AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880043000.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043000.01.T01 MTR_3g101810 93.407 273 15 3 289 560 1 271 2.60e-169 481
MsG0880043000.01.T01 MTR_3g101810 92.996 257 16 2 1 257 1 255 9.73e-159 454
MsG0880043000.01.T01 MTR_5g017210 63.354 161 54 3 379 538 56 212 3.37e-46 162
MsG0880043000.01.T01 MTR_5g017210 61.491 161 57 3 91 250 56 212 1.38e-44 158
MsG0880043000.01.T01 MTR_8g093500 78.022 91 20 0 434 524 87 177 3.92e-44 158
MsG0880043000.01.T01 MTR_8g093500 77.778 90 20 0 146 235 87 176 1.31e-43 157
MsG0880043000.01.T01 MTR_2g100490 64.516 93 32 1 433 524 261 353 5.09e-26 110
MsG0880043000.01.T01 MTR_2g100490 62.366 93 34 1 145 236 261 353 3.93e-25 107
MsG0880043000.01.T01 MTR_8g015450 56.731 104 41 1 433 532 296 399 1.01e-25 110
MsG0880043000.01.T01 MTR_8g015450 55.340 103 42 1 145 243 296 398 1.17e-24 107
MsG0880043000.01.T01 MTR_7g069590 67.797 59 18 1 179 237 32 89 5.54e-21 90.1
MsG0880043000.01.T01 MTR_7g069590 70.370 54 16 0 467 520 32 85 1.39e-20 89.0
MsG0880043000.01.T01 MTR_5g079500 64.286 56 20 0 468 523 225 280 1.59e-17 84.0
MsG0880043000.01.T01 MTR_5g079500 62.500 56 21 0 180 235 225 280 2.30e-17 83.6
MsG0880043000.01.T01 MTR_1g018090 62.963 54 20 0 182 235 283 336 1.14e-16 82.4
MsG0880043000.01.T01 MTR_1g018090 62.963 54 20 0 470 523 283 336 1.44e-16 82.0
MsG0880043000.01.T01 MTR_1g106460 52.239 67 32 0 457 523 234 300 1.44e-16 81.6
MsG0880043000.01.T01 MTR_1g106460 50.746 67 33 0 169 235 234 300 2.18e-16 80.9
MsG0880043000.01.T01 MTR_1g106470 45.679 81 44 0 470 550 205 285 2.43e-16 80.1
MsG0880043000.01.T01 MTR_1g106470 62.963 54 20 0 182 235 205 258 7.81e-16 78.6
MsG0880043000.01.T01 MTR_5g005110 45.679 81 44 0 182 262 233 313 4.53e-16 80.1
MsG0880043000.01.T01 MTR_5g005110 46.154 78 42 0 470 547 233 310 4.57e-16 80.1
MsG0880043000.01.T01 MTR_3g103030 53.968 63 29 0 173 235 229 291 4.21e-15 77.0
MsG0880043000.01.T01 MTR_3g103030 53.968 63 29 0 461 523 229 291 5.55e-15 76.6
MsG0880043000.01.T01 MTR_4g131160 48.810 84 37 3 166 243 187 270 7.99e-14 73.9
MsG0880043000.01.T01 MTR_4g131160 47.059 85 39 3 454 532 187 271 8.21e-14 73.9
MsG0880043000.01.T01 MTR_4g131160 48.810 84 37 3 166 243 184 267 8.22e-14 73.9
MsG0880043000.01.T01 MTR_4g131160 47.059 85 39 3 454 532 184 268 8.45e-14 73.9
MsG0880043000.01.T01 MTR_1g080890 45.000 80 43 1 454 532 186 265 1.24e-13 72.8
MsG0880043000.01.T01 MTR_1g080890 46.835 79 41 1 166 243 186 264 1.42e-13 72.8
MsG0880043000.01.T01 MTR_1g106480 58.000 50 21 0 186 235 82 131 5.32e-13 67.4
MsG0880043000.01.T01 MTR_1g106480 62.222 45 17 0 479 523 87 131 6.51e-13 67.0
MsG0880043000.01.T01 MTR_2g067000 47.368 76 33 1 456 524 145 220 2.46e-12 68.2
MsG0880043000.01.T01 MTR_2g067000 47.368 76 33 1 168 236 145 220 5.78e-12 67.0
MsG0880043000.01.T01 MTR_1g060700 57.407 54 23 0 471 524 357 410 1.83e-11 67.0
MsG0880043000.01.T01 MTR_4g033295 56.140 57 24 1 183 238 128 184 2.67e-11 63.5
MsG0880043000.01.T01 MTR_4g033295 54.386 57 25 1 471 526 128 184 4.25e-11 62.8
MsG0880043000.01.T01 MTR_2g089070 51.852 54 26 0 471 524 146 199 6.47e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880043000.01.T01 AT3G50330 80.000 110 21 1 434 542 92 201 5.95e-44 156
MsG0880043000.01.T01 AT3G50330 72.222 126 27 3 136 254 77 201 4.55e-43 154
MsG0880043000.01.T01 AT5G67060 88.298 94 11 0 434 527 83 176 1.35e-43 155
MsG0880043000.01.T01 AT5G67060 86.170 94 13 0 146 239 83 176 1.55e-42 152
MsG0880043000.01.T01 AT5G67060 88.298 94 11 0 434 527 95 188 1.76e-43 155
MsG0880043000.01.T01 AT5G67060 72.951 122 22 2 127 239 69 188 2.02e-42 152
MsG0880043000.01.T01 AT4G00120 70.787 89 26 0 436 524 87 175 1.91e-35 132
MsG0880043000.01.T01 AT4G00120 69.318 88 27 0 148 235 87 174 1.40e-34 129
MsG0880043000.01.T01 AT3G21330 66.304 92 31 0 433 524 241 332 9.77e-35 135
MsG0880043000.01.T01 AT3G21330 64.835 91 32 0 145 235 241 331 8.60e-34 132
MsG0880043000.01.T01 AT5G09750 76.667 90 21 0 146 235 92 181 6.08e-33 126
MsG0880043000.01.T01 AT5G09750 76.667 90 21 0 434 523 92 181 1.00e-32 125
MsG0880043000.01.T01 AT5G01305 69.492 59 18 0 462 520 38 96 2.77e-20 89.0
MsG0880043000.01.T01 AT5G01305 67.797 59 19 0 174 232 38 96 4.16e-20 88.2
MsG0880043000.01.T01 AT5G43175 50.725 69 34 0 167 235 126 194 1.06e-17 82.8
MsG0880043000.01.T01 AT5G43175 50.725 69 34 0 455 523 126 194 1.37e-17 82.4
