Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045870.01.T01 | XP_039685349.1 | 96.694 | 242 | 5 | 1 | 1 | 242 | 12 | 250 | 1.68E-169 | 477 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045870.01.T01 | Q9FHA7 | 58.376 | 197 | 58 | 7 | 2 | 188 | 4 | 186 | 1.33E-49 | 165 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045870.01.T01 | A0A396GUJ0 | 96.694 | 242 | 5 | 1 | 1 | 242 | 12 | 250 | 8.01e-170 | 477 |
| Gene ID | Type | Classification |
|---|---|---|
| MsG0880045870.01.T01 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045870.01.T01 | MTR_5g017210 | 70.000 | 170 | 36 | 5 | 74 | 242 | 92 | 247 | 1.54e-62 | 196 |
| MsG0880045870.01.T01 | MTR_3g101810 | 53.670 | 218 | 74 | 6 | 10 | 205 | 40 | 252 | 1.66e-62 | 197 |
| MsG0880045870.01.T01 | MTR_8g093500 | 75.824 | 91 | 22 | 0 | 97 | 187 | 87 | 177 | 2.69e-46 | 155 |
| MsG0880045870.01.T01 | MTR_2g100490 | 52.027 | 148 | 62 | 4 | 80 | 218 | 242 | 389 | 1.25e-29 | 114 |
| MsG0880045870.01.T01 | MTR_8g015450 | 59.596 | 99 | 36 | 1 | 96 | 190 | 296 | 394 | 2.04e-27 | 108 |
| MsG0880045870.01.T01 | MTR_7g069590 | 66.667 | 60 | 20 | 0 | 130 | 189 | 32 | 91 | 5.60e-23 | 91.7 |
| MsG0880045870.01.T01 | MTR_5g079500 | 54.430 | 79 | 34 | 1 | 110 | 186 | 202 | 280 | 9.00e-20 | 86.7 |
| MsG0880045870.01.T01 | MTR_1g106460 | 52.239 | 67 | 32 | 0 | 120 | 186 | 234 | 300 | 3.78e-17 | 79.7 |
| MsG0880045870.01.T01 | MTR_1g018090 | 60.714 | 56 | 22 | 0 | 131 | 186 | 281 | 336 | 4.37e-17 | 79.7 |
| MsG0880045870.01.T01 | MTR_5g005110 | 62.963 | 54 | 20 | 0 | 133 | 186 | 233 | 286 | 6.44e-17 | 79.0 |
| MsG0880045870.01.T01 | MTR_1g106470 | 60.714 | 56 | 22 | 0 | 131 | 186 | 203 | 258 | 1.44e-16 | 77.4 |
| MsG0880045870.01.T01 | MTR_3g103030 | 55.556 | 63 | 28 | 0 | 124 | 186 | 229 | 291 | 4.12e-16 | 76.6 |
| MsG0880045870.01.T01 | MTR_1g080890 | 47.059 | 85 | 37 | 1 | 117 | 201 | 186 | 262 | 3.03e-15 | 74.3 |
| MsG0880045870.01.T01 | MTR_4g131160 | 52.778 | 72 | 26 | 1 | 131 | 202 | 206 | 269 | 7.95e-15 | 73.6 |
| MsG0880045870.01.T01 | MTR_4g131160 | 52.778 | 72 | 26 | 1 | 131 | 202 | 203 | 266 | 8.03e-15 | 73.6 |
| MsG0880045870.01.T01 | MTR_1g106480 | 64.444 | 45 | 16 | 0 | 142 | 186 | 87 | 131 | 1.60e-13 | 66.6 |
| MsG0880045870.01.T01 | MTR_2g067000 | 48.000 | 75 | 32 | 1 | 120 | 187 | 146 | 220 | 5.14e-13 | 67.4 |
| MsG0880045870.01.T01 | MTR_1g060700 | 57.407 | 54 | 23 | 0 | 134 | 187 | 357 | 410 | 3.10e-12 | 65.9 |
| MsG0880045870.01.T01 | MTR_4g033295 | 57.143 | 56 | 23 | 1 | 134 | 188 | 128 | 183 | 6.73e-12 | 62.8 |
