Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045088.01.T01 | XP_013445993.1 | 85.714 | 448 | 34 | 4 | 1 | 448 | 1 | 418 | 0 | 775 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045088.01.T01 | Q9ZVX2 | 31.048 | 525 | 257 | 17 | 3 | 448 | 8 | 506 | 1.25E-66 | 226 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045088.01.T01 | A0A072U2K1 | 85.714 | 448 | 34 | 4 | 1 | 448 | 1 | 418 | 0.0 | 775 |
Gene ID | Type | Classification |
---|---|---|
MsG0880045088.01.T01 | TF | bHLH |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045088.01.T01 | MTR_8g064700 | 85.714 | 448 | 34 | 4 | 1 | 448 | 1 | 418 | 0.0 | 775 |
MsG0880045088.01.T01 | MTR_1g112680 | 29.259 | 540 | 261 | 16 | 3 | 451 | 9 | 518 | 1.02e-66 | 223 |
MsG0880045088.01.T01 | MTR_2g038040 | 33.333 | 174 | 113 | 2 | 262 | 434 | 51 | 222 | 5.29e-25 | 103 |
MsG0880045088.01.T01 | MTR_3g030700 | 32.701 | 211 | 123 | 5 | 247 | 450 | 176 | 374 | 1.36e-22 | 99.4 |
MsG0880045088.01.T01 | MTR_3g498695 | 32.000 | 200 | 112 | 3 | 256 | 445 | 291 | 476 | 2.94e-20 | 93.6 |
MsG0880045088.01.T01 | MTR_3g498695 | 32.000 | 200 | 111 | 4 | 256 | 445 | 291 | 475 | 8.19e-20 | 92.4 |
MsG0880045088.01.T01 | MTR_2g081040 | 29.032 | 186 | 126 | 2 | 262 | 446 | 176 | 356 | 9.70e-20 | 90.9 |
MsG0880045088.01.T01 | MTR_4g091910 | 32.258 | 186 | 101 | 4 | 258 | 443 | 42 | 202 | 6.58e-19 | 85.5 |
MsG0880045088.01.T01 | MTR_3g104100 | 29.255 | 188 | 123 | 3 | 262 | 446 | 194 | 374 | 1.26e-18 | 87.8 |
MsG0880045088.01.T01 | MTR_4g057270 | 26.943 | 193 | 127 | 2 | 254 | 445 | 140 | 319 | 1.80e-18 | 86.7 |
MsG0880045088.01.T01 | MTR_2g084280 | 27.749 | 191 | 120 | 3 | 255 | 444 | 125 | 298 | 1.82e-17 | 83.6 |
MsG0880045088.01.T01 | MTR_7g083900 | 31.720 | 186 | 121 | 3 | 262 | 445 | 285 | 466 | 1.41e-16 | 82.4 |
MsG0880045088.01.T01 | MTR_4g091990 | 29.474 | 190 | 89 | 4 | 232 | 421 | 26 | 170 | 1.99e-16 | 78.2 |
MsG0880045088.01.T01 | MTR_7g083900 | 31.551 | 187 | 121 | 4 | 262 | 445 | 285 | 467 | 8.57e-16 | 80.1 |
MsG0880045088.01.T01 | MTR_4g097950 | 29.954 | 217 | 128 | 8 | 241 | 446 | 47 | 250 | 2.66e-15 | 75.9 |
MsG0880045088.01.T01 | MTR_4g067010 | 26.901 | 171 | 104 | 3 | 258 | 426 | 142 | 293 | 2.64e-13 | 71.2 |
MsG0880045088.01.T01 | MTR_4g092700 | 27.059 | 255 | 161 | 8 | 177 | 426 | 73 | 307 | 4.84e-13 | 70.5 |
MsG0880045088.01.T01 | MTR_0246s0020 | 25.581 | 172 | 119 | 3 | 258 | 429 | 193 | 355 | 7.73e-13 | 70.1 |
MsG0880045088.01.T01 | MTR_2g010450 | 27.473 | 182 | 117 | 5 | 246 | 426 | 160 | 327 | 7.90e-13 | 70.1 |
MsG0880045088.01.T01 | MTR_0246s0020 | 26.036 | 169 | 115 | 4 | 258 | 426 | 193 | 351 | 2.08e-12 | 68.9 |
MsG0880045088.01.T01 | MTR_8g069740 | 26.250 | 240 | 127 | 10 | 197 | 426 | 64 | 263 | 2.51e-12 | 67.4 |
MsG0880045088.01.T01 | MTR_0250s0040 | 25.767 | 163 | 105 | 3 | 265 | 426 | 90 | 237 | 3.84e-12 | 67.0 |
MsG0880045088.01.T01 | MTR_5g014600 | 25.595 | 168 | 112 | 3 | 265 | 426 | 151 | 311 | 9.66e-12 | 66.6 |
MsG0880045088.01.T01 | MTR_5g014520 | 24.870 | 193 | 123 | 4 | 242 | 426 | 128 | 306 | 1.04e-11 | 66.2 |
MsG0880045088.01.T01 | MTR_5g030430 | 28.395 | 162 | 106 | 4 | 267 | 427 | 497 | 649 | 3.15e-11 | 66.2 |
MsG0880045088.01.T01 | MTR_4g066460 | 25.980 | 204 | 126 | 4 | 253 | 450 | 145 | 329 | 3.30e-11 | 64.7 |
MsG0880045088.01.T01 | MTR_8g067280 | 29.012 | 162 | 103 | 5 | 268 | 427 | 467 | 618 | 4.10e-11 | 65.9 |
MsG0880045088.01.T01 | MTR_0011s0260 | 26.829 | 164 | 102 | 4 | 265 | 426 | 185 | 332 | 4.46e-11 | 64.7 |
MsG0880045088.01.T01 | MTR_5g030770 | 28.495 | 186 | 108 | 4 | 262 | 446 | 155 | 316 | 9.03e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0880045088.01.T01 | AT2G16910 | 31.048 | 525 | 257 | 17 | 3 | 448 | 8 | 506 | 1.28e-67 | 226 |
MsG0880045088.01.T01 | AT1G10610 | 31.557 | 469 | 253 | 13 | 3 | 446 | 10 | 435 | 5.51e-66 | 219 |
MsG0880045088.01.T01 | AT1G10610 | 30.023 | 443 | 242 | 13 | 29 | 446 | 6 | 405 | 2.99e-51 | 179 |
MsG0880045088.01.T01 | AT1G10610 | 28.333 | 360 | 214 | 10 | 107 | 446 | 3 | 338 | 5.89e-34 | 130 |
MsG0880045088.01.T01 | AT5G57150 | 35.119 | 168 | 104 | 2 | 262 | 429 | 54 | 216 | 9.44e-29 | 114 |
MsG0880045088.01.T01 | AT5G57150 | 35.329 | 167 | 103 | 2 | 262 | 428 | 54 | 215 | 2.34e-28 | 112 |
MsG0880045088.01.T01 | AT5G57150 | 34.731 | 167 | 104 | 2 | 262 | 428 | 54 | 215 | 2.98e-28 | 112 |
MsG0880045088.01.T01 | AT5G57150 | 34.078 | 179 | 113 | 2 | 262 | 440 | 53 | 226 | 3.45e-28 | 112 |
