Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044009.01.T01 | XP_039686869.1 | 81.746 | 126 | 23 | 0 | 31 | 156 | 109 | 234 | 2.90E-69 | 233 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044009.01.T01 | Q9SWG3 | 46.457 | 127 | 67 | 1 | 31 | 156 | 123 | 249 | 7.94E-34 | 135 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044009.01.T01 | A0A2K3NBU0 | 81.746 | 126 | 23 | 0 | 31 | 156 | 105 | 230 | 1.20e-66 | 232 |
Gene ID | Type | Classification |
---|---|---|
MsG0880044009.01.T01 | TF | FAR1 |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044009.01.T01 | MTR_1g008290 | 68.000 | 125 | 37 | 1 | 31 | 155 | 23 | 144 | 1.37e-59 | 189 |
MsG0880044009.01.T01 | MTR_5g032260 | 69.697 | 66 | 20 | 0 | 31 | 96 | 340 | 405 | 1.13e-24 | 103 |
MsG0880044009.01.T01 | MTR_6g051425 | 26.400 | 125 | 91 | 1 | 33 | 156 | 95 | 219 | 2.93e-14 | 73.2 |
MsG0880044009.01.T01 | MTR_0402s0040 | 33.333 | 96 | 64 | 0 | 46 | 141 | 114 | 209 | 3.10e-12 | 67.8 |
MsG0880044009.01.T01 | MTR_1g070355 | 32.787 | 122 | 78 | 3 | 33 | 152 | 149 | 268 | 4.68e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880044009.01.T01 | AT4G15090 | 46.457 | 127 | 67 | 1 | 31 | 156 | 123 | 249 | 8.10e-35 | 135 |
MsG0880044009.01.T01 | AT4G15090 | 46.457 | 127 | 67 | 1 | 31 | 156 | 123 | 249 | 8.10e-35 | 135 |
MsG0880044009.01.T01 | AT4G15090 | 46.457 | 127 | 67 | 1 | 31 | 156 | 123 | 249 | 8.10e-35 | 135 |
MsG0880044009.01.T01 | AT4G15090 | 46.457 | 127 | 67 | 1 | 31 | 156 | 123 | 249 | 8.10e-35 | 135 |
MsG0880044009.01.T01 | AT4G15090 | 46.457 | 127 | 67 | 1 | 31 | 156 | 123 | 249 | 8.10e-35 | 135 |
MsG0880044009.01.T01 | AT1G76320 | 37.821 | 156 | 90 | 2 | 2 | 156 | 37 | 186 | 5.10e-27 | 112 |
MsG0880044009.01.T01 | AT1G76320 | 37.821 | 156 | 90 | 2 | 2 | 156 | 37 | 186 | 5.13e-27 | 112 |
MsG0880044009.01.T01 | AT1G76320 | 37.821 | 156 | 90 | 2 | 2 | 156 | 37 | 186 | 5.14e-27 | 112 |
MsG0880044009.01.T01 | AT1G76320 | 37.821 | 156 | 90 | 2 | 2 | 156 | 37 | 186 | 5.14e-27 | 112 |
MsG0880044009.01.T01 | AT4G38180 | 39.200 | 125 | 74 | 2 | 31 | 154 | 148 | 271 | 3.22e-22 | 98.2 |
MsG0880044009.01.T01 | AT3G22170 | 36.508 | 126 | 58 | 1 | 31 | 156 | 155 | 258 | 6.34e-22 | 97.4 |
MsG0880044009.01.T01 | AT3G22170 | 36.508 | 126 | 58 | 1 | 31 | 156 | 155 | 258 | 6.34e-22 | 97.4 |
Find 48 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCGCACTCTTCATTCTTCT+TGG | 0.180645 | 8:+34263143 | None:intergenic |
