AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045340.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045340.01.T01 MTR_8g069935 77.200 500 72 6 1 495 1 463 0.0 581
MsG0880045340.01.T01 MTR_8g067650 51.901 526 214 7 1 494 1 519 6.83e-144 423
MsG0880045340.01.T01 MTR_8g067635 51.724 522 209 7 1 480 1 521 1.77e-142 420
MsG0880045340.01.T01 MTR_6g053200 44.444 567 212 11 1 495 1 536 6.12e-110 337
MsG0880045340.01.T01 MTR_2g024380 38.710 434 134 9 161 495 70 470 1.72e-76 248
MsG0880045340.01.T01 MTR_2g024380 49.239 197 64 3 1 164 1 194 1.23e-36 141
MsG0880045340.01.T01 MTR_7g105000 51.117 358 156 5 1 357 1 340 3.85e-67 220
MsG0880045340.01.T01 MTR_2g024350 44.934 227 64 2 330 495 1 227 6.98e-55 184
MsG0880045340.01.T01 MTR_2g033110 53.005 183 69 4 1 180 1 169 1.06e-33 126
MsG0880045340.01.T01 MTR_7g104980 58.000 100 42 0 358 457 18 117 4.92e-30 117
MsG0880045340.01.T01 MTR_1g099600 53.535 99 44 2 314 412 163 259 4.42e-29 117
MsG0880045340.01.T01 MTR_8g028565 46.939 98 49 2 314 411 134 228 4.49e-24 103
MsG0880045340.01.T01 MTR_7g079040 47.917 96 49 1 316 411 133 227 7.83e-24 102
MsG0880045340.01.T01 MTR_2g032030 46.296 108 46 3 317 414 238 343 6.08e-22 98.6
MsG0880045340.01.T01 MTR_2g032030 45.133 113 50 3 317 419 238 348 1.66e-21 97.8
MsG0880045340.01.T01 MTR_8g098945 54.167 72 32 1 338 409 130 200 3.11e-20 90.9
MsG0880045340.01.T01 MTR_4g094908 52.941 68 32 0 338 405 267 334 6.06e-20 91.3
MsG0880045340.01.T01 MTR_5g016610 52.941 68 32 0 338 405 200 267 1.20e-19 89.4
MsG0880045340.01.T01 MTR_4g127040 58.209 67 27 1 333 399 242 307 2.43e-19 89.4
MsG0880045340.01.T01 MTR_8g087000 54.688 64 29 0 335 398 75 138 3.55e-19 87.4
MsG0880045340.01.T01 MTR_8g087000 54.688 64 29 0 335 398 74 137 4.73e-19 87.0
MsG0880045340.01.T01 MTR_2g083870 57.576 66 28 0 332 397 75 140 4.83e-19 87.4
MsG0880045340.01.T01 MTR_7g109600 49.367 79 40 0 338 416 54 132 1.07e-18 86.3
MsG0880045340.01.T01 MTR_1g070455 59.322 59 24 0 338 396 294 352 2.43e-18 87.0
MsG0880045340.01.T01 MTR_3g108960 42.105 95 54 1 309 402 285 379 3.91e-18 86.7
MsG0880045340.01.T01 MTR_2g016770 55.556 63 28 0 335 397 25 87 6.12e-18 82.8
MsG0880045340.01.T01 MTR_2g016770 55.556 63 28 0 335 397 33 95 6.68e-18 82.8
MsG0880045340.01.T01 MTR_1g009613 49.275 69 35 0 338 406 263 331 6.74e-18 85.5
MsG0880045340.01.T01 MTR_7g011820 44.578 83 44 2 337 419 410 490 7.32e-16 80.5
MsG0880045340.01.T01 MTR_7g011820 50.725 69 32 2 333 401 224 290 7.46e-16 80.5
MsG0880045340.01.T01 MTR_7g100510 56.923 65 26 2 333 397 185 247 8.92e-16 79.7
MsG0880045340.01.T01 MTR_7g100510 43.564 101 42 4 314 400 324 423 9.94e-16 79.7
MsG0880045340.01.T01 MTR_0117s0040 52.459 61 29 0 338 398 75 135 1.06e-15 77.0
MsG0880045340.01.T01 MTR_7g071120 52.439 82 34 3 320 401 152 228 2.34e-15 79.0
MsG0880045340.01.T01 MTR_7g071120 44.444 63 34 1 337 399 324 385 1.46e-11 67.0
MsG0880045340.01.T01 MTR_3g009470 50.685 73 34 2 335 407 278 348 2.82e-15 79.0
MsG0880045340.01.T01 MTR_3g009470 44.928 69 37 1 337 405 495 562 5.74e-14 75.1
MsG0880045340.01.T01 MTR_7g080020 40.000 105 48 3 337 441 493 582 3.52e-15 79.0
MsG0880045340.01.T01 MTR_7g080020 45.122 82 43 2 327 408 270 349 1.51e-14 77.0
MsG0880045340.01.T01 MTR_3g009470 50.685 73 34 2 335 407 278 348 4.04e-15 78.2
MsG0880045340.01.T01 MTR_4g082580 45.000 80 43 1 337 416 278 356 6.23e-15 77.0
MsG0880045340.01.T01 MTR_4g082580 42.647 68 38 1 330 397 138 204 2.76e-11 65.5
MsG0880045340.01.T01 MTR_5g042920 47.761 67 34 1 337 403 320 385 7.31e-15 77.0
MsG0880045340.01.T01 MTR_5g042920 36.691 139 74 6 333 468 147 274 2.66e-14 75.1
MsG0880045340.01.T01 MTR_1g086790 45.714 70 37 1 337 406 158 226 1.09e-14 75.5
MsG0880045340.01.T01 MTR_8g099350 42.529 87 44 2 312 392 103 189 2.34e-14 74.7
MsG0880045340.01.T01 MTR_7g109800 39.583 96 56 2 310 405 119 212 2.44e-14 73.9
MsG0880045340.01.T01 MTR_4g013260 53.623 69 30 2 330 397 176 243 4.65e-14 74.7
MsG0880045340.01.T01 MTR_4g013260 45.902 61 32 1 337 397 336 395 6.50e-13 71.2
MsG0880045340.01.T01 MTR_5g091390 51.613 62 29 1 337 398 157 217 4.96e-14 73.2
MsG0880045340.01.T01 MTR_4g094588 50.820 61 29 1 337 397 178 237 6.61e-14 73.2
MsG0880045340.01.T01 MTR_4g130900 37.037 108 55 3 302 397 312 418 7.51e-14 74.3
MsG0880045340.01.T01 MTR_7g080000 49.206 63 31 1 337 399 432 493 1.06e-13 73.9
MsG0880045340.01.T01 MTR_7g080000 39.535 86 50 2 327 412 224 307 2.52e-12 69.7
MsG0880045340.01.T01 MTR_3g031220 51.515 66 30 2 336 401 197 260 1.58e-13 72.4
MsG0880045340.01.T01 MTR_3g031220 51.515 66 30 2 336 401 197 260 1.87e-13 72.8
MsG0880045340.01.T01 MTR_3g031220 45.161 62 33 1 337 398 365 425 1.30e-11 67.0
MsG0880045340.01.T01 MTR_3g056100 43.284 67 37 1 337 403 402 467 2.04e-13 73.2
MsG0880045340.01.T01 MTR_3g056100 50.000 68 32 2 330 397 236 301 4.58e-13 72.0
MsG0880045340.01.T01 MTR_3g095040 46.774 62 32 1 337 398 118 178 2.05e-13 69.7
MsG0880045340.01.T01 MTR_5g094430 43.284 67 37 1 337 403 364 429 2.07e-13 72.8
MsG0880045340.01.T01 MTR_5g094430 50.000 64 30 2 334 397 197 258 1.63e-12 70.1
MsG0880045340.01.T01 MTR_3g056100 43.284 67 37 1 337 403 415 480 2.25e-13 72.8
MsG0880045340.01.T01 MTR_3g056100 50.000 68 32 2 330 397 236 301 4.79e-13 72.0
MsG0880045340.01.T01 MTR_4g122530 40.000 70 41 1 337 406 208 276 3.04e-13 72.0
MsG0880045340.01.T01 MTR_3g056100 43.284 67 37 1 337 403 258 323 3.21e-13 72.0
MsG0880045340.01.T01 MTR_3g056100 50.000 68 32 2 330 397 92 157 7.09e-13 70.9
MsG0880045340.01.T01 MTR_3g056100 43.284 67 37 1 337 403 271 336 3.45e-13 72.0
MsG0880045340.01.T01 MTR_3g056100 50.000 68 32 2 330 397 92 157 7.27e-13 70.9