MsG0880045088.01.T01 | AT5G57150 | 34.940 | 166 | 103 | 2 | 262 | 427 | 53 | 213 | 6.95e-28 | 111 |
MsG0880045088.01.T01 | AT4G29930 | 28.144 | 167 | 101 | 2 | 262 | 428 | 53 | 200 | 9.14e-20 | 88.6 |
MsG0880045088.01.T01 | AT4G29930 | 28.144 | 167 | 98 | 3 | 262 | 428 | 53 | 197 | 1.24e-19 | 88.2 |
MsG0880045088.01.T01 | AT4G29930 | 29.670 | 182 | 105 | 5 | 262 | 428 | 53 | 226 | 1.34e-19 | 89.0 |
MsG0880045088.01.T01 | AT4G29930 | 29.670 | 182 | 105 | 5 | 262 | 428 | 53 | 226 | 1.34e-19 | 89.0 |
MsG0880045088.01.T01 | AT4G29930 | 27.545 | 167 | 99 | 3 | 262 | 428 | 53 | 197 | 3.71e-19 | 86.7 |
MsG0880045088.01.T01 | AT4G29930 | 29.121 | 182 | 106 | 5 | 262 | 428 | 53 | 226 | 4.50e-19 | 87.0 |
MsG0880045088.01.T01 | AT1G12860 | 32.609 | 184 | 116 | 3 | 262 | 445 | 266 | 441 | 5.03e-18 | 86.7 |
MsG0880045088.01.T01 | AT2G28160 | 30.189 | 159 | 98 | 3 | 258 | 415 | 126 | 272 | 9.74e-17 | 81.3 |
MsG0880045088.01.T01 | AT1G12860 | 34.132 | 167 | 102 | 3 | 262 | 428 | 266 | 424 | 1.09e-16 | 82.4 |
MsG0880045088.01.T01 | AT2G28160 | 30.189 | 159 | 98 | 3 | 258 | 415 | 126 | 272 | 1.14e-16 | 81.3 |
MsG0880045088.01.T01 | AT3G26744 | 29.891 | 184 | 125 | 2 | 262 | 445 | 306 | 485 | 1.95e-16 | 82.0 |
MsG0880045088.01.T01 | AT3G26744 | 29.891 | 184 | 125 | 2 | 262 | 445 | 306 | 485 | 1.95e-16 | 82.0 |
MsG0880045088.01.T01 | AT3G26744 | 29.891 | 184 | 125 | 2 | 262 | 445 | 306 | 485 | 1.95e-16 | 82.0 |
MsG0880045088.01.T01 | AT4G29930 | 46.479 | 71 | 34 | 1 | 262 | 332 | 53 | 119 | 3.94e-15 | 73.9 |
MsG0880045088.01.T01 | AT4G21330 | 27.273 | 209 | 131 | 5 | 248 | 452 | 16 | 207 | 8.56e-15 | 73.6 |
MsG0880045088.01.T01 | AT3G26744 | 30.539 | 167 | 112 | 2 | 262 | 428 | 306 | 468 | 8.62e-15 | 77.0 |
MsG0880045088.01.T01 | AT5G46760 | 27.315 | 216 | 126 | 6 | 248 | 447 | 387 | 587 | 1.93e-13 | 73.2 |
MsG0880045088.01.T01 | AT4G16430 | 23.343 | 347 | 206 | 10 | 7 | 318 | 54 | 375 | 8.68e-13 | 70.5 |
MsG0880045088.01.T01 | AT5G41315 | 25.688 | 218 | 126 | 5 | 251 | 446 | 429 | 632 | 1.18e-12 | 70.5 |
MsG0880045088.01.T01 | AT1G63650 | 25.862 | 174 | 110 | 4 | 255 | 418 | 400 | 564 | 1.19e-12 | 70.5 |
MsG0880045088.01.T01 | AT1G63650 | 25.862 | 174 | 110 | 4 | 255 | 418 | 400 | 564 | 1.19e-12 | 70.5 |
MsG0880045088.01.T01 | AT1G63650 | 25.862 | 174 | 110 | 4 | 255 | 418 | 400 | 564 | 1.19e-12 | 70.5 |
MsG0880045088.01.T01 | AT5G41315 | 25.688 | 218 | 126 | 5 | 251 | 446 | 437 | 640 | 1.45e-12 | 70.5 |
MsG0880045088.01.T01 | AT5G41315 | 25.688 | 218 | 126 | 5 | 251 | 446 | 434 | 637 | 1.47e-12 | 70.5 |
MsG0880045088.01.T01 | AT4G37850 | 29.545 | 176 | 103 | 6 | 264 | 435 | 153 | 311 | 2.50e-12 | 68.2 |
MsG0880045088.01.T01 | AT4G37850 | 29.545 | 176 | 103 | 6 | 264 | 435 | 153 | 311 | 2.50e-12 | 68.2 |
MsG0880045088.01.T01 | AT4G17880 | 29.341 | 167 | 87 | 6 | 267 | 427 | 420 | 561 | 6.21e-12 | 68.2 |
MsG0880045088.01.T01 | AT1G32640 | 31.288 | 163 | 90 | 5 | 267 | 427 | 456 | 598 | 6.88e-12 | 68.2 |
Find 87 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATATATACCTTGGTTATATT+AGG | 0.166873 | 8:+54039100 | None:intergenic |
TTACAGTGTCTCTTTATTCT+AGG | 0.204070 | 8:-54040095 | MsG0880045088.01.T01:intron |
TATGTTGTTGTTTGGAAATA+TGG | 0.204753 | 8:-54040484 | MsG0880045088.01.T01:CDS |
TTCATGATATTTATATCTTC+TGG | 0.214432 | 8:+54039505 | None:intergenic |
TCAACAAGACCGCCAATAAT+AGG | 0.227144 | 8:+54039645 | None:intergenic |
AACTTGTGAAGAAAATAATT+TGG | 0.257116 | 8:-54040193 | MsG0880045088.01.T01:CDS |
ATCGGTGAGAGGTAGGTTTC+TGG | 0.265091 | 8:+54038690 | None:intergenic |
TTATCATTTGATTCAAACTA+TGG | 0.273196 | 8:-54039355 | MsG0880045088.01.T01:CDS |
TTCTGACTGGATGATGAAAA+AGG | 0.289400 | 8:+54040151 | None:intergenic |
TATATACCTTGGTTATATTA+GGG | 0.293400 | 8:+54039101 | None:intergenic |
GAATAAAGAGACACTGTAAA+AGG | 0.342258 | 8:+54040099 | None:intergenic |
CTTGGGATTATGTTGTTGTT+TGG | 0.348246 | 8:-54040492 | MsG0880045088.01.T01:CDS |
TAATTTGACACTCAACAAAT+AGG | 0.357124 | 8:+54036853 | None:intergenic |
ATGGAAGCAATAGATTCATT+TGG | 0.358052 | 8:-54038450 | MsG0880045088.01.T01:CDS |
TCATGATATTTATATCTTCT+GGG | 0.361224 | 8:+54039506 | None:intergenic |
ATAATTTGGCTTCCATTTGT+AGG | 0.380168 | 8:-54040179 | MsG0880045088.01.T01:CDS |
TTGGGATGTTGCTGTGGTGG+TGG | 0.394599 | 8:-54040246 | MsG0880045088.01.T01:CDS |
CAACAAGACCGCCAATAATA+GGG | 0.398653 | 8:+54039646 | None:intergenic |
GCAAACATGACCACATTTGA+TGG | 0.407005 | 8:-54038411 | MsG0880045088.01.T01:CDS |
TATAAAGCAAGAAGCAATAT+CGG | 0.417550 | 8:-54039455 | MsG0880045088.01.T01:CDS |
