AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880044190.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044190.01.T01 MTR_8g051580 94.475 181 10 0 1 181 1 181 3.21e-124 347
MsG0880044190.01.T01 MTR_1g047550 59.429 175 71 0 1 175 1 175 1.18e-72 217
MsG0880044190.01.T01 MTR_8g046350 63.314 169 56 2 1 169 1 163 3.12e-69 207
MsG0880044190.01.T01 MTR_1g063160 56.000 175 77 0 1 175 1 175 1.91e-68 206
MsG0880044190.01.T01 MTR_1g054265 58.333 168 70 0 1 168 1 168 9.29e-67 201
MsG0880044190.01.T01 MTR_8g079502 57.831 166 70 0 1 166 1 166 8.32e-66 199
MsG0880044190.01.T01 MTR_4g131030 52.941 187 71 1 1 170 1 187 9.23e-65 198
MsG0880044190.01.T01 MTR_4g094632 39.881 168 81 5 1 164 1 152 6.24e-29 105
MsG0880044190.01.T01 MTR_3g080940 43.902 123 59 2 1 117 8 126 4.58e-25 96.7
MsG0880044190.01.T01 MTR_1g106070 46.535 101 52 1 2 100 9 109 1.21e-24 95.1
MsG0880044190.01.T01 MTR_3g052870 38.621 145 71 3 2 142 9 139 7.41e-24 94.0
MsG0880044190.01.T01 MTR_2g105290 43.269 104 57 1 1 104 11 112 8.50e-24 92.4
MsG0880044190.01.T01 MTR_5g045560 43.925 107 58 1 1 107 8 112 1.40e-23 93.6
MsG0880044190.01.T01 MTR_8g086290 40.777 103 59 1 2 104 12 112 2.38e-23 91.7
MsG0880044190.01.T01 MTR_1g105920 46.535 101 52 1 2 100 9 109 4.57e-23 92.0
MsG0880044190.01.T01 MTR_3g052920 57.971 69 29 0 2 70 9 77 4.78e-23 92.0
MsG0880044190.01.T01 MTR_1g108580 37.580 157 80 3 2 143 9 162 7.50e-23 91.3
MsG0880044190.01.T01 MTR_1g105910 40.361 166 66 7 2 166 9 142 3.34e-22 90.1
MsG0880044190.01.T01 MTR_4g094638 42.056 107 59 1 1 104 1 107 3.43e-22 88.6
MsG0880044190.01.T01 MTR_2g030740 57.971 69 29 0 2 70 9 77 5.54e-22 89.4
MsG0880044190.01.T01 MTR_5g053390 35.897 156 84 3 2 143 9 162 1.11e-21 88.6
MsG0880044190.01.T01 MTR_3g030770 56.522 69 30 0 2 70 9 77 1.24e-21 88.2
MsG0880044190.01.T01 MTR_8g043650 56.522 69 30 0 2 70 9 77 1.44e-21 88.2
MsG0880044190.01.T01 MTR_1g108510 56.522 69 30 0 2 70 9 77 1.45e-21 88.2
MsG0880044190.01.T01 MTR_1g012570 55.072 69 31 0 2 70 9 77 3.01e-21 87.4
MsG0880044190.01.T01 MTR_1g077360 50.633 79 39 0 2 80 9 87 3.56e-21 87.4
MsG0880044190.01.T01 MTR_2g093190 37.580 157 80 3 2 143 9 162 4.63e-21 86.7
MsG0880044190.01.T01 MTR_5g055100 45.918 98 40 1 2 99 9 93 5.42e-21 86.7
MsG0880044190.01.T01 MTR_0121s0100 42.017 119 64 2 2 120 9 122 5.89e-21 84.0
MsG0880044190.01.T01 MTR_1g075600 56.522 69 30 0 2 70 9 77 1.08e-20 85.9
MsG0880044190.01.T01 MTR_7g028448 37.600 125 76 2 17 140 27 150 1.12e-20 84.3
MsG0880044190.01.T01 MTR_4g036915 37.600 125 76 2 17 140 27 150 1.12e-20 84.3
MsG0880044190.01.T01 MTR_2g085280 34.146 164 92 4 2 151 9 170 1.75e-20 85.5
MsG0880044190.01.T01 MTR_2g085250 34.146 164 92 4 2 151 9 170 1.92e-20 85.1
MsG0880044190.01.T01 MTR_3g030780 50.725 69 34 0 2 70 9 77 6.21e-20 81.3
MsG0880044190.01.T01 MTR_0121s0080 53.521 71 33 0 2 72 9 79 1.14e-19 83.2
MsG0880044190.01.T01 MTR_1g105905 64.151 53 19 0 18 70 8 60 1.48e-18 80.1
MsG0880044190.01.T01 MTR_7g062350 58.333 60 25 0 13 72 32 91 1.96e-18 80.1
MsG0880044190.01.T01 MTR_2g017865 35.115 131 81 2 1 130 16 143 4.02e-18 79.7
MsG0880044190.01.T01 MTR_2g009890 52.174 69 33 0 1 69 1 69 8.13e-18 79.0
MsG0880044190.01.T01 MTR_5g066180 46.377 69 37 0 1 69 1 69 1.14e-17 77.8