MsG0880045340.01.T01 MTR_5g094430 43.284 67 37 1 337 403 252 317 3.83e-13 71.6
MsG0880045340.01.T01 MTR_5g094430 50.000 64 30 2 334 397 85 146 2.36e-12 69.3
MsG0880045340.01.T01 MTR_5g094430 43.284 67 37 1 337 403 230 295 3.93e-13 71.6
MsG0880045340.01.T01 MTR_5g094430 50.000 64 30 2 334 397 63 124 2.81e-12 68.9
MsG0880045340.01.T01 MTR_2g033820 46.154 65 34 1 337 401 203 266 5.09e-13 70.9
MsG0880045340.01.T01 MTR_8g092010 45.455 66 35 1 332 397 103 167 6.21e-13 67.8
MsG0880045340.01.T01 MTR_5g074400 54.839 62 26 2 336 397 242 301 6.32e-13 71.6
MsG0880045340.01.T01 MTR_5g074400 46.032 63 33 1 337 399 420 481 6.67e-13 71.2
MsG0880045340.01.T01 MTR_2g045360 43.333 60 34 0 338 397 212 271 9.45e-13 70.5
MsG0880045340.01.T01 MTR_5g043880 41.379 87 49 2 308 394 96 180 1.09e-12 68.9
MsG0880045340.01.T01 MTR_3g106060 43.038 79 42 1 337 415 138 213 1.14e-12 68.9
MsG0880045340.01.T01 MTR_5g067680 50.000 60 28 1 335 392 200 259 1.15e-12 69.7
MsG0880045340.01.T01 MTR_1g077780 46.269 67 35 1 337 403 62 127 1.36e-12 65.9
MsG0880045340.01.T01 MTR_4g052030 52.727 55 14 1 340 394 8 50 1.40e-12 62.8
MsG0880045340.01.T01 MTR_7g062220 50.000 62 24 2 336 394 123 180 1.82e-12 68.6
MsG0880045340.01.T01 MTR_3g053330 34.831 89 46 1 309 397 235 311 2.05e-12 69.7
MsG0880045340.01.T01 MTR_4g007060 42.308 78 44 1 337 413 128 205 2.07e-12 68.2
MsG0880045340.01.T01 MTR_3g090860 38.372 86 44 3 315 392 106 190 2.08e-12 68.9
MsG0880045340.01.T01 MTR_4g007060 42.308 78 44 1 337 413 162 239 2.43e-12 68.2
MsG0880045340.01.T01 MTR_4g132430 31.304 115 64 3 285 397 86 187 9.17e-12 67.0
MsG0880045340.01.T01 MTR_2g105060 43.548 62 35 0 337 398 94 155 9.55e-12 65.5
MsG0880045340.01.T01 MTR_4g132430 31.304 115 64 3 285 397 220 321 1.73e-11 66.6
MsG0880045340.01.T01 MTR_2g105060 43.548 62 35 0 337 398 169 230 2.01e-11 65.5
MsG0880045340.01.T01 MTR_7g079010 43.548 62 34 1 333 394 137 197 3.12e-11 63.5
MsG0880045340.01.T01 MTR_7g110720 41.667 60 35 0 338 397 217 276 3.35e-11 65.5
MsG0880045340.01.T01 MTR_7g110720 41.667 60 35 0 338 397 190 249 3.37e-11 65.5
MsG0880045340.01.T01 MTR_8g007270 35.849 106 63 4 299 403 117 218 4.40e-11 63.2
MsG0880045340.01.T01 MTR_2g088000 33.645 107 61 3 338 441 350 449 4.60e-11 65.5
MsG0880045340.01.T01 MTR_2g023930 43.333 60 34 0 338 397 306 365 7.96e-11 64.7
MsG0880045340.01.T01 MTR_6g086555 38.462 78 45 3 323 399 193 268 9.67e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045340.01.T01 AT5G52830 53.535 99 44 2 314 412 143 239 3.79e-28 115
MsG0880045340.01.T01 AT4G01250 36.913 149 83 5 265 411 62 201 5.02e-25 105
MsG0880045340.01.T01 AT4G23550 47.872 94 48 1 321 414 124 216 2.62e-22 97.8
MsG0880045340.01.T01 AT5G45050 52.688 93 42 2 314 406 1019 1109 5.81e-22 100
MsG0880045340.01.T01 AT5G45050 52.688 93 42 2 314 406 1158 1248 6.91e-22 100
MsG0880045340.01.T01 AT5G45050 52.688 93 42 2 314 406 1130 1220 8.58e-22 100
MsG0880045340.01.T01 AT2G34830 57.971 69 28 1 338 406 225 292 2.52e-20 94.0
MsG0880045340.01.T01 AT2G34830 57.971 69 28 1 338 406 216 283 2.63e-20 93.6
MsG0880045340.01.T01 AT1G30650 57.971 69 28 1 338 406 218 285 2.64e-20 93.6
MsG0880045340.01.T01 AT4G31550 53.846 65 30 0 338 402 247 311 8.34e-20 90.9
MsG0880045340.01.T01 AT4G31550 53.846 65 30 0 338 402 246 310 8.63e-20 90.9
MsG0880045340.01.T01 AT2G23320 57.895 57 24 0 338 394 241 297 5.66e-19 88.2
MsG0880045340.01.T01 AT2G24570 50.769 65 32 0 338 402 244 308 9.02e-19 87.8
MsG0880045340.01.T01 AT5G28650 53.030 66 31 0 338 403 263 328 1.25e-18 87.4
MsG0880045340.01.T01 AT1G29280 45.161 93 48 1 308 397 42 134 1.78e-18 85.5
MsG0880045340.01.T01 AT3G04670 53.030 66 31 0 338 403 263 328 2.08e-18 86.7
MsG0880045340.01.T01 AT4G24240 50.000 84 37 2 315 394 256 338 2.41e-18 87.0
MsG0880045340.01.T01 AT3G58710 52.941 68 32 0 335 402 68 135 3.25e-18 85.1
MsG0880045340.01.T01 AT3G58710 52.941 68 32 0 335 402 69 136 3.30e-18 85.1
MsG0880045340.01.T01 AT3G01080 47.436 78 36 3 333 410 201 273 4.60e-17 82.8
MsG0880045340.01.T01 AT2G30590 55.932 59 26 0 338 396 314 372 1.42e-16 82.0
MsG0880045340.01.T01 AT3G01080 47.436 78 36 3 333 410 201 273 1.48e-16 82.4
MsG0880045340.01.T01 AT3G01080 49.180 61 30 1 337 397 344 403 1.03e-14 76.6
MsG0880045340.01.T01 AT3G01080 47.436 78 36 3 333 410 163 235 1.53e-16 82.0
MsG0880045340.01.T01 AT3G01080 49.180 61 30 1 337 397 306 365 1.35e-14 76.3
MsG0880045340.01.T01 AT2G47260 38.261 115 65 3 310 420 148 260 1.61e-15 78.2
MsG0880045340.01.T01 AT2G38470 51.250 80 35 3 318 397 167 242 1.77e-15 79.3
MsG0880045340.01.T01 AT2G38470 46.032 63 33 1 337 399 362 423 3.29e-13 72.4
MsG0880045340.01.T01 AT2G03340 49.254 67 33 1 337 403 415 480 2.09e-15 79.0
MsG0880045340.01.T01 AT2G03340 50.000 70 33 2 333 402 246 313 2.52e-14 75.9
MsG0880045340.01.T01 AT3G62340 41.667 84 47 2 337 420 118 199 3.25e-15 76.3
MsG0880045340.01.T01 AT2G21900 40.426 94 51 2 310 399 78 170 9.52e-15 73.6
MsG0880045340.01.T01 AT1G13960 41.837 98 47 4 318 410 205 297 1.47e-14 76.6
MsG0880045340.01.T01 AT1G13960 49.180 61 30 1 337 397 409 468 6.52e-14 74.3
MsG0880045340.01.T01 AT4G26440 47.297 74 37 2 335 408 176 247 1.99e-14 76.3
MsG0880045340.01.T01 AT4G26440 39.024 82 49 1 337 418 372 452 3.21e-12 69.3
MsG0880045340.01.T01 AT1G13960 48.718 78 35 3 333 410 72 144 2.73e-14 74.7
MsG0880045340.01.T01 AT1G13960 49.180 61 30 1 337 397 256 315 1.07e-13 72.8
MsG0880045340.01.T01 AT5G56270 52.174 69 31 2 335 403 271 337 2.78e-14 75.9
MsG0880045340.01.T01 AT5G56270 46.032 63 33 1 337 399 487 548 3.63e-13 72.4
MsG0880045340.01.T01 AT4G30935 35.780 109 57 3 301 397 283 390 3.66e-14 75.1
MsG0880045340.01.T01 AT1G64000 39.286 84 47 3 312 394 90 170 5.77e-14 70.9