| MsG0880045870.01.T01 | MTR_4g033295 | 57.407 | 54 | 22 | 1 | 134 | 186 | 128 | 181 | 1.81e-11 | 61.6 |
| MsG0880045870.01.T01 | MTR_2g089070 | 48.148 | 54 | 28 | 0 | 134 | 187 | 146 | 199 | 7.08e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045870.01.T01 | AT5G67060 | 58.376 | 197 | 58 | 7 | 2 | 188 | 4 | 186 | 1.35e-50 | 165 |
| MsG0880045870.01.T01 | AT3G50330 | 55.769 | 208 | 67 | 7 | 6 | 205 | 11 | 201 | 1.40e-50 | 165 |
| MsG0880045870.01.T01 | AT5G67060 | 58.511 | 188 | 55 | 6 | 10 | 188 | 1 | 174 | 1.29e-48 | 160 |
| MsG0880045870.01.T01 | AT4G00120 | 68.750 | 96 | 27 | 1 | 99 | 191 | 87 | 182 | 1.95e-39 | 135 |
| MsG0880045870.01.T01 | AT3G21330 | 64.894 | 94 | 33 | 0 | 96 | 189 | 241 | 334 | 2.25e-36 | 132 |
| MsG0880045870.01.T01 | AT5G09750 | 76.667 | 90 | 21 | 0 | 97 | 186 | 92 | 181 | 9.98e-35 | 124 |
| MsG0880045870.01.T01 | AT5G01305 | 69.492 | 59 | 18 | 0 | 125 | 183 | 38 | 96 | 6.89e-22 | 89.4 |
| MsG0880045870.01.T01 | AT5G37800 | 35.542 | 166 | 78 | 5 | 24 | 186 | 124 | 263 | 1.77e-18 | 83.2 |
| MsG0880045870.01.T01 | AT5G43175 | 50.725 | 69 | 34 | 0 | 118 | 186 | 126 | 194 | 2.36e-18 | 81.3 |
| MsG0880045870.01.T01 | AT4G33880 | 59.677 | 62 | 25 | 0 | 125 | 186 | 267 | 328 | 2.89e-18 | 82.8 |
| MsG0880045870.01.T01 | AT1G66470 | 67.273 | 55 | 18 | 0 | 132 | 186 | 203 | 257 | 6.60e-18 | 81.3 |
| MsG0880045870.01.T01 | AT1G27740 | 52.941 | 68 | 32 | 0 | 119 | 186 | 162 | 229 | 6.95e-18 | 80.5 |
| MsG0880045870.01.T01 | AT2G14760 | 58.065 | 62 | 26 | 0 | 125 | 186 | 238 | 299 | 2.42e-17 | 80.1 |
| MsG0880045870.01.T01 | AT2G24260 | 41.071 | 112 | 47 | 3 | 122 | 215 | 28 | 138 | 1.30e-16 | 77.0 |
| MsG0880045870.01.T01 | AT2G24260 | 41.071 | 112 | 47 | 3 | 122 | 215 | 131 | 241 | 4.77e-16 | 76.6 |
| MsG0880045870.01.T01 | AT4G30980 | 41.584 | 101 | 51 | 1 | 120 | 220 | 126 | 218 | 1.03e-15 | 75.5 |
| MsG0880045870.01.T01 | AT4G30980 | 49.398 | 83 | 34 | 1 | 120 | 202 | 174 | 248 | 2.30e-15 | 74.7 |
| MsG0880045870.01.T01 | AT5G58010 | 47.674 | 86 | 36 | 2 | 121 | 205 | 96 | 173 | 1.27e-14 | 72.0 |
| MsG0880045870.01.T01 | AT2G14760 | 48.000 | 75 | 26 | 1 | 125 | 186 | 238 | 312 | 5.38e-14 | 70.9 |
Find 54 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGAAGCAGTGTCCATTT+TGG | 0.242900 | 8:-65725823 | None:intergenic |
| AATAATGTGAATTATAATTC+TGG | 0.269339 | 8:+65725981 | MsG0880045870.01.T01:CDS |
| CTTCGGCGGCCTAACGGATT+CGG | 0.285239 | 8:-65725691 | None:intergenic |
| CACATTGGTGGTGGATTCAT+TGG | 0.306846 | 8:+65725933 | MsG0880045870.01.T01:CDS |