MsG0880044190.01.T01 MTR_4g127140 48.101 79 41 0 1 79 11 89 1.24e-17 76.6
MsG0880044190.01.T01 MTR_1g053070 45.570 79 43 0 1 79 1 79 1.31e-17 77.8
MsG0880044190.01.T01 MTR_5g031000 50.725 69 34 0 1 69 1 69 1.70e-17 77.4
MsG0880044190.01.T01 MTR_5g031000 50.725 69 34 0 1 69 1 69 1.95e-17 77.0
MsG0880044190.01.T01 MTR_4g084740 34.225 187 105 8 1 175 1 181 2.20e-17 78.6
MsG0880044190.01.T01 MTR_3g113030 37.778 135 77 3 1 134 1 129 3.29e-17 76.6
MsG0880044190.01.T01 MTR_0003s0590 50.725 69 34 0 1 69 1 69 3.55e-17 77.0
MsG0880044190.01.T01 MTR_1g101970 42.667 75 43 0 1 75 1 75 3.85e-17 75.5
MsG0880044190.01.T01 MTR_5g046790 46.479 71 35 1 1 71 1 68 6.12e-17 75.5
MsG0880044190.01.T01 MTR_3g067875 62.500 48 18 0 18 65 8 55 7.75e-17 71.6
MsG0880044190.01.T01 MTR_5g066960 56.667 60 26 0 1 60 1 60 8.28e-17 71.2
MsG0880044190.01.T01 MTR_4g093970 37.857 140 71 3 1 132 27 158 1.09e-16 75.5
MsG0880044190.01.T01 MTR_8g033270 44.000 75 42 0 1 75 1 75 1.10e-16 75.5
MsG0880044190.01.T01 MTR_8g087860 35.714 112 69 1 1 112 17 125 1.14e-16 75.5
MsG0880044190.01.T01 MTR_8g033220 36.538 104 64 2 1 104 1 102 1.27e-16 74.7
MsG0880044190.01.T01 MTR_7g075870 46.377 69 37 0 1 69 1 69 1.45e-16 74.3
MsG0880044190.01.T01 MTR_8g033220 36.538 104 64 2 1 104 1 102 1.83e-16 74.7
MsG0880044190.01.T01 MTR_3g452380 49.275 69 35 0 1 69 16 84 2.25e-16 74.7
MsG0880044190.01.T01 MTR_1g108500 56.667 60 26 0 18 77 113 172 2.42e-16 75.5
MsG0880044190.01.T01 MTR_8g066260 46.479 71 35 1 1 71 1 68 5.00e-16 73.6
MsG0880044190.01.T01 MTR_3g005530 44.928 69 38 0 1 69 1 69 5.33e-16 73.2
MsG0880044190.01.T01 MTR_2g461710 50.877 57 28 0 1 57 1 57 7.94e-16 68.6
MsG0880044190.01.T01 MTR_4g109830 46.479 71 35 1 1 71 1 68 8.78e-16 72.8
MsG0880044190.01.T01 MTR_5g021270 48.387 62 32 0 1 62 1 62 1.01e-15 72.8
MsG0880044190.01.T01 MTR_5g021270 48.387 62 32 0 1 62 1 62 1.01e-15 72.8
MsG0880044190.01.T01 MTR_7g016600 50.820 61 30 0 1 61 1 61 1.07e-15 72.8
MsG0880044190.01.T01 MTR_4g102530 46.377 69 37 0 1 69 1 69 1.25e-15 72.0
MsG0880044190.01.T01 MTR_7g075870 47.143 70 36 1 1 69 1 70 2.00e-15 71.6
MsG0880044190.01.T01 MTR_5g046870 52.632 57 27 0 1 57 1 57 2.42e-15 68.9
MsG0880044190.01.T01 MTR_6g464720 31.655 139 85 4 1 134 1 134 2.51e-15 72.0
MsG0880044190.01.T01 MTR_8g097090 35.119 168 92 6 1 157 1 162 3.20e-15 71.2
MsG0880044190.01.T01 MTR_7g016630 41.429 70 40 1 1 69 1 70 3.49e-15 71.6
MsG0880044190.01.T01 MTR_3g084980 52.459 61 29 0 1 61 1 61 5.04e-15 70.9
MsG0880044190.01.T01 MTR_6g015975 50.794 63 30 1 1 62 1 63 7.25e-15 70.5
MsG0880044190.01.T01 MTR_5g032520 44.615 65 36 0 1 65 1 65 7.39e-15 70.1
MsG0880044190.01.T01 MTR_4g036050 54.545 55 25 0 1 55 1 55 8.60e-15 69.3
MsG0880044190.01.T01 MTR_4g093030 50.794 63 31 0 1 63 1 63 8.70e-15 68.6
MsG0880044190.01.T01 MTR_4g036050 54.545 55 25 0 1 55 1 55 8.78e-15 69.3
MsG0880044190.01.T01 MTR_4g036050 54.545 55 25 0 1 55 1 55 8.86e-15 68.9
MsG0880044190.01.T01 MTR_4g036050 54.545 55 25 0 1 55 1 55 9.01e-15 69.7
MsG0880044190.01.T01 MTR_5g032150 44.615 65 36 0 1 65 1 65 9.99e-15 69.7
MsG0880044190.01.T01 MTR_4g109810 46.774 62 33 0 1 62 1 62 1.84e-14 69.3
MsG0880044190.01.T01 MTR_3g067910 50.943 53 26 0 18 70 6 58 1.95e-14 66.2