TCCAACTGTCGATTCATTAT+TGG | 0.183004 | 8:+34262946 | None:intergenic |
GAAAATGGGATGCTCAAATT+TGG | 0.245201 | 8:+34262352 | None:intergenic |
TGGTTTGCTTGTTCACTATA+AGG | 0.279141 | 8:+34262437 | None:intergenic |
TTCATATCCTCCATATTGTT+TGG | 0.293868 | 8:+34263655 | None:intergenic |
GCCACTCTGGCCAAACAATA+TGG | 0.314518 | 8:-34263665 | MsG0880044009.01.T01:CDS |
TATGTAGAAAACTACATTAA+AGG | 0.354080 | 8:-34263312 | MsG0880044009.01.T01:intron |
TCAATTGCATAAAAGAATCT+TGG | 0.356205 | 8:+34263512 | None:intergenic |
TCGGCGTTTGACATTAGAAT+TGG | 0.359495 | 8:-34263585 | MsG0880044009.01.T01:CDS |
AAGATAATATTGCCAATTGC+AGG | 0.364862 | 8:-34262322 | MsG0880044009.01.T01:CDS |
CTCCATCTTATCCCTGCAAT+TGG | 0.415863 | 8:+34262310 | None:intergenic |
ATCAGAAATCATTTAGATAT+AGG | 0.417224 | 8:-34263608 | MsG0880044009.01.T01:CDS |
TTCATTATTGGAAACATTTG+AGG | 0.423471 | 8:+34262958 | None:intergenic |
TAAGATGGAGTTTGATATGT+TGG | 0.426227 | 8:-34262297 | MsG0880044009.01.T01:CDS |
TTAAAGGAATTTCTAGAAGA+AGG | 0.426397 | 8:-34263296 | MsG0880044009.01.T01:CDS |
CATTATTTCCTTTGCCATAG+AGG | 0.426978 | 8:-34263758 | MsG0880044009.01.T01:CDS |
CGGCGTTTGACATTAGAATT+GGG | 0.436883 | 8:-34263584 | MsG0880044009.01.T01:CDS |
CCTAAAAGAGCAAACACAAA+AGG | 0.444959 | 8:-34263170 | MsG0880044009.01.T01:CDS |
GAATTAATGGAAGTTGTTGA+TGG | 0.448629 | 8:-34264190 | None:intergenic |
AATGATGACAATGTTATTGA+TGG | 0.455364 | 8:-34264166 | MsG0880044009.01.T01:CDS |
ATGAAGAGTGCGATCGAGAA+AGG | 0.456471 | 8:-34263134 | MsG0880044009.01.T01:CDS |
AGGAAATAATGTGCATATGC+TGG | 0.467902 | 8:+34263770 | None:intergenic |
TGCCAATTGCAGGGATAAGA+TGG | 0.472879 | 8:-34262312 | MsG0880044009.01.T01:CDS |
CTAAAAGAGCAAACACAAAA+GGG | 0.481195 | 8:-34263169 | MsG0880044009.01.T01:CDS |
CCAATGACACATTGAAAACA+TGG | 0.481690 | 8:+34262417 | None:intergenic |
TCCAATAATGAATCGACAGT+TGG | 0.489597 | 8:-34262947 | MsG0880044009.01.T01:CDS |
TGAGGATGTGAATCACATAA+TGG | 0.500588 | 8:-34262390 | MsG0880044009.01.T01:CDS |
ATGGGATGCTCAAATTTGGT+AGG | 0.511405 | 8:+34262356 | None:intergenic |
TATTGATTCCTCTATGGCAA+AGG | 0.524300 | 8:+34263750 | None:intergenic |
ATATCATATACATGTTACTC+TGG | 0.540706 | 8:-34262269 | MsG0880044009.01.T01:CDS |
AATTAATGGAAGTTGTTGAT+GGG | 0.547188 | 8:-34264189 | None:intergenic |
ATTGAAACTATGCAAGATGT+TGG | 0.548761 | 8:-34263710 | MsG0880044009.01.T01:CDS |
