AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880046738.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046738.01.T01 MTR_4g113790 98.980 490 3 1 3 490 1 490 0.0 1003
MsG0880046738.01.T01 MTR_2g027240 56.219 402 147 7 66 457 179 561 2.26e-156 457
MsG0880046738.01.T01 MTR_6g004720 54.394 421 162 7 44 457 204 601 2.76e-152 448
MsG0880046738.01.T01 MTR_8g006870 55.335 403 157 6 58 456 337 720 1.47e-150 448
MsG0880046738.01.T01 MTR_7g081665 53.941 406 159 7 58 457 331 714 1.55e-150 448
MsG0880046738.01.T01 MTR_7g033640 55.750 400 152 7 66 457 207 589 1.94e-148 438
MsG0880046738.01.T01 MTR_7g104180 54.637 399 154 8 65 457 466 843 3.14e-144 435
MsG0880046738.01.T01 MTR_1g060790 53.676 408 160 8 58 457 435 821 1.66e-143 433
MsG0880046738.01.T01 MTR_8g089420 50.995 402 167 6 66 462 52 428 6.97e-139 408
MsG0880046738.01.T01 MTR_2g018990 49.188 431 180 7 66 490 57 454 1.04e-137 405
MsG0880046738.01.T01 MTR_3g010260 51.117 403 168 8 63 457 387 768 1.24e-137 416
MsG0880046738.01.T01 MTR_8g446990 47.748 444 198 8 27 457 61 483 2.56e-133 396
MsG0880046738.01.T01 MTR_2g062850 46.085 447 210 9 19 457 97 520 3.57e-133 397
MsG0880046738.01.T01 MTR_2g085065 50.129 387 157 8 75 449 71 433 4.63e-123 367
MsG0880046738.01.T01 MTR_2g069990 45.783 415 178 9 45 456 49 419 1.36e-121 365
MsG0880046738.01.T01 MTR_8g070530 41.388 389 168 6 66 454 572 900 1.04e-100 323
MsG0880046738.01.T01 MTR_2g095980 42.711 391 172 7 66 456 346 684 6.50e-97 308
MsG0880046738.01.T01 MTR_2g095980 42.711 391 172 7 66 456 601 939 7.73e-95 308
MsG0880046738.01.T01 MTR_2g095980 42.711 391 172 7 66 456 601 939 1.28e-94 308
MsG0880046738.01.T01 MTR_4g061610 40.863 394 161 9 66 456 619 943 1.18e-90 297
MsG0880046738.01.T01 MTR_2g098240 39.037 374 174 6 88 458 12 334 1.53e-78 250
MsG0880046738.01.T01 MTR_4g065080 37.500 392 189 10 90 458 12 370 1.88e-77 249
MsG0880046738.01.T01 MTR_8g011780 38.281 384 176 11 93 457 20 361 3.03e-73 238
MsG0880046738.01.T01 MTR_7g053200 35.806 391 202 11 83 460 1 355 1.09e-66 221
MsG0880046738.01.T01 MTR_4g035835 31.818 374 196 9 85 458 751 1065 1.28e-51 189
MsG0880046738.01.T01 MTR_5g069000 31.818 374 196 9 85 458 755 1069 4.38e-51 187
MsG0880046738.01.T01 MTR_6g470940 30.526 380 204 9 85 463 869 1189 3.45e-48 179
MsG0880046738.01.T01 MTR_1g069735 31.053 380 207 11 81 457 108 435 1.23e-47 171
MsG0880046738.01.T01 MTR_1g069735 31.053 380 207 11 81 457 108 435 1.70e-47 171
MsG0880046738.01.T01 MTR_1g069735 31.316 380 206 12 81 457 108 435 5.31e-47 171
MsG0880046738.01.T01 MTR_1g075880 31.135 379 209 11 81 457 105 433 4.53e-46 168
MsG0880046738.01.T01 MTR_1g042700 30.025 393 220 10 76 466 101 440 3.11e-45 166
MsG0880046738.01.T01 MTR_7g097150 31.496 381 204 12 81 457 108 435 4.70e-45 166
MsG0880046738.01.T01 MTR_3g104700 29.650 371 209 13 81 445 82 406 1.01e-41 156
MsG0880046738.01.T01 MTR_1g442790 29.427 384 217 11 76 457 96 427 7.08e-40 151
MsG0880046738.01.T01 MTR_1g442790 29.427 384 217 11 76 457 96 427 1.09e-39 150
MsG0880046738.01.T01 MTR_1g019340 28.871 381 218 11 81 458 96 426 1.10e-39 149
MsG0880046738.01.T01 MTR_1g019340 28.158 380 222 10 81 458 96 426 1.40e-39 150