ACCTCATGGATAAGCCATCT+TGG | 0.422456 | 8:+54039788 | None:intergenic |
GGATGCGATTGAATATATAA+TGG | 0.425745 | 8:-54038830 | MsG0880045088.01.T01:CDS |
TCGAGTGTCTATTGCAGAAA+TGG | 0.431896 | 8:-54039250 | MsG0880045088.01.T01:CDS |
GAACCAGACCGACGTTTCAC+TGG | 0.436811 | 8:+54039271 | None:intergenic |
ATCTTATCACAGAGAGGAAT+AGG | 0.438830 | 8:-54039168 | MsG0880045088.01.T01:CDS |
TGTAGGTTCATTGAGTGGTT+GGG | 0.441252 | 8:-54040264 | MsG0880045088.01.T01:intron |
CTTTGTTGAGAGGAAAGCTT+GGG | 0.443033 | 8:-54040509 | MsG0880045088.01.T01:CDS |
AATGATAAGTGCTCAGTTGA+AGG | 0.446352 | 8:+54039370 | None:intergenic |
TCACAAGTCTTTGTTCTGAC+TGG | 0.460884 | 8:+54040138 | None:intergenic |
TAATTTGGCTTCCATTTGTA+GGG | 0.474687 | 8:-54040178 | MsG0880045088.01.T01:CDS |
ATCCCGCAGTTCAAGGCCTT+CGG | 0.484537 | 8:-54036917 | MsG0880045088.01.T01:intron |
GTGTAGGTTCATTGAGTGGT+TGG | 0.488555 | 8:-54040265 | MsG0880045088.01.T01:intron |
CATCCTTATCGTTGAGGTAA+GGG | 0.488826 | 8:-54038376 | MsG0880045088.01.T01:intron |
AGACCCTTACCTCAACGATA+AGG | 0.491775 | 8:+54038373 | None:intergenic |
TGGTTGGGATGTTGCTGTGG+TGG | 0.495834 | 8:-54040249 | MsG0880045088.01.T01:CDS |
CCTTTGTTGAGAGGAAAGCT+TGG | 0.499952 | 8:-54040510 | MsG0880045088.01.T01:CDS |
ATTCCAGTGAAACGTCGGTC+TGG | 0.500173 | 8:-54039274 | MsG0880045088.01.T01:CDS |
ACATCCTTATCGTTGAGGTA+AGG | 0.506767 | 8:-54038377 | MsG0880045088.01.T01:CDS |
GCATGATACGCTTTCTCTTG+AGG | 0.511167 | 8:+54039196 | None:intergenic |
AGAATTTCAAGAAGAGGTCA+AGG | 0.513955 | 8:-54038788 | MsG0880045088.01.T01:CDS |
TTTGTCCCAGGCAACTGCGC+AGG | 0.514458 | 8:-54037601 | MsG0880045088.01.T01:intron |
TGAGAAGGTGAAGTTGAAAG+AGG | 0.517970 | 8:-54040217 | MsG0880045088.01.T01:CDS |
TTCTTAGACCCTTTGTTGAG+AGG | 0.521603 | 8:-54040519 | MsG0880045088.01.T01:CDS |
CTCCATCCGTGTCTTTCTAG+TGG | 0.522923 | 8:+54038645 | None:intergenic |
CAAGCTTTCCTCTCAACAAA+GGG | 0.525491 | 8:+54040511 | None:intergenic |
GGTCAAGGCTTTAGAAGTTG+AGG | 0.528592 | 8:-54038773 | MsG0880045088.01.T01:CDS |
ACAAATAGGCACATTCAAGT+TGG | 0.530121 | 8:+54036867 | None:intergenic |
AGACACTGTAAAAGGAAGCT+TGG | 0.535351 | 8:+54040107 | None:intergenic |
CTTTAGAAGTTGAGGACTGT+GGG | 0.546640 | 8:-54038765 | MsG0880045088.01.T01:CDS |
AGAGAAAGAATTTCAAGAAG+AGG | 0.551008 | 8:-54038794 | MsG0880045088.01.T01:CDS |
AGATAAAGAAAACATTGTAA+AGG | 0.551219 | 8:-54039221 | MsG0880045088.01.T01:CDS |
CCAAGCTTTCCTCTCAACAA+AGG | 0.551769 | 8:+54040510 | None:intergenic |
CAGAACTTTGCCATCAAATG+TGG | 0.556265 | 8:+54038401 | None:intergenic |
GATCAAGATCGGTGAGAGGT+AGG | 0.562213 | 8:+54038683 | None:intergenic |
GCTAAAATTGAAGTTCATGT+TGG | 0.562915 | 8:+54039420 | None:intergenic |
GATTAGGCGTGCAACAATGT+CGG | 0.572033 | 8:-54040024 | MsG0880045088.01.T01:intron |
AGACGAACTTTGATCAAGAT+CGG | 0.586612 | 8:+54038672 | None:intergenic |
GTGATATTGCTACCTCTGCA+TGG | 0.587930 | 8:+54039816 | None:intergenic |
CAATATCACAACAACCAAGA+TGG | 0.588239 | 8:-54039802 | MsG0880045088.01.T01:CDS |
GTAGAAGTGAATCACGTTGG+CGG | 0.590038 | 8:-54038531 | MsG0880045088.01.T01:CDS |
TCTGAACATCCTTATCGTTG+AGG | 0.592963 | 8:-54038382 | MsG0880045088.01.T01:CDS |
GAGTGGTTGGGATGTTGCTG+TGG | 0.602776 | 8:-54040252 | MsG0880045088.01.T01:CDS |
GCTTTAGAAGTTGAGGACTG+TGG | 0.603990 | 8:-54038766 | MsG0880045088.01.T01:CDS |
AGTATTTGATGCAGAAAACA+AGG | 0.604081 | 8:-54037554 | MsG0880045088.01.T01:intron |
CGCAGTTCAAGGCCTTCGGT+AGG | 0.604265 | 8:-54036913 | MsG0880045088.01.T01:intron |
TCTTGTGTAGGTTCATTGAG+TGG | 0.606506 | 8:-54040269 | MsG0880045088.01.T01:intron |
TCACAGAATTCTCCTACCGA+AGG | 0.619526 | 8:+54036901 | None:intergenic |
AATATGGAAATGATCCAACT+AGG | 0.624297 | 8:-54040468 | MsG0880045088.01.T01:intron |
AATATATAATGGAATTGCAG+AGG | 0.626528 | 8:-54038819 | MsG0880045088.01.T01:CDS |
AGGAGGAACAGAATAAAACA+AGG | 0.627576 | 8:-54039148 | MsG0880045088.01.T01:CDS |
GGACAGAGTAGCAATTCTTG+AGG | 0.640821 | 8:-54038851 | MsG0880045088.01.T01:CDS |
GATATACAGTGTCCATGCAG+AGG | 0.645912 | 8:-54039828 | MsG0880045088.01.T01:CDS |
TTATCACAGAGAGGAATAGG+AGG | 0.649501 | 8:-54039165 | MsG0880045088.01.T01:CDS |
CAAGTAGAAGTGAATCACGT+TGG | 0.650134 | 8:-54038534 | MsG0880045088.01.T01:CDS |
TTCCACTAGAAAGACACGGA+TGG | 0.652546 | 8:-54038647 | MsG0880045088.01.T01:CDS |
AAAGACACAGAACTTGCAGA+AGG | 0.652576 | 8:-54038715 | MsG0880045088.01.T01:CDS |
TCTAGTCCCTAATATAACCA+AGG | 0.659673 | 8:-54039107 | MsG0880045088.01.T01:intron |
ACCAAGATGGCTTATCCATG+AGG | 0.659718 | 8:-54039789 | MsG0880045088.01.T01:intron |
