AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880045659.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045659.01.T01 MTR_8g076110 70.856 374 9 5 23 359 1 311 4.95e-180 501
MsG0880045659.01.T01 MTR_5g021710 48.622 399 90 12 24 358 4 351 1.02e-98 296
MsG0880045659.01.T01 MTR_4g036030 42.994 314 102 8 38 324 54 317 4.35e-69 220
MsG0880045659.01.T01 MTR_4g101680 42.000 300 100 7 38 314 54 302 6.37e-62 202
MsG0880045659.01.T01 MTR_1g096430 34.805 385 135 10 24 343 3 336 1.74e-58 192
MsG0880045659.01.T01 MTR_5g012080 42.384 302 109 11 38 322 54 307 4.32e-57 189
MsG0880045659.01.T01 MTR_8g024480 34.835 333 130 9 38 327 62 350 8.78e-49 170
MsG0880045659.01.T01 MTR_2g062730 36.824 296 106 9 38 310 57 294 7.95e-46 160
MsG0880045659.01.T01 MTR_4g035590 53.103 145 27 1 38 182 55 158 5.82e-44 155
MsG0880045659.01.T01 MTR_3g435150 65.116 86 27 1 47 129 69 154 2.93e-33 125
MsG0880045659.01.T01 MTR_7g011130 66.265 83 25 1 38 120 66 145 3.03e-33 127
MsG0880045659.01.T01 MTR_6g012670 67.949 78 25 0 43 120 69 146 3.17e-33 126
MsG0880045659.01.T01 MTR_4g108760 62.791 86 29 1 47 129 70 155 4.88e-33 126
MsG0880045659.01.T01 MTR_2g064470 38.608 158 57 3 49 206 64 181 5.69e-32 122
MsG0880045659.01.T01 MTR_7g085260 66.667 78 22 1 47 120 70 147 1.21e-31 123
MsG0880045659.01.T01 MTR_6g032770 65.789 76 24 1 47 120 71 146 1.44e-31 122
MsG0880045659.01.T01 MTR_7g011120 68.919 74 23 0 49 122 63 136 1.75e-31 121
MsG0880045659.01.T01 MTR_6g084430 68.056 72 23 0 49 120 60 131 2.25e-31 121
MsG0880045659.01.T01 MTR_2g078700 61.176 85 28 2 38 120 70 151 7.99e-31 120
MsG0880045659.01.T01 MTR_3g116070 60.440 91 31 2 38 126 71 158 1.24e-30 119
MsG0880045659.01.T01 MTR_1g069805 38.554 166 55 4 49 212 65 185 1.91e-30 117
MsG0880045659.01.T01 MTR_3g070030 66.667 72 24 0 49 120 74 145 2.07e-30 119
MsG0880045659.01.T01 MTR_3g064580 36.420 162 60 2 49 204 63 187 2.35e-30 122
MsG0880045659.01.T01 MTR_4g081870 42.647 136 44 2 46 181 61 162 3.92e-30 116
MsG0880045659.01.T01 MTR_5g041940 39.873 158 60 4 47 203 56 179 5.03e-30 115
MsG0880045659.01.T01 MTR_2g064090 40.141 142 48 2 49 190 63 167 1.05e-29 117
MsG0880045659.01.T01 MTR_7g097090 62.651 83 28 2 48 128 64 145 1.89e-29 115
MsG0880045659.01.T01 MTR_1g008740 64.000 75 25 1 49 121 69 143 2.10e-29 116
MsG0880045659.01.T01 MTR_6g477900 62.667 75 28 0 49 123 63 137 2.16e-29 114
MsG0880045659.01.T01 MTR_1g008740 64.000 75 25 1 49 121 83 157 2.55e-29 116
MsG0880045659.01.T01 MTR_3g109340 58.442 77 30 1 47 121 75 151 2.26e-28 113
MsG0880045659.01.T01 MTR_3g109340 58.442 77 30 1 47 121 75 151 2.27e-28 114
MsG0880045659.01.T01 MTR_2g079990 40.714 140 71 2 47 185 69 197 3.41e-28 113
MsG0880045659.01.T01 MTR_5g076850 60.000 75 30 0 49 123 63 137 3.47e-28 116
MsG0880045659.01.T01 MTR_3g096920 38.667 150 81 4 42 185 55 199 1.19e-27 111
MsG0880045659.01.T01 MTR_3g096140 32.143 252 128 5 49 297 43 254 3.15e-27 110
MsG0880045659.01.T01 MTR_5g069030 55.172 87 37 1 49 133 82 168 4.15e-27 112
MsG0880045659.01.T01 MTR_3g096140 32.143 252 128 5 49 297 64 275 4.79e-27 110
MsG0880045659.01.T01 MTR_8g094580 38.129 139 51 3 47 185 6 109 6.66e-27 107
MsG0880045659.01.T01 MTR_3g096140 53.409 88 38 1 49 133 64 151 1.09e-26 107
MsG0880045659.01.T01 MTR_3g070040 68.750 64 20 0 57 120 68 131 1.22e-26 108
MsG0880045659.01.T01 MTR_8g094580 38.129 139 51 3 47 185 60 163 1.94e-26 107
MsG0880045659.01.T01 MTR_3g093050 54.023 87 38 1 49 133 79 165 2.23e-26 110
MsG0880045659.01.T01 MTR_3g096920 54.762 84 37 1 42 125 55 137 2.27e-26 107
MsG0880045659.01.T01 MTR_3g093050 54.023 87 38 1 49 133 79 165 2.37e-26 110
MsG0880045659.01.T01 MTR_6g011860 35.057 174 73 6 41 205 62 204 3.12e-26 108
MsG0880045659.01.T01 MTR_3g093040 51.724 87 40 1 49 133 165 251 3.83e-26 106
MsG0880045659.01.T01 MTR_8g467490 34.104 173 81 5 41 210 61 203 3.95e-26 108
MsG0880045659.01.T01 MTR_7g005280 44.348 115 51 2 15 127 44 147 4.60e-26 105
MsG0880045659.01.T01 MTR_1g097300 55.556 72 32 0 49 120 76 147 7.07e-26 108
MsG0880045659.01.T01 MTR_3g088110 56.962 79 33 1 47 125 60 137 1.14e-25 105
MsG0880045659.01.T01 MTR_8g063550 59.722 72 29 0 49 120 63 134 1.32e-25 105
MsG0880045659.01.T01 MTR_8g063550 59.722 72 29 0 49 120 63 134 1.65e-25 107
MsG0880045659.01.T01 MTR_8g063550 59.722 72 29 0 49 120 63 134 2.67e-25 106
MsG0880045659.01.T01 MTR_2g079990 58.904 73 30 0 47 119 69 141 3.14e-25 105
MsG0880045659.01.T01 MTR_5g040420 37.584 149 61 3 41 187 61 179 3.18e-25 105
MsG0880045659.01.T01 MTR_4g089135 39.568 139 67 3 47 183 68 191 6.15e-25 103
MsG0880045659.01.T01 MTR_8g059170 56.579 76 33 0 44 119 64 139 6.69e-25 103
MsG0880045659.01.T01 MTR_7g100990 60.000 75 28 1 47 119 64 138 7.28e-25 103
MsG0880045659.01.T01 MTR_7g085220 52.222 90 32 2 47 127 61 148 9.18e-25 103
MsG0880045659.01.T01 MTR_5g014300 61.538 78 23 2 49 119 63 140 9.32e-25 103
MsG0880045659.01.T01 MTR_2157s0010 59.211 76 28 1 47 119 61 136 1.31e-24 101