MsG0880046738.01.T01 MTR_3g104700 28.871 381 216 14 81 445 82 423 4.93e-39 149
MsG0880046738.01.T01 MTR_2g040150 28.184 369 217 9 81 445 101 425 1.19e-37 145
MsG0880046738.01.T01 MTR_1g090917 26.790 377 194 7 81 456 39 334 9.67e-35 136
MsG0880046738.01.T01 MTR_1g090917 26.790 377 194 7 81 456 39 334 1.51e-34 135
MsG0880046738.01.T01 MTR_1g090917 27.018 285 131 6 173 456 1 209 3.44e-25 107
MsG0880046738.01.T01 MTR_1g090917 27.018 285 131 6 173 456 1 209 4.24e-25 106
MsG0880046738.01.T01 MTR_7g073520 38.509 161 92 4 87 247 142 295 1.15e-24 107
MsG0880046738.01.T01 MTR_7g073520 37.179 156 82 5 329 481 301 443 1.60e-21 97.8
MsG0880046738.01.T01 MTR_4g107280 39.552 134 69 3 329 459 210 334 2.08e-23 102
MsG0880046738.01.T01 MTR_4g107280 45.333 75 35 2 173 245 132 202 7.17e-13 70.5
MsG0880046738.01.T01 MTR_4g107280 39.552 134 69 3 329 459 249 373 2.75e-23 102
MsG0880046738.01.T01 MTR_4g107280 32.727 165 103 3 85 245 81 241 6.06e-22 98.2
MsG0880046738.01.T01 MTR_8g035890 26.331 338 153 11 90 425 13 256 7.17e-20 90.1
MsG0880046738.01.T01 MTR_3g088715 39.496 119 61 2 323 441 19 126 1.31e-18 82.4
MsG0880046738.01.T01 MTR_3g110405 31.720 186 116 3 63 246 7 183 2.28e-18 85.9
MsG0880046738.01.T01 MTR_3g110405 35.052 97 56 1 329 425 188 277 1.00e-11 66.2
MsG0880046738.01.T01 MTR_6g087000 37.226 137 71 4 327 458 910 1036 1.33e-17 86.7
MsG0880046738.01.T01 MTR_2g020380 24.405 336 164 8 90 425 1 246 3.68e-17 85.5
MsG0880046738.01.T01 MTR_4g029020 26.904 197 122 5 86 281 5 180 1.41e-15 79.3
MsG0880046738.01.T01 MTR_7g072575 26.396 197 125 5 85 281 4 180 2.98e-15 78.2
MsG0880046738.01.T01 MTR_3g099920 23.864 352 173 11 90 441 16 272 3.23e-15 78.2
MsG0880046738.01.T01 MTR_3g466480 29.630 189 113 5 93 281 21 189 1.18e-14 76.3
MsG0880046738.01.T01 MTR_3g072320 26.396 197 123 5 85 281 4 178 2.95e-14 75.1
MsG0880046738.01.T01 MTR_1g076370 27.861 201 109 7 90 281 17 190 3.10e-14 75.1
MsG0880046738.01.T01 MTR_5g075100 29.101 189 115 5 93 281 23 192 3.72e-14 74.7
MsG0880046738.01.T01 MTR_2g049790 25.758 198 128 5 84 281 14 192 7.66e-14 73.9
MsG0880046738.01.T01 MTR_8g040300 30.189 159 102 3 90 247 7 157 1.22e-13 71.6
MsG0880046738.01.T01 MTR_8g040300 39.175 97 52 1 329 425 161 250 2.11e-13 70.9
MsG0880046738.01.T01 MTR_4g131060 28.042 189 116 5 93 281 18 186 1.26e-13 73.2
MsG0880046738.01.T01 MTR_2g045470 27.500 200 126 6 82 281 9 189 2.09e-13 72.8
MsG0880046738.01.T01 MTR_3g466400 26.000 200 116 6 88 281 9 182 2.39e-13 72.4
MsG0880046738.01.T01 MTR_1g101630 31.447 159 98 4 91 245 39 190 2.74e-13 72.4
MsG0880046738.01.T01 MTR_1g096490 30.000 190 114 6 61 246 6 180 4.18e-13 71.6
MsG0880046738.01.T01 MTR_1g103760 27.500 200 119 7 85 281 4 180 6.16e-13 71.2
MsG0880046738.01.T01 MTR_5g067150 25.397 189 120 4 93 281 9 176 9.56e-13 70.5
MsG0880046738.01.T01 MTR_5g067150 25.397 189 120 4 93 281 9 176 1.01e-12 70.1
MsG0880046738.01.T01 MTR_1g081000 27.215 158 106 4 90 245 1 151 1.04e-12 70.9
MsG0880046738.01.T01 MTR_5g088350 26.667 195 122 6 87 281 9 182 1.20e-12 70.1
MsG0880046738.01.T01 MTR_1g081000 27.215 158 106 4 90 245 1 151 1.22e-12 70.5