CTGATTCCACTAGAAAGACA+CGG | 0.659773 | 8:-54038651 | MsG0880045088.01.T01:CDS |
CACTAGAAAGACACGGATGG+AGG | 0.661720 | 8:-54038644 | MsG0880045088.01.T01:intron |
ATAAAATTCCAGTGAAACGT+CGG | 0.667187 | 8:-54039279 | MsG0880045088.01.T01:CDS |
CTTTGATCAAGATCGGTGAG+AGG | 0.680787 | 8:+54038679 | None:intergenic |
TGGTGGTGGAAATATTGAGA+AGG | 0.686408 | 8:-54040232 | MsG0880045088.01.T01:CDS |
GGAGGAACAGAATAAAACAA+GGG | 0.689769 | 8:-54039147 | MsG0880045088.01.T01:CDS |
TTGTGCTGTGAGCAGAAGCA+AGG | 0.689984 | 8:-54038489 | MsG0880045088.01.T01:CDS |
AGTCAGAACAAAGACTTGTG+AGG | 0.691527 | 8:-54040136 | MsG0880045088.01.T01:CDS |
GGTTGATTCAAATATTCACG+AGG | 0.705968 | 8:+54039322 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGATTAAACATAAAAAAA+TGG | + | Chr8:54037524-54037543 | None:intergenic | 10.0% |
!! | ATAAAAATTAATTTACCTCA+TGG | + | Chr8:54037628-54037647 | None:intergenic | 15.0% |
!! | TAAACAATTTATATATACCT+TGG | + | Chr8:54038312-54038331 | None:intergenic | 15.0% |
!! | TTACAAATGAATAACAAAAT+GGG | + | Chr8:54036966-54036985 | None:intergenic | 15.0% |
!! | TTTACAAATGAATAACAAAA+TGG | + | Chr8:54036967-54036986 | None:intergenic | 15.0% |
!!! | AATTTTTGATTAAGATAATG+TGG | + | Chr8:54039447-54039466 | None:intergenic | 15.0% |
!!! | ATTTTTGATTAAGATAATGT+GGG | + | Chr8:54039446-54039465 | None:intergenic | 15.0% |
!! | AAATCTTAGCACTTATTTAT+TGG | - | Chr8:54037805-54037824 | MsG0880045088.01.T01:intron | 20.0% |
!! | AACGAGTTTATAGATAATAA+CGG | + | Chr8:54039915-54039934 | None:intergenic | 20.0% |
!! | AACTTGTGAAGAAAATAATT+TGG | - | Chr8:54037206-54037225 | MsG0880045088.01.T01:intron | 20.0% |
!! | AAGCTAAATAGAACAAAAAT+TGG | - | Chr8:54040369-54040388 | MsG0880045088.01.T01:intron | 20.0% |
!! | AGATAAAGAAAACATTGTAA+AGG | - | Chr8:54038178-54038197 | MsG0880045088.01.T01:intron | 20.0% |
!! | ATATATACCTTGGTTATATT+AGG | + | Chr8:54038302-54038321 | None:intergenic | 20.0% |
!! | ATCTCTATTACTAATGATTA+AGG | - | Chr8:54040280-54040299 | MsG0880045088.01.T01:intron | 20.0% |
!! | TAAATAGAACAAAAATTGGA+GGG | - | Chr8:54040373-54040392 | MsG0880045088.01.T01:intron | 20.0% |
!! | TATATACCTTGGTTATATTA+GGG | + | Chr8:54038301-54038320 | None:intergenic | 20.0% |
!! | TCATGATATTTATATCTTCT+GGG | + | Chr8:54037896-54037915 | None:intergenic | 20.0% |
!! | TGTTTAATCATTGAAATGAA+AGG | - | Chr8:54037532-54037551 | MsG0880045088.01.T01:intron | 20.0% |
!! | TTATCATTTGATTCAAACTA+TGG | - | Chr8:54038044-54038063 | MsG0880045088.01.T01:intron | 20.0% |
!! | TTCAATATAATTATGTGTGT+CGG | + | Chr8:54037423-54037442 | None:intergenic | 20.0% |
!! | TTCATGATATTTATATCTTC+TGG | + | Chr8:54037897-54037916 | None:intergenic | 20.0% |
!!! | AAGTAGTTTTTATAGTGATA+CGG | + | Chr8:54040186-54040205 | None:intergenic | 20.0% |
!!! | GAGGTAAATTAATTTTTATG+TGG | - | Chr8:54037629-54037648 | MsG0880045088.01.T01:intron | 20.0% |
!!! | TAGTTTTTCAAAATTGTCTA+CGG | + | Chr8:54039641-54039660 | None:intergenic | 20.0% |
!!! | TATATTCGATTTGAAGTATT+CGG | + | Chr8:54039545-54039564 | None:intergenic | 20.0% |
!!! | TCATTTTCTCAAGTTATTAT+TGG | - | Chr8:54037032-54037051 | MsG0880045088.01.T01:intron | 20.0% |
!!! | TGTAAAAAGATAAGTTTTTG+AGG | + | Chr8:54040311-54040330 | None:intergenic | 20.0% |
! | AAAACTAGAGATTTCATTCA+TGG | - | Chr8:54039654-54039673 | MsG0880045088.01.T01:CDS | 25.0% |
! | AATGAAGCATAAATACTCTT+CGG | - | Chr8:54037353-54037372 | MsG0880045088.01.T01:intron | 25.0% |
! | AATGAGATTATTGTAGATAG+TGG | + | Chr8:54039576-54039595 | None:intergenic | 25.0% |
! | AATTATGAAGTTGAGGAAAA+TGG | - | Chr8:54039884-54039903 | MsG0880045088.01.T01:intron | 25.0% |
! | ATTGAATATCCATTCTTTCT+TGG | - | Chr8:54040008-54040027 | MsG0880045088.01.T01:intron | 25.0% |
! | CTAAATAGAACAAAAATTGG+AGG | - | Chr8:54040372-54040391 | MsG0880045088.01.T01:intron | 25.0% |
! | CTTTAGTATTTCAATTAGAC+AGG | - | Chr8:54039161-54039180 | MsG0880045088.01.T01:CDS | 25.0% |
! | GAAATTCTTAAATGTACATC+AGG | + | Chr8:54040231-54040250 | None:intergenic | 25.0% |
! | GTTATTATCTATAAACTCGT+TGG | - | Chr8:54039914-54039933 | MsG0880045088.01.T01:intron | 25.0% |
! | TATAAAGCAAGAAGCAATAT+CGG | - | Chr8:54037944-54037963 | MsG0880045088.01.T01:intron | 25.0% |
! | TATCTCCATATTTAAAGACT+AGG | - | Chr8:54039688-54039707 | MsG0880045088.01.T01:intron | 25.0% |
! | TATGAAGCATATATACTCAT+CGG | - | Chr8:54036991-54037010 | MsG0880045088.01.T01:intron | 25.0% |
! | TCAAGTTATTATTGGTATTG+AGG | - | Chr8:54037040-54037059 | MsG0880045088.01.T01:intron | 25.0% |