TCCATATTGTTTGGCCAGAG+TGG | 0.548986 | 8:+34263664 | None:intergenic |
TCAATGTTTCATCAAGTGCA+TGG | 0.549754 | 8:+34263240 | None:intergenic |
CAATGTGTCATTGGAAGATG+AGG | 0.555062 | 8:-34262408 | MsG0880044009.01.T01:CDS |
GACAGTTGGATCAAGAAGAA+TGG | 0.557946 | 8:-34262933 | MsG0880044009.01.T01:intron |
GGGAGATGCAAATGCAATGT+TGG | 0.559895 | 8:-34263564 | MsG0880044009.01.T01:CDS |
AAGCAAAATTTATGCCACTC+TGG | 0.565072 | 8:-34263678 | MsG0880044009.01.T01:CDS |
TTGTTTAAAGGTGGAATGTG+AGG | 0.581351 | 8:-34263873 | MsG0880044009.01.T01:intron |
AGATAATATTGCCAATTGCA+GGG | 0.596647 | 8:-34262321 | MsG0880044009.01.T01:CDS |
GAAATCATTTAGATATAGGT+CGG | 0.597092 | 8:-34263604 | MsG0880044009.01.T01:CDS |
TATGGAGGATATGAAAACAT+TGG | 0.602190 | 8:-34263647 | MsG0880044009.01.T01:CDS |
TGTTGAGAATGATTCATGTA+CGG | 0.602674 | 8:-34264116 | MsG0880044009.01.T01:intron |
TGGGATGCTCAAATTTGGTA+GGG | 0.604384 | 8:+34262357 | None:intergenic |
ATGATGACAATGTTATTGAT+GGG | 0.630031 | 8:-34264165 | MsG0880044009.01.T01:CDS |
TTACTCTGGTTGTGAAGCAG+TGG | 0.633644 | 8:-34262255 | MsG0880044009.01.T01:CDS |
TAAAAGAGCAAACACAAAAG+GGG | 0.662600 | 8:-34263168 | MsG0880044009.01.T01:CDS |
ACTCTGGCCAAACAATATGG+AGG | 0.695583 | 8:-34263662 | MsG0880044009.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATCTTTTTCATTGAAAA+TGG | + | Chr8:34264100-34264119 | None:intergenic | 15.0% |
!!! | TTATCTTTTTCATTGAAAAT+GGG | + | Chr8:34264099-34264118 | None:intergenic | 15.0% |
!! | AACAACAATTTGAAGATAAA+TGG | - | Chr8:34262954-34262973 | MsG0880044009.01.T01:CDS | 20.0% |
!! | ATCAGAAATCATTTAGATAT+AGG | - | Chr8:34262826-34262845 | MsG0880044009.01.T01:intron | 20.0% |
!! | CGTATTAAAAAAAATTGTGA+TGG | - | Chr8:34262592-34262611 | MsG0880044009.01.T01:intron | 20.0% |
!! | TACACACAAATAAATATCAT+TGG | - | Chr8:34263875-34263894 | MsG0880044009.01.T01:intron | 20.0% |
!! | TATGTAGAAAACTACATTAA+AGG | - | Chr8:34263122-34263141 | MsG0880044009.01.T01:CDS | 20.0% |
!!! | AAAAAAATTGTGATGGAAAA+TGG | - | Chr8:34262599-34262618 | MsG0880044009.01.T01:intron | 20.0% |
!!! | ATTCTTTTATGCAATTGATT+TGG | - | Chr8:34262927-34262946 | MsG0880044009.01.T01:intron | 20.0% |
! | AACTAGTTGCAAAGTAAAAA+AGG | - | Chr8:34263335-34263354 | MsG0880044009.01.T01:intron | 25.0% |
! | AATGATGACAATGTTATTGA+TGG | - | Chr8:34262268-34262287 | MsG0880044009.01.T01:CDS | 25.0% |