MsG0880046738.01.T01 MTR_5g067150 26.752 157 99 2 125 281 36 176 1.35e-12 69.7
MsG0880046738.01.T01 MTR_5g088350 26.667 195 122 6 87 281 9 182 1.77e-12 68.9
MsG0880046738.01.T01 MTR_7g116390 44.211 95 47 2 334 427 176 265 2.12e-12 68.2
MsG0880046738.01.T01 MTR_5g088350 26.667 195 122 6 87 281 9 182 2.22e-12 69.3
MsG0880046738.01.T01 MTR_5g075060 25.381 197 123 6 87 281 6 180 2.34e-12 69.3
MsG0880046738.01.T01 MTR_4g006970 25.510 196 122 5 88 281 15 188 2.58e-12 69.3
MsG0880046738.01.T01 MTR_8g024590 25.641 195 122 5 87 281 13 184 2.63e-12 68.9
MsG0880046738.01.T01 MTR_0464s0040 28.571 161 107 4 85 245 4 156 3.67e-12 65.9
MsG0880046738.01.T01 MTR_8g024600 25.128 195 123 5 87 281 13 184 5.33e-12 68.2
MsG0880046738.01.T01 MTR_2g016340 27.273 198 124 7 84 281 3 180 5.38e-12 68.2
MsG0880046738.01.T01 MTR_1g040875 27.723 202 113 7 87 281 18 193 1.05e-11 67.0
MsG0880046738.01.T01 MTR_8g086380 26.804 194 118 5 90 281 23 194 1.47e-11 67.0
MsG0880046738.01.T01 MTR_1g013700 24.855 173 105 4 119 281 24 181 4.78e-11 65.1
MsG0880046738.01.T01 MTR_4g051648 25.478 157 110 3 90 245 5 155 5.60e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880046738.01.T01 AT2G26700 59.515 536 158 15 3 490 1 525 0.0 598
MsG0880046738.01.T01 AT4G26610 53.153 444 188 5 17 457 47 473 4.37e-158 459
MsG0880046738.01.T01 AT5G47750 57.250 400 144 7 66 457 164 544 1.97e-156 457
MsG0880046738.01.T01 AT5G55910 53.670 436 172 10 66 490 82 498 1.03e-154 450
MsG0880046738.01.T01 AT5G55910 53.670 436 172 10 66 490 82 498 1.03e-154 450
MsG0880046738.01.T01 AT5G40030 54.478 402 148 8 65 457 85 460 6.81e-148 432
MsG0880046738.01.T01 AT2G44830 52.607 422 177 7 41 457 311 714 2.75e-143 429
MsG0880046738.01.T01 AT2G44830 52.607 422 177 7 41 457 311 714 2.75e-143 429
MsG0880046738.01.T01 AT2G44830 52.607 422 177 7 41 457 311 714 2.75e-143 429
MsG0880046738.01.T01 AT3G52890 52.656 433 181 8 32 457 481 896 3.17e-143 434
MsG0880046738.01.T01 AT3G52890 52.656 433 181 8 32 457 481 896 3.17e-143 434
MsG0880046738.01.T01 AT3G52890 52.656 433 181 8 32 457 481 896 3.17e-143 434
MsG0880046738.01.T01 AT3G52890 52.656 433 181 8 32 457 481 896 3.17e-143 434
MsG0880046738.01.T01 AT2G36350 55.025 398 159 7 66 457 532 915 1.13e-140 428
MsG0880046738.01.T01 AT5G03640 48.465 456 176 10 17 457 484 895 3.22e-140 426
MsG0880046738.01.T01 AT5G03640 48.465 456 176 10 17 457 484 895 3.22e-140 426
MsG0880046738.01.T01 AT2G34650 48.946 427 178 8 66 490 50 438 1.40e-138 406
MsG0880046738.01.T01 AT3G12690 50.000 406 177 6 55 457 144 526 1.14e-137 409
MsG0880046738.01.T01 AT3G12690 50.000 406 177 6 55 457 144 526 1.14e-137 409
MsG0880046738.01.T01 AT3G12690 50.000 406 177 6 55 457 144 526 1.14e-137 409
MsG0880046738.01.T01 AT1G79250 50.990 404 163 6 65 457 118 497 1.37e-137 408
MsG0880046738.01.T01 AT1G79250 50.990 404 163 6 65 457 118 497 1.37e-137 408
MsG0880046738.01.T01 AT1G79250 50.990 404 163 6 65 457 118 497 1.37e-137 408
MsG0880046738.01.T01 AT1G79250 50.990 404 163 6 65 457 118 497 1.37e-137 408
MsG0880046738.01.T01 AT1G16440 50.255 392 171 5 66 457 86 453 4.81e-134 397
