15040439 None:intergenic 40.0%
! TACCACCTTTGATGATAACC+AGG + Chr8:15040323-15040342 MsG0880042865.01.T01:intron 40.0%
! TCCGTTTGAAACTATTGACG+AGG + Chr8:15040820-15040839 MsG0880042865.01.T01:CDS 40.0%
! TGCTTCTTGATTTTCGCGAT+CGG - Chr8:15040543-15040562 None:intergenic 40.0%
! TGGTCTTGACCGTAAGATTA+AGG + Chr8:15039491-15039510 MsG0880042865.01.T01:CDS 40.0%
!!! AAATTTTTTGCCGGTTCCTG+TGG - Chr8:15039627-15039646 None:intergenic 40.0%
!!! GACATTTTTTACATTGGGCC+TGG + Chr8:15039852-15039871 MsG0880042865.01.T01:intron 40.0%
AATCTTACGGTCAAGACCAG+TGG - Chr8:15039490-15039509 None:intergenic 45.0%
ACACAATTGATCATCTCCCG+AGG - Chr8:15041258-15041277 None:intergenic 45.0%
AGAAGAATTCGGTACGTCTG+AGG - Chr8:15040201-15040220 None:intergenic 45.0%
AGATGATTTCGGGGGATTTG+AGG + Chr8:15041203-15041222 MsG0880042865.01.T01:CDS 45.0%
AGCCGAGAAAAAAGCTGAAG+AGG + Chr8:15040466-15040485 MsG0880042865.01.T01:CDS 45.0%
ATTATGGGCCAAACAAACCC+AGG - Chr8:15039873-15039892 None:intergenic 45.0%
ATTTGCAGTCGAGTCACAAG+AGG - Chr8:15041232-15041251 None:intergenic 45.0%
CAAGCTCTTCATCTGTTGGT+TGG - Chr8:15039175-15039194 None:intergenic 45.0%
CTCGACTGCAAATAAACCTC+GGG + Chr8:15041239-15041258 MsG0880042865.01.T01:CDS 45.0%
CTGCTCAATTGAGTGAAAGG+AGG + Chr8:15039798-15039817 MsG0880042865.01.T01:intron 45.0%
GAAGAATTCGGTACGTCTGA+GGG - Chr8:15040200-15040219 None:intergenic 45.0%
GGTTGGAATCTGAATCCAAC+AGG - Chr8:15039158-15039177 None:intergenic 45.0%
! AAGTACTTTTCGGCCTGATG+AGG - Chr8:15040695-15040714 None:intergenic 45.0%
! AATTTTACAGGAGGAGGAGG+CGG + Chr8:15039775-15039794 MsG0880042865.01.T01:intron 45.0%
! CTTTTTGACATGAAGGTGGC+TGG - Chr8:15041339-15041358 None:intergenic 45.0%
! TTTTTACCCGGTAAGTCCCA+AGG - Chr8:15039284-15039303 None:intergenic 45.0%
!! TTATTAAAAAAATTATTGAT+AGG + Chr8:15040115-15040134 MsG0880042865.01.T01:intron 5.0%
AACAAGCGTACCACAGGAAC+CGG + Chr8:15039614-15039633 MsG0880042865.01.T01:intron 50.0%
CGGCTGCTCAATTGAGTGAA+AGG + Chr8:15039795-15039814 MsG0880042865.01.T01:intron 50.0%
GAAGGACAGAGTGTGGATAC+TGG + Chr8:15039460-15039479 MsG0880042865.01.T01:CDS 50.0%
GTTCGAACCTTGGGACTTAC+CGG + Chr8:15039274-15039293 MsG0880042865.01.T01:CDS 50.0%
TATAGAGCTTCGGTACGCCT+TGG - Chr8:15040177-15040196 None:intergenic 50.0%
TGTGGATACTGGAAAGCCAC+TGG + Chr8:15039471-15039490 MsG0880042865.01.T01:CDS 50.0%
TTCGAACCTTGGGACTTACC+GGG + Chr8:15039275-15039294 MsG0880042865.01.T01:CDS 50.0%
! ACATTGGGCCTGGGTTTGTT+TGG + Chr8:15039862-15039881 MsG0880042865.01.T01:intron 50.0%
! CGTCTGAGGGTATAGAGCTT+CGG - Chr8:15040187-15040206 None:intergenic 50.0%
! TCATTCTCAACGACTCGGAC+TGG - Chr8:15040932-15040951 None:intergenic 50.0%
!! TGGCTGGTCTTGGATGATAC+TGG - Chr8:15041323-15041342 None:intergenic 50.0%
CGCAGAAACAAGCGTACCAC+AGG + Chr8:15039608-15039627 MsG0880042865.01.T01:intron 55.0%
GTTCGCTTCGGTACGTGGTA+CGG - Chr8:15040249-15040268 None:intergenic 55.0%
TCGTAGTTCGCTTCGGTACG+TGG - Chr8:15040254-15040273 None:intergenic 55.0%
TTCGCTTCGGTACGTGGTAC+GGG - Chr8:15040248-15040267 None:intergenic 55.0%
TTCGGTACGTGGTACGGGTT+CGG - Chr8:15040243-15040262 None:intergenic 55.0%
!! GACATGAAGGTGGCTGGTCT+TGG - Chr8:15041333-15041352 None:intergenic 55.0%
TCGGTACGTGGTACGGGTTC+GGG - Chr8:15040242-15040261 None:intergenic 60.0%
! CTCAACGACTCGGACTGGAC+AGG - Chr8:15040927-15040946 None:intergenic 60.0%
GTGGTACGGGTTCGGGTACG+CGG - Chr8:15040235-15040254 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 15039140 15041386 15039140 ID=MsG0880042865.01;Name=MsG0880042865.01
Chr8 mRNA 15039140 15041386 15039140 ID=MsG0880042865.01.T01;Parent=MsG0880042865.01;Name=MsG0880042865.01.T01;_AED=0.38;_eAED=0.38;_QI=0|0|0|1|1|1|5|0|338
Chr8 exon 15039140 15039296 15039140 ID=MsG0880042865.01.T01:exon:3980;Parent=MsG0880042865.01.T01
Chr8 exon 15039373 15039584 15039373 ID=MsG0880042865.01.T01:exon:3981;Parent=MsG0880042865.01.T01
Chr8 exon 15040434 15040580 15040434 ID=MsG0880042865.01.T01:exon:3982;Parent=MsG0880042865.01.T01
Chr8 exon 15040689 15040931 15040689 ID=MsG0880042865.01.T01:exon:3983;Parent=MsG0880042865.01.T01
Chr8 exon 15041129 15041386 15041129 ID=MsG0880042865.01.T01:exon:3984;Parent=MsG0880042865.01.T01
Chr8 CDS 15039140 15039296 15039140 ID=MsG0880042865.01.T01:cds;Parent=MsG0880042865.01.T01
Chr8 CDS 15039373 15039584 15039373 ID=MsG0880042865.01.T01:cds;Parent=MsG0880042865.01.T01
Chr8 CDS 15040434 15040580 15040434 ID=MsG0880042865.01.T01:cds;Parent=MsG0880042865.01.T01
Chr8 CDS 15040689 15040931 15040689 ID=MsG0880042865.01.T01:cds;Parent=MsG0880042865.01.T01
Chr8 CDS 15041129 15041386 15041129 ID=MsG0880042865.01.T01:cds;Parent=MsG0880042865.01.T01
Gene Sequence