MsG0880045340.01.T01 AT2G30250 51.667 60 28 1 338 397 329 387 5.87e-14 73.9
MsG0880045340.01.T01 AT2G30250 48.387 62 30 2 336 397 165 224 1.12e-11 67.0
MsG0880045340.01.T01 AT5G43290 56.897 58 24 1 337 394 114 170 7.48e-14 72.4
MsG0880045340.01.T01 AT5G07100 36.364 110 63 3 336 439 116 224 1.40e-13 72.0
MsG0880045340.01.T01 AT5G07100 42.029 69 39 1 337 405 234 301 7.34e-13 69.7
MsG0880045340.01.T01 AT5G41570 41.176 85 47 3 312 394 71 154 1.83e-13 69.3
MsG0880045340.01.T01 AT2G37260 39.286 84 47 2 314 394 323 405 3.03e-13 72.0
MsG0880045340.01.T01 AT2G37260 50.746 67 31 2 333 399 161 225 1.49e-12 69.7
MsG0880045340.01.T01 AT2G04880 50.000 60 29 1 338 397 308 366 3.30e-13 72.0
MsG0880045340.01.T01 AT2G04880 50.000 60 29 1 338 397 284 342 3.62e-13 72.0
MsG0880045340.01.T01 AT2G04880 39.583 96 53 3 337 432 111 201 8.06e-11 64.7
MsG0880045340.01.T01 AT1G80840 45.161 62 34 0 337 398 146 207 3.99e-13 70.5
MsG0880045340.01.T01 AT1G69310 40.909 88 50 2 308 395 119 204 4.28e-13 70.1
MsG0880045340.01.T01 AT1G69310 40.909 88 50 2 308 395 119 204 4.28e-13 70.1
MsG0880045340.01.T01 AT1G69310 40.909 88 50 2 308 395 119 204 4.28e-13 70.1
MsG0880045340.01.T01 AT2G40740 39.080 87 48 2 311 392 144 230 4.52e-13 70.1
MsG0880045340.01.T01 AT2G37260 39.286 84 47 2 314 394 243 325 5.06e-13 70.9
MsG0880045340.01.T01 AT2G37260 50.746 67 31 2 333 399 81 145 2.73e-12 68.6
MsG0880045340.01.T01 AT1G29860 44.928 69 37 1 337 405 136 203 5.39e-13 69.7
MsG0880045340.01.T01 AT2G40740 39.080 87 48 2 311 392 153 239 5.55e-13 70.1
MsG0880045340.01.T01 AT2G37260 39.286 84 47 2 314 394 241 323 5.66e-13 70.5
MsG0880045340.01.T01 AT2G37260 50.746 67 31 2 333 399 79 143 2.95e-12 68.6
MsG0880045340.01.T01 AT5G07100 36.364 110 63 3 336 439 23 131 6.18e-13 68.6
MsG0880045340.01.T01 AT5G07100 42.029 69 39 1 337 405 141 208 2.28e-12 67.0
MsG0880045340.01.T01 AT5G07100 36.364 110 63 3 336 439 23 131 6.18e-13 68.6
MsG0880045340.01.T01 AT5G07100 42.029 69 39 1 337 405 141 208 2.28e-12 67.0
MsG0880045340.01.T01 AT5G07100 36.364 110 63 3 336 439 23 131 6.18e-13 68.6
MsG0880045340.01.T01 AT5G07100 42.029 69 39 1 337 405 141 208 2.28e-12 67.0
MsG0880045340.01.T01 AT5G07100 36.364 110 63 3 336 439 23 131 6.18e-13 68.6
MsG0880045340.01.T01 AT5G07100 42.029 69 39 1 337 405 141 208 2.28e-12 67.0
MsG0880045340.01.T01 AT1G55600 48.485 66 32 2 332 397 303 366 6.97e-13 71.2
MsG0880045340.01.T01 AT5G26170 49.206 63 31 1 332 394 108 169 7.01e-13 67.4
MsG0880045340.01.T01 AT4G26640 40.385 104 55 5 336 436 170 269 7.84e-13 71.2
MsG0880045340.01.T01 AT4G26640 42.623 61 34 1 337 397 341 400 5.79e-12 68.2
MsG0880045340.01.T01 AT4G18170 42.308 78 43 2 317 394 153 228 8.42e-13 69.7
MsG0880045340.01.T01 AT4G26640 40.385 104 55 5 336 436 210 309 8.60e-13 71.2
MsG0880045340.01.T01 AT4G26640 42.623 61 34 1 337 397 381 440 5.99e-12 68.6
MsG0880045340.01.T01 AT4G26640 40.385 104 55 5 336 436 138 237 1.17e-12 70.5
MsG0880045340.01.T01 AT4G26640 42.623 61 34 1 337 397 309 368 7.64e-12 67.8
MsG0880045340.01.T01 AT4G26640 40.385 104 55 5 336 436 34 133 1.63e-12 69.3
MsG0880045340.01.T01 AT4G26640 42.623 61 34 1 337 397 205 264 7.00e-12 67.4
MsG0880045340.01.T01 AT4G26640 40.385 104 55 5 336 436 34 133 1.63e-12 69.3
MsG0880045340.01.T01 AT4G26640 42.623 61 34 1 337 397 205 264 7.00e-12 67.4
MsG0880045340.01.T01 AT4G26640 40.385 104 55 5 336 436 34 133 1.63e-12 69.3
MsG0880045340.01.T01 AT4G26640 42.623 61 34 1 337 397 205 264 7.00e-12 67.4
MsG0880045340.01.T01 AT4G26640 40.385 104 55 5 336 436 34 133 1.63e-12 69.3
MsG0880045340.01.T01 AT4G26640 42.623 61 34 1 337 397 205 264 7.00e-12 67.4
MsG0880045340.01.T01 AT5G49520 46.552 58 30 1 337 394 221 277 2.25e-12 69.3
MsG0880045340.01.T01 AT5G45260 48.387 62 30 1 338 397 1209 1270 2.52e-12 70.1
MsG0880045340.01.T01 AT5G46350 47.541 61 31 1 337 397 183 242 4.83e-12 67.4
MsG0880045340.01.T01 AT2G44745 35.714 98 61 2 298 394 105 201 7.89e-12 65.5
MsG0880045340.01.T01 AT4G12020 33.600 125 73 5 304 422 363 483 1.80e-11 67.4
MsG0880045340.01.T01 AT4G12020 33.600 125 73 5 304 422 430 550 2.02e-11 67.4
MsG0880045340.01.T01 AT4G12020 33.600 125 73 5 304 422 430 550 2.02e-11 67.4
MsG0880045340.01.T01 AT2G46400 42.045 88 46 3 310 392 74 161 2.13e-11 65.1
MsG0880045340.01.T01 AT4G12020 33.600 125 73 5 304 422 430 550 2.27e-11 67.0
MsG0880045340.01.T01 AT4G22070 42.105 57 33 0 338 394 298 354 3.33e-11 65.9
MsG0880045340.01.T01 AT4G22070 42.105 57 33 0 338 394 298 354 3.33e-11 65.9
MsG0880045340.01.T01 AT4G22070 42.105 57 33 0 338 394 298 354 3.33e-11 65.9
MsG0880045340.01.T01 AT4G22070 42.105 57 33 0 338 394 298 354 3.33e-11 65.9
MsG0880045340.01.T01 AT4G12020 38.824 85 45 3 318 397 444 526 3.98e-11 66.2
MsG0880045340.01.T01 AT4G12020 38.824 85 45 3 318 397 444 526 4.04e-11 66.2
MsG0880045340.01.T01 AT4G12020 36.036 111 61 5 318 422 444 550 4.77e-11 66.2
MsG0880045340.01.T01 AT4G12020 38.824 85 45 3 318 397 444 526 4.94e-11 66.2
MsG0880045340.01.T01 AT4G12020 38.824 85 45 3 318 397 444 526 5.49e-11 65.9
MsG0880045340.01.T01 AT4G12020 38.824 85 45 3 318 397 444 526 5.49e-11 65.9
MsG0880045340.01.T01 AT4G31800 38.961 77 45 1 337 413 111 185 5.61e-11 63.2
MsG0880045340.01.T01 AT4G04450 41.667 60 35 0 338 397 199 258 5.82e-11 65.1
MsG0880045340.01.T01 AT1G62300 42.105 57 33 0 338 394 313 369 9.10e-11 64.7
MsG0880045340.01.T01 AT4G04450 42.105 57 33 0 338 394 293 349 9.24e-11 64.7

Find 140 sgRNAs with CRISPR-Local

Find 213 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCGGCTTAAGTGGGGTAAT+TGG 0.193333 8:-57787716 None:intergenic
ACTACAAATGTAGAAGTTTC+TGG 0.203501 8:+57789651 MsG0880045340.01.T01:CDS