! | TCTAATTGAAATACTAAAGC+TGG | + | Chr8:54039160-54039179 | None:intergenic | 25.0% |
! | TTAAGCTTAAATACTAGAAG+TGG | + | Chr8:54039400-54039419 | None:intergenic | 25.0% |
! | TTGAAGCTTCAACAAAATTA+CGG | - | Chr8:54038449-54038468 | MsG0880045088.01.T01:CDS | 25.0% |
! | TTGAATATCCATTCTTTCTT+GGG | - | Chr8:54040009-54040028 | MsG0880045088.01.T01:intron | 25.0% |
! | TTTGTAGCATAATCATTGTA+AGG | + | Chr8:54040059-54040078 | None:intergenic | 25.0% |
!! | AAATACTCTCTGATTTTCTT+CGG | + | Chr8:54039832-54039851 | None:intergenic | 25.0% |
!! | AATATATAATGGAATTGCAG+AGG | - | Chr8:54038580-54038599 | MsG0880045088.01.T01:intron | 25.0% |
!! | AGAATCTAGAATCGAAAAAT+AGG | - | Chr8:54040157-54040176 | MsG0880045088.01.T01:CDS | 25.0% |
!! | ATCAACCTAGTCTTTAAATA+TGG | + | Chr8:54039696-54039715 | None:intergenic | 25.0% |
!!! | AACTAGCTTATGATTTTTCA+TGG | + | Chr8:54039097-54039116 | None:intergenic | 25.0% |
!!! | CAAGTTTTAATCCCTATTAT+TGG | - | Chr8:54037742-54037761 | MsG0880045088.01.T01:intron | 25.0% |
!!! | CGTTTCGTTTTTTAATACTA+GGG | + | Chr8:54040347-54040366 | None:intergenic | 25.0% |
!!! | GTTGTTTTTTTACTATGTCA+TGG | - | Chr8:54038806-54038825 | MsG0880045088.01.T01:CDS | 25.0% |
!!! | GTTTCGTTTTTTAATACTAG+GGG | + | Chr8:54040346-54040365 | None:intergenic | 25.0% |
!!! | TATGTTGTTGTTTGGAAATA+TGG | - | Chr8:54036915-54036934 | MsG0880045088.01.T01:intron | 25.0% |
!!! | TCGTTTCGTTTTTTAATACT+AGG | + | Chr8:54040348-54040367 | None:intergenic | 25.0% |
!!! | TTAACTGTTAATGTTTTGAC+AGG | - | Chr8:54037705-54037724 | MsG0880045088.01.T01:intron | 25.0% |
!!! | TTCTGCAAGATTTTTTAGTT+TGG | + | Chr8:54040141-54040160 | None:intergenic | 25.0% |
AAATCTTCTCAATCCAACAA+AGG | - | Chr8:54040251-54040270 | MsG0880045088.01.T01:CDS | 30.0% | |
AACCTACACAAGAGAAATAT+TGG | + | Chr8:54037123-54037142 | None:intergenic | 30.0% | |
AATATAATTATGTGTGTCGG+TGG | + | Chr8:54037420-54037439 | None:intergenic | 30.0% | |
AATATGGAAATGATCCAACT+AGG | - | Chr8:54036931-54036950 | MsG0880045088.01.T01:intron | 30.0% | |
ACAAAGCAATTATGAAGTTG+AGG | - | Chr8:54039877-54039896 | MsG0880045088.01.T01:intron | 30.0% | |
AGAGAAAGAATTTCAAGAAG+AGG | - | Chr8:54038605-54038624 | MsG0880045088.01.T01:intron | 30.0% | |
AGTATTTGATGCAGAAAACA+AGG | - | Chr8:54039845-54039864 | MsG0880045088.01.T01:CDS | 30.0% | |
ATAAAATTCCAGTGAAACGT+CGG | - | Chr8:54038120-54038139 | MsG0880045088.01.T01:intron | 30.0% | |
ATCCAATATTTCTCTTGTGT+AGG | - | Chr8:54037118-54037137 | MsG0880045088.01.T01:intron | 30.0% | |
ATGGAAGCAATAGATTCATT+TGG | - | Chr8:54038949-54038968 | MsG0880045088.01.T01:intron | 30.0% | |
CTAAAAATCTTATCACAGAG+AGG | - | Chr8:54038225-54038244 | MsG0880045088.01.T01:intron | 30.0% | |
GAATAAAGAGACACTGTAAA+AGG | + | Chr8:54037303-54037322 | None:intergenic | 30.0% | |
GATAGAGAATCAATGAAACA+GGG | + | Chr8:54039730-54039749 | None:intergenic | 30.0% | |
GCTAAAATTGAAGTTCATGT+TGG | + | Chr8:54037982-54038001 | None:intergenic | 30.0% | |
GGATGCGATTGAATATATAA+TGG | - | Chr8:54038569-54038588 | MsG0880045088.01.T01:intron | 30.0% | |
TAACCTCGTTACAATAGAAA+GGG | + | Chr8:54039775-54039794 | None:intergenic | 30.0% | |
TGAGTTTGCCATAATTACAT+TGG | - | Chr8:54038397-54038416 | MsG0880045088.01.T01:CDS | 30.0% | |
TTAACCTCGTTACAATAGAA+AGG | + | Chr8:54039776-54039795 | None:intergenic | 30.0% | |
TTAAGCTTAAAAGCTTACAG+CGG | - | Chr8:54039410-54039429 | MsG0880045088.01.T01:CDS | 30.0% | |
TTACAGTGTCTCTTTATTCT+AGG | - | Chr8:54037304-54037323 | MsG0880045088.01.T01:intron | 30.0% | |
TTCGTATGATCAAAATAGAG+CGG | - | Chr8:54039300-54039319 | MsG0880045088.01.T01:CDS | 30.0% | |
! | AATACTCTCTGATTTTCTTC+GGG | + | Chr8:54039831-54039850 | None:intergenic | 30.0% |
! | ATAATTTGGCTTCCATTTGT+AGG | - | Chr8:54037220-54037239 | MsG0880045088.01.T01:intron | 30.0% |
! | CTGGAATTTTATTGTGTTTG+TGG | + | Chr8:54038112-54038131 | None:intergenic | 30.0% |
! | TAATTTGGCTTCCATTTGTA+GGG | - | Chr8:54037221-54037240 | MsG0880045088.01.T01:intron | 30.0% |
! | TAGTTTTTATAGTGATACGG+TGG | + | Chr8:54040183-54040202 | None:intergenic | 30.0% |
! | TATAACTTTTACCGAAATCG+TGG | + | Chr8:54038427-54038446 | None:intergenic | 30.0% |
! | TTGTGTTTGTGGATTTTAAG+TGG | + | Chr8:54038101-54038120 | None:intergenic | 30.0% |
! | TTTTTAATACTAGGGGATGA+TGG | + | Chr8:54040339-54040358 | None:intergenic | 30.0% |
!! | AACTTCAATTTTAGCATGGA+AGG | - | Chr8:54037987-54038006 | MsG0880045088.01.T01:intron | 30.0% |
!! | CATGAACTTCAATTTTAGCA+TGG | - | Chr8:54037983-54038002 | MsG0880045088.01.T01:intron | 30.0% |
