AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044167.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044167.01.T01 MTR_8g442460 88.095 42 5 0 30 71 65 106 3.86e-22 82.4
MsG0880044167.01.T01 MTR_8g442310 81.395 43 8 0 20 62 550 592 1.31e-17 75.5
MsG0880044167.01.T01 MTR_8g051640 81.395 43 8 0 20 62 563 605 1.45e-17 75.1
MsG0880044167.01.T01 MTR_8g051540 87.500 40 5 0 22 61 598 637 2.48e-17 74.7
MsG0880044167.01.T01 MTR_8g442370 76.744 43 10 0 20 62 584 626 1.20e-16 72.8
MsG0880044167.01.T01 MTR_8g442340 85.000 40 6 0 22 61 539 578 1.69e-16 72.4
MsG0880044167.01.T01 MTR_8g052490 78.049 41 9 0 22 62 181 221 2.97e-16 71.2
MsG0880044167.01.T01 MTR_8g052080 78.049 41 9 0 22 62 603 643 3.22e-16 71.2
MsG0880044167.01.T01 MTR_8g052050 78.049 41 9 0 22 62 602 642 4.66e-16 70.9
MsG0880044167.01.T01 MTR_1g081665 78.049 41 9 0 22 62 545 585 4.83e-16 70.9
MsG0880044167.01.T01 MTR_8g052513 78.049 41 9 0 22 62 580 620 6.01e-16 70.5
MsG0880044167.01.T01 MTR_8g051600 74.419 43 11 0 20 62 589 631 8.05e-16 70.5
MsG0880044167.01.T01 MTR_8g052060 78.049 41 9 0 22 62 559 599 8.52e-16 70.1
MsG0880044167.01.T01 MTR_8g052290 75.610 41 10 0 22 62 207 247 9.82e-16 70.1
MsG0880044167.01.T01 MTR_8g052190 75.610 41 10 0 22 62 594 634 1.22e-15 69.7
MsG0880044167.01.T01 MTR_8g052190 75.610 41 10 0 22 62 595 635 1.22e-15 69.7
MsG0880044167.01.T01 MTR_8g052120 75.610 41 10 0 22 62 573 613 1.95e-15 69.3
MsG0880044167.01.T01 MTR_8g052420 75.610 41 10 0 22 62 583 623 2.24e-15 68.9
MsG0880044167.01.T01 MTR_8g051890 57.895 57 23 1 1 56 18 74 2.41e-15 65.9
MsG0880044167.01.T01 MTR_8g052570 75.610 41 10 0 22 62 180 220 3.32e-15 68.6
MsG0880044167.01.T01 MTR_8g052517 75.610 41 10 0 22 62 180 220 3.32e-15 68.6
MsG0880044167.01.T01 MTR_8g442270 72.093 43 12 0 20 62 594 636 4.19e-15 68.2
MsG0880044167.01.T01 MTR_8g052200 73.171 41 11 0 22 62 580 620 1.12e-14 67.0
MsG0880044167.01.T01 MTR_8g052170 73.171 41 11 0 22 62 154 194 1.92e-14 66.2
MsG0880044167.01.T01 MTR_2g081805 60.417 48 19 0 14 61 237 284 4.43e-13 62.4
MsG0880044167.01.T01 MTR_1g052850 62.791 43 16 0 20 62 18 60 4.81e-13 60.5
MsG0880044167.01.T01 MTR_1g104890 61.538 52 15 1 22 68 461 512 4.82e-13 62.4
MsG0880044167.01.T01 MTR_1g104890 61.538 52 15 1 22 68 461 512 5.03e-13 62.4
MsG0880044167.01.T01 MTR_2g011210 61.538 52 15 1 22 68 644 695 5.25e-13 62.4
MsG0880044167.01.T01 MTR_2g011180 61.538 52 15 1 22 68 648 699 5.57e-13 62.4
MsG0880044167.01.T01 MTR_2g011180 61.538 52 15 1 22 68 648 699 6.18e-13 62.0
MsG0880044167.01.T01 MTR_2g011150 61.538 52 15 1 22 68 578 629 7.03e-13 62.0
MsG0880044167.01.T01 MTR_5g065130 55.000 60 26 1 3 61 437 496 8.58e-13 61.6
MsG0880044167.01.T01 MTR_2g081500 56.140 57 24 1 7 62 604 660 8.89e-13 61.6
MsG0880044167.01.T01 MTR_8g465150 65.116 43 15 0 20 62 632 674 1.02e-12 61.6
MsG0880044167.01.T01 MTR_1g105700 47.945 73 31 3 2 68 460 531 1.13e-12 61.2
MsG0880044167.01.T01 MTR_8g465160 65.116 43 15 0 20 62 634 676 1.15e-12 61.2
MsG0880044167.01.T01 MTR_4g081675 57.143 56 23 1 7 61 605 660 1.19e-12 61.2
MsG0880044167.01.T01 MTR_4g091570 59.615 52 16 1 22 68 872 923 1.32e-12 61.2
MsG0880044167.01.T01 MTR_1g105655 63.415 41 15 0 22 62 461 501 1.47e-12 60.8