GGTAGTGATGGTTGGGATAC+TGG 0.266171 8:-57787810 None:intergenic
GGAAGGGATGGTGGTGCTTG+AGG 0.267804 8:-57787855 None:intergenic
TCGGCTTAAGTGGGGTAATT+GGG 0.268846 8:-57787715 None:intergenic
GAAGGGATGGTGGTGCTTGA+GGG 0.285161 8:-57787854 None:intergenic
TGGATGTGGAGACCCTTTAA+TGG 0.287579 8:-57788658 None:intergenic
TGGAGGTGGAGTTTCAAAAT+TGG 0.294278 8:-57787597 None:intergenic
TTGAGGGGATATGATGTTAT+TGG 0.296773 8:-57787636 None:intergenic
TGCGATTTCACTGCGGGCAT+GGG 0.316131 8:-57788302 None:intergenic
AAACTTGGAATCGCCTAATA+TGG 0.320459 8:+57789865 MsG0880045340.01.T01:CDS
TAGTCTTTGATGACTTGTTT+TGG 0.324581 8:-57789799 None:intergenic
TAGTGAAGATGGTGGTAGTG+GGG 0.325049 8:-57788096 None:intergenic
AGGGTGGCGAATGTGGTTGT+AGG 0.331360 8:-57788121 None:intergenic
CTCCAATGGACAATGATGAT+TGG 0.334060 8:+57787519 None:intergenic
CAAAATTTAAATCAAGAAAA+AGG 0.335426 8:+57788455 MsG0880045340.01.T01:CDS
GTAGTGATGGTAGGTATGAT+AGG 0.345611 8:-57788157 None:intergenic
GTAGTTGATTGCGCTTTCTC+AGG 0.345960 8:-57788375 None:intergenic
ACTTATGTTGTGACATATAA+AGG 0.361618 8:+57789722 MsG0880045340.01.T01:CDS
GGATATGATGTTATTGGTTG+TGG 0.366736 8:-57787630 None:intergenic
TTGCGATTTCACTGCGGGCA+TGG 0.375796 8:-57788303 None:intergenic
TACACTTCATTGTTACGGTT+TGG 0.377794 8:-57788268 None:intergenic
AGTTCTTACCGATACGTCTA+TGG 0.380944 8:+57789928 MsG0880045340.01.T01:CDS
ATGAAATCATTCGGCTTAAG+TGG 0.384871 8:-57787725 None:intergenic
AGGGATGGTGGTGCTTGAGG+GGG 0.385352 8:-57787852 None:intergenic
GGATGTGGAGACCCTTTAAT+GGG 0.385486 8:-57788657 None:intergenic
GTTGGGGTGGTAGTGATGGT+TGG 0.392907 8:-57787818 None:intergenic
GTTGTGGTGGTTAGAGTTGG+AGG 0.394427 8:-57787614 None:intergenic
GGTAGTGAAGATGGTGGTAG+TGG 0.395152 8:-57788098 None:intergenic
TTTGTTCGAGGTAGTAGAAA+TGG 0.396886 8:-57788397 None:intergenic
AAGGGATGGTGGTGCTTGAG+GGG 0.398824 8:-57787853 None:intergenic
AACGGCAACATAGCCATATT+AGG 0.400299 8:-57789878 None:intergenic
GGTATTGGTGGTGATGGTAT+TGG 0.403037 8:-57787903 None:intergenic
GGTATTGGTGGTAATGGTAT+TGG 0.403812 8:-57787888 None:intergenic
AAACATGACACCTATGTTAG+AGG 0.407154 8:+57789991 MsG0880045340.01.T01:CDS
AGGGGTTGTTGTGGAATTGA+TGG 0.409578 8:-57788355 None:intergenic
AGAGGTGGGGATAGTGGTGT+TGG 0.411378 8:-57788056 None:intergenic
TCCAATGGACAATGATGATT+GGG 0.413894 8:+57787520 None:intergenic
TTGGTTGTGGTGGTTAGAGT+TGG 0.415176 8:-57787617 None:intergenic
CGCTTTCTCAGGGGTTGTTG+TGG 0.415304 8:-57788364 None:intergenic
GTTGGGATACTGGTGATAGT+AGG 0.415858 8:-57787800 None:intergenic
TTGGGGTGGTAGTGATGGTT+GGG 0.421087 8:-57787817 None:intergenic
CTACAAATGTAGAAGTTTCT+GGG 0.423709 8:+57789652 MsG0880045340.01.T01:CDS
TAGAAGTTTCTGGGATTGTT+CGG 0.428728 8:+57789661 MsG0880045340.01.T01:CDS
GGGTGGCGAATGTGGTTGTA+GGG 0.432234 8:-57788120 None:intergenic
GATGGTAGAGGTGGGGATAG+TGG 0.437887 8:-57788062 None:intergenic
TCTAGCTCTATGAAATCATT+CGG 0.443519 8:-57787734 None:intergenic
GGTAATGTGGGAAGGGATGG+TGG 0.443946 8:-57787864 None:intergenic
GATAGTAGGGGTGGGGATAG+TGG 0.445675 8:-57787786 None:intergenic
AGTGGTTGGGGTGGTAGTGA+TGG 0.446309 8:-57787822 None:intergenic
ACTTGAGCCTCGTTGCTCTC+TGG 0.448771 8:-57789908 None:intergenic
ACGAGCCTTCAGAAGATTCA+TGG 0.450159 8:+57788610 MsG0880045340.01.T01:CDS
TATGTTAGAGGATCTCTTGA+TGG 0.450163 8:+57790003 MsG0880045340.01.T01:CDS
GGTGATGGTATTGGTGGTAA+TGG 0.451924 8:-57787894 None:intergenic
TTGGGATACTGGTGATAGTA+GGG 0.453252 8:-57787799 None:intergenic
GAGGTGGGGATAGTGGTGTT+GGG 0.454610 8:-57788055 None:intergenic
AAACATACACTTCATTGTTA+CGG 0.454894 8:-57788273 None:intergenic
GGGGTGGGGATAGTGGTTGT+TGG 0.455018 8:-57787779 None:intergenic
TAGTGATGGTAGGTATGATA+GGG 0.457142 8:-57788156 None:intergenic
TTAATCAGAACTCCGTTGTT+GGG 0.460189 8:+57789771 MsG0880045340.01.T01:CDS
TGGGGCTGAGTTATTCTCCT+TGG 0.469030 8:-57787696 None:intergenic
AGGGGTAGTGGTGGTGAGGG+TGG 0.470018 8:-57788137 None:intergenic
TCATCAAAGCATGGAGGTGT+AGG 0.470833 8:-57787662 None:intergenic
AGTGAAGATGGTGGTAGTGG+GGG 0.472105 8:-57788095 None:intergenic
GGTGGTGAGGGTGGCGAATG+TGG 0.473258 8:-57788128 None:intergenic
TTATGCATTGGCAAAGAAGC+TGG 0.473516 8:+57789824 MsG0880045340.01.T01:CDS
GTAGTGAAGATGGTGGTAGT+GGG 0.473726 8:-57788097 None:intergenic
GGTGGTAATGTGGGAAGGGA+TGG 0.475750 8:-57787867 None:intergenic
GAATGCACAATCAAAATTGT+TGG 0.476039 8:-57788326 None:intergenic
TGATAGGGGTAGTGGTGGTG+AGG 0.478349 8:-57788141 None:intergenic
TAGTTGATTGCGCTTTCTCA+GGG 0.481392 8:-57788374 None:intergenic
TTGCGCAAATGTCAGAAACT+TGG 0.482429 8:+57789850 MsG0880045340.01.T01:CDS
TATGATGTTATTGGTTGTGG+TGG 0.483931 8:-57787627 None:intergenic
TCTAACATAGGTGTCATGTT+TGG 0.484082 8:-57789989 None:intergenic
GTTGGTTGCGATTTCACTGC+GGG 0.484377 8:-57788308 None:intergenic
GTTGTTGTTCGATGAGTGTT+GGG 0.487764 8:-57787979 None:intergenic
GGTTGTAGGGGTAGTGAAGA+TGG 0.488717 8:-57788107 None:intergenic
TACTGGTGATAGTAGGGGTG+GGG 0.488721 8:-57787793 None:intergenic
GGTAGGAGTAGTGGTTGGGG+TGG 0.493221 8:-57787831 None:intergenic
AGTGATGGTATTGGTGGTGA+TGG 0.498280 8:-57787909 None:intergenic
GTTAATCAGAACTCCGTTGT+TGG 0.498948 8:+57789770 MsG0880045340.01.T01:CDS
ATAGAGCACCACTATTGATC+TGG 0.499970 8:-57790033 None:intergenic
GTGGTGGTTAGAGTTGGAGG+TGG 0.500554 8:-57787611 None:intergenic
TAATGGTATTGGTGGTAATG+TGG 0.503942 8:-57787877 None:intergenic
AATGGTATTGGTGGTAATGT+GGG 0.506523 8:-57787876 None:intergenic
GATACTGGTGATAGTAGGGG+TGG 0.507596 8:-57787795 None:intergenic
TTGCTCTCTGGCTGATCTAA+CGG 0.509856 8:-57789896 None:intergenic
GGTGGTAGGAGTAGCAAAAG+TGG 0.510553 8:-57787576 None:intergenic
ACGGAGTTCTGATTAACTGC+TGG 0.513492 8:-57789764 None:intergenic
TGTTGTTGTTCGATGAGTGT+TGG 0.514177 8:-57787980 None:intergenic