MsG0880043000.01.T01 AT4G33880 64.815 54 19 0 182 235 275 328 2.55e-17 84.0
MsG0880043000.01.T01 AT4G33880 64.815 54 19 0 470 523 275 328 3.48e-17 83.6
MsG0880043000.01.T01 AT5G37800 53.333 75 28 1 168 235 189 263 3.35e-17 83.2
MsG0880043000.01.T01 AT5G37800 53.333 75 28 1 456 523 189 263 4.39e-17 82.8
MsG0880043000.01.T01 AT1G27740 52.941 68 32 0 168 235 162 229 3.36e-17 82.0
MsG0880043000.01.T01 AT1G27740 52.941 68 32 0 456 523 162 229 4.54e-17 81.6
MsG0880043000.01.T01 AT1G66470 63.636 55 20 0 181 235 203 257 7.46e-17 82.0
MsG0880043000.01.T01 AT1G66470 63.636 55 20 0 469 523 203 257 9.87e-17 81.6
MsG0880043000.01.T01 AT2G14760 62.963 54 20 0 182 235 246 299 2.36e-16 80.9
MsG0880043000.01.T01 AT2G14760 62.963 54 20 0 470 523 246 299 3.11e-16 80.5
MsG0880043000.01.T01 AT4G30980 33.514 185 66 4 169 303 126 303 2.16e-15 77.8
MsG0880043000.01.T01 AT4G30980 51.948 77 36 1 457 532 126 202 3.01e-15 77.4
MsG0880043000.01.T01 AT2G24260 51.852 81 31 3 459 532 28 107 4.34e-15 75.9
MsG0880043000.01.T01 AT2G24260 53.165 79 29 3 171 242 28 105 4.51e-15 75.5
MsG0880043000.01.T01 AT4G30980 33.514 185 66 4 169 303 174 351 5.28e-15 77.0
MsG0880043000.01.T01 AT4G30980 51.948 77 36 1 457 532 174 250 6.11e-15 77.0
MsG0880043000.01.T01 AT2G24260 51.852 81 31 3 459 532 131 210 1.27e-14 75.9
MsG0880043000.01.T01 AT2G24260 53.165 79 29 3 171 242 131 208 1.64e-14 75.5
MsG0880043000.01.T01 AT5G58010 50.000 76 37 1 458 532 96 171 5.73e-14 73.2
MsG0880043000.01.T01 AT5G58010 50.667 75 36 1 170 243 96 170 9.43e-14 72.8
MsG0880043000.01.T01 AT2G14760 50.746 67 20 1 182 235 246 312 3.09e-13 71.6
MsG0880043000.01.T01 AT2G14760 50.746 67 20 1 470 523 246 312 4.06e-13 71.2

Find 109 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAAAACCATGGTATTAT+TGG 0.168613 8:+17416342 None:intergenic
ATCTTCACGTTTCTTCTCTT+TGG 0.198805 8:+17416045 None:intergenic
CCCTTCTTTGTCCCTCAAAA+TGG 0.232142 8:-17416577 MsG0880043000.01.T01:CDS
ACAGTTGCTGGTTCAGGATT+AGG 0.245927 8:-17418772 MsG0880043000.01.T01:CDS
ACAGTTGCTGGTTCAGGATT+AGG 0.254855 8:-17415820 MsG0880043000.01.T01:CDS
AAAGATGGACAAGTATTTAA+AGG 0.256182 8:+17416657 None:intergenic
TGTTGTTGTTGGAACCTTAA+TGG 0.283073 8:+17416240 None:intergenic
GATTCTGGGTCTATGTAAAT+TGG 0.284997 8:+17416078 None:intergenic
GATTCTGGGTCTATGTAAAT+TGG 0.284997 8:+17419030 None:intergenic
CCGTTAGATGAAGAAAATTC+AGG 0.301231 8:+17416477 None:intergenic
CAGTTAGATGAAGAAAATTC+AGG 0.301231 8:+17419429 None:intergenic
GATCGTAATGTTGATCGTTA+TGG 0.304956 8:-17415766 MsG0880043000.01.T01:CDS
TGTTGTTGTTGGAACATTAA+TGG 0.311513 8:+17419192 None:intergenic
CTTCAGGAGCCAACAGTAAA+AGG 0.313374 8:-17415843 MsG0880043000.01.T01:CDS
CAGTTGCTGGTTCAGGATTA+GGG 0.322129 8:-17415819 MsG0880043000.01.T01:CDS
AACAGAACAGTTGCTGGTTC+AGG 0.322536 8:-17418778 MsG0880043000.01.T01:CDS
AGAGATTGTGTTTGTGTTTG+TGG 0.324996 8:+17419239 None:intergenic
CAGTTGCTGGTTCAGGATTA+GGG 0.329565 8:-17418771 MsG0880043000.01.T01:intron
ACAACTCTACTGCACCATTA+AGG 0.339069 8:-17416254 MsG0880043000.01.T01:CDS
TGGTGTAGTAGAGTTGTTAT+TGG 0.339834 8:+17419212 None:intergenic
AAAAGGACAGTTGCTGGTTC+AGG 0.344600 8:-17415826 MsG0880043000.01.T01:CDS
ATAATGAAGATGACTTTAAC+TGG 0.355350 8:+17419499 None:intergenic
TCACTGCAGGAACGTGCTTC+AGG 0.355705 8:-17415859 MsG0880043000.01.T01:CDS
TCACTGCATGAACGTGCTTC+AGG 0.364081 8:-17418811 MsG0880043000.01.T01:CDS
AACCATGGTATTATTGGATT+AGG 0.366504 8:+17416348 None:intergenic
CCGTCAGATCAACAATTCTA+TGG 0.368765 8:-17416426 MsG0880043000.01.T01:CDS
GATTGTGTTTGTGTTTGTTA+TGG 0.370441 8:+17416290 None:intergenic
TAAGGCTTAGGCAATGAAAC+AGG 0.373028 8:+17415793 None:intergenic
CTCGAATTCGAAAACATTAA+CGG 0.373336 8:+17416210 None:intergenic
AGGGACAAAGAAGGGTTAAG+AGG 0.379822 8:+17416585 None:intergenic
GAAGACCATGGTATTGGATT+AGG 0.391268 8:+17419297 None:intergenic
CTCGAATTAGAAAACATTAA+CGG 0.391592 8:+17419162 None:intergenic
TGGTGCAGTAGAGTTGTTAT+TGG 0.394604 8:+17416260 None:intergenic
ATCGTAATGTTGATCGTTAT+GGG 0.398296 8:-17415765 MsG0880043000.01.T01:CDS
CCTCCGAATGCGAACCATTA+CGG 0.398684 8:-17416177 MsG0880043000.01.T01:CDS
ATGATGAAGATGACTTTAAC+TGG 0.403724 8:+17416547 None:intergenic
TTCACGTTTCTTCTCTTTGG+TGG 0.406987 8:+17416048 None:intergenic
AGCAACTGTTCTGTTATTGT+TGG 0.410949 8:+17418786 None:intergenic
GTACCGTAATGGTTTGTATT+CGG 0.415304 8:+17419126 None:intergenic