MsG0880044167.01.T01 MTR_4g081685 52.941 68 26 3 7 68 606 673 1.83e-12 60.8
MsG0880044167.01.T01 MTR_7g056450 71.053 38 11 0 22 59 626 663 2.21e-12 60.5
MsG0880044167.01.T01 MTR_1g052880 61.538 52 15 1 22 68 824 875 2.29e-12 60.5
MsG0880044167.01.T01 MTR_3g415610 65.000 40 14 0 22 61 340 379 2.30e-12 60.5
MsG0880044167.01.T01 MTR_7g056450 71.053 38 11 0 22 59 636 673 2.30e-12 60.5
MsG0880044167.01.T01 MTR_7g056510 59.615 52 16 1 22 68 636 687 2.42e-12 60.5
MsG0880044167.01.T01 MTR_7g056510 59.615 52 16 1 22 68 626 677 2.63e-12 60.5
MsG0880044167.01.T01 MTR_1g021610 67.500 40 13 0 22 61 469 508 2.72e-12 60.5
MsG0880044167.01.T01 MTR_8g028895 62.791 43 16 0 20 62 73 115 3.15e-12 59.7
MsG0880044167.01.T01 MTR_4g091670 51.389 72 29 2 3 68 630 701 3.17e-12 60.1
MsG0880044167.01.T01 MTR_4g040480 67.500 40 13 0 22 61 629 668 3.33e-12 60.1
MsG0880044167.01.T01 MTR_4g091760 57.407 54 18 1 20 68 645 698 3.33e-12 60.1
MsG0880044167.01.T01 MTR_3g011910 59.615 52 16 1 22 68 444 495 3.33e-12 60.1
MsG0880044167.01.T01 MTR_4g091800 64.286 42 15 0 20 61 470 511 3.43e-12 60.1
MsG0880044167.01.T01 MTR_4g091680 62.791 43 16 0 20 62 603 645 3.56e-12 60.1
MsG0880044167.01.T01 MTR_2g081470 47.143 70 27 1 2 61 588 657 3.63e-12 60.1
MsG0880044167.01.T01 MTR_7g056680 59.615 52 16 1 22 68 623 674 3.78e-12 59.7
MsG0880044167.01.T01 MTR_7g056680 59.615 52 16 1 22 68 618 669 3.85e-12 59.7
MsG0880044167.01.T01 MTR_5g005530 67.500 40 13 0 22 61 445 484 3.85e-12 59.7
MsG0880044167.01.T01 MTR_7g056680 59.615 52 16 1 22 68 619 670 3.93e-12 59.7
MsG0880044167.01.T01 MTR_7g056680 59.615 52 16 1 22 68 614 665 3.96e-12 59.7
MsG0880044167.01.T01 MTR_7g056680 59.615 52 16 1 22 68 458 509 3.97e-12 59.7
MsG0880044167.01.T01 MTR_3g011910 65.854 41 14 0 22 62 470 510 4.13e-12 59.7
MsG0880044167.01.T01 MTR_4g091690 57.407 54 18 1 20 68 656 709 4.92e-12 59.7
MsG0880044167.01.T01 MTR_4g091780 57.407 54 18 1 20 68 639 692 4.96e-12 59.7
MsG0880044167.01.T01 MTR_4g091670 54.098 61 27 1 3 62 630 690 4.98e-12 59.7
MsG0880044167.01.T01 MTR_4g081640 55.357 56 24 1 7 61 569 624 5.25e-12 59.3
MsG0880044167.01.T01 MTR_1g105800 62.791 43 16 0 20 62 451 493 5.32e-12 59.3
MsG0880044167.01.T01 MTR_8g465980 66.667 42 14 0 20 61 606 647 5.47e-12 59.3
MsG0880044167.01.T01 MTR_4g091840 64.286 42 15 0 20 61 650 691 5.53e-12 59.3
MsG0880044167.01.T01 MTR_1g105820 65.854 41 14 0 22 62 455 495 6.54e-12 59.3
MsG0880044167.01.T01 MTR_7g056667 55.769 52 18 1 22 68 639 690 6.72e-12 59.3
MsG0880044167.01.T01 MTR_4g091850 64.286 42 15 0 20 61 648 689 6.72e-12 59.3
MsG0880044167.01.T01 MTR_1g021642 65.000 40 14 0 22 61 474 513 6.81e-12 59.3
MsG0880044167.01.T01 MTR_1g105840 67.500 40 13 0 22 61 478 517 7.15e-12 58.9
MsG0880044167.01.T01 MTR_1g021632 62.500 40 15 0 22 61 467 506 7.50e-12 58.9
MsG0880044167.01.T01 MTR_8g061110 75.000 36 9 0 20 55 522 557 7.75e-12 58.9
MsG0880044167.01.T01 MTR_7g056650 63.415 41 15 0 22 62 477 517 7.88e-12 58.9
MsG0880044167.01.T01 MTR_8g041660 61.905 42 16 0 20 61 451 492 8.13e-12 58.9
MsG0880044167.01.T01 MTR_8g041660 61.905 42 16 0 20 61 451 492 8.18e-12 58.9