MsG0880044190.01.T01 MTR_1g038300 43.662 71 38 1 1 69 1 71 2.01e-14 68.9
MsG0880044190.01.T01 MTR_7g075850 50.820 61 30 0 1 61 1 61 2.24e-14 69.3
MsG0880044190.01.T01 MTR_3g102570 35.526 152 77 9 1 151 1 132 5.88e-14 68.9
MsG0880044190.01.T01 MTR_1g029670 41.935 62 36 0 1 62 1 62 1.81e-13 65.5
MsG0880044190.01.T01 MTR_3g088615 41.935 62 36 0 1 62 1 62 2.54e-13 65.1
MsG0880044190.01.T01 MTR_1g041615 66.667 42 14 0 17 58 21 62 5.30e-13 63.2
MsG0880044190.01.T01 MTR_5g041650 29.762 168 87 4 1 140 38 202 5.75e-13 66.2
MsG0880044190.01.T01 MTR_3g067870 56.250 48 21 0 18 65 92 139 7.21e-13 63.5
MsG0880044190.01.T01 MTR_3g437790 34.459 148 58 5 19 140 30 164 1.57e-12 63.2
MsG0880044190.01.T01 MTR_4g108720 28.743 167 88 4 1 139 1 164 5.37e-12 63.5
MsG0880044190.01.T01 MTR_3g109930 43.860 57 32 0 17 73 17 73 3.35e-11 59.3
MsG0880044190.01.T01 MTR_8g022970 48.148 54 28 0 20 73 36 89 3.92e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880044190.01.T01 AT2G34440 42.197 173 88 4 1 162 1 172 5.06e-33 116
MsG0880044190.01.T01 AT3G66656 40.341 176 88 4 1 160 1 175 1.32e-30 110
MsG0880044190.01.T01 AT2G24840 37.805 164 87 4 1 150 62 224 3.02e-30 111
MsG0880044190.01.T01 AT5G60440 43.558 163 65 6 2 143 7 163 2.10e-27 105
MsG0880044190.01.T01 AT1G01530 46.018 113 58 3 1 112 6 116 8.92e-23 91.7
MsG0880044190.01.T01 AT1G47760 55.882 68 30 0 1 68 1 68 3.68e-22 88.6
MsG0880044190.01.T01 AT4G36590 57.353 68 29 0 2 69 7 74 1.20e-20 86.3
MsG0880044190.01.T01 AT3G57230 47.674 86 38 1 1 86 1 79 1.37e-20 83.6
MsG0880044190.01.T01 AT3G57230 47.674 86 38 1 1 86 1 79 3.70e-20 84.7
MsG0880044190.01.T01 AT3G57230 47.674 86 38 1 1 86 1 79 3.70e-20 84.7
MsG0880044190.01.T01 AT1G65360 53.623 69 32 0 1 69 6 74 8.38e-20 83.6
MsG0880044190.01.T01 AT2G22630 53.623 69 32 0 1 69 1 69 2.73e-19 82.0
MsG0880044190.01.T01 AT2G22630 53.623 69 32 0 1 69 1 69 2.73e-19 82.0
MsG0880044190.01.T01 AT4G37940 53.623 69 32 0 1 69 1 69 4.64e-19 81.6
MsG0880044190.01.T01 AT4G37940 53.623 69 32 0 1 69 1 69 6.45e-19 80.9
MsG0880044190.01.T01 AT3G61120 44.872 78 43 0 1 78 1 78 9.92e-19 80.9
MsG0880044190.01.T01 AT4G37940 53.623 69 32 0 1 69 1 69 1.28e-18 79.3
MsG0880044190.01.T01 AT1G29962 48.611 72 37 0 2 73 8 79 1.47e-18 79.3
MsG0880044190.01.T01 AT3G04100 36.691 139 65 3 2 135 14 134 3.00e-18 79.0
MsG0880044190.01.T01 AT1G28460 47.222 72 38 0 2 73 8 79 5.05e-18 77.8
MsG0880044190.01.T01 AT1G71692 42.553 94 50 2 1 93 1 91 1.93e-17 77.0
MsG0880044190.01.T01 AT2G45660 33.036 112 72 1 1 112 1 109 2.14e-17 75.5
MsG0880044190.01.T01 AT2G03710 35.088 171 89 6 1 158 1 162 2.37e-17 76.3
MsG0880044190.01.T01 AT4G24540 35.088 114 70 1 1 110 1 114 5.43e-17 75.9
MsG0880044190.01.T01 AT5G13790 40.741 108 53 2 1 106 1 99 5.88e-17 76.6
MsG0880044190.01.T01 AT5G15800 34.320 169 93 4 1 158 1 162 5.92e-17 76.3
MsG0880044190.01.T01 AT2G45650 46.377 69 37 0 1 69 1 69 6.07e-17 76.3
MsG0880044190.01.T01 AT5G15800 34.320 169 93 4 1 158 1 162 6.34e-17 76.3
MsG0880044190.01.T01 AT2G45660 45.714 70 38 0 1 70 1 70 6.90e-17 75.5
MsG0880044190.01.T01 AT3G57390 47.826 69 36 0 1 69 1 69 8.76e-17 75.5
MsG0880044190.01.T01 AT4G22950 47.826 69 36 0 1 69 1 69 9.48e-17 74.3