ACGGTGTTGTTTGTTGTTGT+TGG 0.421243 8:+17416229 None:intergenic
ACGGTGTTGTTTGTTGTTGT+TGG 0.421243 8:+17419181 None:intergenic
TTGACGTTTCTTCTCTTTGG+TGG 0.422338 8:+17419000 None:intergenic
AACGATCAACATTACGATCT+TGG 0.428866 8:+17415770 None:intergenic
AACAATAACAGAACAGTTGC+TGG 0.438471 8:-17418784 MsG0880043000.01.T01:CDS
TGACGGTGGAAATTGATTGA+TGG 0.444963 8:+17419392 None:intergenic
AACAGTAAAAGGACAGTTGC+TGG 0.446300 8:-17415832 MsG0880043000.01.T01:CDS
GTACCGTAATGGTTCGCATT+CGG 0.449002 8:+17416174 None:intergenic
GACCATGGTATTGGATTAGG+AGG 0.459342 8:+17419300 None:intergenic
AAGATGGACAAGTATTTAAA+GGG 0.463109 8:+17416658 None:intergenic
CATGGTATTATTGGATTAGG+AGG 0.465821 8:+17416351 None:intergenic
AAACTCGATGGCGGCGATGA+GGG 0.479160 8:-17416130 MsG0880043000.01.T01:CDS
TGACGGTTGAAATTGATTGA+TGG 0.483851 8:+17416443 None:intergenic
GAAGATGAAGACCATGGTAT+TGG 0.485579 8:+17419291 None:intergenic
AAAGATAAAGATGGAGGGAA+AGG 0.492583 8:+17416630 None:intergenic
CGTTAGATGAAGAAAATTCA+GGG 0.499125 8:+17416478 None:intergenic
GTGTTTGTGGTGGATTGTGA+AGG 0.504020 8:+17419252 None:intergenic
GCTCCGAATACAAACCATTA+CGG 0.505870 8:-17419129 MsG0880043000.01.T01:CDS
AAACTCGATGGCGGCGATGA+GGG 0.510188 8:-17419082 MsG0880043000.01.T01:CDS
AGTTAGATGAAGAAAATTCA+GGG 0.511971 8:+17419430 None:intergenic
AATAAGAATACTGCAAAGAA+TGG 0.517132 8:-17415965 MsG0880043000.01.T01:CDS
AATAAGAATACTGCAAAGAA+TGG 0.517132 8:-17418917 MsG0880043000.01.T01:CDS
GGTACCAGGTGGAACTAAGA+TGG 0.521420 8:-17415944 MsG0880043000.01.T01:CDS
GGTACCAGGTGGAACTAAGA+TGG 0.521420 8:-17418896 MsG0880043000.01.T01:CDS
ATCGAGTTTATCTTCTCTGA+TGG 0.521681 8:+17416144 None:intergenic
ATCGAGTTTCTCTTCTCAGA+TGG 0.533422 8:+17419096 None:intergenic
GATTGTGTTTGTGTTTGTGG+TGG 0.537734 8:+17419242 None:intergenic
GCATAGAATTGTTGATTTGA+CGG 0.538609 8:+17419375 None:intergenic
ATTGTTAGAAACATTTGAAG+TGG 0.540589 8:+17419353 None:intergenic
TTACGATCTTGGTAAGGCTT+AGG 0.545623 8:+17415781 None:intergenic
CTAGAAACAAAAGATAAAGA+TGG 0.553134 8:+17416621 None:intergenic
TGTGTTTGTTATGGATTGTG+AGG 0.557974 8:+17416299 None:intergenic
TAAACTCGATGGCGGCGATG+AGG 0.558838 8:-17416131 MsG0880043000.01.T01:CDS
ATGGCAACGCAGTACCGTAA+TGG 0.563985 8:+17419115 None:intergenic
GATGGATACTGCATCAATGT+TGG 0.564818 8:-17415926 MsG0880043000.01.T01:CDS
GATGGATACTGCATCAATGT+TGG 0.564818 8:-17418878 MsG0880043000.01.T01:CDS
GTGTTTGTTATGGATTGTGA+GGG 0.568107 8:+17416300 None:intergenic
CCGTAATGGTTCGCATTCGG+AGG 0.570332 8:+17416177 None:intergenic
TGGAAATTGATTGATGGTGT+TGG 0.574025 8:+17419398 None:intergenic
TCAACATTACGATCTTGGTA+AGG 0.575828 8:+17415775 None:intergenic
GAAACAAAAGATAAAGATGG+AGG 0.577358 8:+17416624 None:intergenic
GACACAGCTTAAGTCACTGC+AGG 0.580951 8:-17415872 MsG0880043000.01.T01:CDS
GTCATCTTCATTATCATCAG+AGG 0.583793 8:-17419490 MsG0880043000.01.T01:CDS
GAAACTCGATGGCGGCGATG+AGG 0.584557 8:-17419083 MsG0880043000.01.T01:CDS
ATGGAGATGAAGTACCGTAA+TGG 0.588679 8:+17416163 None:intergenic
ATGGTATTATTGGATTAGGA+GGG 0.590824 8:+17416352 None:intergenic
AAACAAAAGATAAAGATGGA+GGG 0.610409 8:+17416625 None:intergenic
CTCCTAATCCAATAATACCA+TGG 0.622724 8:-17416350 MsG0880043000.01.T01:CDS
CCATAGAATTGTTGATCTGA+CGG 0.627985 8:+17416426 None:intergenic
ATCTGAGAAGAGAAACTCGA+TGG 0.628326 8:-17419094 MsG0880043000.01.T01:CDS
GTCATCTTCATCATCATCAG+AGG 0.630073 8:-17416538 MsG0880043000.01.T01:CDS
TGTCTAGCTGCTATACTCTG+AGG 0.634069 8:+17418964 None:intergenic
TTATCTATTAAATCTGCAAG+AGG 0.636966 8:+17416375 None:intergenic
TTATCTATTAAATCTGCAAG+AGG 0.636966 8:+17419324 None:intergenic
ATCAGAGAAGATAAACTCGA+TGG 0.640111 8:-17416142 MsG0880043000.01.T01:CDS
TAGAATTGTTGATTTGACGG+TGG 0.641194 8:+17419378 None:intergenic
GTATCCATCTTAGTTCCACC+TGG 0.642640 8:+17415940 None:intergenic
GTATCCATCTTAGTTCCACC+TGG 0.642640 8:+17418892 None:intergenic
AAGGCTTAGGCAATGAAACA+GGG 0.655130 8:+17415794 None:intergenic
TGTCTAGCTGCAACACTCTG+AGG 0.655671 8:+17416012 None:intergenic
ACCATGGTATTGGATTAGGA+GGG 0.660517 8:+17419301 None:intergenic
ATACTGCAAAGAATGGTACC+AGG 0.680757 8:-17415958 MsG0880043000.01.T01:CDS
ATACTGCAAAGAATGGTACC+AGG 0.680757 8:-17418910 MsG0880043000.01.T01:CDS
TGAGAAGAGAAACTCGATGG+CGG 0.685272 8:-17419091 MsG0880043000.01.T01:CDS
ACCCTCCTAATCCAATACCA+TGG 0.687624 8:-17419302 MsG0880043000.01.T01:CDS
AATGATGAAGATGAAAACCA+TGG 0.699647 8:+17416333 None:intergenic