| AAAGGTTGATCAGAGAATTC+AGG | 0.327420 | 8:-65725381 | None:intergenic |
| CAGTGTTGTTGGTGATTTCT+TGG | 0.347528 | 8:-65725425 | None:intergenic |
| GTGGAGATGATAGTGCATTT+TGG | 0.349089 | 8:-65725467 | None:intergenic |
| GTGTAGCTGCTAGGCATAGA+AGG | 0.352095 | 8:+65725748 | MsG0880045870.01.T01:CDS |
| AAAGGATAAGTGAGAGGATA+AGG | 0.357712 | 8:+65725772 | MsG0880045870.01.T01:CDS |
| TTCGGCGGCCTAACGGATTC+GGG | 0.378261 | 8:-65725690 | None:intergenic |
| AGTACCTGGTGGAACCAAAA+TGG | 0.383832 | 8:+65725809 | MsG0880045870.01.T01:CDS |
| TAACTAGCTAAGCAATTGTT+TGG | 0.384797 | 8:-65726051 | None:intergenic |
| CCTTCTCTTCGGCGGCCTAA+CGG | 0.391457 | 8:-65725697 | None:intergenic |
| ATCTTCACATTCCTTCTCTT+CGG | 0.392038 | 8:-65725708 | None:intergenic |
| TGCCTAGCAGCTACACTTTG+TGG | 0.400476 | 8:-65725741 | None:intergenic |
| TCAATATTATTCAAACTTTG+TGG | 0.420960 | 8:-65725486 | None:intergenic |
| TAATTCTGGTTTGATGATGA+AGG | 0.423318 | 8:+65725995 | MsG0880045870.01.T01:CDS |
| AAAGAATTCGACTGCGAGTA+AGG | 0.432337 | 8:-65725591 | None:intergenic |
| GATTCGGGATCGATATGTAT+AGG | 0.452777 | 8:-65725675 | None:intergenic |
| AAGGTTGATCAGAGAATTCA+GGG | 0.455273 | 8:-65725380 | None:intergenic |
| GCTAAGCAATTGTTTGGAAG+TGG | 0.457304 | 8:-65726045 | None:intergenic |
| GTTGGTGATTTCTTGGTAAG+TGG | 0.468287 | 8:-65725418 | None:intergenic |
| CCGTTAGGCCGCCGAAGAGA+AGG | 0.485491 | 8:+65725697 | MsG0880045870.01.T01:CDS |
| AAATAATGGAACAGTGTTGT+TGG | 0.485998 | 8:-65725436 | None:intergenic |
| GATAGCAATGATGATGCAAA+TGG | 0.487640 | 8:+65725350 | MsG0880045870.01.T01:CDS |
| GTGGAACCCACCATTTGAAA+AGG | 0.490966 | 8:-65726026 | None:intergenic |
| GTGGTGGGAGTGTTATAAAA+AGG | 0.493586 | 8:-65725399 | None:intergenic |
| ATATCGATCCCGAATCCGTT+AGG | 0.506193 | 8:+65725682 | MsG0880045870.01.T01:CDS |
| GTGATTTCTTGGTAAGTGGT+GGG | 0.510263 | 8:-65725414 | None:intergenic |
| GTAAGGAAATGATGAAGAGT+TGG | 0.515713 | 8:-65725574 | None:intergenic |
| TTCACACGTTGGAACAAGTA+GGG | 0.518979 | 8:+65725889 | MsG0880045870.01.T01:CDS |
| GAATTCGATGGCAGCGATGA+GGG | 0.520911 | 8:+65725623 | MsG0880045870.01.T01:CDS |
| GGTGATTTCTTGGTAAGTGG+TGG | 0.542766 | 8:-65725415 | None:intergenic |
| GAAGAGTTGGTTTGAAGAGA+TGG | 0.565464 | 8:-65725561 | None:intergenic |
| TTCACATTCCTTCTCTTCGG+CGG | 0.566092 | 8:-65725705 | None:intergenic |
| ATTGGTGGTGGATTCATTGG+AGG | 0.568963 | 8:+65725936 | MsG0880045870.01.T01:CDS |
| GAAGGGAAAGGATAAGTGAG+AGG | 0.571416 | 8:+65725766 | MsG0880045870.01.T01:CDS |
| TTGGTGGTGGATTCATTGGA+GGG | 0.580871 | 8:+65725937 | MsG0880045870.01.T01:CDS |