GTTGTTGTGGAATTGATGGA+TGG 0.514803 8:-57788351 None:intergenic
ATTGGTGGTAATGGTATTGG+TGG 0.516114 8:-57787885 None:intergenic
CGGCTTAAGTGGGGTAATTG+GGG 0.520319 8:-57787714 None:intergenic
GATAGGGGTAGTGGTGGTGA+GGG 0.522610 8:-57788140 None:intergenic
AGGTGGAGTTTCAAAATTGG+TGG 0.528008 8:-57787594 None:intergenic
GGTGTGAGCAGTGATGGTAG+AGG 0.528684 8:-57788074 None:intergenic
ATTGGTGGTGATGGTATTGG+TGG 0.531595 8:-57787900 None:intergenic
GTGAGCAGTGATGGTAGAGG+TGG 0.533809 8:-57788071 None:intergenic
TGTTGGGAAATTAGAAAAGG+TGG 0.536200 8:-57787963 None:intergenic
ATCAAGAGATCCTCTAACAT+AGG 0.542974 8:-57790001 None:intergenic
TGAGCAGTGATGGTAGAGGT+GGG 0.544379 8:-57788070 None:intergenic
ATTAGTCGTTGTAGTAGTGA+TGG 0.545537 8:-57788170 None:intergenic
GGTAGGTATGATAGGGGTAG+TGG 0.546289 8:-57788149 None:intergenic
GCGATTTCACTGCGGGCATG+GGG 0.547693 8:-57788301 None:intergenic
TGAAATCATTCGGCTTAAGT+GGG 0.547986 8:-57787724 None:intergenic
GACTTCAACCAGATCAATAG+TGG 0.548651 8:+57790025 MsG0880045340.01.T01:CDS
TCCCAATCATCATTGTCCAT+TGG 0.550956 8:-57787521 None:intergenic
CATGCCCATGAATCTTCTGA+AGG 0.555237 8:-57788615 None:intergenic
CATCAAAGCATGGAGGTGTA+GGG 0.555900 8:-57787661 None:intergenic
GAGTGTTGGGAAATTAGAAA+AGG 0.562639 8:-57787966 None:intergenic
ACTAGTGTTAGTGATGGTAT+TGG 0.562993 8:-57787918 None:intergenic
GGAGTTTCAAAATTGGTGGT+AGG 0.564205 8:-57787590 None:intergenic
GGTGGCGAATGTGGTTGTAG+GGG 0.565157 8:-57788119 None:intergenic
AGGTGGGGATAGTGGTGTTG+GGG 0.565500 8:-57788054 None:intergenic
CGAGCCTTCAGAAGATTCAT+GGG 0.566390 8:+57788611 MsG0880045340.01.T01:CDS
AGTGATGGTAGGTATGATAG+GGG 0.566864 8:-57788155 None:intergenic
CATGGCACACAAATGTCACT+TGG 0.574104 8:-57788578 None:intergenic
TTAAAGGGTCTCCACATCCA+AGG 0.584498 8:+57788661 MsG0880045340.01.T01:CDS
AAACTAAAATCATCAAAGCA+TGG 0.588328 8:-57787671 None:intergenic
TCAAAGACTAGATTATGCAT+TGG 0.588584 8:+57789812 MsG0880045340.01.T01:CDS
ATGAAAACTAGTGTTAGTGA+TGG 0.596957 8:-57787924 None:intergenic
AAGGCTCGTCTTCCCTCACA+TGG 0.597848 8:-57788596 None:intergenic
CACAACATAAGTGTTCTCAC+TGG 0.597849 8:-57789711 None:intergenic
CTTCAGAAGATTCATGGGCA+TGG 0.598976 8:+57788616 MsG0880045340.01.T01:CDS
ATACTGGTGATAGTAGGGGT+GGG 0.601151 8:-57787794 None:intergenic
AGTGTTAGTGATGGTATTGG+TGG 0.615093 8:-57787915 None:intergenic
TATTGGTGGTAATGTGGGAA+GGG 0.622832 8:-57787871 None:intergenic
GTATTGGTGGTAATGTGGGA+AGG 0.623030 8:-57787872 None:intergenic
GACATTTGTGTGCCATGTGA+GGG 0.624856 8:+57788584 MsG0880045340.01.T01:CDS
TGGGATACTGGTGATAGTAG+GGG 0.637481 8:-57787798 None:intergenic
GTCGTTGTAGTAGTGATGGT+AGG 0.641331 8:-57788166 None:intergenic
TGACATTTGTGTGCCATGTG+AGG 0.643817 8:+57788583 MsG0880045340.01.T01:CDS
AGGTATGATAGGGGTAGTGG+TGG 0.649146 8:-57788146 None:intergenic
GAAATCATTCGGCTTAAGTG+GGG 0.658767 8:-57787723 None:intergenic
AGTTGATTGCGCTTTCTCAG+GGG 0.662828 8:-57788373 None:intergenic
TGTAGGGGTAGTGAAGATGG+TGG 0.689397 8:-57788104 None:intergenic
GAGCAGTGATGGTAGAGGTG+GGG 0.706368 8:-57788069 None:intergenic
TGTTGGTTGCGATTTCACTG+CGG 0.712957 8:-57788309 None:intergenic
CTAAAATCATCAAAGCATGG+AGG 0.732238 8:-57787668 None:intergenic
AGATCAGCCAGAGAGCAACG+AGG 0.772309 8:+57789901 MsG0880045340.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATATAATAAATAAT+AGG - Chr8:57788494-57788513 None:intergenic 0.0%
!! AAATTTATTTATAGTGAAAT+TGG + Chr8:57789195-57789214 MsG0880045340.01.T01:intron 10.0%
!!! GGTATATTTTTTTAAAAAAA+AGG + Chr8:57789292-57789311 MsG0880045340.01.T01:intron 10.0%
!! CAAAATTTAAATCAAGAAAA+AGG + Chr8:57788455-57788474 MsG0880045340.01.T01:CDS 15.0%
!! TATCAAAATAAGGATTAAAA+TGG - Chr8:57789233-57789252 None:intergenic 15.0%
!!! ATGAAATGTATAATGATTTT+AGG - Chr8:57788536-57788555 None:intergenic 15.0%
!!! CTTTTTCTTGATTTAAATTT+TGG - Chr8:57788457-57788476 None:intergenic 15.0%
!!! GATTTAAATTTTGGTTTTTT+CGG - Chr8:57788448-57788467 None:intergenic 15.0%
!!! GATTTTATTCTATCAAAATA+AGG - Chr8:57789243-57789262 None:intergenic 15.0%
!!! GTTTTATCTATTAAAATAGT+AGG + Chr8:57789576-57789595 MsG0880045340.01.T01:intron 15.0%
!!! TTCACTATAAATAAATTTTG+CGG - Chr8:57789193-57789212 None:intergenic 15.0%
!! ATTAAAATAGTAGGATTTAG+CGG + Chr8:57789585-57789604 MsG0880045340.01.T01:intron 20.0%
!! TAAATAAAGTGAAAGATCTT+AGG - Chr8:57789424-57789443 None:intergenic 20.0%
!! TGTATACATTTATATGTGTA+TGG + Chr8:57789554-57789573 MsG0880045340.01.T01:intron 20.0%
!!! ATATCAATGAATGTTTTTGT+AGG + Chr8:57789624-57789643 MsG0880045340.01.T01:intron 20.0%
! AAAAGAGAGGAAATATTTGT+AGG + Chr8:57789324-57789343 MsG0880045340.01.T01:intron 25.0%
! AAACATACACTTCATTGTTA+CGG - Chr8:57788276-57788295 None:intergenic 25.0%
! AAACTAAAATCATCAAAGCA+TGG - Chr8:57787674-57787693 None:intergenic 25.0%
! AAAGAGAGGAAATATTTGTA+GGG + Chr8:57789325-57789344 MsG0880045340.01.T01:intron 25.0%
! ACTTATGTTGTGACATATAA+AGG + Chr8:57789722-57789741 MsG0880045340.01.T01:CDS 25.0%
! AGGATTAAAATGGATATTGA+AGG - Chr8:57789223-57789242 None:intergenic 25.0%
! ATGTAACAAAATTCTTCCAA+TGG - Chr8:57788815-57788834 None:intergenic 25.0%
! GGATTAAAATGGATATTGAA+GGG - Chr8:57789222-57789241 None:intergenic 25.0%
! TACATATTAGAGAGAAAAAG+TGG + Chr8:57789271-57789290 MsG0880045340.01.T01:intron 25.0%
! TTAACTACAATTCTTTCCAA+TGG - Chr8:57788893-57788912 None:intergenic 25.0%
!! AAAAATCTAGAATTTGTTCG+AGG - Chr8:57788412-57788431 None:intergenic 25.0%
!! CACTATTTAAAACTCTAGTT+GGG - Chr8:57788848-57788867 None:intergenic 25.0%
!! TCACTATTTAAAACTCTAGT+TGG - Chr8:57788849-57788868 None:intergenic 25.0%
!!! ATGTACTGTTAATTGCTTTT+TGG + Chr8:57789055-57789074 MsG0880045340.01.T01:intron 25.0%