CTGCAAAGAATGGTACCAGG+TGG 0.704915 8:-17415955 MsG0880043000.01.T01:CDS
CTGCAAAGAATGGTACCAGG+TGG 0.704915 8:-17418907 MsG0880043000.01.T01:CDS
AGAGAAGATAAACTCGATGG+CGG 0.710472 8:-17416139 MsG0880043000.01.T01:CDS
AATGATGAAGATGAAGACCA+TGG 0.757666 8:+17419285 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCTTTCTTAATTAAAATAT+TGG - Chr8:17417011-17417030 MsG0880043000.01.T01:intron 10.0%
!! TTAGACATAATTAAAAATTA+AGG + Chr8:17417259-17417278 None:intergenic 10.0%
!! AAGTTATTAACATTACAATT+TGG + Chr8:17417747-17417766 None:intergenic 15.0%
!! AAGTTATTTGATAAATAACT+TGG + Chr8:17418466-17418485 None:intergenic 15.0%
!! ACGTTAAAAATAATTTCATT+AGG - Chr8:17416619-17416638 MsG0880043000.01.T01:CDS 15.0%
!! ATAAAATCAATCATTTGTTT+AGG - Chr8:17417149-17417168 MsG0880043000.01.T01:intron 15.0%
!! ATTGTAATGTTAATAACTTA+TGG - Chr8:17417748-17417767 MsG0880043000.01.T01:intron 15.0%
!! CGTTAAAAATAATTTCATTA+GGG - Chr8:17416620-17416639 MsG0880043000.01.T01:CDS 15.0%
!! TTGTAATGTTAATAACTTAT+GGG - Chr8:17417749-17417768 MsG0880043000.01.T01:intron 15.0%
!!! AAAATTAGTACTCTATTTTA+AGG - Chr8:17416678-17416697 MsG0880043000.01.T01:intron 15.0%
!! AAATTGTAATCTAAATTCAG+AGG - Chr8:17417060-17417079 MsG0880043000.01.T01:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG - Chr8:17417510-17417529 MsG0880043000.01.T01:intron 20.0%
!! AAGTTATTAACGTTACAATT+TGG + Chr8:17417529-17417510 None:intergenic 20.0%
!! ACTAATATGCTATCAATAAA+TGG - Chr8:17416858-17416877 MsG0880043000.01.T01:intron 20.0%
!! ATTAAGTACGAATAAAATCA+AGG + Chr8:17417884-17417903 None:intergenic 20.0%
!! ATTGTAACGTTAATAACTTA+TGG - Chr8:17417808-17417827 MsG0880043000.01.T01:intron 20.0%
!! ATTGTAACGTTAATAACTTA+TGG + Chr8:17417827-17417808 None:intergenic 20.0%
!! ATTGTAATGTTGATCATTAT+GGG - Chr8:17416555-17416574 MsG0880043000.01.T01:CDS 20.0%
!! CATGACAAAATACATAAAAT+TGG + Chr8:17416750-17416769 None:intergenic 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG - Chr8:17417720-17417739 MsG0880043000.01.T01:intron 20.0%
!! GAAACCAAAAAATAAGTTAA+GGG + Chr8:17417739-17417720 None:intergenic 20.0%
!! GAAACCAAAAATTAAGTTAA+GGG + Chr8:17417597-17417616 None:intergenic 20.0%
!! GAGATAAATTTGATTCATTA+GGG - Chr8:17416577-17416596 MsG0880043000.01.T01:CDS 20.0%
!! TTGTAACGTTAATAACTTAT+GGG - Chr8:17417809-17417828 MsG0880043000.01.T01:intron 20.0%
!! TTGTAACGTTAATAACTTAT+GGG + Chr8:17417828-17417809 None:intergenic 20.0%
!!! AGAGAATTGTAAGATATTTT+AGG - Chr8:17418279-17418298 MsG0880043000.01.T01:intron 20.0%
!!! ATTTTTGGTGAATTGTATTT+TGG - Chr8:17416954-17416973 MsG0880043000.01.T01:intron 20.0%
!!! GAATATTTGTCTTAATTTTG+TGG - Chr8:17416722-17416741 MsG0880043000.01.T01:intron 20.0%
!!! GTATTTTATCCTTTGATTTT+AGG - Chr8:17417433-17417452 MsG0880043000.01.T01:intron 20.0%
!!! TTTAGGCTTAATTACTATTT+TGG - Chr8:17417450-17417469 MsG0880043000.01.T01:intron 20.0%
! AAACAAAAGATAAAGATGGA+GGG + Chr8:17418650-17418669 None:intergenic 25.0%
! AAAGATGGACAAGTATTTAA+AGG + Chr8:17418618-17418637 None:intergenic 25.0%
! AAGATGGACAAGTATTTAAA+GGG + Chr8:17418617-17418636 None:intergenic 25.0%
! AATAAGAATACTGCAAAGAA+TGG - Chr8:17416355-17416374 MsG0880043000.01.T01:CDS 25.0%
! AATGATCAACATTACAATCT+TGG + Chr8:17416553-17416572 None:intergenic 25.0%
! AGTTAGATGAAGAAAATTCA+GGG + Chr8:17415845-17415864 None:intergenic 25.0%
! ATAATGAAGATGACTTTAAC+TGG + Chr8:17415776-17415795 None:intergenic 25.0%
! ATCTTAAATTCTTAATCCAC+TGG - Chr8:17416812-17416831 MsG0880043000.01.T01:intron 25.0%
! ATTGTTAGAAACATTTGAAG+TGG + Chr8:17415922-17415941 None:intergenic 25.0%
! CATATTTAACTGAAGCAAAA+AGG + Chr8:17417295-17417314 None:intergenic 25.0%
! CCTTAACTCTAATAACATAA+AGG - Chr8:17417657-17417676 MsG0880043000.01.T01:intron 25.0%
! CCTTTATGTTATTAGAGTTA+AGG + Chr8:17417660-17417679 None:intergenic 25.0%
! CGAAACCAAAAAATAAGTTA+AGG - Chr8:17417719-17417738 MsG0880043000.01.T01:intron 25.0%
! CGAAACCAAAAAATAAGTTA+AGG + Chr8:17417738-17417719 None:intergenic 25.0%
! CGAAACCAAAAATTAAGTTA+AGG + Chr8:17417598-17417617 None:intergenic 25.0%
! CTAGAAACAAAAGATAAAGA+TGG + Chr8:17418654-17418673 None:intergenic 25.0%
! CTCGAATTAGAAAACATTAA+CGG + Chr8:17416113-17416132 None:intergenic 25.0%
! GATTGTAATGTTGATCATTA+TGG - Chr8:17416554-17416573 MsG0880043000.01.T01:CDS 25.0%
! GGAGATAAATTTGATTCATT+AGG - Chr8:17416576-17416595 MsG0880043000.01.T01:CDS 25.0%