| TTGACATTGGAGTGTAGAAG+TGG | 0.581516 | 8:-65725510 | None:intergenic |
| AATTCTGGTTTGATGATGAA+GGG | 0.584821 | 8:+65725996 | MsG0880045870.01.T01:CDS |
| GTTCACACGTTGGAACAAGT+AGG | 0.594798 | 8:+65725888 | MsG0880045870.01.T01:CDS |
| TCACAATCACACATTGGTGG+TGG | 0.595725 | 8:+65725924 | MsG0880045870.01.T01:CDS |
| GAAGAAACAAGTTCACACGT+TGG | 0.614768 | 8:+65725878 | MsG0880045870.01.T01:CDS |
| AGAATTCGATGGCAGCGATG+AGG | 0.615506 | 8:+65725622 | MsG0880045870.01.T01:CDS |
| TGTAGCTGCTAGGCATAGAA+GGG | 0.616015 | 8:+65725749 | MsG0880045870.01.T01:CDS |
| CTGCTAGGCATAGAAGGGAA+AGG | 0.619057 | 8:+65725754 | MsG0880045870.01.T01:CDS |
| ATCCACAAAGTGTAGCTGCT+AGG | 0.619623 | 8:+65725739 | MsG0880045870.01.T01:CDS |
| AAGGAATGTGAAGATATCAA+AGG | 0.620019 | 8:+65725716 | MsG0880045870.01.T01:CDS |
| GAGTTGGTTTGAAGAGATGG+TGG | 0.649591 | 8:-65725558 | None:intergenic |
| AATAGATCACAATCACACAT+TGG | 0.653131 | 8:+65725918 | MsG0880045870.01.T01:CDS |
| AGATCACAATCACACATTGG+TGG | 0.659957 | 8:+65725921 | MsG0880045870.01.T01:CDS |
| TCACACGTTGGAACAAGTAG+GGG | 0.679972 | 8:+65725890 | MsG0880045870.01.T01:CDS |
| ATATTACAAAGATTAGTACC+TGG | 0.683168 | 8:+65725795 | MsG0880045870.01.T01:CDS |
| TTACAAAGATTAGTACCTGG+TGG | 0.689802 | 8:+65725798 | MsG0880045870.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATGTGAATTATAATTC+TGG | + | Chr8:65725981-65726000 | MsG0880045870.01.T01:CDS | 15.0% |
| !! | TCAATATTATTCAAACTTTG+TGG | - | Chr8:65725489-65725508 | None:intergenic | 20.0% |
| !!! | TTTTGGTTAAGGTTAAATAA+TGG | - | Chr8:65725453-65725472 | None:intergenic | 20.0% |
| ! | ATATTACAAAGATTAGTACC+TGG | + | Chr8:65725795-65725814 | MsG0880045870.01.T01:CDS | 25.0% |
| !!! | TTTTGAAAAGAAGAATTCGA+TGG | + | Chr8:65725611-65725630 | MsG0880045870.01.T01:CDS | 25.0% |
| AAGGAATGTGAAGATATCAA+AGG | + | Chr8:65725716-65725735 | MsG0880045870.01.T01:CDS | 30.0% | |
| AATAGATCACAATCACACAT+TGG | + | Chr8:65725918-65725937 | MsG0880045870.01.T01:CDS | 30.0% | |
| ! | AAATAATGGAACAGTGTTGT+TGG | - | Chr8:65725439-65725458 | None:intergenic | 30.0% |
| !! | AATTCTGGTTTGATGATGAA+GGG | + | Chr8:65725996-65726015 | MsG0880045870.01.T01:CDS | 30.0% |
| !! | GTGTGATATTCAAGTTTTGT+TGG | - | Chr8:65725539-65725558 | None:intergenic | 30.0% |
| !! | GTTTTGTTGGAAATTGACAT+TGG | - | Chr8:65725526-65725545 | None:intergenic | 30.0% |
| !! | TAATTCTGGTTTGATGATGA+AGG | + | Chr8:65725995-65726014 | MsG0880045870.01.T01:CDS | 30.0% |
| !!! | ATGATAGTGCATTTTGGTTA+AGG | - | Chr8:65725464-65725483 | None:intergenic | 30.0% |