MsG0880044167.01.T01 MTR_1g105650 65.000 40 14 0 22 61 471 510 8.19e-12 58.9
MsG0880044167.01.T01 MTR_1g105835 55.769 52 18 1 22 68 154 205 8.69e-12 58.9
MsG0880044167.01.T01 MTR_4g091860 61.905 42 16 0 22 63 636 677 8.92e-12 58.9
MsG0880044167.01.T01 MTR_7g056623 63.415 41 15 0 22 62 592 632 9.47e-12 58.9
MsG0880044167.01.T01 MTR_4g091820 64.286 42 15 0 20 61 648 689 9.79e-12 58.5
MsG0880044167.01.T01 MTR_8g465990 65.854 41 14 0 20 60 584 624 9.82e-12 58.5
MsG0880044167.01.T01 MTR_8g465990 65.854 41 14 0 20 60 622 662 9.93e-12 58.5
MsG0880044167.01.T01 MTR_7g056510 63.415 41 15 0 22 62 636 676 1.14e-11 58.5
MsG0880044167.01.T01 MTR_7g056640 63.415 41 15 0 22 62 634 674 1.16e-11 58.5
MsG0880044167.01.T01 MTR_6g012810 65.000 40 14 0 22 61 718 757 1.24e-11 58.5
MsG0880044167.01.T01 MTR_4g081655 57.407 54 18 1 20 68 655 708 1.25e-11 58.5
MsG0880044167.01.T01 MTR_6g012810 65.000 40 14 0 22 61 718 757 1.29e-11 58.5
MsG0880044167.01.T01 MTR_2g011280 55.357 56 24 1 7 61 627 682 1.32e-11 58.2
MsG0880044167.01.T01 MTR_1g105750 63.415 41 15 0 22 62 454 494 1.37e-11 58.2
MsG0880044167.01.T01 MTR_7g056657 60.976 41 16 0 22 62 39 79 1.39e-11 56.6
MsG0880044167.01.T01 MTR_2g011270 55.357 56 24 1 7 61 607 662 1.40e-11 58.2
MsG0880044167.01.T01 MTR_6g083980 64.865 37 13 0 26 62 170 206 1.44e-11 57.4
MsG0880044167.01.T01 MTR_8g041880 62.500 40 15 0 22 61 459 498 1.46e-11 58.2
MsG0880044167.01.T01 MTR_4g081655 64.286 42 15 0 20 61 655 696 1.52e-11 58.2
MsG0880044167.01.T01 MTR_1g105755 60.465 43 17 0 20 62 403 445 1.60e-11 58.2
MsG0880044167.01.T01 MTR_2g011230 57.692 52 17 1 22 68 633 684 1.60e-11 58.2
MsG0880044167.01.T01 MTR_3g011930 57.692 52 17 1 22 68 313 364 1.70e-11 58.2
MsG0880044167.01.T01 MTR_0341s0020 59.524 42 17 0 20 61 460 501 1.74e-11 58.2
MsG0880044167.01.T01 MTR_1g021630 59.524 42 17 0 20 61 484 525 1.77e-11 58.2
MsG0880044167.01.T01 MTR_7g056647 60.976 41 16 0 22 62 487 527 1.86e-11 57.8
MsG0880044167.01.T01 MTR_7g056420 57.692 52 17 1 22 68 958 1009 1.87e-11 57.8
MsG0880044167.01.T01 MTR_8g041890 61.702 47 14 1 22 64 460 506 1.93e-11 57.8
MsG0880044167.01.T01 MTR_7g056647 60.976 41 16 0 22 62 649 689 1.99e-11 57.8
MsG0880044167.01.T01 MTR_2g011160 64.103 39 14 0 22 60 650 688 2.01e-11 57.8
MsG0880044167.01.T01 MTR_4g081655 64.286 42 15 0 20 61 620 661 2.03e-11 57.8
MsG0880044167.01.T01 MTR_7g056430 57.692 52 17 1 22 68 958 1009 2.04e-11 57.8
MsG0880044167.01.T01 MTR_2g011240 53.571 56 25 1 7 61 604 659 2.21e-11 57.8
MsG0880044167.01.T01 MTR_1g105725 75.758 33 8 0 22 54 482 514 2.29e-11 57.8
MsG0880044167.01.T01 MTR_1g105595 59.091 44 18 0 22 65 417 460 2.30e-11 57.8
MsG0880044167.01.T01 MTR_4g081750 51.786 56 26 1 7 61 945 1000 2.32e-11 57.8
MsG0880044167.01.T01 MTR_1g105595 59.091 44 18 0 22 65 464 507 2.38e-11 57.8
MsG0880044167.01.T01 MTR_8g041820 65.789 38 13 0 22 59 52 89 2.38e-11 57.0
MsG0880044167.01.T01 MTR_4g091730 72.222 36 10 0 20 55 583 618 2.41e-11 57.8
MsG0880044167.01.T01 MTR_0148s0080 55.556 54 19 1 20 68 826 879 2.53e-11 57.4
MsG0880044167.01.T01 MTR_4g081665 51.786 56 26 1 7 61 598 653 2.97e-11 57.4
MsG0880044167.01.T01 MTR_8g041670 59.524 42 17 0 20 61 237 278 2.98e-11 57.4