! GTAACCAACAAATAACTTAA+GGG - Chr8:17417780-17417799 MsG0880043000.01.T01:intron 25.0%
! GTAACCAACAAATAACTTAA+GGG + Chr8:17417799-17417780 None:intergenic 25.0%
! GTAATTAAGCCTAAAATCAA+AGG + Chr8:17417445-17417464 None:intergenic 25.0%
! TCAAGGCTTAATTAATGATT+TGG + Chr8:17417867-17417886 None:intergenic 25.0%
! TGTAACCAACAAATAACTTA+AGG - Chr8:17417779-17417798 MsG0880043000.01.T01:intron 25.0%
! TGTAACCAACAAATAACTTA+AGG + Chr8:17417798-17417779 None:intergenic 25.0%
! TTATCTATTAAATCTGCAAG+AGG + Chr8:17415951-17415970 None:intergenic 25.0%
!! ACATTGCATTTTTATTCTAG+AGG + Chr8:17417208-17417227 None:intergenic 25.0%
!! ATGCAAATCAAATTTTGTGA+AGG - Chr8:17418080-17418099 MsG0880043000.01.T01:intron 25.0%
!! TGCAAATCAAATTTTGTGAA+GGG - Chr8:17418081-17418100 MsG0880043000.01.T01:intron 25.0%
!!! CTTAATTTTTGGTTTCGTTT+TGG - Chr8:17417601-17417620 MsG0880043000.01.T01:intron 25.0%
!!! CTTATTTTTTGGTTTCGTTT+TGG + Chr8:17417651-17417632 None:intergenic 25.0%
!!! GAATCTTTGTTTTGAAGTAT+CGG + Chr8:17417237-17417256 None:intergenic 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG - Chr8:17417481-17417500 MsG0880043000.01.T01:intron 25.0%
!!! GTTATTTGTTGGTTACATTT+TGG + Chr8:17417500-17417481 None:intergenic 25.0%
AACCATGGTATTATTGGATT+AGG + Chr8:17418927-17418946 None:intergenic 30.0%
AATGATGAAGATGAAAACCA+TGG + Chr8:17418942-17418961 None:intergenic 30.0%
ACAGGAATCGGTAAATAAAA+AGG + Chr8:17417967-17417986 None:intergenic 30.0%
AGTAAGAAGAATGAATTCAC+AGG + Chr8:17417354-17417373 None:intergenic 30.0%
ATCGTAATGTTGATCGTTAT+GGG - Chr8:17419507-17419526 MsG0880043000.01.T01:CDS 30.0%
ATGATGAAGATGACTTTAAC+TGG + Chr8:17418728-17418747 None:intergenic 30.0%
ATGCAAATGATTTGAATACG+TGG + Chr8:17418409-17418428 None:intergenic 30.0%
CAGTTAGATGAAGAAAATTC+AGG + Chr8:17415846-17415865 None:intergenic 30.0%
CGTTAGATGAAGAAAATTCA+GGG + Chr8:17418797-17418816 None:intergenic 30.0%
CTCGAATTCGAAAACATTAA+CGG + Chr8:17419065-17419084 None:intergenic 30.0%
GAAAAATAGAAGATGAGCAT+AGG + Chr8:17418578-17418597 None:intergenic 30.0%
GAAACAAAAGATAAAGATGG+AGG + Chr8:17418651-17418670 None:intergenic 30.0%
GATGAAAACCATGGTATTAT+TGG + Chr8:17418933-17418952 None:intergenic 30.0%
TCAACATTACAATCTTGGTA+TGG + Chr8:17416548-17416567 None:intergenic 30.0%
TTCAAATCATTTGCATCAGA+CGG - Chr8:17418413-17418432 MsG0880043000.01.T01:intron 30.0%
! ATGGTATTATTGGATTAGGA+GGG + Chr8:17418923-17418942 None:intergenic 30.0%
! ATTTTTACGCTTTGCAAAAG+AGG + Chr8:17416908-17416927 None:intergenic 30.0%
! CCTGAATTTTCTTCATCTAA+CGG - Chr8:17415843-17415862 MsG0880043000.01.T01:CDS 30.0%
! GATTGTGTTTGTGTTTGTTA+TGG + Chr8:17418985-17419004 None:intergenic 30.0%
! GTTATTTGTTGGTTACATCT+TGG + Chr8:17417776-17417795 None:intergenic 30.0%
! TGGTCCCTTAACTTAATTTT+TGG - Chr8:17417590-17417609 MsG0880043000.01.T01:intron 30.0%
! TGTTGTTGTTGGAACATTAA+TGG + Chr8:17416083-17416102 None:intergenic 30.0%
!! ATTTTGACGTTTCTTCTCTT+TGG + Chr8:17416278-17416297 None:intergenic 30.0%
!! GCATAGAATTGTTGATTTGA+CGG + Chr8:17415900-17415919 None:intergenic 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG - Chr8:17417621-17417640 MsG0880043000.01.T01:intron 30.0%
!!! TGGTCCCTTAACTTATTTTT+TGG + Chr8:17417640-17417621 None:intergenic 30.0%
!!! TTTTTTGCATCCTCAATTAC+AGG + Chr8:17417985-17418004 None:intergenic 30.0%
AAAGATAAAGATGGAGGGAA+AGG + Chr8:17418645-17418664 None:intergenic 35.0%
AACAATAACAGAACAGTTGC+TGG - Chr8:17416488-17416507 MsG0880043000.01.T01:CDS 35.0%
AACGATCAACATTACGATCT+TGG + Chr8:17419505-17419524 None:intergenic 35.0%
AATAACATAAAGGACCAGAG+TGG - Chr8:17417667-17417686 MsG0880043000.01.T01:intron 35.0%
AATGATGAAGATGAAGACCA+TGG + Chr8:17415990-17416009 None:intergenic 35.0%
AATTCTTAATCCACTGGATC+TGG - Chr8:17416818-17416837 MsG0880043000.01.T01:intron 35.0%
AGAGATTGTGTTTGTGTTTG+TGG + Chr8:17416036-17416055 None:intergenic 35.0%
AGCAACTGTTCTGTTATTGT+TGG + Chr8:17416489-17416508 None:intergenic 35.0%
AGCTTCAATGTTACTGCATA+TGG - Chr8:17418170-17418189 MsG0880043000.01.T01:intron 35.0%
ATAAAATACCGCACCTTAAG+AGG + Chr8:17417422-17417441 None:intergenic 35.0%
ATAGAAGATGAGCATAGGAA+TGG + Chr8:17418573-17418592 None:intergenic 35.0%
ATCAGAGAAGATAAACTCGA+TGG - Chr8:17419130-17419149 MsG0880043000.01.T01:CDS 35.0%
ATCGAGTTTATCTTCTCTGA+TGG + Chr8:17419131-17419150 None:intergenic 35.0%