MsG0880045659.01.T01 MTR_2g080010 52.809 89 38 2 47 131 68 156 1.37e-24 103
MsG0880045659.01.T01 MTR_4g075980 51.613 93 40 2 47 136 68 158 2.49e-24 101
MsG0880045659.01.T01 MTR_1g090720 53.750 80 36 1 38 117 89 167 3.29e-24 103
MsG0880045659.01.T01 MTR_2g093810 58.667 75 29 1 47 119 67 141 4.91e-24 101
MsG0880045659.01.T01 MTR_0036s0150 57.746 71 30 0 49 119 63 133 1.58e-23 102
MsG0880045659.01.T01 MTR_8g093580 56.944 72 31 0 49 120 63 134 1.93e-23 101
MsG0880045659.01.T01 MTR_1g090723 49.425 87 42 1 49 133 66 152 3.13e-23 101
MsG0880045659.01.T01 MTR_4g098630 58.108 74 28 1 49 119 63 136 3.50e-23 98.6
MsG0880045659.01.T01 MTR_7g070140 49.425 87 41 2 42 126 13 98 5.52e-23 93.6
MsG0880045659.01.T01 MTR_8g099750 48.913 92 45 1 43 132 61 152 7.33e-23 95.9
MsG0880045659.01.T01 MTR_1g090723 51.220 82 38 1 49 128 66 147 2.88e-22 98.6
MsG0880045659.01.T01 MTR_1g090723 51.220 82 38 1 49 128 66 147 3.08e-22 98.6
MsG0880045659.01.T01 MTR_2g086880 50.685 73 36 0 45 117 70 142 4.34e-22 97.8
MsG0880045659.01.T01 MTR_2g086880 50.685 73 36 0 45 117 70 142 5.25e-22 97.4
MsG0880045659.01.T01 MTR_4g052620 44.037 109 56 3 17 124 37 141 2.95e-21 92.0
MsG0880045659.01.T01 MTR_4g134460 43.697 119 58 3 49 166 109 219 2.17e-20 92.0
MsG0880045659.01.T01 MTR_2g086690 47.573 103 49 4 17 118 37 135 2.65e-20 89.4
MsG0880045659.01.T01 MTR_3g098810 45.098 102 52 1 43 140 61 162 4.15e-20 87.0
MsG0880045659.01.T01 MTR_2g068880 43.564 101 53 1 49 145 78 178 9.14e-20 89.0
MsG0880045659.01.T01 MTR_2g068920 52.000 75 32 1 49 119 77 151 1.20e-19 88.2
MsG0880045659.01.T01 MTR_5g090970 29.412 238 126 8 47 271 70 278 4.32e-19 87.0
MsG0880045659.01.T01 MTR_5g090970 29.412 238 126 8 47 271 71 279 5.26e-19 86.7
MsG0880045659.01.T01 MTR_3g098810 50.000 84 38 1 43 122 61 144 1.76e-18 84.0
MsG0880045659.01.T01 MTR_7g105170 44.872 78 42 1 49 125 65 142 5.47e-17 80.1
MsG0880045659.01.T01 MTR_8g023840 44.048 84 44 2 40 121 60 142 1.96e-16 80.5
MsG0880045659.01.T01 MTR_8g023860 46.154 78 39 2 49 124 70 146 1.16e-15 78.2
MsG0880045659.01.T01 MTR_8g023900 41.573 89 48 3 39 125 242 328 5.12e-13 70.5
MsG0880045659.01.T01 MTR_8g023900 31.618 136 53 4 21 117 5 139 1.78e-11 65.5
MsG0880045659.01.T01 MTR_8g023930 45.679 81 40 3 39 117 73 151 7.88e-13 69.7
MsG0880045659.01.T01 MTR_4g094302 40.260 77 36 2 45 119 62 130 9.15e-12 63.2
MsG0880045659.01.T01 MTR_4g094302 40.260 77 36 2 45 119 62 130 1.38e-11 63.2
MsG0880045659.01.T01 MTR_7g070150 59.459 37 15 0 90 126 8 44 2.95e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880045659.01.T01 AT2G18060 43.765 409 110 12 24 359 4 365 5.17e-96 290
MsG0880045659.01.T01 AT2G18060 43.765 409 110 12 24 359 4 365 5.17e-96 290
MsG0880045659.01.T01 AT4G36160 51.667 300 78 8 38 315 57 311 1.50e-88 271
MsG0880045659.01.T01 AT4G36160 51.667 300 78 8 38 315 57 311 1.50e-88 271
MsG0880045659.01.T01 AT4G36160 51.667 300 78 8 38 315 61 315 1.71e-88 271
MsG0880045659.01.T01 AT2G18060 43.385 325 100 11 71 359 1 277 1.25e-71 224
MsG0880045659.01.T01 AT5G66300 46.690 287 91 8 38 315 59 292 2.77e-71 224
MsG0880045659.01.T01 AT1G12260 41.867 332 97 10 38 315 54 343 4.74e-63 206
MsG0880045659.01.T01 AT1G62700 40.123 324 101 8 38 315 54 330 8.88e-61 200
MsG0880045659.01.T01 AT1G62700 40.123 324 101 8 38 315 54 330 8.88e-61 200
MsG0880045659.01.T01 AT1G12260 42.561 289 117 5 38 322 54 297 5.10e-60 197
MsG0880045659.01.T01 AT5G62380 39.456 294 131 4 38 325 54 306 5.57e-60 197
MsG0880045659.01.T01 AT5G62380 39.456 294 131 4 38 325 54 306 5.57e-60 197
MsG0880045659.01.T01 AT1G71930 40.146 274 111 5 39 311 57 278 4.33e-55 184
MsG0880045659.01.T01 AT1G71930 40.146 274 111 5 39 311 57 278 4.33e-55 184
MsG0880045659.01.T01 AT2G46770 40.214 281 109 7 38 312 63 290 3.69e-50 172
MsG0880045659.01.T01 AT4G10350 54.861 144 27 2 38 181 9 114 2.15e-45 157
MsG0880045659.01.T01 AT1G32770 37.457 291 122 10 38 316 63 305 3.38e-45 159
MsG0880045659.01.T01 AT4G10350 54.483 145 28 2 38 182 56 162 8.30e-45 157
MsG0880045659.01.T01 AT1G79580 52.667 150 29 2 38 186 64 172 1.55e-44 157
MsG0880045659.01.T01 AT1G79580 52.667 150 29 2 38 186 64 172 1.55e-44 157
MsG0880045659.01.T01 AT1G79580 52.667 150 29 2 38 186 64 172 1.55e-44 157
MsG0880045659.01.T01 AT1G79580 52.667 150 29 2 38 186 64 172 1.55e-44 157
MsG0880045659.01.T01 AT1G79580 52.667 150 29 2 38 186 64 172 1.55e-44 157
MsG0880045659.01.T01 AT3G61910 35.636 275 120 5 38 312 58 275 2.82e-44 155
MsG0880045659.01.T01 AT1G33280 52.414 145 28 1 38 182 55 158 2.97e-44 155
MsG0880045659.01.T01 AT1G56010 41.509 159 53 5 49 206 8 127 2.80e-34 127
MsG0880045659.01.T01 AT3G18400 43.885 139 39 2 47 185 58 157 6.03e-34 127
MsG0880045659.01.T01 AT5G61430 63.953 86 28 1 47 129 6 91 8.34e-34 126
MsG0880045659.01.T01 AT1G56010 35.135 222 69 8 21 206 12 194 1.12e-33 127
MsG0880045659.01.T01 AT3G12977 57.778 90 35 1 31 120 5 91 1.12e-33 124