!!! CTAGAGTTTTAAATAGTGAT+CGG + Chr8:57788850-57788869 MsG0880045340.01.T01:intron 25.0%
!!! TGATGATTTTAGTTTTACCA+AGG + Chr8:57787679-57787698 MsG0880045340.01.T01:CDS 25.0%
AAGGAAGAAAAAGAAAAGAG+AGG + Chr8:57789311-57789330 MsG0880045340.01.T01:intron 30.0%
ACAAAATTCTTCCAATGGTA+AGG - Chr8:57788810-57788829 None:intergenic 30.0%
ACAATTACACCTTTGATCTT+TGG + Chr8:57789145-57789164 MsG0880045340.01.T01:intron 30.0%
ACTACAAATGTAGAAGTTTC+TGG + Chr8:57789651-57789670 MsG0880045340.01.T01:CDS 30.0%
ATATGTTACTCAGTGTAAGA+CGG + Chr8:57789496-57789515 MsG0880045340.01.T01:intron 30.0%
ATGAAAACTAGTGTTAGTGA+TGG - Chr8:57787927-57787946 None:intergenic 30.0%
ATGGAGAAAAACCCATTAAA+GGG + Chr8:57788646-57788665 MsG0880045340.01.T01:CDS 30.0%
ATTGTGTTTCCTAAAAACAG+AGG - Chr8:57789130-57789149 None:intergenic 30.0%
CAAAAAATGTTACATCTGCA+TGG - Chr8:57789098-57789117 None:intergenic 30.0%
CGTTTAATGCATAAAAACCT+TGG - Chr8:57788681-57788700 None:intergenic 30.0%
CTACAAATGTAGAAGTTTCT+GGG + Chr8:57789652-57789671 MsG0880045340.01.T01:CDS 30.0%
GAATGCACAATCAAAATTGT+TGG - Chr8:57788329-57788348 None:intergenic 30.0%
GTTTACTGAGCTAGAAAAAA+TGG + Chr8:57788018-57788037 MsG0880045340.01.T01:CDS 30.0%
TACAATTCTTTCCAATGGTA+AGG - Chr8:57788888-57788907 None:intergenic 30.0%
TATGGAGAAAAACCCATTAA+AGG + Chr8:57788645-57788664 MsG0880045340.01.T01:CDS 30.0%
TCAAAGACTAGATTATGCAT+TGG + Chr8:57789812-57789831 MsG0880045340.01.T01:CDS 30.0%
TCTTACACTGAGTAACATAT+TGG - Chr8:57789496-57789515 None:intergenic 30.0%
TTGTGTTTCCTAAAAACAGA+GGG - Chr8:57789129-57789148 None:intergenic 30.0%
! CACTATTTAAAACTCTAGGT+GGG - Chr8:57788770-57788789 None:intergenic 30.0%
! CATGAGAGAGTTTTACATAA+AGG - Chr8:57789536-57789555 None:intergenic 30.0%
! TTACATAAAGGTATGCAATC+TGG - Chr8:57789524-57789543 None:intergenic 30.0%
!! AGAAAAGGTGGAATTTTGAT+TGG - Chr8:57787954-57787973 None:intergenic 30.0%
!! TCTAGCTCTATGAAATCATT+CGG - Chr8:57787737-57787756 None:intergenic 30.0%
!!! AGTCTTTGATGACTTGTTTT+GGG - Chr8:57789801-57789820 None:intergenic 30.0%
!!! AGTTTTAAATAGTGATCGGA+AGG + Chr8:57788854-57788873 MsG0880045340.01.T01:intron 30.0%
!!! TAGTCTTTGATGACTTGTTT+TGG - Chr8:57789802-57789821 None:intergenic 30.0%
AAACATGACACCTATGTTAG+AGG + Chr8:57789991-57790010 MsG0880045340.01.T01:CDS 35.0%
AAACTTGGAATCGCCTAATA+TGG + Chr8:57789865-57789884 MsG0880045340.01.T01:CDS 35.0%
ACTAGTGTTAGTGATGGTAT+TGG - Chr8:57787921-57787940 None:intergenic 35.0%
ATCAAGAGATCCTCTAACAT+AGG - Chr8:57790004-57790023 None:intergenic 35.0%
ATGAAATCATTCGGCTTAAG+TGG - Chr8:57787728-57787747 None:intergenic 35.0%
ATGCATAAAAACCTTGGATG+TGG - Chr8:57788675-57788694 None:intergenic 35.0%
ATTAGTCGTTGTAGTAGTGA+TGG - Chr8:57788173-57788192 None:intergenic 35.0%
CAAAAACTCCATAGACGTAT+CGG - Chr8:57789939-57789958 None:intergenic 35.0%
CATCAAAGACCAAAGATCAA+AGG - Chr8:57789157-57789176 None:intergenic 35.0%
CTAAAATCATCAAAGCATGG+AGG - Chr8:57787671-57787690 None:intergenic 35.0%
GTAGTTAAATGCAACATACG+TGG + Chr8:57788905-57788924 MsG0880045340.01.T01:intron 35.0%
TACACTTCATTGTTACGGTT+TGG - Chr8:57788271-57788290 None:intergenic 35.0%
TAGTGATGGTAGGTATGATA+GGG - Chr8:57788159-57788178 None:intergenic 35.0%
TATGTTAGAGGATCTCTTGA+TGG + Chr8:57790003-57790022 MsG0880045340.01.T01:CDS 35.0%
TCATGGGCATGGAAAAAATA+TGG + Chr8:57788627-57788646 MsG0880045340.01.T01:CDS 35.0%
TGAAATCATTCGGCTTAAGT+GGG - Chr8:57787727-57787746 None:intergenic 35.0%
TGTTGGGAAATTAGAAAAGG+TGG - Chr8:57787966-57787985 None:intergenic 35.0%
TTAATCAGAACTCCGTTGTT+GGG + Chr8:57789771-57789790 MsG0880045340.01.T01:CDS 35.0%
TTGAGGGGATATGATGTTAT+TGG - Chr8:57787639-57787658 None:intergenic 35.0%
TTTGTTCGAGGTAGTAGAAA+TGG - Chr8:57788400-57788419 None:intergenic 35.0%
! CCACTATTTAAAACTCTAGG+TGG - Chr8:57788771-57788790 None:intergenic 35.0%
! CGACCACTATTTAAAACTCT+AGG - Chr8:57788774-57788793 None:intergenic 35.0%
! GATACGTCTATGGAGTTTTT+GGG + Chr8:57789938-57789957 MsG0880045340.01.T01:CDS 35.0%
! GGATATGATGTTATTGGTTG+TGG - Chr8:57787633-57787652 None:intergenic 35.0%
! TATGATGTTATTGGTTGTGG+TGG - Chr8:57787630-57787649 None:intergenic 35.0%
! TCTAACATAGGTGTCATGTT+TGG - Chr8:57789992-57790011 None:intergenic 35.0%
!! AATGGTATTGGTGGTAATGT+GGG - Chr8:57787879-57787898 None:intergenic 35.0%
!! GAGTGTTGGGAAATTAGAAA+AGG - Chr8:57787969-57787988 None:intergenic 35.0%
!! TAATGGTATTGGTGGTAATG+TGG - Chr8:57787880-57787899 None:intergenic 35.0%
!! TAGAAGTTTCTGGGATTGTT+CGG + Chr8:57789661-57789680 MsG0880045340.01.T01:CDS 35.0%
!!! CCACCTAGAGTTTTAAATAG+TGG + Chr8:57788768-57788787 MsG0880045340.01.T01:intron 35.0%
!!! GGTTTTTTCGGATGTGTATT+TGG - Chr8:57788436-57788455 None:intergenic 35.0%
AACGGCAACATAGCCATATT+AGG - Chr8:57789881-57789900 None:intergenic 40.0%
AAGACCATGATCCTTACCAT+TGG + Chr8:57788796-57788815 MsG0880045340.01.T01:intron 40.0%
AGGTGGAGTTTCAAAATTGG+TGG - Chr8:57787597-57787616 None:intergenic 40.0%
AGTGATGGTAGGTATGATAG+GGG - Chr8:57788158-57788177 None:intergenic 40.0%
AGTTCTTACCGATACGTCTA+TGG + Chr8:57789928-57789947 MsG0880045340.01.T01:CDS 40.0%
CACAACATAAGTGTTCTCAC+TGG - Chr8:57789714-57789733 None:intergenic 40.0%
CTTTCCAATGGTAAGGATCA+TGG - Chr8:57788881-57788900 None:intergenic 40.0%
GAAATCATTCGGCTTAAGTG+GGG - Chr8:57787726-57787745 None:intergenic 40.0%
GACTTCAACCAGATCAATAG+TGG + Chr8:57790025-57790044 MsG0880045340.01.T01:CDS 40.0%
GTAGTGATGGTAGGTATGAT+AGG - Chr8:57788160-57788179 None:intergenic 40.0%
GTTAATCAGAACTCCGTTGT+TGG + Chr8:57789770-57789789 MsG0880045340.01.T01:CDS 40.0%
GTTGTTGTGGAATTGATGGA+TGG - Chr8:57788354-57788373 None:intergenic 40.0%
TAGTTGATTGCGCTTTCTCA+GGG - Chr8:57788377-57788396 None:intergenic 40.0%