MsG0880046738.01.T01 AT3G27580 50.739 406 161 10 66 457 153 533 5.38e-132 394
MsG0880046738.01.T01 AT3G27580 50.739 406 161 10 66 457 153 533 5.38e-132 394
MsG0880046738.01.T01 AT3G44610 49.867 377 142 9 93 448 71 421 9.04e-121 361
MsG0880046738.01.T01 AT1G53700 49.600 375 143 7 85 456 85 416 3.47e-117 353
MsG0880046738.01.T01 AT3G14370 43.207 449 207 7 9 455 9 411 3.64e-117 353
MsG0880046738.01.T01 AT5G58140 44.473 389 154 9 67 454 551 878 3.44e-105 334
MsG0880046738.01.T01 AT5G58140 44.473 389 154 9 67 454 551 878 3.44e-105 334
MsG0880046738.01.T01 AT5G58140 44.473 389 154 9 67 454 551 878 3.44e-105 334
MsG0880046738.01.T01 AT5G58140 44.473 389 154 9 67 454 551 878 3.44e-105 334
MsG0880046738.01.T01 AT5G58140 44.473 389 154 9 67 454 551 878 3.44e-105 334
MsG0880046738.01.T01 AT5G58140 44.531 384 151 9 67 449 551 873 3.33e-103 329
MsG0880046738.01.T01 AT3G45780 41.432 391 171 7 66 456 636 968 8.08e-94 306
MsG0880046738.01.T01 AT3G45780 41.432 391 171 7 66 456 636 968 8.08e-94 306
MsG0880046738.01.T01 AT1G51170 40.160 376 185 10 88 457 17 358 2.04e-73 238
MsG0880046738.01.T01 AT4G13000 36.802 394 187 12 88 472 15 355 2.82e-72 234
MsG0880046738.01.T01 AT3G20830 38.095 378 188 11 90 457 18 359 9.44e-67 220
MsG0880046738.01.T01 AT3G25250 37.209 387 177 11 89 458 11 348 7.21e-66 218
MsG0880046738.01.T01 AT1G48490 31.383 376 192 11 87 461 822 1132 1.70e-49 183
MsG0880046738.01.T01 AT1G48490 31.383 376 192 11 87 461 822 1132 1.70e-49 183
MsG0880046738.01.T01 AT1G48490 31.383 376 192 11 87 461 822 1132 1.70e-49 183
MsG0880046738.01.T01 AT1G48490 31.383 376 192 11 87 461 823 1133 1.78e-49 183
MsG0880046738.01.T01 AT1G45160 32.615 371 188 7 87 457 664 972 6.25e-49 181
MsG0880046738.01.T01 AT1G45160 32.615 371 188 7 87 457 664 972 7.83e-49 181
MsG0880046738.01.T01 AT3G17850 29.293 396 220 8 87 481 876 1212 2.97e-48 179
MsG0880046738.01.T01 AT1G30640 31.026 390 217 11 78 463 12 353 3.00e-48 173
MsG0880046738.01.T01 AT1G30640 31.026 390 217 11 78 463 105 446 1.19e-47 173
MsG0880046738.01.T01 AT1G30640 31.026 390 217 11 78 463 105 446 1.19e-47 173
MsG0880046738.01.T01 AT4G33080 30.081 369 211 10 81 445 82 407 3.68e-47 171
MsG0880046738.01.T01 AT4G33080 30.081 369 211 10 81 445 82 407 5.16e-47 171
MsG0880046738.01.T01 AT5G62310 29.383 405 222 12 60 458 715 1061 8.34e-45 169
MsG0880046738.01.T01 AT2G20470 29.815 379 212 10 81 457 112 438 1.66e-42 159
MsG0880046738.01.T01 AT3G23310 29.134 381 216 12 81 457 108 438 2.92e-42 158
MsG0880046738.01.T01 AT2G20470 29.815 379 212 10 81 457 112 438 3.23e-42 158
MsG0880046738.01.T01 AT2G20470 29.815 379 212 10 81 457 112 438 3.23e-42 158
MsG0880046738.01.T01 AT4G14350 29.319 382 214 12 81 458 107 436 1.27e-41 156
MsG0880046738.01.T01 AT4G14350 29.319 382 214 12 81 458 107 436 1.27e-41 156
MsG0880046738.01.T01 AT4G14350 29.319 382 214 12 81 458 107 436 1.27e-41 156
MsG0880046738.01.T01 AT4G14350 29.319 382 214 12 81 458 107 436 1.46e-41 156
MsG0880046738.01.T01 AT5G04510 29.080 337 162 6 124 459 70 330 1.51e-40 150
MsG0880046738.01.T01 AT5G04510 29.080 337 162 6 124 459 70 330 2.81e-40 152
MsG0880046738.01.T01 AT3G10540 28.783 337 163 6 124 459 71 331 1.09e-39 150