| AAAGGATAAGTGAGAGGATA+AGG | + | Chr8:65725772-65725791 | MsG0880045870.01.T01:CDS | 35.0% | |
| ATCTTCACATTCCTTCTCTT+CGG | - | Chr8:65725711-65725730 | None:intergenic | 35.0% | |
| GTAAGGAAATGATGAAGAGT+TGG | - | Chr8:65725577-65725596 | None:intergenic | 35.0% | |
| TTACAAAGATTAGTACCTGG+TGG | + | Chr8:65725798-65725817 | MsG0880045870.01.T01:CDS | 35.0% | |
| ! | AAAGGTTGATCAGAGAATTC+AGG | - | Chr8:65725384-65725403 | None:intergenic | 35.0% |
| ! | AAGGTTGATCAGAGAATTCA+GGG | - | Chr8:65725383-65725402 | None:intergenic | 35.0% |
| ! | GATAGCAATGATGATGCAAA+TGG | + | Chr8:65725350-65725369 | MsG0880045870.01.T01:CDS | 35.0% |
| ! | TGTCAACCTTTTCAAATGGT+GGG | + | Chr8:65726020-65726039 | MsG0880045870.01.T01:CDS | 35.0% |
| ! | TTGTCAACCTTTTCAAATGG+TGG | + | Chr8:65726019-65726038 | MsG0880045870.01.T01:CDS | 35.0% |
| AAAGAATTCGACTGCGAGTA+AGG | - | Chr8:65725594-65725613 | None:intergenic | 40.0% | |
| AGATCACAATCACACATTGG+TGG | + | Chr8:65725921-65725940 | MsG0880045870.01.T01:CDS | 40.0% | |
| GAAGAAACAAGTTCACACGT+TGG | + | Chr8:65725878-65725897 | MsG0880045870.01.T01:CDS | 40.0% | |
| GATTCGGGATCGATATGTAT+AGG | - | Chr8:65725678-65725697 | None:intergenic | 40.0% | |
| GCTAAGCAATTGTTTGGAAG+TGG | - | Chr8:65726048-65726067 | None:intergenic | 40.0% | |
| GTGATTTCTTGGTAAGTGGT+GGG | - | Chr8:65725417-65725436 | None:intergenic | 40.0% | |
| TTCACACGTTGGAACAAGTA+GGG | + | Chr8:65725889-65725908 | MsG0880045870.01.T01:CDS | 40.0% | |
| TTGACATTGGAGTGTAGAAG+TGG | - | Chr8:65725513-65725532 | None:intergenic | 40.0% | |
| ! | CATTGAAGCAGTGTCCATTT+TGG | - | Chr8:65725826-65725845 | None:intergenic | 40.0% |
| ! | GGGTTGTCAACCTTTTCAAA+TGG | + | Chr8:65726016-65726035 | MsG0880045870.01.T01:CDS | 40.0% |
| !! | CAGTGTTGTTGGTGATTTCT+TGG | - | Chr8:65725428-65725447 | None:intergenic | 40.0% |
| !! | GAAGAGTTGGTTTGAAGAGA+TGG | - | Chr8:65725564-65725583 | None:intergenic | 40.0% |
| !! | GTGGAGATGATAGTGCATTT+TGG | - | Chr8:65725470-65725489 | None:intergenic | 40.0% |
| !! | GTGGTGGGAGTGTTATAAAA+AGG | - | Chr8:65725402-65725421 | None:intergenic | 40.0% |
| !! | GTTGGTGATTTCTTGGTAAG+TGG | - | Chr8:65725421-65725440 | None:intergenic | 40.0% |
| AGTACCTGGTGGAACCAAAA+TGG | + | Chr8:65725809-65725828 | MsG0880045870.01.T01:CDS | 45.0% | |
| ATATCGATCCCGAATCCGTT+AGG | + | Chr8:65725682-65725701 | MsG0880045870.01.T01:CDS | 45.0% | |
| ATCCACAAAGTGTAGCTGCT+AGG | + | Chr8:65725739-65725758 | MsG0880045870.01.T01:CDS | 45.0% | |
| GAAGGGAAAGGATAAGTGAG+AGG | + | Chr8:65725766-65725785 | MsG0880045870.01.T01:CDS | 45.0% | |