! | ATATCATATACATGTTACTC+TGG | - | Chr8:34264165-34264184 | MsG0880044009.01.T01:CDS | 25.0% |
! | ATGATGACAATGTTATTGAT+GGG | - | Chr8:34262269-34262288 | MsG0880044009.01.T01:CDS | 25.0% |
! | GAAATCATTTAGATATAGGT+CGG | - | Chr8:34262830-34262849 | MsG0880044009.01.T01:intron | 25.0% |
! | GTGGAAAAATTTCAACTATT+GGG | - | Chr8:34262986-34263005 | MsG0880044009.01.T01:CDS | 25.0% |
! | TATTCACTAAAGAAAAACGT+TGG | - | Chr8:34263828-34263847 | MsG0880044009.01.T01:CDS | 25.0% |
! | TCAAATTTCATTCCAATGTA+TGG | + | Chr8:34262364-34262383 | None:intergenic | 25.0% |
! | TCAATTGCATAAAAGAATCT+TGG | + | Chr8:34262925-34262944 | None:intergenic | 25.0% |
! | TGACAAAACAAAAGACAATT+AGG | + | Chr8:34263587-34263606 | None:intergenic | 25.0% |
! | TTCATTATTGGAAACATTTG+AGG | + | Chr8:34263479-34263498 | None:intergenic | 25.0% |
!! | ATTTTCACAGGAAAATCATT+AGG | - | Chr8:34263606-34263625 | MsG0880044009.01.T01:CDS | 25.0% |
!! | TTAAAGGAATTTCTAGAAGA+AGG | - | Chr8:34263138-34263157 | MsG0880044009.01.T01:CDS | 25.0% |
!! | TTTTCACAGGAAAATCATTA+GGG | - | Chr8:34263607-34263626 | MsG0880044009.01.T01:CDS | 25.0% |
!!! | AACGTGAATGATACATTTTT+TGG | - | Chr8:34263038-34263057 | MsG0880044009.01.T01:intron | 25.0% |
!!! | AAGTTTTGAGAGTTACAATT+TGG | - | Chr8:34263167-34263186 | MsG0880044009.01.T01:CDS | 25.0% |
!!! | TTTTGTTTTGTCATTTTCAC+AGG | - | Chr8:34263594-34263613 | MsG0880044009.01.T01:CDS | 25.0% |
AAGATAATATTGCCAATTGC+AGG | - | Chr8:34264112-34264131 | MsG0880044009.01.T01:intron | 30.0% | |
AGACTAGATGATGATTCAAT+TGG | - | Chr8:34263682-34263701 | MsG0880044009.01.T01:CDS | 30.0% | |
AGATAATATTGCCAATTGCA+GGG | - | Chr8:34264113-34264132 | MsG0880044009.01.T01:intron | 30.0% | |
ATTGAAACTATGCAAGATGT+TGG | - | Chr8:34262724-34262743 | MsG0880044009.01.T01:intron | 30.0% | |
CTAAAAGAGCAAACACAAAA+GGG | - | Chr8:34263265-34263284 | MsG0880044009.01.T01:CDS | 30.0% | |
GGTGGAAAAATTTCAACTAT+TGG | - | Chr8:34262985-34263004 | MsG0880044009.01.T01:CDS | 30.0% | |
TAAAAGAGCAAACACAAAAG+GGG | - | Chr8:34263266-34263285 | MsG0880044009.01.T01:CDS | 30.0% | |
TAAAATTAGTCGTCGTTCAA+AGG | - | Chr8:34262448-34262467 | MsG0880044009.01.T01:CDS | 30.0% | |
TAAATCACCTCAGAATAATG+TGG | + | Chr8:34263531-34263550 | None:intergenic | 30.0% | |
TAAGATGGAGTTTGATATGT+TGG | - | Chr8:34264137-34264156 | MsG0880044009.01.T01:CDS | 30.0% | |