ATCTTCACGTTTCTTCTCTT+TGG + Chr8:17419230-17419249 None:intergenic 35.0%
CCATAGAATTGTTGATCTGA+CGG + Chr8:17418849-17418868 None:intergenic 35.0%
CCGTTAGATGAAGAAAATTC+AGG + Chr8:17418798-17418817 None:intergenic 35.0%
CTCCTAATCCAATAATACCA+TGG - Chr8:17418922-17418941 MsG0880043000.01.T01:CDS 35.0%
CTGAACCTCAAAATAAAGCA+AGG - Chr8:17418146-17418165 MsG0880043000.01.T01:intron 35.0%
GATCGTAATGTTGATCGTTA+TGG - Chr8:17419506-17419525 MsG0880043000.01.T01:CDS 35.0%
GATTCTGGGTCTATGTAAAT+TGG + Chr8:17416245-17416264 None:intergenic 35.0%
GGTAAGTTCGTTAACAATTC+CGG - Chr8:17418191-17418210 MsG0880043000.01.T01:intron 35.0%
GTCATCTTCATTATCATCAG+AGG - Chr8:17415782-17415801 MsG0880043000.01.T01:CDS 35.0%
TAAAATATTGGAGCGAGTGT+GGG - Chr8:17417023-17417042 MsG0880043000.01.T01:intron 35.0%
TCAACATTACGATCTTGGTA+AGG + Chr8:17419500-17419519 None:intergenic 35.0%
TGACGGTTGAAATTGATTGA+TGG + Chr8:17418832-17418851 None:intergenic 35.0%
TGATTTGAATACGTGGCAAA+AGG + Chr8:17418402-17418421 None:intergenic 35.0%
TGGTCCCTTAAGTTATTTGT+TGG - Chr8:17417470-17417489 MsG0880043000.01.T01:intron 35.0%
TGGTCCCTTAAGTTATTTGT+TGG + Chr8:17417489-17417470 None:intergenic 35.0%
TGGTCTCTCAAGTTATTTGT+TGG - Chr8:17417530-17417549 MsG0880043000.01.T01:intron 35.0%
TGGTCTCTTCAGTTATTTGT+TGG + Chr8:17417847-17417866 None:intergenic 35.0%
TGGTGTAGTAGAGTTGTTAT+TGG + Chr8:17416063-17416082 None:intergenic 35.0%
TTAAAATATTGGAGCGAGTG+TGG - Chr8:17417022-17417041 MsG0880043000.01.T01:intron 35.0%
TTACAATCTTGGTATGGCTT+AGG + Chr8:17416542-17416561 None:intergenic 35.0%
TTTGTCATGTTCATCATGCA+TGG - Chr8:17416761-17416780 MsG0880043000.01.T01:intron 35.0%
! CATGGTATTATTGGATTAGG+AGG + Chr8:17418924-17418943 None:intergenic 35.0%
! GCATTGTGCTGTACTTATTT+TGG - Chr8:17417910-17417929 MsG0880043000.01.T01:intron 35.0%
! GTACCGTAATGGTTTGTATT+CGG + Chr8:17416149-17416168 None:intergenic 35.0%
! TGTTGTTGTTGGAACCTTAA+TGG + Chr8:17419035-17419054 None:intergenic 35.0%
!! GATATTTTAGGCTGTAGTTG+CGG - Chr8:17418291-17418310 MsG0880043000.01.T01:intron 35.0%
!! GTGTTTGTTATGGATTGTGA+GGG + Chr8:17418975-17418994 None:intergenic 35.0%
!! TAGAATTGTTGATTTGACGG+TGG + Chr8:17415897-17415916 None:intergenic 35.0%
!! TGGAAATTGATTGATGGTGT+TGG + Chr8:17415877-17415896 None:intergenic 35.0%
!! TGTGTTTGTTATGGATTGTG+AGG + Chr8:17418976-17418995 None:intergenic 35.0%
!! TTTACCGATTCCTGTAATTG+AGG - Chr8:17417972-17417991 MsG0880043000.01.T01:intron 35.0%
!!! AGCTACCTTGCTTTATTTTG+AGG + Chr8:17418154-17418173 None:intergenic 35.0%
!!! TTATTTTGAGGTTCAGTCCT+GGG + Chr8:17418142-17418161 None:intergenic 35.0%
!!! TTGGTGGTTTTACTGATTCT+GGG + Chr8:17416259-17416278 None:intergenic 35.0%
!!! TTTATTTTGAGGTTCAGTCC+TGG + Chr8:17418143-17418162 None:intergenic 35.0%
!!! TTTGGTGGTTTTACTGATTC+TGG + Chr8:17416260-17416279 None:intergenic 35.0%
AACAGTAAAAGGACAGTTGC+TGG - Chr8:17419440-17419459 MsG0880043000.01.T01:CDS 40.0%
AAGGCTTAGGCAATGAAACA+GGG + Chr8:17419481-17419500 None:intergenic 40.0%
ACAACTCTACTGCACCATTA+AGG - Chr8:17419018-17419037 MsG0880043000.01.T01:CDS 40.0%
AGAGAAGATAAACTCGATGG+CGG - Chr8:17419133-17419152 MsG0880043000.01.T01:CDS 40.0%
ATACTGCAAAGAATGGTACC+AGG - Chr8:17416362-17416381 MsG0880043000.01.T01:CDS 40.0%
ATCGAGTTTCTCTTCTCAGA+TGG + Chr8:17416179-17416198 None:intergenic 40.0%
ATCTGAGAAGAGAAACTCGA+TGG - Chr8:17416178-17416197 MsG0880043000.01.T01:CDS 40.0%
ATGGCTTAGGCAATGAAACA+GGG + Chr8:17416529-17416548 None:intergenic 40.0%
CCGTCAGATCAACAATTCTA+TGG - Chr8:17418846-17418865 MsG0880043000.01.T01:CDS 40.0%
GAAGATGAAGACCATGGTAT+TGG + Chr8:17415984-17416003 None:intergenic 40.0%
GATGGATACTGCATCAATGT+TGG - Chr8:17416394-17416413 MsG0880043000.01.T01:CDS 40.0%
GATTGTGTTTGTGTTTGTGG+TGG + Chr8:17416033-17416052 None:intergenic 40.0%
GCATCCTCAATTACAGGAAT+CGG + Chr8:17417979-17417998 None:intergenic 40.0%
GCTCCGAATACAAACCATTA+CGG - Chr8:17416143-17416162 MsG0880043000.01.T01:CDS 40.0%
GTATGATCCATCTCGAAAAG+CGG - Chr8:17418241-17418260 MsG0880043000.01.T01:intron 40.0%
GTCATCTTCATCATCATCAG+AGG - Chr8:17418734-17418753 MsG0880043000.01.T01:intron 40.0%
TAAGGCTTAGGCAATGAAAC+AGG + Chr8:17419482-17419501 None:intergenic 40.0%
TATGGCTTAGGCAATGAAAC+AGG + Chr8:17416530-17416549 None:intergenic 40.0%
TGACGGTGGAAATTGATTGA+TGG + Chr8:17415883-17415902 None:intergenic 40.0%
TGAGCATAGGAATGGAAAAG+AGG + Chr8:17418565-17418584 None:intergenic 40.0%