MsG0880045659.01.T01 AT5G61430 63.953 86 28 1 47 129 69 154 4.20e-33 126
MsG0880045659.01.T01 AT5G39610 63.953 86 28 1 47 129 73 158 5.00e-33 124
MsG0880045659.01.T01 AT5G07680 58.511 94 33 2 39 129 51 141 1.23e-32 124
MsG0880045659.01.T01 AT5G07680 58.511 94 33 2 39 129 65 155 1.55e-32 124
MsG0880045659.01.T01 AT3G12977 45.255 137 35 4 21 120 11 144 2.62e-32 122
MsG0880045659.01.T01 AT3G29035 68.919 74 23 0 47 120 77 150 4.78e-32 122
MsG0880045659.01.T01 AT5G53950 48.800 125 45 6 1 120 35 145 1.87e-30 119
MsG0880045659.01.T01 AT1G76420 68.421 76 22 1 47 120 75 150 2.32e-30 119
MsG0880045659.01.T01 AT2G24430 59.302 86 30 2 38 121 63 145 2.73e-30 118
MsG0880045659.01.T01 AT2G24430 59.302 86 30 2 38 121 63 145 2.73e-30 118
MsG0880045659.01.T01 AT4G28530 67.073 82 24 3 49 128 81 161 2.94e-30 119
MsG0880045659.01.T01 AT3G17730 58.025 81 34 0 49 129 63 143 8.74e-30 115
MsG0880045659.01.T01 AT1G65910 48.800 125 50 5 2 123 24 137 9.21e-30 120
MsG0880045659.01.T01 AT5G18270 59.524 84 30 2 38 120 68 148 1.17e-29 117
MsG0880045659.01.T01 AT5G18270 64.000 75 26 1 47 120 74 148 1.95e-29 116
MsG0880045659.01.T01 AT3G04060 31.418 261 118 9 41 293 67 274 2.96e-29 115
MsG0880045659.01.T01 AT5G17260 46.875 128 54 5 2 126 24 140 4.62e-29 117
MsG0880045659.01.T01 AT4G35580 56.322 87 36 1 49 133 66 152 5.67e-29 117
MsG0880045659.01.T01 AT4G35580 56.322 87 36 1 49 133 66 152 6.06e-29 117
MsG0880045659.01.T01 AT4G35580 56.322 87 36 1 49 133 66 152 6.14e-29 117
MsG0880045659.01.T01 AT3G03200 46.094 128 55 5 2 126 24 140 1.13e-28 116
MsG0880045659.01.T01 AT3G15170 61.176 85 28 3 38 120 67 148 1.32e-28 113
MsG0880045659.01.T01 AT5G46590 44.776 134 37 3 23 119 1 134 4.65e-28 111
MsG0880045659.01.T01 AT5G46590 44.776 134 37 3 23 119 1 134 6.49e-28 111
MsG0880045659.01.T01 AT1G69490 56.962 79 34 0 47 125 62 140 2.09e-27 109
MsG0880045659.01.T01 AT1G77450 58.228 79 32 1 47 125 63 140 2.42e-27 108
MsG0880045659.01.T01 AT1G33060 45.872 109 49 2 12 118 50 150 4.30e-27 112
MsG0880045659.01.T01 AT1G33060 45.872 109 49 2 12 118 50 150 4.65e-27 112
MsG0880045659.01.T01 AT5G63790 58.228 79 32 1 47 125 103 180 5.37e-27 108
MsG0880045659.01.T01 AT5G63790 58.228 79 32 1 47 125 113 190 5.78e-27 109
MsG0880045659.01.T01 AT5G39820 36.364 143 72 3 47 187 73 198 8.05e-27 109
MsG0880045659.01.T01 AT2G33480 53.846 78 36 0 42 119 3 80 4.63e-26 103
MsG0880045659.01.T01 AT5G08790 56.962 79 33 1 47 125 60 137 5.46e-26 105
MsG0880045659.01.T01 AT3G10480 61.111 72 28 0 48 119 83 154 5.48e-26 108
MsG0880045659.01.T01 AT3G10480 61.111 72 28 0 48 119 83 154 5.60e-26 108
MsG0880045659.01.T01 AT3G10500 60.563 71 28 0 49 119 66 136 6.94e-26 108
MsG0880045659.01.T01 AT1G54330 64.789 71 25 0 49 119 63 133 8.97e-26 105
MsG0880045659.01.T01 AT3G10480 61.111 72 28 0 48 119 116 187 1.06e-25 108
MsG0880045659.01.T01 AT1G01720 55.696 79 34 1 47 125 60 137 1.46e-25 104
MsG0880045659.01.T01 AT5G04410 59.155 71 29 0 49 119 66 136 1.59e-25 108
MsG0880045659.01.T01 AT1G61110 38.667 150 56 5 47 191 69 187 1.86e-25 105
MsG0880045659.01.T01 AT3G10490 59.722 72 29 0 48 119 83 154 2.60e-25 102
MsG0880045659.01.T01 AT4G17980 39.286 140 47 2 23 124 1 140 2.70e-25 103
MsG0880045659.01.T01 AT5G24590 61.972 71 26 1 49 118 70 140 2.91e-25 106
MsG0880045659.01.T01 AT2G33480 56.164 73 32 0 47 119 65 137 2.95e-25 103
MsG0880045659.01.T01 AT2G33480 56.164 73 32 0 47 119 65 137 2.98e-25 103
MsG0880045659.01.T01 AT4G17980 39.286 140 47 2 23 124 1 140 4.94e-25 103
MsG0880045659.01.T01 AT3G10490 33.161 193 89 6 48 239 83 236 5.37e-25 105
MsG0880045659.01.T01 AT1G34180 38.400 125 67 2 49 173 73 187 5.45e-25 105
MsG0880045659.01.T01 AT1G34180 38.400 125 67 2 49 173 85 199 5.50e-25 105
MsG0880045659.01.T01 AT4G27410 57.534 73 31 0 47 119 67 139 6.41e-25 103
MsG0880045659.01.T01 AT1G34190 31.980 197 98 6 48 225 72 251 8.12e-25 105
MsG0880045659.01.T01 AT1G34180 38.095 126 68 2 48 173 84 199 8.39e-25 105
MsG0880045659.01.T01 AT1G34180 38.095 126 68 2 48 173 72 187 9.40e-25 105
MsG0880045659.01.T01 AT4G27410 57.534 73 31 0 47 119 84 156 9.57e-25 103
MsG0880045659.01.T01 AT3G15500 57.534 73 31 0 47 119 67 139 1.06e-24 102
MsG0880045659.01.T01 AT3G15510 56.098 82 32 2 47 126 70 149 1.38e-24 103
MsG0880045659.01.T01 AT5G13180 59.494 79 29 2 43 119 61 138 1.51e-24 101
MsG0880045659.01.T01 AT1G52890 57.534 73 31 0 47 119 67 139 2.11e-24 102
MsG0880045659.01.T01 AT1G32510 50.000 90 36 2 49 131 63 150 6.12e-24 100
MsG0880045659.01.T01 AT3G49530 56.338 71 30 1 49 118 70 140 1.45e-23 101
MsG0880045659.01.T01 AT3G49530 56.338 71 30 1 49 118 70 140 1.90e-23 101
MsG0880045659.01.T01 AT3G04070 55.128 78 30 1 47 119 63 140 5.73e-23 98.6
MsG0880045659.01.T01 AT1G26870 59.722 72 27 1 49 118 71 142 6.19e-23 99.4
MsG0880045659.01.T01 AT3G04070 55.128 78 30 1 47 119 63 140 7.31e-23 98.6
MsG0880045659.01.T01 AT5G22290 52.703 74 35 0 49 122 77 150 9.28e-23 97.8