TATGGAGGATATGAAAACAT+TGG | - | Chr8:34262787-34262806 | MsG0880044009.01.T01:intron | 30.0% | |
TGAAGATAAATGGCATGAAA+TGG | - | Chr8:34262964-34262983 | MsG0880044009.01.T01:CDS | 30.0% | |
TGTTGAGAATGATTCATGTA+CGG | - | Chr8:34262318-34262337 | MsG0880044009.01.T01:CDS | 30.0% | |
TTCATATCCTCCATATTGTT+TGG | + | Chr8:34262782-34262801 | None:intergenic | 30.0% | |
! | AAATATCATTGGTAGTTAGC+TGG | - | Chr8:34263886-34263905 | MsG0880044009.01.T01:intron | 30.0% |
! | ATGATGATGTGATAATCAAC+TGG | - | Chr8:34263713-34263732 | MsG0880044009.01.T01:CDS | 30.0% |
!!! | ATGTTGTTTTAGAGACTTGT+TGG | - | Chr8:34263645-34263664 | MsG0880044009.01.T01:CDS | 30.0% |
!!! | GAGTTTTATTGATTCCTCTA+TGG | + | Chr8:34262693-34262712 | None:intergenic | 30.0% |
!!! | GTGAATGATACATTTTTTGG+TGG | - | Chr8:34263041-34263060 | MsG0880044009.01.T01:intron | 30.0% |
!!! | TTTCTAGTTTTGTATAGACC+TGG | + | Chr8:34263948-34263967 | None:intergenic | 30.0% |
AAATCTGCGTCGTTGTTTAA+AGG | - | Chr8:34262549-34262568 | MsG0880044009.01.T01:intron | 35.0% | |
AAGCAAAATTTATGCCACTC+TGG | - | Chr8:34262756-34262775 | MsG0880044009.01.T01:intron | 35.0% | |
AGAATGATTCATGTACGGTT+GGG | - | Chr8:34262323-34262342 | MsG0880044009.01.T01:CDS | 35.0% | |
AGATAAATGGCATGAAATGG+TGG | - | Chr8:34262967-34262986 | MsG0880044009.01.T01:CDS | 35.0% | |
AGGAAAATCATTAGGGTTCA+AGG | - | Chr8:34263614-34263633 | MsG0880044009.01.T01:CDS | 35.0% | |
AGGAAATAATGTGCATATGC+TGG | + | Chr8:34262667-34262686 | None:intergenic | 35.0% | |
ATCAACTGGATCTCTTTATG+AGG | - | Chr8:34263727-34263746 | MsG0880044009.01.T01:CDS | 35.0% | |
CATTATTTCCTTTGCCATAG+AGG | - | Chr8:34262676-34262695 | MsG0880044009.01.T01:intron | 35.0% | |
CCAATGACACATTGAAAACA+TGG | + | Chr8:34264020-34264039 | None:intergenic | 35.0% | |
CCTAAAAGAGCAAACACAAA+AGG | - | Chr8:34263264-34263283 | MsG0880044009.01.T01:CDS | 35.0% | |
CTAATGAAAGAGCCATACAT+TGG | - | Chr8:34262349-34262368 | MsG0880044009.01.T01:CDS | 35.0% | |
CTGGAAAAAGCTCATGATTA+TGG | + | Chr8:34262648-34262667 | None:intergenic | 35.0% | |
GAAAATGGGATGCTCAAATT+TGG | + | Chr8:34264085-34264104 | None:intergenic | 35.0% | |
TCAATGTTTCATCAAGTGCA+TGG | + | Chr8:34263197-34263216 | None:intergenic | 35.0% | |
TCCAATAATGAATCGACAGT+TGG | - | Chr8:34263487-34263506 | MsG0880044009.01.T01:intron | 35.0% | |
TGAGGATGTGAATCACATAA+TGG | - | Chr8:34264044-34264063 | MsG0880044009.01.T01:intron | 35.0% | |