MsG0880044167.01.T01 MTR_6g083980 64.865 37 13 0 26 62 170 206 3.61e-11 56.6
MsG0880044167.01.T01 MTR_8g041690 60.000 40 16 0 22 61 460 499 3.80e-11 57.0
MsG0880044167.01.T01 MTR_1g105640 53.846 52 19 1 22 68 453 504 3.95e-11 57.0
MsG0880044167.01.T01 MTR_4g117040 58.140 43 18 0 20 62 562 604 4.05e-11 57.0
MsG0880044167.01.T01 MTR_1g105640 53.846 52 19 1 22 68 453 504 4.06e-11 57.0
MsG0880044167.01.T01 MTR_4g098890 58.333 48 18 1 22 67 1183 1230 4.12e-11 57.0
MsG0880044167.01.T01 MTR_8g465570 55.357 56 24 1 7 61 569 624 4.17e-11 57.0
MsG0880044167.01.T01 MTR_1g105640 53.846 52 19 1 22 68 453 504 4.19e-11 57.0
MsG0880044167.01.T01 MTR_6g083980 64.865 37 13 0 26 62 170 206 4.24e-11 57.0
MsG0880044167.01.T01 MTR_1g021635 60.000 40 16 0 22 61 476 515 4.27e-11 57.0
MsG0880044167.01.T01 MTR_7g056590 60.976 41 16 0 22 62 480 520 4.32e-11 57.0
MsG0880044167.01.T01 MTR_3g037690 64.286 42 15 0 20 61 46 87 4.49e-11 56.2
MsG0880044167.01.T01 MTR_4g117030 58.140 43 18 0 20 62 523 565 4.50e-11 57.0
MsG0880044167.01.T01 MTR_5g005450 65.789 38 13 0 22 59 442 479 4.89e-11 56.6
MsG0880044167.01.T01 MTR_0090s0020 64.286 42 15 0 20 61 613 654 5.18e-11 56.6
MsG0880044167.01.T01 MTR_0090s0020 64.286 42 15 0 20 61 613 654 5.61e-11 56.6
MsG0880044167.01.T01 MTR_7g056663 57.692 52 17 2 22 68 643 694 6.00e-11 56.6
MsG0880044167.01.T01 MTR_8g465470 55.357 56 24 1 7 61 639 694 6.12e-11 56.6
MsG0880044167.01.T01 MTR_8g087740 56.098 41 18 0 22 62 787 827 6.72e-11 56.2
MsG0880044167.01.T01 MTR_5g068290 65.000 40 14 0 22 61 271 310 6.75e-11 56.2
MsG0880044167.01.T01 MTR_0090s0020 64.286 42 15 0 20 61 613 654 6.91e-11 56.2
MsG0880044167.01.T01 MTR_0090s0020 64.286 42 15 0 20 61 613 654 6.98e-11 56.2
MsG0880044167.01.T01 MTR_4g117020 55.814 43 19 0 20 62 562 604 7.42e-11 56.2
MsG0880044167.01.T01 MTR_1g105730 64.865 37 13 0 26 62 7 43 8.50e-11 55.1
MsG0880044167.01.T01 MTR_1g105710 46.667 60 30 2 2 60 448 506 8.72e-11 55.8
MsG0880044167.01.T01 MTR_5g068250 46.575 73 32 3 2 68 442 513 9.44e-11 55.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044167.01.T01 AT1G11350 73.171 41 11 0 22 62 629 669 3.98e-14 65.5
MsG0880044167.01.T01 AT1G11330 72.500 40 11 0 22 61 641 680 9.59e-14 64.3
MsG0880044167.01.T01 AT1G11330 72.500 40 11 0 22 61 639 678 1.01e-13 64.3
MsG0880044167.01.T01 AT1G11330 72.500 40 11 0 22 61 641 680 1.03e-13 64.3
MsG0880044167.01.T01 AT1G65790 59.259 54 17 1 20 68 634 687 1.36e-13 63.9
MsG0880044167.01.T01 AT1G65800 59.259 54 17 1 20 68 638 691 1.53e-13 63.9
MsG0880044167.01.T01 AT4G23150 50.000 68 28 2 7 68 437 504 9.71e-13 61.6
MsG0880044167.01.T01 AT1G67520 60.465 43 17 0 20 62 611 653 1.02e-12 61.6
MsG0880044167.01.T01 AT1G67520 60.465 43 17 0 20 62 568 610 1.03e-12 61.6
MsG0880044167.01.T01 AT1G67520 63.415 41 15 0 20 60 403 443 1.03e-12 61.6
MsG0880044167.01.T01 AT1G67520 63.415 41 15 0 20 60 403 443 1.03e-12 61.6
MsG0880044167.01.T01 AT1G67520 60.465 43 17 0 20 62 536 578 1.03e-12 61.6
MsG0880044167.01.T01 AT1G67520 63.415 41 15 0 20 60 374 414 1.09e-12 61.6
MsG0880044167.01.T01 AT4G23180 66.667 42 14 0 20 61 463 504 1.11e-12 61.6
MsG0880044167.01.T01 AT1G67520 60.465 43 17 0 20 62 618 660 1.11e-12 61.6