MsG0880045659.01.T01 AT2G27300 44.706 85 44 1 47 131 68 149 4.73e-22 95.9
MsG0880045659.01.T01 AT2G17040 51.220 82 34 2 41 119 56 134 6.30e-22 94.4
MsG0880045659.01.T01 AT2G43000 46.739 92 47 1 41 130 65 156 9.80e-22 94.0
MsG0880045659.01.T01 AT3G44290 52.174 69 33 0 49 117 70 138 1.36e-21 92.4
MsG0880045659.01.T01 AT5G64060 30.811 185 101 6 49 219 63 234 2.36e-21 94.4
MsG0880045659.01.T01 AT2G02450 55.556 72 31 1 49 119 106 177 3.22e-21 94.0
MsG0880045659.01.T01 AT1G32870 47.126 87 37 2 33 119 58 135 3.36e-21 95.1
MsG0880045659.01.T01 AT1G32870 47.126 87 37 2 33 119 58 135 3.46e-21 95.1
MsG0880045659.01.T01 AT3G44290 52.174 69 33 0 49 117 70 138 3.82e-21 93.2
MsG0880045659.01.T01 AT2G02450 55.556 72 31 1 49 119 106 177 3.86e-21 94.4
MsG0880045659.01.T01 AT1G32870 47.126 87 37 2 33 119 94 171 4.69e-21 94.7
MsG0880045659.01.T01 AT1G52880 37.931 145 56 4 47 187 70 184 9.50e-21 92.0
MsG0880045659.01.T01 AT5G09330 48.611 72 37 0 49 120 63 134 2.16e-20 92.8
MsG0880045659.01.T01 AT5G09330 48.611 72 37 0 49 120 63 134 2.16e-20 92.8
MsG0880045659.01.T01 AT5G09330 48.611 72 37 0 49 120 63 134 2.16e-20 92.8
MsG0880045659.01.T01 AT5G09330 48.611 72 37 0 49 120 63 134 2.16e-20 92.8
MsG0880045659.01.T01 AT5G09330 48.611 72 37 0 49 120 63 134 2.16e-20 92.8
MsG0880045659.01.T01 AT3G12910 35.172 145 65 2 47 188 75 193 2.56e-20 90.5
MsG0880045659.01.T01 AT3G44350 38.281 128 68 5 16 136 36 159 2.04e-18 84.0
MsG0880045659.01.T01 AT5G04395 48.780 82 39 1 49 127 96 177 2.79e-18 82.4
MsG0880045659.01.T01 AT3G44350 41.441 111 58 5 16 125 36 140 6.49e-18 80.5
MsG0880045659.01.T01 AT5G22380 41.176 102 55 4 17 117 38 135 1.65e-17 81.3
MsG0880045659.01.T01 AT2G43000 50.746 67 33 0 56 122 2 68 3.78e-17 79.3
MsG0880045659.01.T01 AT3G10490 60.377 53 21 0 67 119 2 54 3.79e-17 82.0
MsG0880045659.01.T01 AT3G10490 60.377 53 21 0 67 119 2 54 3.79e-17 82.0
MsG0880045659.01.T01 AT4G01540 41.558 77 42 1 46 119 60 136 5.16e-15 76.3
MsG0880045659.01.T01 AT4G01540 41.558 77 42 1 46 119 60 136 5.18e-15 76.6
MsG0880045659.01.T01 AT4G01540 41.558 77 42 1 46 119 60 136 5.40e-15 76.3
MsG0880045659.01.T01 AT4G01520 39.759 83 46 2 40 119 55 136 6.13e-15 75.1
MsG0880045659.01.T01 AT4G01540 40.964 83 45 2 40 119 55 136 7.36e-15 75.5
MsG0880045659.01.T01 AT5G22290 54.000 50 23 0 73 122 2 51 1.00e-13 70.5
MsG0880045659.01.T01 AT3G04420 44.118 68 38 0 50 117 63 130 1.78e-13 70.5
MsG0880045659.01.T01 AT3G04420 44.118 68 38 0 50 117 63 130 3.17e-13 70.5
MsG0880045659.01.T01 AT4G01550 43.836 73 38 1 50 119 63 135 3.43e-13 70.9
MsG0880045659.01.T01 AT4G28530 57.895 57 22 2 49 103 81 137 2.85e-12 67.4
MsG0880045659.01.T01 AT1G02230 47.887 71 31 3 50 117 63 130 3.09e-11 64.3
MsG0880045659.01.T01 AT1G02220 42.647 68 36 1 50 117 63 127 4.50e-11 64.3

Find 66 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAATAATGAATTTCAAAA+TGG 0.248762 8:-62267425 MsG0880045659.01.T01:CDS
TTGTTATGTTCTGATATTAT+TGG 0.276778 8:+62267443 None:intergenic
TAAATTGAGTGTTCCCTTGC+AGG 0.291208 8:-62267774 MsG0880045659.01.T01:CDS
GAGCTACAATGGCAGGGTTC+TGG 0.317074 8:-62269893 MsG0880045659.01.T01:CDS
TCAAAAGGAGTTTAGAGAAA+TGG 0.332210 8:-62267844 MsG0880045659.01.T01:intron
TCAACTCAACACATAATATA+TGG 0.354988 8:+62269687 None:intergenic
TATACAGAGAGATGTAGAAT+TGG 0.372773 8:-62269990 MsG0880045659.01.T01:CDS
GACTCCATCATAGAAATATA+TGG 0.383595 8:+62270642 None:intergenic
ATTGGATCATGCATGAATAT+AGG 0.391373 8:-62269764 MsG0880045659.01.T01:CDS
TCCCTTGCAGGAAGAAGGTT+GGG 0.394830 8:-62267762 MsG0880045659.01.T01:CDS
AAAGAGAGAAAGTGACTGAT+TGG 0.431747 8:-62267379 MsG0880045659.01.T01:CDS
CATGTGTCCCACCTGGATTT+CGG 0.432093 8:-62270620 MsG0880045659.01.T01:intron
GTTCCTACTTCAAAGTAGTA+AGG 0.437560 8:-62267279 MsG0880045659.01.T01:CDS
AAAGATAAGAAATATCCAAC+AGG 0.439866 8:-62269930 MsG0880045659.01.T01:CDS
AGTTGAGTCAAGAAGATCAT+AGG 0.449602 8:-62267328 MsG0880045659.01.T01:CDS
GAGGGATCTTGACAAGTTTG+TGG 0.454746 8:-62267357 MsG0880045659.01.T01:CDS
TATGAACGAACAAAACTGAT+TGG 0.456318 8:-62269843 MsG0880045659.01.T01:CDS
CATCCTTACTACTTTGAAGT+AGG 0.458330 8:+62267276 None:intergenic
ACGAATAGAGCTACAATGGC+AGG 0.459411 8:-62269900 MsG0880045659.01.T01:CDS
CTTCATGCATTCAGAACAAA+TGG 0.460408 8:-62267519 MsG0880045659.01.T01:CDS
AGTGTTCCCTTGCAGGAAGA+AGG 0.464909 8:-62267767 MsG0880045659.01.T01:CDS
TGTCTTAAGATGAGGTCAAT+GGG 0.475675 8:+62267626 None:intergenic
ATACACCGACTTATCTCTTC+CGG 0.477433 8:+62269863 None:intergenic
AATACCATATATTTCTATGA+TGG 0.480060 8:-62270646 MsG0880045659.01.T01:CDS
ATACAGAGAGATGTAGAATT+GGG 0.482735 8:-62269989 MsG0880045659.01.T01:CDS
CTATTCGTTCTCGTCCCTGT+TGG 0.488529 8:+62269915 None:intergenic
TACAAAGGAAGAGCACCTAA+TGG 0.488869 8:-62269798 MsG0880045659.01.T01:CDS
CTAATGGACAGAAAACTGAT+TGG 0.497399 8:-62269782 MsG0880045659.01.T01:CDS
GAGATGTAGAATTGGGAATG+AGG 0.500296 8:-62269982 MsG0880045659.01.T01:CDS
GCAGGGTTCTGGAAAGCAAC+CGG 0.508647 8:-62269882 MsG0880045659.01.T01:CDS