TTCAACTATTGGGAAATGAG+TGG | - | Chr8:34262996-34263015 | MsG0880044009.01.T01:intron | 35.0% | |
TTGTTTAAAGGTGGAATGTG+AGG | - | Chr8:34262561-34262580 | MsG0880044009.01.T01:intron | 35.0% | |
! | CCATGTTTTCAATGTGTCAT+TGG | - | Chr8:34264017-34264036 | MsG0880044009.01.T01:intron | 35.0% |
! | CCTTTTGTGTTTGCTCTTTT+AGG | + | Chr8:34263267-34263286 | None:intergenic | 35.0% |
! | GCTCTGACATTTTCAAAGAT+TGG | + | Chr8:34263239-34263258 | None:intergenic | 35.0% |
!! | TATTGATTCCTCTATGGCAA+AGG | + | Chr8:34262687-34262706 | None:intergenic | 35.0% |
!! | TCCAACTGTCGATTCATTAT+TGG | + | Chr8:34263491-34263510 | None:intergenic | 35.0% |
!! | TGGTTTGCTTGTTCACTATA+AGG | + | Chr8:34264000-34264019 | None:intergenic | 35.0% |
ACTTATGCTCGCACAAGATA+CGG | - | Chr8:34262502-34262521 | MsG0880044009.01.T01:intron | 40.0% | |
ATCGCACTCTTCATTCTTCT+TGG | + | Chr8:34263294-34263313 | None:intergenic | 40.0% | |
ATGGGATGCTCAAATTTGGT+AGG | + | Chr8:34264081-34264100 | None:intergenic | 40.0% | |
ATTACGCTGTCTGTTGGATT+TGG | - | Chr8:34262416-34262435 | MsG0880044009.01.T01:CDS | 40.0% | |
CGGCGTTTGACATTAGAATT+GGG | - | Chr8:34262850-34262869 | MsG0880044009.01.T01:intron | 40.0% | |
GACAGTTGGATCAAGAAGAA+TGG | - | Chr8:34263501-34263520 | MsG0880044009.01.T01:intron | 40.0% | |
GAGAATGATTCATGTACGGT+TGG | - | Chr8:34262322-34262341 | MsG0880044009.01.T01:CDS | 40.0% | |
TCGGCGTTTGACATTAGAAT+TGG | - | Chr8:34262849-34262868 | MsG0880044009.01.T01:intron | 40.0% | |
TGGGATGCTCAAATTTGGTA+GGG | + | Chr8:34264080-34264099 | None:intergenic | 40.0% | |
TGGTATGCCACATTATTCTG+AGG | - | Chr8:34263521-34263540 | MsG0880044009.01.T01:CDS | 40.0% | |
TTACGCTGTCTGTTGGATTT+GGG | - | Chr8:34262417-34262436 | MsG0880044009.01.T01:CDS | 40.0% | |
! | CAATGTGTCATTGGAAGATG+AGG | - | Chr8:34264026-34264045 | MsG0880044009.01.T01:intron | 40.0% |
ACACTCATTACGCTGTCTGT+TGG | - | Chr8:34262410-34262429 | MsG0880044009.01.T01:CDS | 45.0% | |
ACTCTGGCCAAACAATATGG+AGG | - | Chr8:34262772-34262791 | MsG0880044009.01.T01:intron | 45.0% | |
ATGATTCATGTACGGTTGGG+AGG | - | Chr8:34262326-34262345 | MsG0880044009.01.T01:CDS | 45.0% | |
CTCCATCTTATCCCTGCAAT+TGG | + | Chr8:34264127-34264146 | None:intergenic | 45.0% | |
CTTATGCTCGCACAAGATAC+GGG | - | Chr8:34262503-34262522 | MsG0880044009.01.T01:intron | 45.0% | |
GGGAGATGCAAATGCAATGT+TGG | - | Chr8:34262870-34262889 | MsG0880044009.01.T01:intron | 45.0% | |