MsG0880044167.01.T01 AT1G67520 60.465 43 17 0 20 62 611 653 1.13e-12 61.2
MsG0880044167.01.T01 AT4G23270 61.364 44 17 0 20 63 441 484 1.55e-12 60.8
MsG0880044167.01.T01 AT4G23270 61.364 44 17 0 20 63 441 484 1.61e-12 60.8
MsG0880044167.01.T01 AT4G23270 61.364 44 17 0 20 63 441 484 1.61e-12 60.8
MsG0880044167.01.T01 AT4G23240 51.389 72 29 2 3 68 125 196 1.66e-12 60.8
MsG0880044167.01.T01 AT4G23140 64.286 42 15 0 20 61 466 507 1.96e-12 60.8
MsG0880044167.01.T01 AT4G23140 64.286 42 15 0 20 61 466 507 1.98e-12 60.8
MsG0880044167.01.T01 AT4G23160 55.556 54 19 1 20 68 474 527 2.27e-12 60.5
MsG0880044167.01.T01 AT4G23240 54.098 61 27 1 3 62 432 492 2.90e-12 60.1
MsG0880044167.01.T01 AT4G03230 59.259 54 17 1 20 68 705 758 3.05e-12 60.1
MsG0880044167.01.T01 AT4G03230 59.259 54 17 1 20 68 705 758 3.05e-12 60.1
MsG0880044167.01.T01 AT4G03230 59.259 54 17 1 20 68 733 786 3.08e-12 60.1
MsG0880044167.01.T01 AT4G03230 68.293 41 13 0 20 60 648 688 3.13e-12 60.1
MsG0880044167.01.T01 AT4G23280 55.556 54 19 1 20 68 457 510 3.14e-12 60.1
MsG0880044167.01.T01 AT4G23280 55.556 54 19 1 20 68 459 512 3.17e-12 60.1
MsG0880044167.01.T01 AT4G03230 68.293 41 13 0 20 60 640 680 3.19e-12 60.1
MsG0880044167.01.T01 AT4G21380 66.667 42 14 0 20 61 641 682 3.26e-12 60.1
MsG0880044167.01.T01 AT4G03230 59.259 54 17 1 20 68 647 700 3.32e-12 60.1
MsG0880044167.01.T01 AT3G16030 62.500 40 15 0 22 61 521 560 3.40e-12 60.1
MsG0880044167.01.T01 AT4G03230 68.293 41 13 0 20 60 805 845 3.50e-12 60.1
MsG0880044167.01.T01 AT4G03230 68.293 41 13 0 20 60 805 845 3.50e-12 60.1
MsG0880044167.01.T01 AT1G61400 59.615 52 16 1 22 68 617 668 3.69e-12 60.1
MsG0880044167.01.T01 AT4G23310 55.556 54 19 1 20 68 583 636 3.95e-12 59.7
MsG0880044167.01.T01 AT4G23180 66.667 42 14 0 20 61 463 504 3.97e-12 59.7
MsG0880044167.01.T01 AT3G16030 62.500 40 15 0 22 61 665 704 4.06e-12 59.7
MsG0880044167.01.T01 AT1G11300 70.000 40 12 0 22 61 626 665 4.07e-12 59.7
MsG0880044167.01.T01 AT1G11303 70.000 40 12 0 22 61 626 665 4.11e-12 59.7
MsG0880044167.01.T01 AT3G16030 62.500 40 15 0 22 61 665 704 4.13e-12 59.7
MsG0880044167.01.T01 AT3G16030 62.500 40 15 0 22 61 665 704 4.24e-12 59.7
MsG0880044167.01.T01 AT1G61400 59.615 52 16 1 22 68 625 676 4.28e-12 59.7
MsG0880044167.01.T01 AT4G23310 55.556 54 19 1 20 68 623 676 4.28e-12 59.7
MsG0880044167.01.T01 AT1G11300 70.000 40 12 0 22 61 611 650 4.49e-12 59.7
MsG0880044167.01.T01 AT4G23320 59.259 54 17 1 20 68 319 372 4.54e-12 59.7
MsG0880044167.01.T01 AT4G23320 59.259 54 17 1 20 68 298 351 4.72e-12 59.7
MsG0880044167.01.T01 AT4G23320 59.259 54 17 1 20 68 298 351 4.72e-12 59.7
MsG0880044167.01.T01 AT4G23220 60.000 50 19 1 7 55 437 486 5.16e-12 59.7
MsG0880044167.01.T01 AT4G11460 57.407 54 18 1 20 68 464 517 5.38e-12 59.3
MsG0880044167.01.T01 AT3G16030 62.500 40 15 0 22 61 644 683 5.41e-12 59.3
MsG0880044167.01.T01 AT4G23130 55.556 54 19 1 20 68 459 512 5.69e-12 59.3
MsG0880044167.01.T01 AT4G23130 55.556 54 19 1 20 68 455 508 5.80e-12 59.3
MsG0880044167.01.T01 AT4G23130 55.556 54 19 1 20 68 459 512 5.88e-12 59.3
MsG0880044167.01.T01 AT4G11460 64.286 42 15 0 20 61 386 427 6.14e-12 59.3