MsG0880046738.01.T01 AT5G09890 28.997 369 209 9 81 445 90 409 4.42e-39 149
MsG0880046738.01.T01 AT5G09890 28.997 369 209 9 81 445 90 409 4.53e-39 149
MsG0880046738.01.T01 AT1G03920 29.275 386 213 12 81 459 12 344 4.95e-39 147
MsG0880046738.01.T01 AT1G03920 29.275 386 213 12 81 459 125 457 1.77e-38 148
MsG0880046738.01.T01 AT1G03920 29.275 386 213 12 81 459 125 457 1.77e-38 148
MsG0880046738.01.T01 AT2G19400 28.108 370 216 9 82 445 94 419 4.12e-37 143
MsG0880046738.01.T01 AT5G58140 41.912 136 74 2 67 202 551 681 4.18e-30 124
MsG0880046738.01.T01 AT5G04510 27.365 296 139 5 124 419 70 289 6.55e-30 119
MsG0880046738.01.T01 AT3G08730 37.500 160 93 3 86 245 127 279 1.31e-24 106
MsG0880046738.01.T01 AT3G08730 42.537 134 61 6 329 456 287 410 9.80e-23 101
MsG0880046738.01.T01 AT3G08730 37.500 160 93 3 86 245 127 279 1.31e-24 106
MsG0880046738.01.T01 AT3G08730 42.537 134 61 6 329 456 287 410 9.80e-23 101
MsG0880046738.01.T01 AT3G08720 37.500 160 93 3 86 245 133 285 1.94e-24 106
MsG0880046738.01.T01 AT3G08720 40.602 133 66 5 329 458 293 415 8.58e-22 98.6
MsG0880046738.01.T01 AT3G08720 37.500 160 93 3 86 245 133 285 1.94e-24 106
MsG0880046738.01.T01 AT3G08720 40.602 133 66 5 329 458 293 415 8.58e-22 98.6
MsG0880046738.01.T01 AT3G08720 37.500 160 93 3 86 245 133 285 1.94e-24 106
MsG0880046738.01.T01 AT3G08720 40.602 133 66 5 329 458 293 415 8.58e-22 98.6
MsG0880046738.01.T01 AT3G08720 37.500 160 93 3 86 245 133 285 1.94e-24 106
MsG0880046738.01.T01 AT3G08720 40.602 133 66 5 329 458 293 415 8.58e-22 98.6
MsG0880046738.01.T01 AT2G20050 41.353 133 66 3 329 459 931 1053 1.14e-21 99.4
MsG0880046738.01.T01 AT2G20050 42.857 133 64 4 329 459 934 1056 1.25e-21 99.4
MsG0880046738.01.T01 AT2G45490 26.113 337 155 10 90 425 19 262 1.49e-19 89.4
MsG0880046738.01.T01 AT5G18700 33.735 166 93 5 90 253 1 151 8.86e-18 87.4
MsG0880046738.01.T01 AT2G45490 24.918 305 142 8 90 393 19 237 2.22e-15 76.3
MsG0880046738.01.T01 AT4G24400 28.571 189 114 6 93 281 9 176 1.02e-14 76.6
MsG0880046738.01.T01 AT4G24400 28.571 189 114 6 93 281 9 176 1.14e-14 76.6
MsG0880046738.01.T01 AT1G12680 31.013 158 94 4 91 247 105 248 2.05e-14 75.9
MsG0880046738.01.T01 AT5G45820 26.904 197 124 5 85 281 4 180 2.11e-14 75.5
MsG0880046738.01.T01 AT5G28290 28.481 158 104 4 90 245 1 151 3.06e-14 75.5
MsG0880046738.01.T01 AT5G28290 28.481 158 104 4 90 245 1 151 3.06e-14 75.5
MsG0880046738.01.T01 AT5G28290 28.481 158 104 4 90 245 1 151 3.23e-14 75.5
MsG0880046738.01.T01 AT4G32830 32.927 164 99 3 85 246 23 177 3.47e-14 73.6
MsG0880046738.01.T01 AT4G32830 34.021 97 57 1 329 425 182 271 8.58e-11 63.5
MsG0880046738.01.T01 AT2G34180 29.500 200 121 6 82 281 46 225 4.04e-14 75.1
MsG0880046738.01.T01 AT5G45810 28.125 192 118 5 90 281 25 196 1.13e-13 73.6
MsG0880046738.01.T01 AT2G26980 25.980 204 130 6 78 281 11 193 1.33e-13 73.2
MsG0880046738.01.T01 AT5G01810 22.449 343 177 8 85 427 4 257 1.46e-13 72.8
MsG0880046738.01.T01 AT2G26980 25.980 204 130 6 78 281 1 183 1.51e-13 73.2
MsG0880046738.01.T01 AT2G26980 25.980 204 130 6 78 281 1 183 1.61e-13 72.4