GTTGGGTGGAACCGAAATCC+AGG 0.510577 8:+62270609 None:intergenic
TTCCCTTGCAGGAAGAAGGT+TGG 0.510912 8:-62267763 MsG0880045659.01.T01:CDS
ACAAATGAAAGATGGGATCC+AGG 0.514083 8:-62267695 MsG0880045659.01.T01:CDS
ATGATGAAGAAAGTGTATAA+TGG 0.515289 8:-62270696 MsG0880045659.01.T01:CDS
TTGTCTTAAGATGAGGTCAA+TGG 0.515328 8:+62267625 None:intergenic
GAGAGAAAGTGACTGATTGG+AGG 0.524381 8:-62267376 MsG0880045659.01.T01:CDS
AACCCAACCTTCTTCCTGCA+AGG 0.524953 8:+62267760 None:intergenic
AATGGGGTCCACCCTTGAGA+TGG 0.540085 8:+62267643 None:intergenic
AGTTGAAAATGCACCTCCAC+AGG 0.544633 8:-62269733 MsG0880045659.01.T01:CDS
GGACTTTCTAGCTGAGGAAG+AGG 0.549801 8:+62267494 None:intergenic
AAACAAGTAGCACCATCTCA+AGG 0.557359 8:-62267655 MsG0880045659.01.T01:CDS
ACAAGGTCAGATTGTGACAT+TGG 0.564455 8:-62267221 MsG0880045659.01.T01:CDS
TGTTCATCATATAAGTGACC+TGG 0.567839 8:+62267677 None:intergenic
AAAGTCCCTCTTTAACAAAG+AGG 0.569473 8:-62267478 MsG0880045659.01.T01:CDS
ATGGAGTCATGTGTCCCACC+TGG 0.583453 8:-62270627 MsG0880045659.01.T01:CDS
GAAAGTGTATAATGGTGTGT+GGG 0.584985 8:-62270688 MsG0880045659.01.T01:CDS
AGAGAAAGTGACTGATTGGA+GGG 0.585369 8:-62267375 MsG0880045659.01.T01:CDS
GAACAAAACTGATTGGAATG+AGG 0.589039 8:-62269836 MsG0880045659.01.T01:CDS
ACCCAACCTTCTTCCTGCAA+GGG 0.597920 8:+62267761 None:intergenic
AAAGAGGGACTTTCTAGCTG+AGG 0.604723 8:+62267488 None:intergenic
AACAAGTAGCACCATCTCAA+GGG 0.618907 8:-62267654 MsG0880045659.01.T01:CDS
AGCAACCGGAAGAGATAAGT+CGG 0.630743 8:-62269868 MsG0880045659.01.T01:CDS
TCTGTGGTTGTCTTAAGATG+AGG 0.635609 8:+62267618 None:intergenic
TATATGTATATACTTGCCTG+TGG 0.638729 8:+62269717 None:intergenic
CGAATAGAGCTACAATGGCA+GGG 0.643373 8:-62269899 MsG0880045659.01.T01:CDS
GAGAACGAATAGAGCTACAA+TGG 0.650530 8:-62269904 MsG0880045659.01.T01:CDS
AGAAAGTGTATAATGGTGTG+TGG 0.651278 8:-62270689 MsG0880045659.01.T01:CDS
AAGTAGCACCATCTCAAGGG+TGG 0.666198 8:-62267651 MsG0880045659.01.T01:CDS
GGGTGGAACCGAAATCCAGG+TGG 0.677530 8:+62270612 None:intergenic
GTCTTAAGATGAGGTCAATG+GGG 0.688746 8:+62267627 None:intergenic
AAAGTGTATAATGGTGTGTG+GGG 0.689224 8:-62270687 MsG0880045659.01.T01:CDS
GGTGGAACCGAAATCCAGGT+GGG 0.699498 8:+62270613 None:intergenic
GGAATGAGGAGCAACATGAG+TGG 0.701564 8:-62269968 MsG0880045659.01.T01:CDS
ATGTATATACTTGCCTGTGG+AGG 0.709573 8:+62269720 None:intergenic
AAGATAAGAAATATCCAACA+GGG 0.735024 8:-62269929 MsG0880045659.01.T01:CDS
TCATCTTAAGACAACCACAG+AGG 0.769996 8:-62267616 MsG0880045659.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTTATTTTATAT+AGG + Chr8:62268952-62268971 None:intergenic 0.0%
!! AGAAAAAAATTTAATTCAAA+AGG - Chr8:62270036-62270055 MsG0880045659.01.T01:intron 10.0%
!! TATTTAATTAATTAATCAAG+GGG + Chr8:62268272-62268291 None:intergenic 10.0%
!!! AAAAAATTTTGAAATATTGA+CGG - Chr8:62267613-62267632 MsG0880045659.01.T01:CDS 10.0%
!!! AATTATCATAAGTTTTTTTT+TGG - Chr8:62269966-62269985 MsG0880045659.01.T01:CDS 10.0%
!!! CATTAAAAAAAATCTAATTT+TGG - Chr8:62269194-62269213 MsG0880045659.01.T01:intron 10.0%
!!! TAGTTTTTTACTTTTTTTTA+CGG - Chr8:62269052-62269071 MsG0880045659.01.T01:intron 10.0%
!!! TTGTTTAAAACTTTTTAAAT+TGG + Chr8:62269514-62269533 None:intergenic 10.0%
!! AACAATAATGAATTTCAAAA+TGG - Chr8:62270470-62270489 MsG0880045659.01.T01:intron 15.0%
!! ACACAATATATGTAAAAAAA+TGG + Chr8:62269024-62269043 None:intergenic 15.0%
!! ATTGTGTTAAATTTATCAAT+AGG - Chr8:62269555-62269574 MsG0880045659.01.T01:intron 15.0%
!! TAAGTCAAATAAAATACAAT+CGG + Chr8:62269306-62269325 None:intergenic 15.0%
!! TCTCTTAAATGTTAATTATT+TGG - Chr8:62268980-62268999 MsG0880045659.01.T01:intron 15.0%
!! TTTATTTAAAGGTGAATATT+CGG - Chr8:62269870-62269889 MsG0880045659.01.T01:CDS 15.0%
!!! AAAAAATGGTTTTTTTTTCT+AGG + Chr8:62269010-62269029 None:intergenic 15.0%
!!! AAAAGTATACATATATTGAT+AGG - Chr8:62267869-62267888 MsG0880045659.01.T01:intron 15.0%
!!! ACATCATTGTTTTATTTTTT+AGG - Chr8:62268718-62268737 MsG0880045659.01.T01:intron 15.0%
!!! ATTTTTATTCATTTTAAGGA+TGG - Chr8:62269249-62269268 MsG0880045659.01.T01:intron 15.0%
!!! GTGTTAATAACTTTATTTAA+CGG - Chr8:62269716-62269735 MsG0880045659.01.T01:CDS 15.0%
!!! TCAACTAAAATGTTTTATTA+TGG - Chr8:62268802-62268821 MsG0880045659.01.T01:intron 15.0%
!!! TTTTATGTTCTAGTAATTTT+TGG + Chr8:62270008-62270027 None:intergenic 15.0%
!! AAACTTTGCAAAAGTTAAAA+GGG - Chr8:62269369-62269388 MsG0880045659.01.T01:intron 20.0%
!! AAAGACAATAATTGATTAAG+TGG + Chr8:62269624-62269643 None:intergenic 20.0%
!! AATACTATAAAGTACAACTT+TGG - Chr8:62268514-62268533 MsG0880045659.01.T01:intron 20.0%
!! CAACAAATACATAATTAGTT+TGG + Chr8:62269676-62269695 None:intergenic 20.0%
!! GTAATATAAGTAATATACCT+TGG + Chr8:62267416-62267435 None:intergenic 20.0%
!! TATAGAAGTCTTGATTTAAA+GGG - Chr8:62268389-62268408 MsG0880045659.01.T01:intron 20.0%
!! TTACGAATATTGTTAATTAG+TGG + Chr8:62268544-62268563 None:intergenic 20.0%
!! TTATAGAAGTCTTGATTTAA+AGG - Chr8:62268388-62268407 MsG0880045659.01.T01:intron 20.0%