MsG0880044167.01.T01 AT4G23180 66.667 42 14 0 20 61 463 504 7.40e-12 58.9
MsG0880044167.01.T01 AT4G11460 64.286 42 15 0 20 61 461 502 7.42e-12 58.9
MsG0880044167.01.T01 AT4G23250 57.407 54 18 1 20 68 469 522 7.96e-12 58.9
MsG0880044167.01.T01 AT4G23260 57.407 54 18 1 20 68 454 507 8.01e-12 58.9
MsG0880044167.01.T01 AT4G23250 57.407 54 18 1 20 68 469 522 8.03e-12 58.9
MsG0880044167.01.T01 AT4G23260 57.407 54 18 1 20 68 443 496 8.08e-12 58.9
MsG0880044167.01.T01 AT4G23290 59.259 54 17 1 20 68 478 531 8.18e-12 58.9
MsG0880044167.01.T01 AT4G23290 59.259 54 17 1 20 68 435 488 8.74e-12 58.9
MsG0880044167.01.T01 AT4G23250 57.407 54 18 1 20 68 474 527 9.11e-12 58.9
MsG0880044167.01.T01 AT4G11530 60.465 43 17 0 20 62 467 509 1.06e-11 58.5
MsG0880044167.01.T01 AT1G61500 55.769 52 18 1 22 68 590 641 1.19e-11 58.5
MsG0880044167.01.T01 AT1G61430 55.769 52 18 1 22 68 583 634 1.25e-11 58.5
MsG0880044167.01.T01 AT1G61430 55.769 52 18 1 22 68 583 634 1.25e-11 58.5
MsG0880044167.01.T01 AT1G61430 55.769 52 18 1 22 68 583 634 1.25e-11 58.5
MsG0880044167.01.T01 AT1G61500 55.769 52 18 1 22 68 613 664 1.25e-11 58.5
MsG0880044167.01.T01 AT1G61430 55.769 52 18 1 22 68 583 634 1.27e-11 58.5
MsG0880044167.01.T01 AT1G61430 55.769 52 18 1 22 68 609 660 1.28e-11 58.5
MsG0880044167.01.T01 AT1G61430 55.769 52 18 1 22 68 606 657 1.30e-11 58.5
MsG0880044167.01.T01 AT1G61430 55.769 52 18 1 22 68 606 657 1.30e-11 58.5
MsG0880044167.01.T01 AT1G61430 55.769 52 18 1 22 68 606 657 1.31e-11 58.5
MsG0880044167.01.T01 AT1G61500 55.769 52 18 1 22 68 608 659 1.31e-11 58.5
MsG0880044167.01.T01 AT1G61430 55.769 52 18 1 22 68 609 660 1.35e-11 58.5
MsG0880044167.01.T01 AT1G61490 53.846 52 19 1 22 68 607 658 1.39e-11 58.2
MsG0880044167.01.T01 AT1G61490 53.846 52 19 1 22 68 607 658 1.39e-11 58.2
MsG0880044167.01.T01 AT1G61490 53.846 52 19 1 22 68 607 658 1.39e-11 58.2
MsG0880044167.01.T01 AT1G61490 53.846 52 19 1 22 68 607 658 1.39e-11 58.2
MsG0880044167.01.T01 AT4G11480 57.407 54 18 1 20 68 439 492 1.40e-11 58.2
MsG0880044167.01.T01 AT4G11480 57.407 54 18 1 20 68 436 489 1.41e-11 58.2
MsG0880044167.01.T01 AT4G11480 64.286 42 15 0 20 61 439 480 1.42e-11 58.2
MsG0880044167.01.T01 AT4G11480 57.407 54 18 1 20 68 444 497 1.45e-11 58.2
MsG0880044167.01.T01 AT4G23230 61.905 42 16 0 20 61 452 493 1.49e-11 58.2
MsG0880044167.01.T01 AT4G11470 64.286 42 15 0 20 61 454 495 1.56e-11 58.2
MsG0880044167.01.T01 AT4G11470 64.286 42 15 0 20 61 459 500 1.57e-11 58.2
MsG0880044167.01.T01 AT4G05200 63.415 41 15 0 22 62 482 522 1.59e-11 58.2
MsG0880044167.01.T01 AT4G05200 63.415 41 15 0 22 62 464 504 1.68e-11 58.2
MsG0880044167.01.T01 AT4G23190 61.905 42 16 0 20 61 465 506 1.71e-11 58.2
MsG0880044167.01.T01 AT4G23190 61.905 42 16 0 20 61 465 506 1.75e-11 58.2
MsG0880044167.01.T01 AT1G61380 55.769 52 18 1 22 68 458 509 1.93e-11 57.8
MsG0880044167.01.T01 AT4G23280 61.905 42 16 0 20 61 409 450 2.16e-11 57.8
MsG0880044167.01.T01 AT1G61490 53.846 52 19 1 22 68 457 508 2.23e-11 57.8
MsG0880044167.01.T01 AT1G61380 55.769 52 18 1 22 68 605 656 2.32e-11 57.8
MsG0880044167.01.T01 AT1G61490 53.846 52 19 1 22 68 581 632 2.63e-11 57.4