MsG0880046738.01.T01 AT5G01810 22.449 343 177 8 85 427 4 257 2.01e-13 72.4
MsG0880046738.01.T01 AT5G01810 22.449 343 177 8 85 427 4 257 2.01e-13 72.4
MsG0880046738.01.T01 AT3G04810 27.215 158 106 4 90 245 1 151 2.27e-13 72.8
MsG0880046738.01.T01 AT3G04810 27.215 158 106 4 90 245 1 151 2.27e-13 72.8
MsG0880046738.01.T01 AT3G04810 27.215 158 106 4 90 245 1 151 2.27e-13 72.8
MsG0880046738.01.T01 AT1G30270 26.455 189 120 5 93 281 31 200 2.87e-13 72.4
MsG0880046738.01.T01 AT2G26980 25.980 204 130 6 78 281 1 183 3.16e-13 72.0
MsG0880046738.01.T01 AT1G30270 26.455 189 120 5 93 281 31 200 3.25e-13 72.0
MsG0880046738.01.T01 AT2G26980 25.980 204 130 6 78 281 1 183 3.61e-13 70.1
MsG0880046738.01.T01 AT1G35670 31.250 160 99 5 91 246 24 176 4.11e-13 72.0
MsG0880046738.01.T01 AT2G25880 30.864 162 105 2 85 246 17 171 4.18e-13 70.1
MsG0880046738.01.T01 AT2G25880 33.673 98 58 1 329 426 176 266 2.15e-11 65.1
MsG0880046738.01.T01 AT3G17510 28.125 192 119 6 90 281 17 189 5.02e-13 71.2
MsG0880046738.01.T01 AT5G10930 26.131 199 126 8 84 281 3 181 6.18e-13 71.2
MsG0880046738.01.T01 AT2G25880 30.864 162 105 2 85 246 30 184 7.96e-13 69.7
MsG0880046738.01.T01 AT2G25880 33.673 98 58 1 329 426 189 279 1.65e-11 65.5
MsG0880046738.01.T01 AT1G54510 26.582 158 107 4 90 245 1 151 8.12e-13 71.2
MsG0880046738.01.T01 AT1G54510 26.582 158 107 4 90 245 1 151 8.12e-13 71.2
MsG0880046738.01.T01 AT1G54510 26.582 158 107 4 90 245 1 151 8.12e-13 71.2
MsG0880046738.01.T01 AT1G54510 26.582 158 107 4 90 245 1 151 8.12e-13 71.2
MsG0880046738.01.T01 AT4G18700 28.125 192 118 5 90 281 23 194 8.67e-13 70.9
MsG0880046738.01.T01 AT4G09570 31.250 160 99 5 91 246 23 175 1.06e-12 70.5
MsG0880046738.01.T01 AT5G25110 24.873 197 128 5 85 281 35 211 1.20e-12 70.5
MsG0880046738.01.T01 AT1G29230 28.125 192 118 5 90 281 71 242 1.36e-12 70.5
MsG0880046738.01.T01 AT2G25880 30.864 162 105 2 85 246 78 232 1.37e-12 69.3
MsG0880046738.01.T01 AT2G25880 33.673 98 58 1 329 426 237 327 3.96e-11 65.1
MsG0880046738.01.T01 AT5G57630 33.083 133 78 5 123 253 37 160 1.39e-12 69.7
MsG0880046738.01.T01 AT5G57630 31.056 161 89 7 123 281 37 177 1.40e-12 69.7
MsG0880046738.01.T01 AT1G08650 37.624 101 52 2 330 427 172 264 1.93e-12 68.2
MsG0880046738.01.T01 AT1G08650 37.624 101 52 2 330 427 172 264 2.12e-12 68.2
MsG0880046738.01.T01 AT1G01140 25.641 195 124 6 87 281 15 188 4.92e-12 68.2
MsG0880046738.01.T01 AT1G01140 25.641 195 124 6 87 281 15 188 5.13e-12 68.2
MsG0880046738.01.T01 AT5G21326 28.426 197 120 8 85 281 7 182 5.34e-12 68.2
MsG0880046738.01.T01 AT1G01140 25.641 195 124 6 87 281 15 188 5.74e-12 68.2
MsG0880046738.01.T01 AT3G04530 34.000 100 57 2 330 427 168 260 7.63e-12 66.2
MsG0880046738.01.T01 AT2G30360 27.979 193 113 6 93 281 21 191 8.15e-12 67.4
MsG0880046738.01.T01 AT3G23000 26.601 203 116 7 86 281 18 194 1.05e-11 67.4
MsG0880046738.01.T01 AT5G35410 28.025 157 97 3 125 281 38 178 1.07e-11 67.0
MsG0880046738.01.T01 AT2G38490 30.208 192 108 7 93 281 28 196 1.28e-11 67.0
MsG0880046738.01.T01 AT5G35410 28.025 157 97 3 125 281 38 178 1.46e-11 67.0
MsG0880046738.01.T01 AT2G25880 33.673 98 58 1 329 426 144 234 1.48e-11 65.1