>MsG0880042865.01.T01

ATGACAAACTCATTTCCTGTTGGATTCAGATTCCAACCAACAGATGAAGAGCTTGTAAACCACTATCTCAAAAACAAGTTATTTGGTAATGATTCCATTGTCAACAATTTTATAGCTGAAGTCGATGTTTGCAAGTTCGAACCTTGGGACTTACCGGCTTGTTCAATCATAAAATCCAATGATCCAGAATGGTTTTTCTTTTGTCCTCGCGATTACAAATACGCAAATAGTAAAAGGTTTAACAGAAGGACAGAGTGTGGATACTGGAAAGCCACTGGTCTTGACCGTAAGATTAAGGTTAGAGGTACAAACAATGTTATTGGGACAAAGAAAACACTTGTGTACTATAATGGTTGTGTTAAAAGCATAAGGACTTTTGTTTTGTGTCGCTTGATGAAGAAAGCCGAGAAAAAAGCTGAAGAGGAAACTGATAGAATGATATGTGATGAAGGGGGGCCAAGTAAACACATGAGTTCCGATCGCGAAAATCAAGAAGCAGTTGAAGGAATTCTTGATGAACCTCATCAGGCCGAAAAGTACTTTCCTTTCTCAACATACCAGTCTTCAATCTCTGAAAATGAGATGGAAGTATCTTTATCGAACTCAGGATTTTATGATTCCGAAAGTGGACACATCGATATGCAGAGTCCGTTTGAAACTATTGACGAGGAAAATCAGTTCATCAATTCGATGTTAAATGACGGATATCTTGTTAATAGTGAAAAAAGAAGACACACTTTTGTCGGCTTGTCCTGTCCATGTGGCAATGTTCTGGATACTTCAACGGCATTTCTTGAACATCCTAGTTCAGGAGAATACTATGCATCATTTCGAGATGATTTCGGGGGATTTGAGGCATCCTCTTGTGACTCGACTGCAAATAAACCTCGGGAGATGATCAATTGTGTTGAAATTTCTAGTGCACCTTCCACTCTAAGAAGAAGCAAAAACCAGTATCATCCAAGACCAGCCACCTTCATGTCAAAAAGAGCTGCTTCAAGACGATCTCAAACATAG
Protein sequence

>MsG0880042865.01.T01

MTNSFPVGFRFQPTDEELVNHYLKNKLFGNDSIVNNFIAEVDVCKFEPWDLPACSIIKSNDPEWFFFCPRDYKYANSKRFNRRTECGYWKATGLDRKIKVRGTNNVIGTKKTLVYYNGCVKSIRTFVLCRLMKKAEKKAEEETDRMICDEGGPSKHMSSDRENQEAVEGILDEPHQAEKYFPFSTYQSSISENEMEVSLSNSGFYDSESGHIDMQSPFETIDEENQFINSMLNDGYLVNSEKRRHTFVGLSCPCGNVLDTSTAFLEHPSSGEYYASFRDDFGGFEASSCDSTANKPREMINCVEISSAPSTLRRSKNQYHPRPATFMSKRAASRRSQT*