MsG0880044190.01.T01 AT1G72350 53.623 69 30 1 2 70 43 109 9.65e-17 75.1
MsG0880044190.01.T01 AT1G69120 49.296 71 33 1 1 71 1 68 1.06e-16 75.5
MsG0880044190.01.T01 AT5G13790 40.367 109 55 3 1 106 1 102 1.08e-16 75.9
MsG0880044190.01.T01 AT4G09960 33.929 112 71 1 1 112 2 110 1.38e-16 75.1
MsG0880044190.01.T01 AT4G09960 33.929 112 71 1 1 112 1 109 1.42e-16 74.7
MsG0880044190.01.T01 AT4G09960 33.929 112 71 1 1 112 1 109 1.45e-16 74.7
MsG0880044190.01.T01 AT2G03710 35.088 171 89 6 1 158 1 162 1.58e-16 75.1
MsG0880044190.01.T01 AT2G03710 35.088 171 89 6 1 158 1 162 1.69e-16 75.1
MsG0880044190.01.T01 AT3G57390 47.826 69 36 0 1 69 1 69 1.74e-16 75.1
MsG0880044190.01.T01 AT4G09960 33.929 112 71 1 1 112 11 119 1.78e-16 74.7
MsG0880044190.01.T01 AT1G26310 30.667 150 102 1 1 150 1 148 1.79e-16 75.1
MsG0880044190.01.T01 AT4G09960 33.929 112 71 1 1 112 27 135 2.11e-16 74.7
MsG0880044190.01.T01 AT3G58780 31.169 154 101 2 1 154 16 164 2.47e-16 74.7
MsG0880044190.01.T01 AT2G22540 49.231 65 33 0 1 65 1 65 2.52e-16 74.3
MsG0880044190.01.T01 AT2G22540 49.231 65 33 0 1 65 1 65 2.52e-16 74.3
MsG0880044190.01.T01 AT3G58780 31.169 154 101 2 1 154 22 170 2.77e-16 74.7
MsG0880044190.01.T01 AT1G69120 49.296 71 33 1 1 71 1 68 2.84e-16 74.7
MsG0880044190.01.T01 AT1G24260 35.503 169 92 5 1 157 1 164 3.07e-16 74.3
MsG0880044190.01.T01 AT4G09960 33.929 112 71 1 1 112 96 204 3.30e-16 75.1
MsG0880044190.01.T01 AT2G14210 54.098 61 28 0 1 61 1 61 3.38e-16 73.9
MsG0880044190.01.T01 AT5G60910 46.479 71 35 1 1 71 1 68 3.96e-16 73.9
MsG0880044190.01.T01 AT3G02310 34.857 175 96 5 1 164 1 168 4.03e-16 73.2
MsG0880044190.01.T01 AT1G22130 50.704 71 34 1 1 70 1 71 4.08e-16 75.1
MsG0880044190.01.T01 AT3G58780 34.821 112 70 1 1 112 16 124 4.20e-16 74.3
MsG0880044190.01.T01 AT2G14210 54.098 61 28 0 1 61 1 61 4.67e-16 73.6
MsG0880044190.01.T01 AT3G30260 54.386 57 26 0 1 57 1 57 5.76e-16 73.6
MsG0880044190.01.T01 AT4G22950 47.826 69 36 0 1 69 1 69 6.58e-16 72.8
MsG0880044190.01.T01 AT4G22950 47.826 69 36 0 1 69 1 69 6.58e-16 72.8
MsG0880044190.01.T01 AT3G54340 50.000 62 31 0 1 62 1 62 1.07e-15 72.8
MsG0880044190.01.T01 AT3G02310 34.857 175 96 6 1 164 1 168 1.19e-15 72.8
MsG0880044190.01.T01 AT4G11880 35.897 117 50 2 1 116 1 93 1.28e-15 71.2
MsG0880044190.01.T01 AT4G11880 35.897 117 50 2 1 116 1 93 1.28e-15 71.2
MsG0880044190.01.T01 AT1G77980 48.101 79 36 2 1 78 1 75 1.33e-15 73.6
MsG0880044190.01.T01 AT4G18960 34.615 130 81 2 2 130 18 144 1.42e-15 72.8
MsG0880044190.01.T01 AT1G24260 35.882 170 89 7 1 157 1 163 1.47e-15 72.4
MsG0880044190.01.T01 AT2G42830 46.377 69 37 0 1 69 16 84 1.57e-15 72.4
MsG0880044190.01.T01 AT2G42830 46.377 69 37 0 1 69 16 84 1.68e-15 72.4
MsG0880044190.01.T01 AT1G46408 50.633 79 33 3 1 73 1 79 1.96e-15 72.4
MsG0880044190.01.T01 AT5G65070 35.115 131 79 3 1 127 1 129 2.14e-15 70.1
MsG0880044190.01.T01 AT5G51860 43.662 71 40 0 1 71 1 71 2.95e-15 70.9
MsG0880044190.01.T01 AT5G51860 43.662 71 40 0 1 71 1 71 3.19e-15 70.9
MsG0880044190.01.T01 AT4G11880 35.897 117 50 2 1 116 1 93 4.45e-15 70.9
MsG0880044190.01.T01 AT4G11880 35.897 117 50 2 1 116 1 93 4.45e-15 70.9
MsG0880044190.01.T01 AT5G10140 52.632 57 27 0 1 57 1 57 5.15e-15 69.3