TCTTCCAATGGTAAGGATCA+TGG - Chr8:57788803-57788822 None:intergenic 40.0%
TGGAGGTGGAGTTTCAAAAT+TGG - Chr8:57787600-57787619 None:intergenic 40.0%
TTGCGCAAATGTCAGAAACT+TGG + Chr8:57789850-57789869 MsG0880045340.01.T01:CDS 40.0%
TTGGGATACTGGTGATAGTA+GGG - Chr8:57787802-57787821 None:intergenic 40.0%
! AACATACGTGGTCTTAATCG+CGG + Chr8:57788917-57788936 MsG0880045340.01.T01:intron 40.0%
! AGTGTTAGTGATGGTATTGG+TGG - Chr8:57787918-57787937 None:intergenic 40.0%
! ATAGAGCACCACTATTGATC+TGG - Chr8:57790036-57790055 None:intergenic 40.0%
! CGATACGTCTATGGAGTTTT+TGG + Chr8:57789937-57789956 MsG0880045340.01.T01:CDS 40.0%
! GGAGTTTCAAAATTGGTGGT+AGG - Chr8:57787593-57787612 None:intergenic 40.0%
! GTTGTTGTTCGATGAGTGTT+GGG - Chr8:57787982-57788001 None:intergenic 40.0%
! TATTGGTGGTAATGTGGGAA+GGG - Chr8:57787874-57787893 None:intergenic 40.0%
! TGTTGTTGTTCGATGAGTGT+TGG - Chr8:57787983-57788002 None:intergenic 40.0%
! TTATGCATTGGCAAAGAAGC+TGG + Chr8:57789824-57789843 MsG0880045340.01.T01:CDS 40.0%
!! ATTGGTGGTAATGGTATTGG+TGG - Chr8:57787888-57787907 None:intergenic 40.0%
!! CGTTTAGTCCCTCTGTTTTT+AGG + Chr8:57789118-57789137 MsG0880045340.01.T01:intron 40.0%
!! GGTATTGGTGGTAATGGTAT+TGG - Chr8:57787891-57787910 None:intergenic 40.0%
!!! CTTTGATGACTTGTTTTGGG+AGG - Chr8:57789798-57789817 None:intergenic 40.0%
ACGAGCCTTCAGAAGATTCA+TGG + Chr8:57788610-57788629 MsG0880045340.01.T01:CDS 45.0%
AGGACCATGATCCTTACCAT+TGG + Chr8:57788874-57788893 MsG0880045340.01.T01:intron 45.0%
AGGGGTTGTTGTGGAATTGA+TGG - Chr8:57788358-57788377 None:intergenic 45.0%
AGTTGATTGCGCTTTCTCAG+GGG - Chr8:57788376-57788395 None:intergenic 45.0%
ATACTGGTGATAGTAGGGGT+GGG - Chr8:57787797-57787816 None:intergenic 45.0%
CATGCCCATGAATCTTCTGA+AGG - Chr8:57788618-57788637 None:intergenic 45.0%
CATGGCACACAAATGTCACT+TGG - Chr8:57788581-57788600 None:intergenic 45.0%
CGAGCCTTCAGAAGATTCAT+GGG + Chr8:57788611-57788630 MsG0880045340.01.T01:CDS 45.0%
CTTCAGAAGATTCATGGGCA+TGG + Chr8:57788616-57788635 MsG0880045340.01.T01:CDS 45.0%
GACATTTGTGTGCCATGTGA+GGG + Chr8:57788584-57788603 MsG0880045340.01.T01:CDS 45.0%
GGATGTGGAGACCCTTTAAT+GGG - Chr8:57788660-57788679 None:intergenic 45.0%
GTAGTTGATTGCGCTTTCTC+AGG - Chr8:57788378-57788397 None:intergenic 45.0%
GTCGTTGTAGTAGTGATGGT+AGG - Chr8:57788169-57788188 None:intergenic 45.0%
GTTGGGATACTGGTGATAGT+AGG - Chr8:57787803-57787822 None:intergenic 45.0%
TCGGCTTAAGTGGGGTAATT+GGG - Chr8:57787718-57787737 None:intergenic 45.0%
TGACATTTGTGTGCCATGTG+AGG + Chr8:57788583-57788602 MsG0880045340.01.T01:CDS 45.0%
TGGATGTGGAGACCCTTTAA+TGG - Chr8:57788661-57788680 None:intergenic 45.0%
TGGGATACTGGTGATAGTAG+GGG - Chr8:57787801-57787820 None:intergenic 45.0%
TTAAAGGGTCTCCACATCCA+AGG + Chr8:57788661-57788680 MsG0880045340.01.T01:CDS 45.0%
TTCGGCTTAAGTGGGGTAAT+TGG - Chr8:57787719-57787738 None:intergenic 45.0%
TTGCTCTCTGGCTGATCTAA+CGG - Chr8:57789899-57789918 None:intergenic 45.0%
TTGGTTGTGGTGGTTAGAGT+TGG - Chr8:57787620-57787639 None:intergenic 45.0%
! ACGGAGTTCTGATTAACTGC+TGG - Chr8:57789767-57789786 None:intergenic 45.0%
! CATCAAAGCATGGAGGTGTA+GGG - Chr8:57787664-57787683 None:intergenic 45.0%
! GTAGTGAAGATGGTGGTAGT+GGG - Chr8:57788100-57788119 None:intergenic 45.0%
! GTATTGGTGGTAATGTGGGA+AGG - Chr8:57787875-57787894 None:intergenic 45.0%
! GTGTCGCTCATTGCAAAGAA+TGG - Chr8:57788985-57789004 None:intergenic 45.0%
! TAGTGAAGATGGTGGTAGTG+GGG - Chr8:57788099-57788118 None:intergenic 45.0%
! TCATCAAAGCATGGAGGTGT+AGG - Chr8:57787665-57787684 None:intergenic 45.0%
! TGTTGGTTGCGATTTCACTG+CGG - Chr8:57788312-57788331 None:intergenic 45.0%
!! AGTGATGGTATTGGTGGTGA+TGG - Chr8:57787912-57787931 None:intergenic 45.0%
!! ATGGAGGTGTAGGGTTTTGA+GGG - Chr8:57787655-57787674 None:intergenic 45.0%
!! ATTGGTGGTGATGGTATTGG+TGG - Chr8:57787903-57787922 None:intergenic 45.0%
!! GGTATTGGTGGTGATGGTAT+TGG - Chr8:57787906-57787925 None:intergenic 45.0%
!! GGTGATGGTATTGGTGGTAA+TGG - Chr8:57787897-57787916 None:intergenic 45.0%
CGGCTTAAGTGGGGTAATTG+GGG - Chr8:57787717-57787736 None:intergenic 50.0%
CTCTAGGTGGGTGTGTGTTT+AGG - Chr8:57788758-57788777 None:intergenic 50.0%
GATACTGGTGATAGTAGGGG+TGG - Chr8:57787798-57787817 None:intergenic 50.0%
GGTAGGTATGATAGGGGTAG+TGG - Chr8:57788152-57788171 None:intergenic 50.0%
GGTAGTGATGGTTGGGATAC+TGG - Chr8:57787813-57787832 None:intergenic 50.0%
GGTGGTAGGAGTAGCAAAAG+TGG - Chr8:57787579-57787598 None:intergenic 50.0%
GGTTGTAGGGGTAGTGAAGA+TGG - Chr8:57788110-57788129 None:intergenic 50.0%
GTTGGTTGCGATTTCACTGC+GGG - Chr8:57788311-57788330 None:intergenic 50.0%
GTTGTGGTGGTTAGAGTTGG+AGG - Chr8:57787617-57787636 None:intergenic 50.0%
TACTGGTGATAGTAGGGGTG+GGG - Chr8:57787796-57787815 None:intergenic 50.0%
TGAGCAGTGATGGTAGAGGT+GGG - Chr8:57788073-57788092 None:intergenic 50.0%
TGGGGCTGAGTTATTCTCCT+TGG - Chr8:57787699-57787718 None:intergenic 50.0%
TGTAGGGGTAGTGAAGATGG+TGG - Chr8:57788107-57788126 None:intergenic 50.0%
! AGGTATGATAGGGGTAGTGG+TGG - Chr8:57788149-57788168 None:intergenic 50.0%
! GGTAGTGAAGATGGTGGTAG+TGG - Chr8:57788101-57788120 None:intergenic 50.0%
! TTGGGGTGGTAGTGATGGTT+GGG - Chr8:57787820-57787839 None:intergenic 50.0%
!! AGTGAAGATGGTGGTAGTGG+GGG - Chr8:57788098-57788117 None:intergenic 50.0%
!! CATGGAGGTGTAGGGTTTTG+AGG - Chr8:57787656-57787675 None:intergenic 50.0%
!!! GTTTTGGGAGGTCCCAACAA+CGG - Chr8:57789786-57789805 None:intergenic 50.0%
!!! TGGAGGTGTAGGGTTTTGAG+GGG - Chr8:57787654-57787673 None:intergenic 50.0%
AAGGCTCGTCTTCCCTCACA+TGG - Chr8:57788599-57788618 None:intergenic 55.0%
ACTTGAGCCTCGTTGCTCTC+TGG - Chr8:57789911-57789930 None:intergenic 55.0%
AGATCAGCCAGAGAGCAACG+AGG + Chr8:57789901-57789920 MsG0880045340.01.T01:CDS 55.0%