!! | GTTTTAATCCCTATTATTGG+CGG | - | Chr8:54037745-54037764 | MsG0880045088.01.T01:intron | 30.0% |
AACATAGCCGAATCATTCTT+TGG | + | Chr8:54039208-54039227 | None:intergenic | 35.0% | |
AAGGGAATCTGATGAACTTA+CGG | + | Chr8:54039757-54039776 | None:intergenic | 35.0% | |
AATCTGATGAACTTACGGAT+GGG | + | Chr8:54039752-54039771 | None:intergenic | 35.0% | |
AATGATAAGTGCTCAGTTGA+AGG | + | Chr8:54038032-54038051 | None:intergenic | 35.0% | |
ACAAATAGGCACATTCAAGT+TGG | + | Chr8:54040535-54040554 | None:intergenic | 35.0% | |
AGAATTTCAAGAAGAGGTCA+AGG | - | Chr8:54038611-54038630 | MsG0880045088.01.T01:intron | 35.0% | |
AGACGAACTTTGATCAAGAT+CGG | + | Chr8:54038730-54038749 | None:intergenic | 35.0% | |
AGCAACTTCATAGAAAAAGC+TGG | - | Chr8:54039972-54039991 | MsG0880045088.01.T01:intron | 35.0% | |
AGGAGGAACAGAATAAAACA+AGG | - | Chr8:54038251-54038270 | MsG0880045088.01.T01:intron | 35.0% | |
ATCTTATCACAGAGAGGAAT+AGG | - | Chr8:54038231-54038250 | MsG0880045088.01.T01:intron | 35.0% | |
ATGAAGTATAGACTCAGACA+CGG | + | Chr8:54037485-54037504 | None:intergenic | 35.0% | |
ATTCCCTTTCTATTGTAACG+AGG | - | Chr8:54039769-54039788 | MsG0880045088.01.T01:intron | 35.0% | |
CAATATCACAACAACCAAGA+TGG | - | Chr8:54037597-54037616 | MsG0880045088.01.T01:intron | 35.0% | |
CTTCCTTCCAAAGAATGATT+CGG | - | Chr8:54039198-54039217 | MsG0880045088.01.T01:CDS | 35.0% | |
GCATAAATACTCTTCGGATT+AGG | - | Chr8:54037359-54037378 | MsG0880045088.01.T01:intron | 35.0% | |
GGAGGAACAGAATAAAACAA+GGG | - | Chr8:54038252-54038271 | MsG0880045088.01.T01:intron | 35.0% | |
GGATAGAGAATCAATGAAAC+AGG | + | Chr8:54039731-54039750 | None:intergenic | 35.0% | |
GTAAGGAAATAATCGATTGC+TGG | + | Chr8:54040042-54040061 | None:intergenic | 35.0% | |
GTCATAAACCCAAGAAAGAA+TGG | + | Chr8:54040020-54040039 | None:intergenic | 35.0% | |
TAACTTGAGAAAATGACACC+AGG | + | Chr8:54037028-54037047 | None:intergenic | 35.0% | |
TAGAGATCTCTTACCTTTGT+TGG | + | Chr8:54040267-54040286 | None:intergenic | 35.0% | |
TATGAAGTTGAGGAAAATGG+TGG | - | Chr8:54039887-54039906 | MsG0880045088.01.T01:intron | 35.0% | |
TCTAGTCCCTAATATAACCA+AGG | - | Chr8:54038292-54038311 | MsG0880045088.01.T01:intron | 35.0% | |
TCTGACTGGATGATGAAAAA+GGG | + | Chr8:54037250-54037269 | None:intergenic | 35.0% | |
TTCTGACTGGATGATGAAAA+AGG | + | Chr8:54037251-54037270 | None:intergenic | 35.0% | |
! | AAACTCGTTGGCTGAAAAAT+TGG | - | Chr8:54039926-54039945 | MsG0880045088.01.T01:intron | 35.0% |
! | AAGAATGATTCGGCTATGTT+TGG | - | Chr8:54039208-54039227 | MsG0880045088.01.T01:CDS | 35.0% |
! | ATCATAACACAGCATGCTTT+TGG | + | Chr8:54040464-54040483 | None:intergenic | 35.0% |
! | CTTGGGATTATGTTGTTGTT+TGG | - | Chr8:54036907-54036926 | MsG0880045088.01.T01:CDS | 35.0% |
! | GGAATGTGAAAAGTGTGATT+TGG | + | Chr8:54039139-54039158 | None:intergenic | 35.0% |
! | GGTTGATTCAAATATTCACG+AGG | + | Chr8:54038080-54038099 | None:intergenic | 35.0% |
! | GTGTCTAATCCTCTCAATTT+TGG | - | Chr8:54038520-54038539 | MsG0880045088.01.T01:CDS | 35.0% |
! | TGATCAAAATAGAGCGGTTT+TGG | - | Chr8:54039306-54039325 | MsG0880045088.01.T01:CDS | 35.0% |
!! | AAAAAGGGTATCCCTACAAA+TGG | + | Chr8:54037235-54037254 | None:intergenic | 35.0% |
!! | TGAAAAGTGTGATTTGGTGT+GGG | + | Chr8:54039133-54039152 | None:intergenic | 35.0% |
!!! | ATGGGTTTTTAGTACCTAGT+TGG | + | Chr8:54036948-54036967 | None:intergenic | 35.0% |
AAAGACACAGAACTTGCAGA+AGG | - | Chr8:54038684-54038703 | MsG0880045088.01.T01:CDS | 40.0% | |
AAATTGTCTACGGCTCTGTT+TGG | + | Chr8:54039631-54039650 | None:intergenic | 40.0% | |
ACATCCTTATCGTTGAGGTA+AGG | - | Chr8:54039022-54039041 | MsG0880045088.01.T01:intron | 40.0% | |
AGACACTGTAAAAGGAAGCT+TGG | + | Chr8:54037295-54037314 | None:intergenic | 40.0% | |
AGTCAGAACAAAGACTTGTG+AGG | - | Chr8:54037263-54037282 | MsG0880045088.01.T01:intron | 40.0% | |
CAACAAGACCGCCAATAATA+GGG | + | Chr8:54037756-54037775 | None:intergenic | 40.0% | |
CAAGCTTTCCTCTCAACAAA+GGG | + | Chr8:54036891-54036910 | None:intergenic | 40.0% | |
CAAGTAGAAGTGAATCACGT+TGG | - | Chr8:54038865-54038884 | MsG0880045088.01.T01:intron | 40.0% | |
CAGAACTTTGCCATCAAATG+TGG | + | Chr8:54039001-54039020 | None:intergenic | 40.0% | |
CATCCTTATCGTTGAGGTAA+GGG | - | Chr8:54039023-54039042 | MsG0880045088.01.T01:intron | 40.0% | |
CTGATTCCACTAGAAAGACA+CGG | - | Chr8:54038748-54038767 | MsG0880045088.01.T01:CDS | 40.0% | |
CTTCATAGAAAAAGCTGGAC+TGG | - | Chr8:54039977-54039996 | MsG0880045088.01.T01:intron | 40.0% | |