MsG0880044190.01.T01 AT5G65070 35.115 131 79 3 1 127 1 129 6.21e-15 70.1
MsG0880044190.01.T01 AT5G10140 52.632 57 27 0 1 57 1 57 6.55e-15 69.7
MsG0880044190.01.T01 AT5G65070 43.590 78 41 2 1 76 1 77 7.34e-15 70.5
MsG0880044190.01.T01 AT5G51870 42.029 69 40 0 1 69 1 69 7.43e-15 69.7
MsG0880044190.01.T01 AT1G24260 41.935 93 49 1 1 93 1 88 8.28e-15 70.5
MsG0880044190.01.T01 AT5G10140 52.632 57 27 0 1 57 1 57 8.61e-15 69.3
MsG0880044190.01.T01 AT5G10140 51.724 58 28 0 1 58 1 58 1.07e-14 68.9
MsG0880044190.01.T01 AT5G51870 42.029 69 40 0 1 69 1 69 1.41e-14 68.6
MsG0880044190.01.T01 AT3G58780 39.535 86 39 1 1 73 16 101 1.43e-14 69.7
MsG0880044190.01.T01 AT5G51870 42.029 69 40 0 1 69 1 69 1.52e-14 69.3
MsG0880044190.01.T01 AT1G28450 43.056 72 41 0 2 73 8 79 1.58e-14 68.6
MsG0880044190.01.T01 AT5G51870 42.029 69 40 0 1 69 24 92 2.09e-14 68.6
MsG0880044190.01.T01 AT2G22540 50.877 57 28 0 1 57 1 57 2.09e-14 69.3
MsG0880044190.01.T01 AT5G51870 42.029 69 40 0 1 69 11 79 2.09e-14 68.9
MsG0880044190.01.T01 AT5G20240 47.619 63 33 0 1 63 1 63 2.30e-14 67.4
MsG0880044190.01.T01 AT3G58780 50.820 61 30 0 1 61 16 76 2.39e-14 69.7
MsG0880044190.01.T01 AT1G18750 28.977 176 84 4 1 138 1 173 2.58e-14 70.1
MsG0880044190.01.T01 AT1G18750 28.977 176 84 4 1 138 1 173 2.86e-14 70.1
MsG0880044190.01.T01 AT5G65070 42.857 70 39 1 1 69 1 70 3.93e-14 68.6
MsG0880044190.01.T01 AT5G20240 47.619 63 33 0 1 63 1 63 4.03e-14 67.8
MsG0880044190.01.T01 AT4G37435 28.249 177 94 4 1 150 1 171 4.83e-14 67.4
MsG0880044190.01.T01 AT5G49490 41.176 102 45 2 3 100 46 136 6.02e-14 68.6
MsG0880044190.01.T01 AT5G23260 34.731 167 91 7 1 157 1 159 7.88e-14 67.8
MsG0880044190.01.T01 AT5G65070 48.276 58 30 0 1 58 1 58 8.54e-14 67.0
MsG0880044190.01.T01 AT5G23260 56.140 57 25 0 1 57 17 73 8.68e-14 67.8
MsG0880044190.01.T01 AT5G23260 56.140 57 25 0 1 57 17 73 9.23e-14 67.8
MsG0880044190.01.T01 AT5G65050 52.727 55 26 0 1 55 1 55 1.00e-13 66.2
MsG0880044190.01.T01 AT5G23260 36.129 155 85 6 1 149 1 147 1.04e-13 67.4
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 1.29e-13 65.5
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 1.29e-13 65.5
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 1.29e-13 65.5
MsG0880044190.01.T01 AT5G65080 44.286 70 38 1 1 69 8 77 1.79e-13 65.9
MsG0880044190.01.T01 AT5G65060 54.545 55 25 0 1 55 1 55 1.86e-13 65.9
MsG0880044190.01.T01 AT1G17310 57.407 54 21 1 17 70 63 114 2.31e-13 66.2
MsG0880044190.01.T01 AT5G65060 54.545 55 25 0 1 55 1 55 2.36e-13 65.5
MsG0880044190.01.T01 AT1G17310 57.407 54 21 1 17 70 74 125 2.68e-13 66.2
MsG0880044190.01.T01 AT5G65060 54.545 55 25 0 1 55 1 55 2.68e-13 65.5
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 2.70e-13 64.7
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 2.70e-13 64.7
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 2.70e-13 64.7
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 2.70e-13 64.7
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 2.70e-13 64.7
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 2.81e-13 65.9
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 2.81e-13 65.9
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 2.81e-13 65.9