| GGTGATTTCTTGGTAAGTGG+TGG | - | Chr8:65725418-65725437 | None:intergenic | 45.0% | |
| GTGGAACCCACCATTTGAAA+AGG | - | Chr8:65726029-65726048 | None:intergenic | 45.0% | |
| GTTCACACGTTGGAACAAGT+AGG | + | Chr8:65725888-65725907 | MsG0880045870.01.T01:CDS | 45.0% | |
| TCACAATCACACATTGGTGG+TGG | + | Chr8:65725924-65725943 | MsG0880045870.01.T01:CDS | 45.0% | |
| TCACACGTTGGAACAAGTAG+GGG | + | Chr8:65725890-65725909 | MsG0880045870.01.T01:CDS | 45.0% | |
| TGTAGCTGCTAGGCATAGAA+GGG | + | Chr8:65725749-65725768 | MsG0880045870.01.T01:CDS | 45.0% | |
| TTCACATTCCTTCTCTTCGG+CGG | - | Chr8:65725708-65725727 | None:intergenic | 45.0% | |
| !! | ATTGGTGGTGGATTCATTGG+AGG | + | Chr8:65725936-65725955 | MsG0880045870.01.T01:CDS | 45.0% |
| !! | CACATTGGTGGTGGATTCAT+TGG | + | Chr8:65725933-65725952 | MsG0880045870.01.T01:CDS | 45.0% |
| !! | GAGTTGGTTTGAAGAGATGG+TGG | - | Chr8:65725561-65725580 | None:intergenic | 45.0% |
| !! | TTGGTGGTGGATTCATTGGA+GGG | + | Chr8:65725937-65725956 | MsG0880045870.01.T01:CDS | 45.0% |
| AGAATTCGATGGCAGCGATG+AGG | + | Chr8:65725622-65725641 | MsG0880045870.01.T01:CDS | 50.0% | |
| CTGCTAGGCATAGAAGGGAA+AGG | + | Chr8:65725754-65725773 | MsG0880045870.01.T01:CDS | 50.0% | |
| GAATTCGATGGCAGCGATGA+GGG | + | Chr8:65725623-65725642 | MsG0880045870.01.T01:CDS | 50.0% | |
| GTGTAGCTGCTAGGCATAGA+AGG | + | Chr8:65725748-65725767 | MsG0880045870.01.T01:CDS | 50.0% | |
| TGCCTAGCAGCTACACTTTG+TGG | - | Chr8:65725744-65725763 | None:intergenic | 50.0% | |
| !!! | GTGTCCATTTTGGTTCCACC+AGG | - | Chr8:65725816-65725835 | None:intergenic | 50.0% |
| CCTTCTCTTCGGCGGCCTAA+CGG | - | Chr8:65725700-65725719 | None:intergenic | 60.0% | |
| !! | CTTCGGCGGCCTAACGGATT+CGG | - | Chr8:65725694-65725713 | None:intergenic | 60.0% |
| !! | TTCGGCGGCCTAACGGATTC+GGG | - | Chr8:65725693-65725712 | None:intergenic | 60.0% |
| CCGTTAGGCCGCCGAAGAGA+AGG | + | Chr8:65725697-65725716 | MsG0880045870.01.T01:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 65725342 | 65726070 | 65725342 | ID=MsG0880045870.01;Name=MsG0880045870.01 |
| Chr8 | mRNA | 65725342 | 65726070 | 65725342 | ID=MsG0880045870.01.T01;Parent=MsG0880045870.01;Name=MsG0880045870.01.T01;_AED=0.21;_eAED=0.21;_QI=0|-1|0|1|-1|1|1|0|242 |
| Chr8 | exon | 65725342 | 65726070 | 65725342 | ID=MsG0880045870.01.T01:exon:13640;Parent=MsG0880045870.01.T01 |
| Chr8 | CDS | 65725342 | 65726070 | 65725342 | ID=MsG0880045870.01.T01:cds;Parent=MsG0880045870.01.T01 |
| Gene Sequence |
| Protein sequence |