!! TTATTTAAAGGTGAATATTC+GGG - Chr8:62269871-62269890 MsG0880045659.01.T01:CDS 20.0%
!! TTGTTATGTTCTGATATTAT+TGG + Chr8:62270455-62270474 None:intergenic 20.0%
!! TTTAAACAAGAACACAAAAT+AGG + Chr8:62267852-62267871 None:intergenic 20.0%
!!! AATACCATATATTTCTATGA+TGG - Chr8:62267249-62267268 MsG0880045659.01.T01:CDS 20.0%
!!! ATCATCTTTCTTTTACTTTT+TGG - Chr8:62268669-62268688 MsG0880045659.01.T01:intron 20.0%
!!! CTAAAATGTTTTATTATGGA+TGG - Chr8:62268806-62268825 MsG0880045659.01.T01:intron 20.0%
!!! GGATTGTATTGTATTTTTAT+TGG - Chr8:62269073-62269092 MsG0880045659.01.T01:intron 20.0%
! AAAAAACCTTTACCCTTAAA+AGG + Chr8:62269155-62269174 None:intergenic 25.0%
! AAAGATAAGAAATATCCAAC+AGG - Chr8:62267965-62267984 MsG0880045659.01.T01:intron 25.0%
! AAATTCATTCGTTAGAGAAT+AGG + Chr8:62268917-62268936 None:intergenic 25.0%
! AACCCGAATTAATTAAATTC+GGG + Chr8:62269901-62269920 None:intergenic 25.0%
! AACCCGAATTTAATTAATTC+GGG - Chr8:62269896-62269915 MsG0880045659.01.T01:CDS 25.0%
! AACTTTGCAAAAGTTAAAAG+GGG - Chr8:62269370-62269389 MsG0880045659.01.T01:intron 25.0%
! AAGATAAGAAATATCCAACA+GGG - Chr8:62267966-62267985 MsG0880045659.01.T01:intron 25.0%
! AAGCAAAAACAAATGAAAGA+TGG - Chr8:62270192-62270211 MsG0880045659.01.T01:intron 25.0%
! AATCAGTTGATCTTGATTAA+TGG + Chr8:62268854-62268873 None:intergenic 25.0%
! ACATTTAAATATGGAGAAGT+GGG + Chr8:62269811-62269830 None:intergenic 25.0%
! AGCAAAAACAAATGAAAGAT+GGG - Chr8:62270193-62270212 MsG0880045659.01.T01:intron 25.0%
! CAACCCGAATTAATTAAATT+CGG + Chr8:62269902-62269921 None:intergenic 25.0%
! GAAACTTTGCAAAAGTTAAA+AGG - Chr8:62269368-62269387 MsG0880045659.01.T01:intron 25.0%
! GAACCCGAATTTAATTAATT+CGG - Chr8:62269895-62269914 MsG0880045659.01.T01:CDS 25.0%
! TCAAACTTGATTAGTAACTT+TGG - Chr8:62268237-62268256 MsG0880045659.01.T01:intron 25.0%
! TCAACTCAACACATAATATA+TGG + Chr8:62268211-62268230 None:intergenic 25.0%
! TTCGTAAATAATATTCACCA+AGG - Chr8:62268557-62268576 MsG0880045659.01.T01:intron 25.0%
!! ATGATGAAGAAAGTGTATAA+TGG - Chr8:62267199-62267218 MsG0880045659.01.T01:CDS 25.0%
!! TATTTTATGCGTTACTCTAT+AGG + Chr8:62267776-62267795 None:intergenic 25.0%
!! TCATTAGATGATCCTTTTAT+TGG - Chr8:62269280-62269299 MsG0880045659.01.T01:intron 25.0%
!! TGTTTGTACATGAAATTTTG+AGG + Chr8:62270311-62270330 None:intergenic 25.0%
!! TTGATCAACTCTATTGATTA+GGG - Chr8:62267802-62267821 MsG0880045659.01.T01:CDS 25.0%
!! TTTGATCAACTCTATTGATT+AGG - Chr8:62267801-62267820 MsG0880045659.01.T01:CDS 25.0%
!! TTTTATTGGAGTGACAAAAA+AGG - Chr8:62269087-62269106 MsG0880045659.01.T01:intron 25.0%
!!! ATCTTTCATTTGTTTTTGCT+TGG + Chr8:62270193-62270212 None:intergenic 25.0%
!!! ATGATGTTTTGAATGTGAAA+AGG + Chr8:62269420-62269439 None:intergenic 25.0%
!!! TAAGCTCATTTTTAACTACA+AGG - Chr8:62270657-62270676 MsG0880045659.01.T01:CDS 25.0%
AAATACAATCGGCCAATAAA+AGG + Chr8:62269295-62269314 None:intergenic 30.0%
ACTTTGCAAAAGTTAAAAGG+GGG - Chr8:62269371-62269390 MsG0880045659.01.T01:intron 30.0%
ATACAGAGAGATGTAGAATT+GGG - Chr8:62267906-62267925 MsG0880045659.01.T01:intron 30.0%
ATTGGATCATGCATGAATAT+AGG - Chr8:62268131-62268150 MsG0880045659.01.T01:intron 30.0%
CACATTTAAATATGGAGAAG+TGG + Chr8:62269812-62269831 None:intergenic 30.0%
CATTTAAATATGGAGAAGTG+GGG + Chr8:62269810-62269829 None:intergenic 30.0%
GAAGCTCACACATTTAAATA+TGG + Chr8:62269820-62269839 None:intergenic 30.0%
GACTCCATCATAGAAATATA+TGG + Chr8:62267256-62267275 None:intergenic 30.0%
TACGTTATAAACGAGTTTAG+AGG + Chr8:62268492-62268511 None:intergenic 30.0%
TATACAGAGAGATGTAGAAT+TGG - Chr8:62267905-62267924 MsG0880045659.01.T01:intron 30.0%
TATATGTATATACTTGCCTG+TGG + Chr8:62268181-62268200 None:intergenic 30.0%
TATGAACGAACAAAACTGAT+TGG - Chr8:62268052-62268071 MsG0880045659.01.T01:intron 30.0%
TATGTGTGTGTATATATGTG+TGG + Chr8:62269129-62269148 None:intergenic 30.0%
TCAAAAGGAGTTTAGAGAAA+TGG - Chr8:62270051-62270070 MsG0880045659.01.T01:intron 30.0%
TGCATAATATATGCAGAAGT+CGG - Chr8:62269771-62269790 MsG0880045659.01.T01:CDS 30.0%
! ACAAGGATGTTTCTATAAGT+TGG - Chr8:62268337-62268356 MsG0880045659.01.T01:intron 30.0%
! ACACACATATTGCCTTTTAA+GGG - Chr8:62269140-62269159 MsG0880045659.01.T01:intron 30.0%
! TACGTACAAACTTTTTGCTA+GGG - Chr8:62268580-62268599 MsG0880045659.01.T01:intron 30.0%
! TTGCAAAGTTTCAGTCTTTT+TGG + Chr8:62269360-62269379 None:intergenic 30.0%
! TTTTGCCTCTTTGTTAAAGA+GGG + Chr8:62270425-62270444 None:intergenic 30.0%
!! ATATTGCCTTTTAAGGGTAA+AGG - Chr8:62269146-62269165 MsG0880045659.01.T01:intron 30.0%
!! CTTGTTTTCTTGTCTGAAAA+AGG + Chr8:62268322-62268341 None:intergenic 30.0%
!!! CTTTTTCAGACAAGAAAACA+AGG - Chr8:62268320-62268339 MsG0880045659.01.T01:intron 30.0%
AAAGAGAGAAAGTGACTGAT+TGG - Chr8:62270516-62270535 MsG0880045659.01.T01:intron 35.0%
AAAGTCCCTCTTTAACAAAG+AGG - Chr8:62270417-62270436 MsG0880045659.01.T01:intron 35.0%
AAAGTGTATAATGGTGTGTG+GGG - Chr8:62267208-62267227 MsG0880045659.01.T01:CDS 35.0%