MsG0880044190.01.T01 AT5G62165 30.693 101 59 1 1 90 1 101 2.83e-13 63.5
MsG0880044190.01.T01 AT1G77950 40.845 71 41 1 1 70 1 71 3.28e-13 66.2
MsG0880044190.01.T01 AT1G77950 40.845 71 41 1 1 70 1 71 3.28e-13 66.2
MsG0880044190.01.T01 AT1G77950 40.845 71 41 1 1 70 1 71 3.28e-13 66.2
MsG0880044190.01.T01 AT1G77950 40.845 71 41 1 1 70 1 71 3.28e-13 66.2
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 3.32e-13 65.1
MsG0880044190.01.T01 AT5G62165 39.130 69 42 0 1 69 1 69 3.32e-13 65.1
MsG0880044190.01.T01 AT5G65050 52.727 55 26 0 1 55 1 55 3.35e-13 65.1
MsG0880044190.01.T01 AT5G65050 52.727 55 26 0 1 55 1 55 3.93e-13 64.7
MsG0880044190.01.T01 AT5G65050 52.727 55 26 0 1 55 1 55 4.06e-13 64.7
MsG0880044190.01.T01 AT1G18750 43.662 71 38 1 1 69 1 71 5.36e-13 66.6
MsG0880044190.01.T01 AT5G65080 48.214 56 29 0 1 56 8 63 9.18e-13 64.3
MsG0880044190.01.T01 AT1G60920 43.421 76 38 2 3 73 5 80 1.08e-12 63.9
MsG0880044190.01.T01 AT1G31140 30.476 105 68 2 1 100 1 105 2.89e-12 63.2
MsG0880044190.01.T01 AT5G49420 45.333 75 37 1 3 73 8 82 3.13e-12 63.9
MsG0880044190.01.T01 AT5G38620 45.946 74 36 1 3 72 6 79 4.81e-12 63.5
MsG0880044190.01.T01 AT2G26320 45.902 61 33 0 1 61 17 77 9.01e-12 59.3
MsG0880044190.01.T01 AT1G69540 41.429 70 40 1 1 69 1 70 1.57e-11 62.0
MsG0880044190.01.T01 AT1G69540 41.429 70 40 1 1 69 1 70 2.31e-11 61.6
MsG0880044190.01.T01 AT5G04640 41.333 75 40 1 3 73 5 79 2.91e-11 61.2
MsG0880044190.01.T01 AT2G03060 33.083 133 59 4 1 106 1 130 3.15e-11 61.2
MsG0880044190.01.T01 AT2G03060 33.083 133 59 4 1 106 1 130 3.79e-11 61.2
MsG0880044190.01.T01 AT2G03060 33.083 133 59 4 1 106 1 130 3.79e-11 61.2
MsG0880044190.01.T01 AT2G03060 33.083 133 59 4 1 106 1 130 3.79e-11 61.2

Find 43 sgRNAs with CRISPR-Local

Find 44 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGCTCTCCTTCAAGAAATT+TGG 0.179978 8:+37324027 None:intergenic
GGAATAAGCCTTACTCTTTC+GGG 0.222535 8:-37324075 MsG0880044190.01.T01:CDS
GGGAATAAGCCTTACTCTTT+CGG 0.264231 8:-37324076 MsG0880044190.01.T01:CDS
CAGTTGGTTTGTATTCTTCT+AGG 0.270957 8:+37323876 None:intergenic
TGATTCAGATCCTCTCTGTT+TGG 0.338080 8:+37323965 None:intergenic
GCTATTGTTGTGTTCTCCCC+TGG 0.368488 8:-37324097 MsG0880044190.01.T01:CDS
AGGATTTGAAAGATTCATAT+CGG 0.405934 8:-37323838 MsG0880044190.01.T01:CDS
ACATTCTCTAAGCGTCGAAC+AGG 0.429261 8:-37324169 MsG0880044190.01.T01:CDS
CTATTGTTGTGTTCTCCCCT+GGG 0.431123 8:-37324096 MsG0880044190.01.T01:CDS
GTTACTTCTTGCAGAGAAAC+CGG 0.436314 8:-37323759 MsG0880044190.01.T01:CDS
ATATCGGAAATTGAAGGAAA+TGG 0.440694 8:-37323822 MsG0880044190.01.T01:CDS
GTTGCATCCAAATTTCTTGA+AGG 0.449324 8:-37324034 MsG0880044190.01.T01:CDS
AATGTAACCTGCCTTATGAT+AGG 0.459002 8:+37324187 None:intergenic
AACAAAGTCGCAAGAAAGAA+AGG 0.460568 8:-37323722 MsG0880044190.01.T01:CDS
ATGAACTTGCCATCTTGTGC+GGG 0.468340 8:-37324129 MsG0880044190.01.T01:CDS
CTTGGGTGCCCGAAAGAGTA+AGG 0.491836 8:+37324067 None:intergenic
TCAAGTTGAGTGAGTTCAGT+TGG 0.504549 8:+37323860 None:intergenic
AGGAGGCTGAAAATGAAGCT+AGG 0.515324 8:-37323913 MsG0880044190.01.T01:CDS
AGCTTCCTATGCCATCATCT+AGG 0.527794 8:+37324002 None:intergenic
AAAGAGTAAGGCTTATTCCC+AGG 0.528202 8:+37324079 None:intergenic