TGCTAGATAGATTGGTGAGA+AGG + Chr8:17418505-17418524 None:intergenic 40.0%
TGGTGCAGTAGAGTTGTTAT+TGG + Chr8:17419015-17419034 None:intergenic 40.0%
TTACGATCTTGGTAAGGCTT+AGG + Chr8:17419494-17419513 None:intergenic 40.0%
TTACGCTTTGCAAAAGAGGA+AGG + Chr8:17416904-17416923 None:intergenic 40.0%
TTCACGTTTCTTCTCTTTGG+TGG + Chr8:17419227-17419246 None:intergenic 40.0%
TTGACGTTTCTTCTCTTTGG+TGG + Chr8:17416275-17416294 None:intergenic 40.0%
! ACCATGGTATTGGATTAGGA+GGG + Chr8:17415974-17415993 None:intergenic 40.0%
! ACTGGTTACAGTCCATTTTG+AGG + Chr8:17418710-17418729 None:intergenic 40.0%
! AGCAACTGTCCTTTTACTGT+TGG + Chr8:17419441-17419460 None:intergenic 40.0%
! CTGGTTACAGTCCATTTTGA+GGG + Chr8:17418709-17418728 None:intergenic 40.0%
! GAAGACCATGGTATTGGATT+AGG + Chr8:17415978-17415997 None:intergenic 40.0%
!! AATTGAACCGCTTTTCGAGA+TGG + Chr8:17418251-17418270 None:intergenic 40.0%
!! ACGGTGTTGTTTGTTGTTGT+TGG + Chr8:17416094-17416113 None:intergenic 40.0%
!! ATGGAGATGAAGTACCGTAA+TGG + Chr8:17419112-17419131 None:intergenic 40.0%
!! CCATTTTGAGGGACAAAGAA+GGG + Chr8:17418698-17418717 None:intergenic 40.0%
!! TCCATTTTGAGGGACAAAGA+AGG + Chr8:17418699-17418718 None:intergenic 40.0%
!!! TATTTTGAGGTTCAGTCCTG+GGG + Chr8:17418141-17418160 None:intergenic 40.0%
AAACCCTCTGCTTTATGAGC+CGG + Chr8:17418213-17418232 None:intergenic 45.0%
AACTTGGATAGTGCCCTAGT+TGG + Chr8:17418450-17418469 None:intergenic 45.0%
AATTCCGGCTCATAAAGCAG+AGG - Chr8:17418206-17418225 MsG0880043000.01.T01:intron 45.0%
ACCCTCCTAATCCAATACCA+TGG - Chr8:17415970-17415989 MsG0880043000.01.T01:CDS 45.0%
AGCCTCTCTGCTAGATAGAT+TGG + Chr8:17418513-17418532 None:intergenic 45.0%
AGGGACAAAGAAGGGTTAAG+AGG + Chr8:17418690-17418709 None:intergenic 45.0%
ATTCCGGCTCATAAAGCAGA+GGG - Chr8:17418207-17418226 MsG0880043000.01.T01:intron 45.0%
CAATTTCACACCAGATCCAG+TGG + Chr8:17416831-17416850 None:intergenic 45.0%
CACCAATCTATCTAGCAGAG+AGG - Chr8:17418508-17418527 MsG0880043000.01.T01:intron 45.0%
CCCTTCTTTGTCCCTCAAAA+TGG - Chr8:17418695-17418714 MsG0880043000.01.T01:intron 45.0%
CGAGATGGATCATACTCTGA+TGG + Chr8:17418236-17418255 None:intergenic 45.0%
CTGGAATTCCTCTTAAGGTG+CGG - Chr8:17417411-17417430 MsG0880043000.01.T01:intron 45.0%
CTTCAGGAGCCAACAGTAAA+AGG - Chr8:17419429-17419448 MsG0880043000.01.T01:CDS 45.0%
GGAGGGAAAGGAGAAAAAGA+TGG + Chr8:17418633-17418652 None:intergenic 45.0%
GTACCGTAATGGTTCGCATT+CGG + Chr8:17419101-17419120 None:intergenic 45.0%
GTATCCATCTTAGTTCCACC+TGG + Chr8:17416383-17416402 None:intergenic 45.0%
TAAAGGACCAGAGTGGTTGA+CGG - Chr8:17417674-17417693 MsG0880043000.01.T01:intron 45.0%
TGAGAAGAGAAACTCGATGG+CGG - Chr8:17416181-17416200 MsG0880043000.01.T01:CDS 45.0%
TGTCTAGCTGCTATACTCTG+AGG + Chr8:17416311-17416330 None:intergenic 45.0%
! GACCATGGTATTGGATTAGG+AGG + Chr8:17415975-17415994 None:intergenic 45.0%
!! AAAAGGACAGTTGCTGGTTC+AGG - Chr8:17419446-17419465 MsG0880043000.01.T01:CDS 45.0%
!! AACAGAACAGTTGCTGGTTC+AGG - Chr8:17416494-17416513 MsG0880043000.01.T01:CDS 45.0%
!! ACAGTTGCTGGTTCAGGATT+AGG - Chr8:17416500-17416519 MsG0880043000.01.T01:CDS 45.0%
!! CAGTTGCTGGTTCAGGATTA+GGG - Chr8:17416501-17416520 MsG0880043000.01.T01:CDS 45.0%
!! GTGTTTGTGGTGGATTGTGA+AGG + Chr8:17416023-17416042 None:intergenic 45.0%
!!! ATTTTGAGGTTCAGTCCTGG+GGG + Chr8:17418140-17418159 None:intergenic 45.0%
!! AAAATATATAAATATGAAAT+TGG + Chr8:17416939-17416958 None:intergenic 5.0%
!!! ATTTCATATTTATATATTTT+TGG - Chr8:17416939-17416958 MsG0880043000.01.T01:intron 5.0%
ATAGTGCCCTAGTTGGAGGT+GGG + Chr8:17418443-17418462 None:intergenic 50.0%
ATGGCAACGCAGTACCGTAA+TGG + Chr8:17416160-17416179 None:intergenic 50.0%
CCTCCGAATGCGAACCATTA+CGG - Chr8:17419095-17419114 MsG0880043000.01.T01:CDS 50.0%
CGCACCTTAAGAGGAATTCC+AGG + Chr8:17417413-17417432 None:intergenic 50.0%
CTGCAAAGAATGGTACCAGG+TGG - Chr8:17416365-17416384 MsG0880043000.01.T01:CDS 50.0%
GACACAGCTTAAGTCACTGC+AGG - Chr8:17416448-17416467 MsG0880043000.01.T01:CDS 50.0%
GCGTCCTGGAATTCCTCTTA+AGG - Chr8:17417406-17417425 MsG0880043000.01.T01:intron 50.0%
GGTACCAGGTGGAACTAAGA+TGG - Chr8:17416376-17416395 MsG0880043000.01.T01:CDS 50.0%
GGTTGACGGAGGAAGAGTTA+AGG - Chr8:17417688-17417707 MsG0880043000.01.T01:intron 50.0%
TCACTGCATGAACGTGCTTC+AGG - Chr8:17416461-17416480 MsG0880043000.01.T01:CDS 50.0%
TGTCTAGCTGCAACACTCTG+AGG + Chr8:17419263-17419282 None:intergenic 50.0%