MsG0880046738.01.T01 AT4G14580 27.919 197 122 6 86 281 14 191 2.49e-11 65.9
MsG0880046738.01.T01 AT5G58380 26.289 194 117 7 91 281 10 180 4.42e-11 65.5
MsG0880046738.01.T01 AT3G44200 26.380 163 111 4 90 249 5 161 4.77e-11 65.9
MsG0880046738.01.T01 AT3G44200 26.380 163 111 4 90 249 5 161 4.77e-11 65.9
MsG0880046738.01.T01 AT3G63280 26.582 158 107 4 90 245 1 151 5.82e-11 65.1
MsG0880046738.01.T01 AT3G63280 26.582 158 107 4 90 245 1 151 5.82e-11 65.1
MsG0880046738.01.T01 AT3G63280 26.582 158 107 4 90 245 1 151 5.82e-11 65.1
MsG0880046738.01.T01 AT2G46700 28.662 157 105 4 93 245 143 296 6.35e-11 65.1
MsG0880046738.01.T01 AT3G63280 26.582 158 107 4 90 245 55 205 8.53e-11 64.7
MsG0880046738.01.T01 AT5G66210 28.931 159 104 4 91 245 60 213 8.76e-11 64.3
MsG0880046738.01.T01 AT5G66210 28.931 159 104 4 91 245 60 213 8.76e-11 64.3
MsG0880046738.01.T01 AT5G66210 28.931 159 104 4 91 245 60 213 9.86e-11 64.3

Find 106 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAACTTCCAATTCTCTTATT+TGG 0.104650 8:-77568122 None:intergenic
AGAGATGGAGAAGGAGATTT+TGG 0.135883 8:+77566588 MsG0880046738.01.T01:CDS
TCATTACTCTTGTTTGGTTA+TGG 0.210794 8:+77566663 MsG0880046738.01.T01:CDS
TCATTATTCTCACCTTTAAA+TGG 0.217434 8:-77567975 None:intergenic
CTATCTTTCTTGCTTAATTT+AGG 0.246885 8:-77568269 None:intergenic
CGACTTGGAAGCGGCGATAT+AGG 0.269325 8:+77566451 MsG0880046738.01.T01:CDS
TTAGCACCAGAAGTTATATT+AGG 0.281277 8:+77567879 MsG0880046738.01.T01:CDS
TAAGAGAATTGGAAGTTGTT+TGG 0.283584 8:+77568127 MsG0880046738.01.T01:CDS
TATGGAAGAACACCATTTAA+AGG 0.284829 8:+77567963 MsG0880046738.01.T01:CDS
GACTTGGAAGCGGCGATATA+GGG 0.314753 8:+77566452 MsG0880046738.01.T01:CDS
TGCTTCTCATTACTCTTGTT+TGG 0.315005 8:+77566657 MsG0880046738.01.T01:CDS
TAAGATTAGGAATAGAGTTT+TGG 0.318605 8:+77568244 MsG0880046738.01.T01:CDS
AAGAGAATTGGAAGTTGTTT+GGG 0.326939 8:+77568128 MsG0880046738.01.T01:CDS
ATTGGTTCAGCTACAAAATC+AGG 0.339583 8:-77567816 None:intergenic
CGCCGCTTCCAAGTCGCTTA+AGG 0.364380 8:-77566444 None:intergenic
AAGAATCCAAATAAGAGAAT+TGG 0.366255 8:+77568116 MsG0880046738.01.T01:CDS
GCAACTTGGTTTGCCTTATG+AGG 0.367291 8:-77566358 None:intergenic
TTCTTGTCACTAGGAACCTC+AGG 0.376281 8:-77568221 None:intergenic
TTCAATATCTATGTAAGGTT+TGG 0.384816 8:-77566179 None:intergenic
TTATGCAGCTGAAACACTAT+TGG 0.390562 8:+77567467 MsG0880046738.01.T01:CDS
AGATCTTATAAGCAAATTGT+TGG 0.395181 8:+77568091 MsG0880046738.01.T01:CDS
AATTGATGTTTAAGCTGAAA+TGG 0.406023 8:-77568299 None:intergenic
TCTCTTACTAAAACATTCTC+TGG 0.406082 8:-77567537 None:intergenic
ATAGAGAAGCACTTGCTATA+AGG 0.417338 8:+77566548 MsG0880046738.01.T01:CDS
ATCCAGCTACGGGTTGATTC+AGG 0.423573 8:-77566238 None:intergenic
AAATGTTCAAGAAGAGTTTG+AGG 0.433930 8:+77567782 MsG0880046738.01.T01:CDS
CAGATAAGAAACCCTGTAGT+TGG 0.438439 8:+77566490 MsG0880046738.01.T01:CDS
GCTTGTCGCCAACGCCAGCC+TGG 0.445242 8:+77566712 MsG0880046738.01.T01:CDS
GAGGAGCTGCTGTCGTAGTC+AGG 0.447051 8:-77566202 None:intergenic
ACATACACCTCTTCTGTACT+AGG 0.447372 8:+77566322 MsG0880046738.01.T01:CDS
TCAGGTTCAATATCTATGTA+AGG 0.451180 8:-77566184 None:intergenic
GCAGTGGATTGGTGGACATT+TGG 0.454096 8:+77567918 MsG0880046738.01.T01:CDS