AATGAACTTGCCATCTTGTG+CGG 0.538350 8:-37324130 MsG0880044190.01.T01:CDS
AACTGAACTCACTCAACTTG+AGG 0.538837 8:-37323858 MsG0880044190.01.T01:CDS
ATGTAACCTGCCTTATGATA+GGG 0.543825 8:+37324188 None:intergenic
GGGTGAGAGACCCTATCATA+AGG 0.546640 8:-37324198 MsG0880044190.01.T01:CDS
GATGCAACATCATCAACACT+TGG 0.549337 8:+37324049 None:intergenic
AATTTCTGCCCCGCACAAGA+TGG 0.555860 8:+37324120 None:intergenic
CTTGCAGAGAAACCGGTGGT+TGG 0.563786 8:-37323752 MsG0880044190.01.T01:CDS
GGAGAGCTCAACCTAGATGA+TGG 0.566220 8:-37324013 MsG0880044190.01.T01:CDS
GGAGGCTGAAAATGAAGCTA+GGG 0.567281 8:-37323912 MsG0880044190.01.T01:CDS
GTCGCAAAATTGCGATTGCG+AGG 0.570735 8:-37324219 MsG0880044190.01.T01:CDS
GAGAGACCCTATCATAAGGC+AGG 0.574297 8:-37324194 MsG0880044190.01.T01:CDS
AAGAGTAAGGCTTATTCCCA+GGG 0.598555 8:+37324080 None:intergenic
AGATGTGCTAGCTCAACTAA+AGG 0.611567 8:-37323933 MsG0880044190.01.T01:CDS
AGATTCATATCGGAAATTGA+AGG 0.637344 8:-37323828 MsG0880044190.01.T01:CDS
TCGCAAAATTGCGATTGCGA+GGG 0.641127 8:-37324218 MsG0880044190.01.T01:CDS
TGTGCTAGCTCAACTAAAGG+AGG 0.641632 8:-37323930 MsG0880044190.01.T01:CDS
TCGAACAGGATTATTCAAGA+AGG 0.647981 8:-37324155 MsG0880044190.01.T01:CDS
CTCAACCTAGATGATGGCAT+AGG 0.656307 8:-37324007 MsG0880044190.01.T01:CDS
ATGCAACATCATCAACACTT+GGG 0.663273 8:+37324050 None:intergenic
TGAACTTGCCATCTTGTGCG+GGG 0.674850 8:-37324128 MsG0880044190.01.T01:CDS
TTCTGAAGTTCCAAACAGAG+AGG 0.695196 8:-37323975 MsG0880044190.01.T01:CDS
ACTTCTTGCAGAGAAACCGG+TGG 0.709944 8:-37323756 MsG0880044190.01.T01:CDS
AGAGTAAGGCTTATTCCCAG+GGG 0.760036 8:+37324081 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AGGATTTGAAAGATTCATAT+CGG - Chr8:37324091-37324110 MsG0880044190.01.T01:CDS 25.0%
AGATTCATATCGGAAATTGA+AGG - Chr8:37324101-37324120 MsG0880044190.01.T01:CDS 30.0%
ATATCGGAAATTGAAGGAAA+TGG - Chr8:37324107-37324126 MsG0880044190.01.T01:CDS 30.0%
AACAAAGTCGCAAGAAAGAA+AGG - Chr8:37324207-37324226 MsG0880044190.01.T01:CDS 35.0%
AATGTAACCTGCCTTATGAT+AGG + Chr8:37323745-37323764 None:intergenic 35.0%
ATGCAACATCATCAACACTT+GGG + Chr8:37323882-37323901 None:intergenic 35.0%
ATGTAACCTGCCTTATGATA+GGG + Chr8:37323744-37323763 None:intergenic 35.0%
GTTGCATCCAAATTTCTTGA+AGG - Chr8:37323895-37323914 MsG0880044190.01.T01:CDS 35.0%
TCGAACAGGATTATTCAAGA+AGG - Chr8:37323774-37323793 MsG0880044190.01.T01:CDS 35.0%
!! CAGTTGGTTTGTATTCTTCT+AGG + Chr8:37324056-37324075 None:intergenic 35.0%
!!! TTGTTTTTTGTTCCAACCAC+CGG + Chr8:37324192-37324211 None:intergenic 35.0%
AAAGAGTAAGGCTTATTCCC+AGG + Chr8:37323853-37323872 None:intergenic 40.0%
AACTGAACTCACTCAACTTG+AGG - Chr8:37324071-37324090 MsG0880044190.01.T01:CDS 40.0%
AAGAGTAAGGCTTATTCCCA+GGG + Chr8:37323852-37323871 None:intergenic 40.0%
AATGAACTTGCCATCTTGTG+CGG - Chr8:37323799-37323818 MsG0880044190.01.T01:CDS 40.0%
AGATGTGCTAGCTCAACTAA+AGG - Chr8:37323996-37324015 MsG0880044190.01.T01:CDS 40.0%
GAGCTCTCCTTCAAGAAATT+TGG + Chr8:37323905-37323924 None:intergenic 40.0%
GATGCAACATCATCAACACT+TGG + Chr8:37323883-37323902 None:intergenic 40.0%
GGAATAAGCCTTACTCTTTC+GGG - Chr8:37323854-37323873 MsG0880044190.01.T01:CDS 40.0%
GGGAATAAGCCTTACTCTTT+CGG - Chr8:37323853-37323872 MsG0880044190.01.T01:CDS 40.0%