AACCATGTTCAAACTAGTGA+TGG - Chr8:62267478-62267497 MsG0880045659.01.T01:CDS 35.0%
AGTTGAGTCAAGAAGATCAT+AGG - Chr8:62270567-62270586 MsG0880045659.01.T01:intron 35.0%
CAAAAAGTTTGTACGTACCT+TGG + Chr8:62268577-62268596 None:intergenic 35.0%
CATAATATATGCAGAAGTCG+GGG - Chr8:62269773-62269792 MsG0880045659.01.T01:CDS 35.0%
CTTCATGCATTCAGAACAAA+TGG - Chr8:62270376-62270395 MsG0880045659.01.T01:intron 35.0%
GAAAAAGACACATCAAGAGA+AGG + Chr8:62268435-62268454 None:intergenic 35.0%
GAACAAAACTGATTGGAATG+AGG - Chr8:62268059-62268078 MsG0880045659.01.T01:intron 35.0%
GAGACTAAATTTAGAGACGA+AGG + Chr8:62269486-62269505 None:intergenic 35.0%
GCATAATATATGCAGAAGTC+GGG - Chr8:62269772-62269791 MsG0880045659.01.T01:CDS 35.0%
GTTCCTACTTCAAAGTAGTA+AGG - Chr8:62270616-62270635 MsG0880045659.01.T01:intron 35.0%
TGTCTTAAGATGAGGTCAAT+GGG + Chr8:62270272-62270291 None:intergenic 35.0%
TGTTCATCATATAAGTGACC+TGG + Chr8:62270221-62270240 None:intergenic 35.0%
TTGTCTTAAGATGAGGTCAA+TGG + Chr8:62270273-62270292 None:intergenic 35.0%
TTTGTTTAGTAGCCTAGTGA+CGG + Chr8:62269842-62269861 None:intergenic 35.0%
! AAGACACTCGTTTTCTACAA+AGG - Chr8:62268082-62268101 MsG0880045659.01.T01:intron 35.0%
! AGAAAGTGTATAATGGTGTG+TGG - Chr8:62267206-62267225 MsG0880045659.01.T01:CDS 35.0%
! CAATCAGTTTTCTGTCCATT+AGG + Chr8:62268115-62268134 None:intergenic 35.0%
! CACACACATATTGCCTTTTA+AGG - Chr8:62269139-62269158 MsG0880045659.01.T01:intron 35.0%
! CTAATGGACAGAAAACTGAT+TGG - Chr8:62268113-62268132 MsG0880045659.01.T01:intron 35.0%
! GAAAGTGTATAATGGTGTGT+GGG - Chr8:62267207-62267226 MsG0880045659.01.T01:CDS 35.0%
! GTACGTACAAACTTTTTGCT+AGG - Chr8:62268579-62268598 MsG0880045659.01.T01:intron 35.0%
! GTTTTGCCTCTTTGTTAAAG+AGG + Chr8:62270426-62270445 None:intergenic 35.0%
! TACCATCACTAGTTTGAACA+TGG + Chr8:62267483-62267502 None:intergenic 35.0%
! TATAAGTTGGAGAATGAGCA+TGG - Chr8:62268350-62268369 MsG0880045659.01.T01:intron 35.0%
!! CATCCTTACTACTTTGAAGT+AGG + Chr8:62270622-62270641 None:intergenic 35.0%
!!! AAGGGTAAAGGTTTTTTCTC+AGG - Chr8:62269158-62269177 MsG0880045659.01.T01:intron 35.0%
!!! AGTGACTTTTGACTTCTTTC+TGG + Chr8:62268624-62268643 None:intergenic 35.0%
AAACAAGTAGCACCATCTCA+AGG - Chr8:62270240-62270259 MsG0880045659.01.T01:intron 40.0%
AACAAGTAGCACCATCTCAA+GGG - Chr8:62270241-62270260 MsG0880045659.01.T01:intron 40.0%
AATATACCTTGGAGATCCCA+GGG + Chr8:62267405-62267424 None:intergenic 40.0%
ACAAATGAAAGATGGGATCC+AGG - Chr8:62270200-62270219 MsG0880045659.01.T01:intron 40.0%
ACAAGGTCAGATTGTGACAT+TGG - Chr8:62270674-62270693 MsG0880045659.01.T01:CDS 40.0%
AGAGAAAGTGACTGATTGGA+GGG - Chr8:62270520-62270539 MsG0880045659.01.T01:intron 40.0%
ATCTATACCGTATTGAACCC+TGG - Chr8:62267385-62267404 MsG0880045659.01.T01:CDS 40.0%
ATGTATATACTTGCCTGTGG+AGG + Chr8:62268178-62268197 None:intergenic 40.0%
GAGAACGAATAGAGCTACAA+TGG - Chr8:62267991-62268010 MsG0880045659.01.T01:intron 40.0%
GAGATGTAGAATTGGGAATG+AGG - Chr8:62267913-62267932 MsG0880045659.01.T01:intron 40.0%
GTCTTAAGATGAGGTCAATG+GGG + Chr8:62270271-62270290 None:intergenic 40.0%
TAAATTGAGTGTTCCCTTGC+AGG - Chr8:62270121-62270140 MsG0880045659.01.T01:intron 40.0%
TAATATACCTTGGAGATCCC+AGG + Chr8:62267406-62267425 None:intergenic 40.0%
TATCAACTGAGCTAAGGTCA+CGG + Chr8:62269744-62269763 None:intergenic 40.0%
TCATCTTAAGACAACCACAG+AGG - Chr8:62270279-62270298 MsG0880045659.01.T01:intron 40.0%
TCTATACCGTATTGAACCCT+GGG - Chr8:62267386-62267405 MsG0880045659.01.T01:CDS 40.0%
TCTGTGGTTGTCTTAAGATG+AGG + Chr8:62270280-62270299 None:intergenic 40.0%
! TGACCTTAGCTCAGTTGATA+GGG - Chr8:62269744-62269763 MsG0880045659.01.T01:CDS 40.0%
!! ATACACCGACTTATCTCTTC+CGG + Chr8:62268035-62268054 None:intergenic 40.0%
!! TACAAAGGAAGAGCACCTAA+TGG - Chr8:62268097-62268116 MsG0880045659.01.T01:intron 40.0%
!!! GGTTAGAGAGTTTTGAAGAG+AGG - Chr8:62268739-62268758 MsG0880045659.01.T01:intron 40.0%
!!! TTTTGAGGTGAAATCCTCTG+TGG + Chr8:62270296-62270315 None:intergenic 40.0%
ACGAATAGAGCTACAATGGC+AGG - Chr8:62267995-62268014 MsG0880045659.01.T01:intron 45.0%
AGCAACCGGAAGAGATAAGT+CGG - Chr8:62268027-62268046 MsG0880045659.01.T01:intron 45.0%
AGTTGAAAATGCACCTCCAC+AGG - Chr8:62268162-62268181 MsG0880045659.01.T01:intron 45.0%
ATCAACTGAGCTAAGGTCAC+GGG + Chr8:62269743-62269762 None:intergenic 45.0%
CGAATAGAGCTACAATGGCA+GGG - Chr8:62267996-62268015 MsG0880045659.01.T01:intron 45.0%
GAGAGAAAGTGACTGATTGG+AGG - Chr8:62270519-62270538 MsG0880045659.01.T01:intron 45.0%
GAGGGATCTTGACAAGTTTG+TGG - Chr8:62270538-62270557 MsG0880045659.01.T01:intron 45.0%
GCTGAGATCACTAACTAGAG+AGG + Chr8:62268832-62268851 None:intergenic 45.0%
GTGACCTTAGCTCAGTTGAT+AGG - Chr8:62269743-62269762 MsG0880045659.01.T01:CDS 45.0%
TGTCCCTATCAACTGAGCTA+AGG + Chr8:62269750-62269769 None:intergenic 45.0%
! ATATGGAGAAGTGGGGTATC+CGG + Chr8:62269803-62269822 None:intergenic 45.0%
!! AAAGAGGGACTTTCTAGCTG+AGG + Chr8:62270410-62270429 None:intergenic 45.0%