AGGGGGTAGGAGTAGTGGTT+GGG - Chr8:57787838-57787857 None:intergenic 55.0%
AGGGTGGCGAATGTGGTTGT+AGG - Chr8:57788124-57788143 None:intergenic 55.0%
CGCTTTCTCAGGGGTTGTTG+TGG - Chr8:57788367-57788386 None:intergenic 55.0%
GAGCAGTGATGGTAGAGGTG+GGG - Chr8:57788072-57788091 None:intergenic 55.0%
GATAGTAGGGGTGGGGATAG+TGG - Chr8:57787789-57787808 None:intergenic 55.0%
GATGGTAGAGGTGGGGATAG+TGG - Chr8:57788065-57788084 None:intergenic 55.0%
GGGTGGCGAATGTGGTTGTA+GGG - Chr8:57788123-57788142 None:intergenic 55.0%
GGTAATGTGGGAAGGGATGG+TGG - Chr8:57787867-57787886 None:intergenic 55.0%
GGTGGCGAATGTGGTTGTAG+GGG - Chr8:57788122-57788141 None:intergenic 55.0%
GGTGTGAGCAGTGATGGTAG+AGG - Chr8:57788077-57788096 None:intergenic 55.0%
GTGAGCAGTGATGGTAGAGG+TGG - Chr8:57788074-57788093 None:intergenic 55.0%
GTGGTGGTTAGAGTTGGAGG+TGG - Chr8:57787614-57787633 None:intergenic 55.0%
TGCGATTTCACTGCGGGCAT+GGG - Chr8:57788305-57788324 None:intergenic 55.0%
TTGCGATTTCACTGCGGGCA+TGG - Chr8:57788306-57788325 None:intergenic 55.0%
! AAGGGATGGTGGTGCTTGAG+GGG - Chr8:57787856-57787875 None:intergenic 55.0%
! AGAGGTGGGGATAGTGGTGT+TGG - Chr8:57788059-57788078 None:intergenic 55.0%
! AGGTGGGGATAGTGGTGTTG+GGG - Chr8:57788057-57788076 None:intergenic 55.0%
! AGTGGTTGGGGTGGTAGTGA+TGG - Chr8:57787825-57787844 None:intergenic 55.0%
! GAAGGGATGGTGGTGCTTGA+GGG - Chr8:57787857-57787876 None:intergenic 55.0%
! GAGGTGGGGATAGTGGTGTT+GGG - Chr8:57788058-57788077 None:intergenic 55.0%
! GATAGGGGTAGTGGTGGTGA+GGG - Chr8:57788143-57788162 None:intergenic 55.0%
! GGTGGTAATGTGGGAAGGGA+TGG - Chr8:57787870-57787889 None:intergenic 55.0%
! GTTGGGGTGGTAGTGATGGT+TGG - Chr8:57787821-57787840 None:intergenic 55.0%
! TGATAGGGGTAGTGGTGGTG+AGG - Chr8:57788144-57788163 None:intergenic 55.0%
GAGGGGGTAGGAGTAGTGGT+TGG - Chr8:57787839-57787858 None:intergenic 60.0%
GCGATTTCACTGCGGGCATG+GGG - Chr8:57788304-57788323 None:intergenic 60.0%
GCTTGAGGGGGTAGGAGTAG+TGG - Chr8:57787843-57787862 None:intergenic 60.0%
GGGGGTAGGAGTAGTGGTTG+GGG - Chr8:57787837-57787856 None:intergenic 60.0%
GGTAGGAGTAGTGGTTGGGG+TGG - Chr8:57787834-57787853 None:intergenic 60.0%
! AGGGATGGTGGTGCTTGAGG+GGG - Chr8:57787855-57787874 None:intergenic 60.0%
! AGTGGGGGTGTGAGCAGTGA+TGG - Chr8:57788083-57788102 None:intergenic 60.0%
! ATGGTGGTGCTTGAGGGGGT+AGG - Chr8:57787851-57787870 None:intergenic 60.0%
! GGAAGGGATGGTGGTGCTTG+AGG - Chr8:57787858-57787877 None:intergenic 60.0%
! GGGGTGGGGATAGTGGTTGT+TGG - Chr8:57787782-57787801 None:intergenic 60.0%
GGTGGTGAGGGTGGCGAATG+TGG - Chr8:57788131-57788150 None:intergenic 65.0%
! AGGGGTAGTGGTGGTGAGGG+TGG - Chr8:57788140-57788159 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr8 gene 57787524 57790063 57787524 ID=MsG0880045340.01;Name=MsG0880045340.01
Chr8 mRNA 57787524 57790063 57787524 ID=MsG0880045340.01.T01;Parent=MsG0880045340.01;Name=MsG0880045340.01.T01;_AED=0.01;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|495
Chr8 exon 57787524 57788476 57787524 ID=MsG0880045340.01.T01:exon:1415;Parent=MsG0880045340.01.T01
Chr8 exon 57788566 57788682 57788566 ID=MsG0880045340.01.T01:exon:1416;Parent=MsG0880045340.01.T01
Chr8 exon 57789646 57790063 57789646 ID=MsG0880045340.01.T01:exon:1417;Parent=MsG0880045340.01.T01
Chr8 CDS 57787524 57788476 57787524 ID=MsG0880045340.01.T01:cds;Parent=MsG0880045340.01.T01
Chr8 CDS 57788566 57788682 57788566 ID=MsG0880045340.01.T01:cds;Parent=MsG0880045340.01.T01
Chr8 CDS 57789646 57790063 57789646 ID=MsG0880045340.01.T01:cds;Parent=MsG0880045340.01.T01
Gene Sequence

>MsG0880045340.01.T01

ATGGACAATGATGATTGGGATCTCTTTTCTATTGTTCGTAGCTGCAAAGCTACCACTTTTGCTACTCCTACCACCAATTTTGAAACTCCACCTCCAACTCTAACCACCACAACCAATAACATCATATCCCCTCAAAACCCTACACCTCCATGCTTTGATGATTTTAGTTTTACCAAGGAGAATAACTCAGCCCCAATTACCCCACTTAAGCCGAATGATTTCATAGAGCTAGACAAATTGATAATCAGTTTCAATCCAACAACCACTATCCCCACCCCTACTATCACCAGTATCCCAACCATCACTACCACCCCAACCACTACTCCTACCCCCTCAAGCACCACCATCCCTTCCCACATTACCACCAATACCATTACCACCAATACCATCACCACCAATACCATCACTAACACTAGTTTTCATGATTCCAATCAAAATTCCACCTTTTCTAATTTCCCAACACTCATCGAACAACAACAACTGCAACTAAATGAGTTTACTGAGCTAGAAAAAATGGTACTTAAATTCTACCCCAACACCACTATCCCCACCTCTACCATCACTGCTCACACCCCCACTACCACCATCTTCACTACCCCTACAACCACATTCGCCACCCTCACCACCACTACCCCTATCATACCTACCATCACTACTACAACGACTAATACTAGTGTTTGTAAAACAAATCAATATCTTACAATTTCTGACTATCAAATACTCGTCGAACAACAACAGAATCAACCAAACCGTAACAATGAAGTGTATGTTTCTGAACCCCATGCCCGCAGTGAAATCGCAACCAACAATTTTGATTGTGCATTCAACCATCCATCAATTCCACAACAACCCCTGAGAAAGCGCAATCAACTACCATTTCTACTACCTCGAACAAATTCTAGATTTTTACCAAATACACATCCGAAAAAACCAAAATTTAAATCAAGAAAAAGAAAAAATAATAACCAAGTGACATTTGTGTGCCATGTGAGGGAAGACGAGCCTTCAGAAGATTCATGGGCATGGAAAAAATATGGAGAAAAACCCATTAAAGGGTCTCCACATCCAAGGAGCTACTACAAATGTAGAAGTTTCTGGGATTGTTCGGCAAAAAAACTAGTAGAGAGAAGCAAAACCAGTGAGAACACTTATGTTGTGACATATAAAGGAGAACACAATCATGAAAAACCAGCAGTTAATCAGAACTCCGTTGTTGGGACCTCCCAAAACAAGTCATCAAAGACTAGATTATGCATTGGCAAAGAAGCTGGATCTTGCGCAAATGTCAGAAACTTGGAATCGCCTAATATGGCTATGTTGCCGTTAGATCAGCCAGAGAGCAACGAGGCTCAAGTTCTTACCGATACGTCTATGGAGTTTTTGGGAAGCTCTGATGACGATGTCATTTTGATACCAAACATGACACCTATGTTAGAGGATCTCTTGATGGACTTCAACCAGATCAATAGTGGTGCTCTATTCCCTTAG
Protein sequence

>MsG0880045340.01.T01

MDNDDWDLFSIVRSCKATTFATPTTNFETPPPTLTTTTNNIISPQNPTPPCFDDFSFTKENNSAPITPLKPNDFIELDKLIISFNPTTTIPTPTITSIPTITTTPTTTPTPSSTTIPSHITTNTITTNTITTNTITNTSFHDSNQNSTFSNFPTLIEQQQLQLNEFTELEKMVLKFYPNTTIPTSTITAHTPTTTIFTTPTTTFATLTTTTPIIPTITTTTTNTSVCKTNQYLTISDYQILVEQQQNQPNRNNEVYVSEPHARSEIATNNFDCAFNHPSIPQQPLRKRNQLPFLLPRTNSRFLPNTHPKKPKFKSRKRKNNNQVTFVCHVREDEPSEDSWAWKKYGEKPIKGSPHPRSYYKCRSFWDCSAKKLVERSKTSENTYVVTYKGEHNHEKPAVNQNSVVGTSQNKSSKTRLCIGKEAGSCANVRNLESPNMAMLPLDQPESNEAQVLTDTSMEFLGSSDDDVILIPNMTPMLEDLLMDFNQINSGALFP*