GTTACTTCTTGCAGAGAAAC+CGG - Chr8:37324170-37324189 MsG0880044190.01.T01:CDS 40.0%
TGATTCAGATCCTCTCTGTT+TGG + Chr8:37323967-37323986 None:intergenic 40.0%
!! TCAAGTTGAGTGAGTTCAGT+TGG + Chr8:37324072-37324091 None:intergenic 40.0%
!! TTCTGAAGTTCCAAACAGAG+AGG - Chr8:37323954-37323973 MsG0880044190.01.T01:CDS 40.0%
AGAGTAAGGCTTATTCCCAG+GGG + Chr8:37323851-37323870 None:intergenic 45.0%
AGCTTCCTATGCCATCATCT+AGG + Chr8:37323930-37323949 None:intergenic 45.0%
AGGAGGCTGAAAATGAAGCT+AGG - Chr8:37324016-37324035 MsG0880044190.01.T01:CDS 45.0%
ATGAACTTGCCATCTTGTGC+GGG - Chr8:37323800-37323819 MsG0880044190.01.T01:CDS 45.0%
CTATTGTTGTGTTCTCCCCT+GGG - Chr8:37323833-37323852 MsG0880044190.01.T01:CDS 45.0%
GGAGGCTGAAAATGAAGCTA+GGG - Chr8:37324017-37324036 MsG0880044190.01.T01:CDS 45.0%
TCGCAAAATTGCGATTGCGA+GGG - Chr8:37323711-37323730 MsG0880044190.01.T01:CDS 45.0%
TGTGCTAGCTCAACTAAAGG+AGG - Chr8:37323999-37324018 MsG0880044190.01.T01:CDS 45.0%
! CTCAACCTAGATGATGGCAT+AGG - Chr8:37323922-37323941 MsG0880044190.01.T01:CDS 45.0%
!! ACATTCTCTAAGCGTCGAAC+AGG - Chr8:37323760-37323779 MsG0880044190.01.T01:CDS 45.0%
AATTTCTGCCCCGCACAAGA+TGG + Chr8:37323812-37323831 None:intergenic 50.0%
ACTTCTTGCAGAGAAACCGG+TGG - Chr8:37324173-37324192 MsG0880044190.01.T01:CDS 50.0%
GAGAGACCCTATCATAAGGC+AGG - Chr8:37323735-37323754 MsG0880044190.01.T01:CDS 50.0%
GCTATTGTTGTGTTCTCCCC+TGG - Chr8:37323832-37323851 MsG0880044190.01.T01:CDS 50.0%
GGAGAGCTCAACCTAGATGA+TGG - Chr8:37323916-37323935 MsG0880044190.01.T01:CDS 50.0%
GGGTGAGAGACCCTATCATA+AGG - Chr8:37323731-37323750 MsG0880044190.01.T01:CDS 50.0%
GTCGCAAAATTGCGATTGCG+AGG - Chr8:37323710-37323729 MsG0880044190.01.T01:CDS 50.0%
TGAACTTGCCATCTTGTGCG+GGG - Chr8:37323801-37323820 MsG0880044190.01.T01:CDS 50.0%
CTTGCAGAGAAACCGGTGGT+TGG - Chr8:37324177-37324196 MsG0880044190.01.T01:CDS 55.0%
CTTGGGTGCCCGAAAGAGTA+AGG + Chr8:37323865-37323884 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
Chr8 gene 37323703 37324248 37323703 ID=MsG0880044190.01;Name=MsG0880044190.01
Chr8 mRNA 37323703 37324248 37323703 ID=MsG0880044190.01.T01;Parent=MsG0880044190.01;Name=MsG0880044190.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|181
Chr8 exon 37323703 37324248 37323703 ID=MsG0880044190.01.T01:exon:2976;Parent=MsG0880044190.01.T01
Chr8 CDS 37323703 37324248 37323703 ID=MsG0880044190.01.T01:cds;Parent=MsG0880044190.01.T01
Gene Sequence

>MsG0880044190.01.T01

ATGGGTCGTCGCAAAATTGCGATTGCGAGGGTGAGAGACCCTATCATAAGGCAGGTTACATTCTCTAAGCGTCGAACAGGATTATTCAAGAAGGCAAATGAACTTGCCATCTTGTGCGGGGCAGAAATTGCTATTGTTGTGTTCTCCCCTGGGAATAAGCCTTACTCTTTCGGGCACCCAAGTGTTGATGATGTTGCATCCAAATTTCTTGAAGGAGAGCTCAACCTAGATGATGGCATAGGAAGCTCATCTTCTGAAGTTCCAAACAGAGAGGATCTGAATCAACAACTTGAAGATGTGCTAGCTCAACTAAAGGAGGCTGAAAATGAAGCTAGGGCACATGATGAGATCCTAGAAGAATACAAACCAACTGAACTCACTCAACTTGAGGATTTGAAAGATTCATATCGGAAATTGAAGGAAATGGTGAGATCACGACTTAGTGATTTAGAAACAACTGAATCTATGTTACTTCTTGCAGAGAAACCGGTGGTTGGAACAAAAAACAAAGTCGCAAGAAAGAAAGGAAAACAACCAATGCTTTAG
Protein sequence

>MsG0880044190.01.T01

MGRRKIAIARVRDPIIRQVTFSKRRTGLFKKANELAILCGAEIAIVVFSPGNKPYSFGHPSVDDVASKFLEGELNLDDGIGSSSSEVPNREDLNQQLEDVLAQLKEAENEARAHDEILEEYKPTELTQLEDLKDSYRKLKEMVRSRLSDLETTESMLLLAEKPVVGTKNKVARKKGKQPML*