CTTTGTTGAGAGGAAAGCTT+GGG | - | Chr8:54036890-54036909 | MsG0880045088.01.T01:CDS | 40.0% | |
GAATCTGATGAACTTACGGA+TGG | + | Chr8:54039753-54039772 | None:intergenic | 40.0% | |
GCAAACATGACCACATTTGA+TGG | - | Chr8:54038988-54039007 | MsG0880045088.01.T01:intron | 40.0% | |
GTGGTGGTCCAATGTAATTA+TGG | + | Chr8:54038408-54038427 | None:intergenic | 40.0% | |
TAGCCGAATCATTCTTTGGA+AGG | + | Chr8:54039204-54039223 | None:intergenic | 40.0% | |
TCAACAAGACCGCCAATAAT+AGG | + | Chr8:54037757-54037776 | None:intergenic | 40.0% | |
TCACAAGTCTTTGTTCTGAC+TGG | + | Chr8:54037264-54037283 | None:intergenic | 40.0% | |
TCGAGTGTCTATTGCAGAAA+TGG | - | Chr8:54038149-54038168 | MsG0880045088.01.T01:intron | 40.0% | |
TCTGAACATCCTTATCGTTG+AGG | - | Chr8:54039017-54039036 | MsG0880045088.01.T01:intron | 40.0% | |
TCTTGTGTAGGTTCATTGAG+TGG | - | Chr8:54037130-54037149 | MsG0880045088.01.T01:intron | 40.0% | |
TGAGAAGGTGAAGTTGAAAG+AGG | - | Chr8:54037182-54037201 | MsG0880045088.01.T01:intron | 40.0% | |
TGTAGGTTCATTGAGTGGTT+GGG | - | Chr8:54037135-54037154 | MsG0880045088.01.T01:intron | 40.0% | |
TTATCACAGAGAGGAATAGG+AGG | - | Chr8:54038234-54038253 | MsG0880045088.01.T01:intron | 40.0% | |
TTCTTAGACCCTTTGTTGAG+AGG | - | Chr8:54036880-54036899 | MsG0880045088.01.T01:CDS | 40.0% | |
! | AACAAGGGCTTTTTACACTC+AGG | - | Chr8:54038267-54038286 | MsG0880045088.01.T01:intron | 40.0% |
! | AACTTTTACCGAAATCGTGG+TGG | + | Chr8:54038424-54038443 | None:intergenic | 40.0% |
! | ACGAGGTTAAATTTTGTCCC+AGG | - | Chr8:54039786-54039805 | MsG0880045088.01.T01:intron | 40.0% |
! | AGAAGCAAGGTGTGTTTTCA+AGG | - | Chr8:54038923-54038942 | MsG0880045088.01.T01:intron | 40.0% |
! | ATTTTGCACAAGTGCCTGTT+TGG | - | Chr8:54038367-54038386 | MsG0880045088.01.T01:intron | 40.0% |
! | CGAATCATTCTTTGGAAGGA+AGG | + | Chr8:54039200-54039219 | None:intergenic | 40.0% |
! | CTTTAGAAGTTGAGGACTGT+GGG | - | Chr8:54038634-54038653 | MsG0880045088.01.T01:intron | 40.0% |
!! | AGGTGTGTTTTCAAGGTTGA+TGG | - | Chr8:54038930-54038949 | MsG0880045088.01.T01:intron | 40.0% |
!! | ATCCTCTCAATTTTGGCAGA+TGG | - | Chr8:54038527-54038546 | MsG0880045088.01.T01:CDS | 40.0% |
!! | CGTCTTTTTGCAGTTTTAGC+AGG | + | Chr8:54040118-54040137 | None:intergenic | 40.0% |
!! | GTGAAAAGTGTGATTTGGTG+TGG | + | Chr8:54039134-54039153 | None:intergenic | 40.0% |
!! | TGGTGGTGGAAATATTGAGA+AGG | - | Chr8:54037167-54037186 | MsG0880045088.01.T01:intron | 40.0% |
!!! | ATGTTTTGACAGGACTCAGT+TGG | - | Chr8:54037715-54037734 | MsG0880045088.01.T01:intron | 40.0% |
AAACTCACCGTCAACCAAAC+AGG | + | Chr8:54038384-54038403 | None:intergenic | 45.0% | |
ACAAGTGCCTGTTTGGTTGA+CGG | - | Chr8:54038374-54038393 | MsG0880045088.01.T01:intron | 45.0% | |
ACATTGGACCACCACGATTT+CGG | - | Chr8:54038413-54038432 | MsG0880045088.01.T01:CDS | 45.0% | |
ACCAAGATGGCTTATCCATG+AGG | - | Chr8:54037610-54037629 | MsG0880045088.01.T01:intron | 45.0% | |
ACCTCATGGATAAGCCATCT+TGG | + | Chr8:54037614-54037633 | None:intergenic | 45.0% | |
ACTCAGACACGACACAGATA+TGG | + | Chr8:54037069-54037088 | None:intergenic | 45.0% | |
AGACCCTTACCTCAACGATA+AGG | + | Chr8:54039029-54039048 | None:intergenic | 45.0% | |
CCAAGCTTTCCTCTCAACAA+AGG | + | Chr8:54036892-54036911 | None:intergenic | 45.0% | |
CCTTTGTTGAGAGGAAAGCT+TGG | - | Chr8:54036889-54036908 | MsG0880045088.01.T01:CDS | 45.0% | |
CTTTGATCAAGATCGGTGAG+AGG | + | Chr8:54038723-54038742 | None:intergenic | 45.0% | |
GATATACAGTGTCCATGCAG+AGG | - | Chr8:54037571-54037590 | MsG0880045088.01.T01:CDS | 45.0% | |
GATTAGGCGTGCAACAATGT+CGG | - | Chr8:54037375-54037394 | MsG0880045088.01.T01:intron | 45.0% | |
GCATGATACGCTTTCTCTTG+AGG | + | Chr8:54038206-54038225 | None:intergenic | 45.0% | |
GGACAGAGTAGCAATTCTTG+AGG | - | Chr8:54038548-54038567 | MsG0880045088.01.T01:intron | 45.0% | |
GTAGAAGTGAATCACGTTGG+CGG | - | Chr8:54038868-54038887 | MsG0880045088.01.T01:intron | 45.0% | |
GTCCATCTGCCAAAATTGAG+AGG | + | Chr8:54038532-54038551 | None:intergenic | 45.0% | |
GTGATATTGCTACCTCTGCA+TGG | + | Chr8:54037586-54037605 | None:intergenic | 45.0% | |
GTGTAGGTTCATTGAGTGGT+TGG | - | Chr8:54037134-54037153 | MsG0880045088.01.T01:intron | 45.0% | |
TCACAGAATTCTCCTACCGA+AGG | + | Chr8:54040501-54040520 | None:intergenic | 45.0% | |
TGTTATGATCCCGCAGTTCA+AGG | - | Chr8:54040475-54040494 | MsG0880045088.01.T01:CDS | 45.0% | |
TTCCACTAGAAAGACACGGA+TGG | - | Chr8:54038752-54038771 | MsG0880045088.01.T01:CDS | 45.0% | |
! | ATTATGTGTGTCGGTGGTGT+CGG | + | Chr8:54037414-54037433 | None:intergenic | 45.0% |