!! AATATTTAATTAATTAATCA+AGG + Chr8:62268274-62268293 None:intergenic 5.0%
!! ATATTTAATTAATTAATCAA+GGG + Chr8:62268273-62268292 None:intergenic 5.0%
!!! AAAAAAAAAACTTTATTTAA+AGG - Chr8:62269859-62269878 MsG0880045659.01.T01:CDS 5.0%
!!! TTTTATTTTTATTCATTTTA+AGG - Chr8:62269245-62269264 MsG0880045659.01.T01:intron 5.0%
AACCCAACCTTCTTCCTGCA+AGG + Chr8:62270138-62270157 None:intergenic 50.0%
AAGTAGCACCATCTCAAGGG+TGG - Chr8:62270244-62270263 MsG0880045659.01.T01:intron 50.0%
ACCCAACCTTCTTCCTGCAA+GGG + Chr8:62270137-62270156 None:intergenic 50.0%
AGTGTTCCCTTGCAGGAAGA+AGG - Chr8:62270128-62270147 MsG0880045659.01.T01:intron 50.0%
ATGTGTGAGCTTCCGTCACT+AGG - Chr8:62269827-62269846 MsG0880045659.01.T01:CDS 50.0%
ATTGAACCCTGGGATCTCCA+AGG - Chr8:62267396-62267415 MsG0880045659.01.T01:CDS 50.0%
CAACAAGCTCTCCATCCGTT+GGG + Chr8:62267306-62267325 None:intergenic 50.0%
CATGTGTCCCACCTGGATTT+CGG - Chr8:62267275-62267294 MsG0880045659.01.T01:CDS 50.0%
CTATTCGTTCTCGTCCCTGT+TGG + Chr8:62267983-62268002 None:intergenic 50.0%
GGAATGAGGAGCAACATGAG+TGG - Chr8:62267927-62267946 MsG0880045659.01.T01:intron 50.0%
GGAGATCCCAGGGTTCAATA+CGG + Chr8:62267395-62267414 None:intergenic 50.0%
TCCCTTGCAGGAAGAAGGTT+GGG - Chr8:62270133-62270152 MsG0880045659.01.T01:intron 50.0%
TGGATTTCGGTTCCACCCAA+CGG - Chr8:62267288-62267307 MsG0880045659.01.T01:CDS 50.0%
TTCCCTTGCAGGAAGAAGGT+TGG - Chr8:62270132-62270151 MsG0880045659.01.T01:intron 50.0%
! TATGGAGAAGTGGGGTATCC+GGG + Chr8:62269802-62269821 None:intergenic 50.0%
!! GGACTTTCTAGCTGAGGAAG+AGG + Chr8:62270404-62270423 None:intergenic 50.0%
AATGGGGTCCACCCTTGAGA+TGG + Chr8:62270255-62270274 None:intergenic 55.0%
ATGCAGAAGTCGGGGAATCC+CGG - Chr8:62269781-62269800 MsG0880045659.01.T01:CDS 55.0%
ATGGAGTCATGTGTCCCACC+TGG - Chr8:62267268-62267287 MsG0880045659.01.T01:CDS 55.0%
CCAACAAGCTCTCCATCCGT+TGG + Chr8:62267307-62267326 None:intergenic 55.0%
CCAACGGATGGAGAGCTTGT+TGG - Chr8:62267304-62267323 MsG0880045659.01.T01:CDS 55.0%
GAGCTACAATGGCAGGGTTC+TGG - Chr8:62268002-62268021 MsG0880045659.01.T01:intron 55.0%
GGTGGAACCGAAATCCAGGT+GGG + Chr8:62267285-62267304 None:intergenic 55.0%
GTTGGGTGGAACCGAAATCC+AGG + Chr8:62267289-62267308 None:intergenic 55.0%
TTTCGGTTCCACCCAACGGA+TGG - Chr8:62267292-62267311 MsG0880045659.01.T01:CDS 55.0%
!! GCAGGGTTCTGGAAAGCAAC+CGG - Chr8:62268013-62268032 MsG0880045659.01.T01:intron 55.0%
CAAGCTCTCCATCCGTTGGG+TGG + Chr8:62267303-62267322 None:intergenic 60.0%
GGGTGGAACCGAAATCCAGG+TGG + Chr8:62267286-62267305 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr8 gene 62267199 62270718 62267199 ID=MsG0880045659.01;Name=MsG0880045659.01
Chr8 mRNA 62267199 62270718 62267199 ID=MsG0880045659.01.T01;Parent=MsG0880045659.01;Name=MsG0880045659.01.T01;_AED=0.13;_eAED=0.14;_QI=0|0|0|1|0|0|3|0|359
Chr8 exon 62270621 62270718 62270621 ID=MsG0880045659.01.T01:exon:23833;Parent=MsG0880045659.01.T01
Chr8 exon 62269699 62270019 62269699 ID=MsG0880045659.01.T01:exon:23832;Parent=MsG0880045659.01.T01
Chr8 exon 62267199 62267859 62267199 ID=MsG0880045659.01.T01:exon:23831;Parent=MsG0880045659.01.T01
Chr8 CDS 62270621 62270718 62270621 ID=MsG0880045659.01.T01:cds;Parent=MsG0880045659.01.T01
Chr8 CDS 62269699 62270019 62269699 ID=MsG0880045659.01.T01:cds;Parent=MsG0880045659.01.T01
Chr8 CDS 62267199 62267859 62267199 ID=MsG0880045659.01.T01:cds;Parent=MsG0880045659.01.T01
Gene Sequence

>MsG0880045659.01.T01

ATGATGAAGAAAGTGTATAATGGTGTGTGGGGTGAATTTGATGCAGCAATAATACCATATATTTCTATGATGGAGTCATGTGTCCCACCTGGATTTCGATCTTTGTATACAGAGAGATGTAGAATTGGGAATGAGGAGCAACATGAGTGGTATTTTTTTAGTCACAAAGATAAGAAATATCCAACAGGGACGAGAACGAATAGAGCTACAATGGCAGGGTTCTGGAAAGCAACCGGAAGAGATAAGTCGGTGTATGAACGAACAAAACTGATTGGAATGAGGAAGACACTCGTTTTCTACAAAGGAAGAGCACCTAATGGACAGAAAACTGATTGGATCATGCATGAATATAGGCTTGAAACAGTTGAAAATGCACCTCCACAGGCAAGTATATACATATATTACATACCATATATTATGAGTTTAGAGAAATGGAAAGAAGAAAAAAAACAAGAAAATCATCACTCTTTAGCTTTCAAACTTAAATTGAGTGTTCCCTTGCAGGAAGAAGGTTGGGTTGTGTGCAAAGCATTCAAGAAAAAAACAAGTGTCCAAGCAAAAACAAATGAAAGATGGGATCCAGGTCACTTATATGATGAACAAACAAGTAGCACCATCTCAAGGGTGGACCCCATTGACCTCATCTTAAGACAACCACAGAGGATTTCACCTCAAAATTTCATGTACAAACAAGAGATAGAAGCAGAAGCAGAAGCAGAAGCAGATACATTATTAAGCTTCATGCATTCAGAACAAATGGTACCTCTTCCTCAGCTAGAAAGTCCCTCTTTAACAAAGAGGCAAAACTCAATGCCAATAATATCAGAACATAACAATAATGAATTTCAAAATGGATTATTATTCAACATCAACAACAAAAGAGAGAAAGTGACTGATTGGAGGGATCTTGACAAGTTTGTGGCTTCTCAGTTGAGTCAAGAAGATCATAGGCATGAAACAAGCTCAGACATGTCATTGTTCCTACTTCAAAGTAGTAAGGATGATGAAGAGAACAAGTTAAGCTCATTTTTAACTACAAGGTCAGATTGTGACATTGGTATATGTGTATTTGAAAATTAA

Protein sequence

>MsG0880045659.01.T01

MMKKVYNGVWGEFDAAIIPYISMMESCVPPGFRSLYTERCRIGNEEQHEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENAPPQASIYIYYIPYIMSLEKWKEEKKQENHHSLAFKLKLSVPLQEEGWVVCKAFKKKTSVQAKTNERWDPGHLYDEQTSSTISRVDPIDLILRQPQRISPQNFMYKQEIEAEAEAEADTLLSFMHSEQMVPLPQLESPSLTKRQNSMPIISEHNNNEFQNGLLFNINNKREKVTDWRDLDKFVASQLSQEDHRHETSSDMSLFLLQSSKDDEENKLSSFLTTRSDCDIGICVFEN*