MsG0880044167.01.T01 AT1G61490 53.846 52 19 1 22 68 581 632 2.63e-11 57.4
MsG0880044167.01.T01 AT4G04540 64.103 39 14 0 22 60 441 479 2.90e-11 57.4
MsG0880044167.01.T01 AT4G04540 64.103 39 14 0 22 60 470 508 3.05e-11 57.4
MsG0880044167.01.T01 AT4G11900 72.222 36 10 0 20 55 583 618 3.11e-11 57.4
MsG0880044167.01.T01 AT4G11900 72.222 36 10 0 20 55 583 618 3.13e-11 57.4
MsG0880044167.01.T01 AT4G04540 64.103 39 14 0 22 60 470 508 3.17e-11 57.4
MsG0880044167.01.T01 AT1G61440 53.846 52 19 1 22 68 625 676 3.20e-11 57.4
MsG0880044167.01.T01 AT4G04540 64.103 39 14 0 22 60 470 508 3.22e-11 57.4
MsG0880044167.01.T01 AT1G61440 53.846 52 19 1 22 68 595 646 3.32e-11 57.4
MsG0880044167.01.T01 AT4G21410 64.103 39 14 0 22 60 474 512 3.40e-11 57.4
MsG0880044167.01.T01 AT4G21410 64.103 39 14 0 22 60 349 387 3.44e-11 57.4
MsG0880044167.01.T01 AT4G04570 60.976 41 16 0 22 62 465 505 3.50e-11 57.0
MsG0880044167.01.T01 AT4G11900 72.222 36 10 0 20 55 652 687 3.55e-11 57.0
MsG0880044167.01.T01 AT4G04500 55.769 52 18 1 22 68 462 513 3.57e-11 57.0
MsG0880044167.01.T01 AT1G61610 68.421 38 12 0 22 59 642 679 3.62e-11 57.0
MsG0880044167.01.T01 AT1G61440 53.846 52 19 1 22 68 600 651 3.67e-11 57.0
MsG0880044167.01.T01 AT1G61610 68.421 38 12 0 22 59 642 679 3.71e-11 57.0
MsG0880044167.01.T01 AT4G04570 60.976 41 16 0 22 62 465 505 3.73e-11 57.0
MsG0880044167.01.T01 AT4G04510 59.524 42 17 0 22 63 458 499 3.75e-11 57.0
MsG0880044167.01.T01 AT4G04510 59.524 42 17 0 22 63 456 497 3.97e-11 57.0
MsG0880044167.01.T01 AT4G11900 72.222 36 10 0 20 55 652 687 3.99e-11 57.0
MsG0880044167.01.T01 AT4G11900 72.222 36 10 0 20 55 652 687 3.99e-11 57.0
MsG0880044167.01.T01 AT4G11900 72.222 36 10 0 20 55 652 687 4.01e-11 57.0
MsG0880044167.01.T01 AT4G11900 72.222 36 10 0 20 55 652 687 4.11e-11 57.0
MsG0880044167.01.T01 AT4G11900 72.222 36 10 0 20 55 652 687 4.11e-11 57.0
MsG0880044167.01.T01 AT4G23190 61.905 42 16 0 20 61 387 428 4.16e-11 57.0
MsG0880044167.01.T01 AT4G23190 61.905 42 16 0 20 61 387 428 4.16e-11 57.0
MsG0880044167.01.T01 AT4G21410 64.103 39 14 0 22 60 474 512 4.30e-11 57.0
MsG0880044167.01.T01 AT4G04570 64.103 39 14 0 22 60 301 339 4.66e-11 56.6
MsG0880044167.01.T01 AT4G04500 64.103 39 14 0 22 60 462 500 4.78e-11 56.6
MsG0880044167.01.T01 AT4G04500 64.103 39 14 0 22 60 462 500 4.78e-11 56.6
MsG0880044167.01.T01 AT4G21390 55.769 52 18 1 22 68 646 697 4.97e-11 56.6
MsG0880044167.01.T01 AT4G04490 64.103 39 14 0 22 60 457 495 4.98e-11 56.6
MsG0880044167.01.T01 AT4G21390 55.769 52 18 1 22 68 646 697 5.63e-11 56.6
MsG0880044167.01.T01 AT4G21400 61.538 39 15 0 22 60 367 405 5.73e-11 56.6
MsG0880044167.01.T01 AT4G21400 61.538 39 15 0 22 60 506 544 6.13e-11 56.6
MsG0880044167.01.T01 AT4G21400 61.538 39 15 0 22 60 506 544 6.13e-11 56.6
MsG0880044167.01.T01 AT4G21400 61.538 39 15 0 22 60 506 544 6.13e-11 56.6
MsG0880044167.01.T01 AT4G21400 61.538 39 15 0 22 60 468 506 6.18e-11 56.6
MsG0880044167.01.T01 AT4G21400 61.538 39 15 0 22 60 466 504 6.54e-11 56.2
MsG0880044167.01.T01 AT4G21400 61.538 39 15 0 22 60 466 504 6.68e-11 56.2
MsG0880044167.01.T01 AT4G27300 59.524 42 17 0 20 61 615 656 6.79e-11 56.2
MsG0880044167.01.T01 AT4G21400 61.538 39 15 0 22 60 478 516 6.88e-11 56.2