TTGGATAGTGCCCTAGTTGG+AGG + Chr8:17418447-17418466 None:intergenic 50.0%
CAGATTCACGCTAAGCGTCC+TGG - Chr8:17417392-17417411 MsG0880043000.01.T01:intron 55.0%
CCGTAATGGTTCGCATTCGG+AGG + Chr8:17419098-17419117 None:intergenic 55.0%
GATAGTGCCCTAGTTGGAGG+TGG + Chr8:17418444-17418463 None:intergenic 55.0%
GCTGTAGTTGCGGCACACAA+AGG - Chr8:17418301-17418320 MsG0880043000.01.T01:intron 55.0%
TAGTGCCCTAGTTGGAGGTG+GGG + Chr8:17418442-17418461 None:intergenic 55.0%
TCACTGCAGGAACGTGCTTC+AGG - Chr8:17419413-17419432 MsG0880043000.01.T01:CDS 55.0%
TCTTCCTCCGTCAACCACTC+TGG + Chr8:17417684-17417703 None:intergenic 55.0%
! AAACTCGATGGCGGCGATGA+GGG - Chr8:17416190-17416209 MsG0880043000.01.T01:CDS 55.0%
! TAAACTCGATGGCGGCGATG+AGG - Chr8:17419141-17419160 MsG0880043000.01.T01:CDS 55.0%
AGGACCAGAGTGGTTGACGG+AGG - Chr8:17417677-17417696 MsG0880043000.01.T01:intron 60.0%
AGTGCCCTAGTTGGAGGTGG+GGG + Chr8:17418441-17418460 None:intergenic 60.0%
GGATCCCCCACCTCCAACTA+GGG - Chr8:17418434-17418453 MsG0880043000.01.T01:intron 60.0%
! GAAACTCGATGGCGGCGATG+AGG - Chr8:17416189-17416208 MsG0880043000.01.T01:CDS 60.0%
!! GAACTCGCTAGCTTTCCCCC+AGG - Chr8:17418122-17418141 MsG0880043000.01.T01:intron 60.0%
CGGATCCCCCACCTCCAACT+AGG - Chr8:17418433-17418452 MsG0880043000.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 17415762 17419532 17415762 ID=MsG0880043000.01;Name=MsG0880043000.01
Chr8 mRNA 17415762 17419532 17415762 ID=MsG0880043000.01.T01;Parent=MsG0880043000.01;Name=MsG0880043000.01.T01;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|1|2|0|560
Chr8 exon 17418772 17419532 17418772 ID=MsG0880043000.01.T01:exon:3333;Parent=MsG0880043000.01.T01
Chr8 exon 17415762 17416683 17415762 ID=MsG0880043000.01.T01:exon:3332;Parent=MsG0880043000.01.T01
Chr8 CDS 17418772 17419532 17418772 ID=MsG0880043000.01.T01:cds;Parent=MsG0880043000.01.T01
Chr8 CDS 17415762 17416683 17415762 ID=MsG0880043000.01.T01:cds;Parent=MsG0880043000.01.T01
Gene Sequence

>MsG0880043000.01.T01

ATGGATTGTAACCAGTTAAAGTCATCTTCATTATCATCAGAGGATCAAATTGACATGATGTTAATGATGATGATGCAACTCCCTGAATTTTCTTCATCTAACTGTAATAATACCAACACCATCAATCAATTTCCACCGTCAAATCAACAATTCTATGCCACTTCAAATGTTTCTAACAATACATGTCCTCTTGCAGATTTAATAGATAACCCTCCTAATCCAATACCATGGTCTTCATCTTCATCATTCACTCATTTACCTTCACAATCCACCACAAACACAAACACAATCTCTTTAACCAATAACAACTCTACTACACCATTAATGTTCCAACAACAACAAACAACACCGTTAATGTTTTCTAATTCGAGCAACGAGATTGCTCCGAATACAAACCATTACGGTACTGCGTTGCCATCTGAGAAGAGAAACTCGATGGCGGCGATGAGGGAGATGATATTCAAAATAGCAGCTATGCAACCAATTTACATAGACCCAGAATCAGTAAAACCACCAAAGAGAAGAAACGTCAAAATTTCAAAAGATCCTCAGAGTATAGCAGCTAGACACAGAAGAGAAAGAATAAGCGAGAAAATAAGAATACTGCAAAGAATGGTACCAGGTGGAACTAAGATGGATACTGCATCAATGTTGGATGAAGCTATTCATTATGTTAAGTTTCTCAAGACACAGCTTAAGTCACTGCATGAACGTGCTTCAGGAGCCAACAATAACAGAACAGTTGCTGGTTCAGGATTAGGTTACCCTTTAAATACTTGTCCATCTTTTTCTCCTTTCCCTCCATCTTTATCTTTTGTTTCTAGTTTCACTTCTCTTCCTCTTAACCCTTCTTTGTCCCTCAAAATGGACTGTAACCAGTTAAAGTCATCTTCATCATCATCAGAGGATCAAATTGACATGATGTTAATGATGATGATGCAACTCCCTGAATTTTCTTCATCTAACGGTAATAACAACACCATCAATCAATTTCAACCGTCAGATCAACAATTCTATGGCACTTCAAATGCTTCTAACAATACACATCCTCTTGCAGATTTAATAGATAACCCTCCTAATCCAATAATACCATGGTTTTCATCTTCATCATTCATTCACTTACCCTCACAATCCATAACAAACACAAACACAATCTCTTTCACCAATAACAACTCTACTGCACCATTAAGGTTCCAACAACAACAAACAACACCGTTAATGTTTTCGAATTCGAGCAATGAGATTCCTCCGAATGCGAACCATTACGGTACTTCATCTCCATCAGAGAAGATAAACTCGATGGCGGCGATGAGGGAGATGATATTCAGAATAGCAGCGATGCAACCAATTTACATAGACCCAGAATCAGTAAAACCACCAAAGAGAAGAAACGTGAAGATTTCAAAAGATCCTCAGAGTGTTGCAGCTAGACACAGAAGAGAAAGAATAAGCGAGAAAATAAGAATACTGCAAAGAATGGTACCAGGTGGAACTAAGATGGATACTGCATCAATGTTGGATGAAGCTATTCATTATGTTAAGTTTCTCAAGACACAGCTTAAGTCACTGCAGGAACGTGCTTCAGGAGCCAACAGTAAAAGGACAGTTGCTGGTTCAGGATTAGGGTTCCCTGTTTCATTGCCTAAGCCTTACCAAGATCGTAATGTTGATCGTTATGGGTGA
Protein sequence

>MsG0880043000.01.T01

MDCNQLKSSSLSSEDQIDMMLMMMMQLPEFSSSNCNNTNTINQFPPSNQQFYATSNVSNNTCPLADLIDNPPNPIPWSSSSSFTHLPSQSTTNTNTISLTNNNSTTPLMFQQQQTTPLMFSNSSNEIAPNTNHYGTALPSEKRNSMAAMREMIFKIAAMQPIYIDPESVKPPKRRNVKISKDPQSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKSLHERASGANNNRTVAGSGLGYPLNTCPSFSPFPPSLSFVSSFTSLPLNPSLSLKMDCNQLKSSSSSSEDQIDMMLMMMMQLPEFSSSNGNNNTINQFQPSDQQFYGTSNASNNTHPLADLIDNPPNPIIPWFSSSSFIHLPSQSITNTNTISFTNNNSTAPLRFQQQQTTPLMFSNSSNEIPPNANHYGTSSPSEKINSMAAMREMIFRIAAMQPIYIDPESVKPPKRRNVKISKDPQSVAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKSLQERASGANSKRTVAGSGLGFPVSLPKPYQDRNVDRYG*