TCCATATTGTTTGGCCAGAG+TGG | + | Chr8:34262773-34262792 | None:intergenic | 45.0% | |
TCTGCGTCGTTGTTTAAAGG+TGG | - | Chr8:34262552-34262571 | MsG0880044009.01.T01:intron | 45.0% | |
TGCCAATTGCAGGGATAAGA+TGG | - | Chr8:34264122-34264141 | MsG0880044009.01.T01:CDS | 45.0% | |
TTACTCTGGTTGTGAAGCAG+TGG | - | Chr8:34264179-34264198 | MsG0880044009.01.T01:CDS | 45.0% | |
! | ATGAAGAGTGCGATCGAGAA+AGG | - | Chr8:34263300-34263319 | MsG0880044009.01.T01:CDS | 45.0% |
GCCACTCTGGCCAAACAATA+TGG | - | Chr8:34262769-34262788 | MsG0880044009.01.T01:intron | 50.0% | |
TGCTAACATGTCTCTCGTCC+AGG | - | Chr8:34263927-34263946 | MsG0880044009.01.T01:intron | 50.0% | |
! | ACGACGCAGATTTTGTGCAG+TGG | + | Chr8:34262542-34262561 | None:intergenic | 50.0% |
CACAAGATACGGGAAGACGC+GGG | - | Chr8:34262513-34262532 | MsG0880044009.01.T01:intron | 55.0% | |
GCACAAGATACGGGAAGACG+CGG | - | Chr8:34262512-34262531 | MsG0880044009.01.T01:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 34262250 | 34264206 | 34262250 | ID=MsG0880044009.01;Name=MsG0880044009.01 |
Chr8 | mRNA | 34262250 | 34264206 | 34262250 | ID=MsG0880044009.01.T01;Parent=MsG0880044009.01;Name=MsG0880044009.01.T01;_AED=0.30;_eAED=0.32;_QI=0|0|0|0.8|1|1|5|0|343 |
Chr8 | exon | 34264117 | 34264206 | 34264117 | ID=MsG0880044009.01.T01:exon:8243;Parent=MsG0880044009.01.T01 |
Chr8 | exon | 34263508 | 34263885 | 34263508 | ID=MsG0880044009.01.T01:exon:8242;Parent=MsG0880044009.01.T01 |
Chr8 | exon | 34263100 | 34263327 | 34263100 | ID=MsG0880044009.01.T01:exon:8241;Parent=MsG0880044009.01.T01 |
Chr8 | exon | 34262934 | 34263011 | 34262934 | ID=MsG0880044009.01.T01:exon:8240;Parent=MsG0880044009.01.T01 |
Chr8 | exon | 34262250 | 34262507 | 34262250 | ID=MsG0880044009.01.T01:exon:8239;Parent=MsG0880044009.01.T01 |
Chr8 | CDS | 34264117 | 34264206 | 34264117 | ID=MsG0880044009.01.T01:cds;Parent=MsG0880044009.01.T01 |
Chr8 | CDS | 34263508 | 34263885 | 34263508 | ID=MsG0880044009.01.T01:cds;Parent=MsG0880044009.01.T01 |
Chr8 | CDS | 34263100 | 34263327 | 34263100 | ID=MsG0880044009.01.T01:cds;Parent=MsG0880044009.01.T01 |
Chr8 | CDS | 34262934 | 34263011 | 34262934 | ID=MsG0880044009.01.T01:cds;Parent=MsG0880044009.01.T01 |
Chr8 | CDS | 34262250 | 34262507 | 34262250 | ID=MsG0880044009.01.T01:cds;Parent=MsG0880044009.01.T01 |
Gene Sequence |
Protein sequence |