! | CTTTGGAAGGAAGGTACAAG+TGG | + | Chr8:54039191-54039210 | None:intergenic | 45.0% |
! | GCTATTTGCTACAAGCTAGC+AGG | + | Chr8:54039243-54039262 | None:intergenic | 45.0% |
! | TCATCGGATTAGACATGTCC+TGG | - | Chr8:54037007-54037026 | MsG0880045088.01.T01:intron | 45.0% |
!! | GCTTTAGAAGTTGAGGACTG+TGG | - | Chr8:54038633-54038652 | MsG0880045088.01.T01:intron | 45.0% |
!! | GGTCAAGGCTTTAGAAGTTG+AGG | - | Chr8:54038626-54038645 | MsG0880045088.01.T01:intron | 45.0% |
AATATCCTGCGCAGTTGCCT+GGG | + | Chr8:54039806-54039825 | None:intergenic | 50.0% | |
ATCGGTGAGAGGTAGGTTTC+TGG | + | Chr8:54038712-54038731 | None:intergenic | 50.0% | |
ATTCCAGTGAAACGTCGGTC+TGG | - | Chr8:54038125-54038144 | MsG0880045088.01.T01:intron | 50.0% | |
CACTAGAAAGACACGGATGG+AGG | - | Chr8:54038755-54038774 | MsG0880045088.01.T01:CDS | 50.0% | |
CTCCATCCGTGTCTTTCTAG+TGG | + | Chr8:54038757-54038776 | None:intergenic | 50.0% | |
GATCAAGATCGGTGAGAGGT+AGG | + | Chr8:54038719-54038738 | None:intergenic | 50.0% | |
TGTCTGAGTTCGTGCTTGAC+AGG | - | Chr8:54037080-54037099 | MsG0880045088.01.T01:intron | 50.0% | |
TTGTGCTGTGAGCAGAAGCA+AGG | - | Chr8:54038910-54038929 | MsG0880045088.01.T01:intron | 50.0% | |
ATCCCGCAGTTCAAGGCCTT+CGG | - | Chr8:54040482-54040501 | MsG0880045088.01.T01:CDS | 55.0% | |
CTACCGAAGGCCTTGAACTG+CGG | + | Chr8:54040488-54040507 | None:intergenic | 55.0% | |
GAACCAGACCGACGTTTCAC+TGG | + | Chr8:54038131-54038150 | None:intergenic | 55.0% | |
GAATATCCTGCGCAGTTGCC+TGG | + | Chr8:54039807-54039826 | None:intergenic | 55.0% | |
GAGTGGTTGGGATGTTGCTG+TGG | - | Chr8:54037147-54037166 | MsG0880045088.01.T01:intron | 55.0% | |
TACCGAAGGCCTTGAACTGC+GGG | + | Chr8:54040487-54040506 | None:intergenic | 55.0% | |
TGGTTGGGATGTTGCTGTGG+TGG | - | Chr8:54037150-54037169 | MsG0880045088.01.T01:intron | 55.0% | |
TTGGGATGTTGCTGTGGTGG+TGG | - | Chr8:54037153-54037172 | MsG0880045088.01.T01:intron | 55.0% | |
CGCAGTTCAAGGCCTTCGGT+AGG | - | Chr8:54040486-54040505 | MsG0880045088.01.T01:CDS | 60.0% | |
TTTGTCCCAGGCAACTGCGC+AGG | - | Chr8:54039798-54039817 | MsG0880045088.01.T01:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr8 | gene | 54036864 | 54040557 | 54036864 | ID=MsG0880045088.01;Name=MsG0880045088.01 |
Chr8 | mRNA | 54036864 | 54040557 | 54036864 | ID=MsG0880045088.01.T01;Parent=MsG0880045088.01;Name=MsG0880045088.01.T01;_AED=0.09;_eAED=0.09;_QI=0|0|0|0.8|0.55|0.5|10|0|470 |
Chr8 | exon | 54040469 | 54040557 | 54040469 | ID=MsG0880045088.01.T01:exon:23288;Parent=MsG0880045088.01.T01 |
Chr8 | exon | 54040096 | 54040281 | 54040096 | ID=MsG0880045088.01.T01:exon:23287;Parent=MsG0880045088.01.T01 |
Chr8 | exon | 54040013 | 54040040 | 54040013 | ID=MsG0880045088.01.T01:exon:23286;Parent=MsG0880045088.01.T01 |
Chr8 | exon | 54039790 | 54039867 | 54039790 | ID=MsG0880045088.01.T01:exon:23285;Parent=MsG0880045088.01.T01 |
Chr8 | exon | 54039626 | 54039694 | 54039626 | ID=MsG0880045088.01.T01:exon:23284;Parent=MsG0880045088.01.T01 |
Chr8 | exon | 54039108 | 54039530 | 54039108 | ID=MsG0880045088.01.T01:exon:23283;Parent=MsG0880045088.01.T01 |
Chr8 | exon | 54038645 | 54038875 | 54038645 | ID=MsG0880045088.01.T01:exon:23282;Parent=MsG0880045088.01.T01 |
Chr8 | exon | 54038377 | 54038559 | 54038377 | ID=MsG0880045088.01.T01:exon:23281;Parent=MsG0880045088.01.T01 |
Chr8 | exon | 54037555 | 54037613 | 54037555 | ID=MsG0880045088.01.T01:exon:23280;Parent=MsG0880045088.01.T01 |
Chr8 | exon | 54036864 | 54036930 | 54036864 | ID=MsG0880045088.01.T01:exon:23279;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54040469 | 54040557 | 54040469 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54040096 | 54040281 | 54040096 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54040013 | 54040040 | 54040013 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54039790 | 54039867 | 54039790 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54039626 | 54039694 | 54039626 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54039108 | 54039530 | 54039108 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54038645 | 54038875 | 54038645 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54038377 | 54038559 | 54038377 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54037555 | 54037613 | 54037555 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Chr8 | CDS | 54036864 | 54036930 | 54036864 | ID=MsG0880045088.01.T01:cds;Parent=MsG0880045088.01.T01 |
Gene Sequence |
Protein sequence |