MsG0880044167.01.T01 AT4G38830 69.444 36 11 0 20 55 459 494 7.22e-11 56.2

Find 10 sgRNAs with CRISPR-Local

Find 17 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACACCAAAATCAGATATTT+TGG 0.101659 8:-36792940 None:intergenic
AACCCCAAAATATCTGATTT+TGG 0.267500 8:+36792936 MsG0880044167.01.T01:CDS
AAACGTTTAAGCATATTATA+AGG 0.339136 8:+36792817 MsG0880044167.01.T01:CDS
CTATATCTTCACAAATATCA+AGG 0.459287 8:+36792856 MsG0880044167.01.T01:CDS
AATTATCCACACAGATTTGA+AGG 0.473061 8:+36792884 MsG0880044167.01.T01:CDS
TCTTCACAAATATCAAGGCT+CGG 0.583504 8:+36792861 MsG0880044167.01.T01:CDS
ATATTATAAGGAATTTCTCA+AGG 0.594217 8:+36792829 MsG0880044167.01.T01:CDS
TACAAAACAAGAAACCGAAG+TGG 0.620591 8:+36792974 MsG0880044167.01.T01:CDS
TGTGGGCTACTCAGAAAACT+CGG 0.639198 8:+36793004 MsG0880044167.01.T01:CDS
TACTAGCCTTCAAATCTGTG+TGG 0.647538 8:-36792890 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACGTTTAAGCATATTATA+AGG + Chr8:36792817-36792836 MsG0880044167.01.T01:CDS 20.0%
!! ATATTATAAGGAATTTCTCA+AGG + Chr8:36792829-36792848 MsG0880044167.01.T01:CDS 20.0%
! CTATATCTTCACAAATATCA+AGG + Chr8:36792856-36792875 MsG0880044167.01.T01:CDS 25.0%
!! ACACCAAAATCAGATATTTT+GGG - Chr8:36792942-36792961 None:intergenic 25.0%
AATTATCCACACAGATTTGA+AGG + Chr8:36792884-36792903 MsG0880044167.01.T01:CDS 30.0%
! AACCCCAAAATATCTGATTT+TGG + Chr8:36792936-36792955 MsG0880044167.01.T01:CDS 30.0%
! CACACCAAAATCAGATATTT+TGG - Chr8:36792943-36792962 None:intergenic 30.0%
! CACCAAAATCAGATATTTTG+GGG - Chr8:36792941-36792960 None:intergenic 30.0%
!! CAAAATATCTGATTTTGGTG+TGG + Chr8:36792941-36792960 MsG0880044167.01.T01:CDS 30.0%
TACAAAACAAGAAACCGAAG+TGG + Chr8:36792974-36792993 MsG0880044167.01.T01:CDS 35.0%
TCTTCACAAATATCAAGGCT+CGG + Chr8:36792861-36792880 MsG0880044167.01.T01:CDS 35.0%
!! TACTAGCCTTCAAATCTGTG+TGG - Chr8:36792893-36792912 None:intergenic 40.0%
!! TGGGGTTCACATTTTGATCA+AGG - Chr8:36792923-36792942 None:intergenic 40.0%
!!! AACCGAAGTGGTTTTTTGTG+TGG + Chr8:36792986-36793005 MsG0880044167.01.T01:CDS 40.0%
!!! ACCGAAGTGGTTTTTTGTGT+GGG + Chr8:36792987-36793006 MsG0880044167.01.T01:CDS 40.0%
GCCCACACAAAAAACCACTT+CGG - Chr8:36792991-36793010 None:intergenic 45.0%
! TGTGGGCTACTCAGAAAACT+CGG + Chr8:36793004-36793023 MsG0880044167.01.T01:CDS 45.0%
Chromosome Type Strat End Strand Name
Chr8 gene 36792810 36793031 36792810 ID=MsG0880044167.01;Name=MsG0880044167.01
Chr8 mRNA 36792810 36793031 36792810 ID=MsG0880044167.01.T01;Parent=MsG0880044167.01;Name=MsG0880044167.01.T01;_AED=0.51;_eAED=0.69;_QI=0|-1|0|1|-1|0|1|0|73
Chr8 exon 36792810 36793031 36792810 ID=MsG0880044167.01.T01:exon:16008;Parent=MsG0880044167.01.T01
Chr8 CDS 36792810 36793031 36792810 ID=MsG0880044167.01.T01:cds;Parent=MsG0880044167.01.T01
Gene Sequence

>MsG0880044167.01.T01

TTGGAACAAACGTTTAAGCATATTATAAGGAATTTCTCAAGGTTTACTATATCTTCACAAATATCAAGGCTCGGAATTATCCACACAGATTTGAAGGCTAGTAATATTTTCCTTGATCAAAATGTGAACCCCAAAATATCTGATTTTGGTGTGGCAAGAATGTTTACAAAACAAGAAACCGAAGTGGTTTTTTGTGTGGGCTACTCAGAAAACTCGGAATGA
Protein sequence

>MsG0880044167.01.T01

LEQTFKHIIRNFSRFTISSQISRLGIIHTDLKASNIFLDQNVNPKISDFGVARMFTKQETEVVFCVGYSENSE*