CCTTGTCCTAATATAACTTC+TGG 0.456195 8:-77567885 None:intergenic
GTCGCTTAAGGAGGCGGAAG+TGG 0.457883 8:-77566432 None:intergenic
AGCAAGATCAAAATCATTTG+TGG 0.461809 8:+77567842 MsG0880046738.01.T01:CDS
TTCCGCCTCCTTAAGCGACT+TGG 0.472352 8:+77566436 MsG0880046738.01.T01:CDS
GCAAGATCAAAATCATTTGT+GGG 0.479256 8:+77567843 MsG0880046738.01.T01:CDS
TACCTGAATCAACCCGTAGC+TGG 0.485635 8:+77566236 MsG0880046738.01.T01:CDS
CTAGTGACAAGAATAAGATT+AGG 0.493204 8:+77568231 MsG0880046738.01.T01:CDS
GATAATGAAAAGCGCTTCCC+AGG 0.495751 8:-77566730 None:intergenic
CACTGAGGCAAACCAACTAC+AGG 0.497046 8:-77566502 None:intergenic
AGAAGAGGTGTATGTGGTGG+TGG 0.497776 8:-77566314 None:intergenic
AAGAAACGGAGACGGAGCTT+CGG 0.498607 8:-77566291 None:intergenic
AGCGCTTCCCAGGCTGGCGT+TGG 0.504146 8:-77566720 None:intergenic
TAATTATGAGTTTGAAGAGA+TGG 0.506598 8:+77568058 MsG0880046738.01.T01:CDS
CAAGACAGAACTGGTTGCAT+GGG 0.507128 8:-77567702 None:intergenic
TTCCAAGTCGCTTAAGGAGG+CGG 0.508552 8:-77566438 None:intergenic
GGTAAGAAACAAGACAGAAC+TGG 0.508827 8:-77567711 None:intergenic
ATGAAAAGCGCTTCCCAGGC+TGG 0.509245 8:-77566726 None:intergenic
GAAAAGTCAAAGGTTGTTTG+AGG 0.510384 8:-77568016 None:intergenic
TCATAGCCTCCCATGCAACT+TGG 0.510555 8:-77566372 None:intergenic
CTTGTCGCCAACGCCAGCCT+GGG 0.511567 8:+77566713 MsG0880046738.01.T01:CDS
TGGATGAGTAACCTCAGCTT+CGG 0.512390 8:+77566256 MsG0880046738.01.T01:CDS
GAAGCTACAAAGAGCAGAGA+TGG 0.513111 8:+77566573 MsG0880046738.01.T01:CDS
TTCCAACGCTAAGCCTCATA+AGG 0.515710 8:+77566345 MsG0880046738.01.T01:CDS
CTCCTTAAGCGACTTGGAAG+CGG 0.516348 8:+77566442 MsG0880046738.01.T01:CDS
ACAAGACAGAACTGGTTGCA+TGG 0.516518 8:-77567703 None:intergenic
TCAAAATCAGTATACAAAGT+AGG 0.517482 8:-77566634 None:intergenic
CTAATCTTATTCTTGTCACT+AGG 0.518832 8:-77568230 None:intergenic
ACTAGAGTATCTACACATGA+TGG 0.520536 8:+77567491 MsG0880046738.01.T01:CDS
TTACTACTAACACCAATCCT+AGG 0.521295 8:-77568038 None:intergenic
TGAGGTTACTCATCCAGCTA+CGG 0.539825 8:-77566249 None:intergenic
GAGGTTACTCATCCAGCTAC+GGG 0.545283 8:-77566248 None:intergenic
ATGGAAGTGCAGTGGATTGG+TGG 0.547132 8:+77567910 MsG0880046738.01.T01:CDS
GTATGTGGTGGTGGAAGAAA+CGG 0.548796 8:-77566305 None:intergenic
TTCAGGTACGGTGATGGAAG+AGG 0.559712 8:-77566221 None:intergenic
CGACTCGACCTTGGTCGAGC+CGG 0.560840 8:-77566402 None:intergenic
GGTCGAGTCCGACTCGACCT+TGG 0.560883 8:-77566411 None:intergenic
GGCAAACCAAGTTGCATGGG+AGG 0.562597 8:+77566366 MsG0880046738.01.T01:CDS
CGCTTCCAAGTCGCTTAAGG+AGG 0.566941 8:-77566441 None:intergenic
TGCCTTATGAGGCTTAGCGT+TGG 0.567734 8:-77566347 None:intergenic
TGAGAATAATGAGAAAACAT+TGG 0.570745 8:+77567986 MsG0880046738.01.T01:CDS
GGTTGATTCAGGTACGGTGA+TGG 0.577257 8:-77566227 None:intergenic
TAAGGCAAACCAAGTTGCAT+GGG 0.586093 8:+77566363 MsG0880046738.01.T01:CDS
ATAAGGCAAACCAAGTTGCA+TGG 0.590080 8:+77566362 MsG0880046738.01.T01:CDS
CGGAGACGGAGCTTCGGCGA+CGG 0.591780 8:-77566285 None:intergenic
GTTATATTAGGACAAGGTCA+TGG 0.596123 8:+77567891 MsG0880046738.01.T01:CDS
TAGTACAGAAGAGGTGTATG+TGG 0.597102 8:-77566320 None:intergenic
TCTTGTCACTAGGAACCTCA+GGG 0.600591 8:-77568220 None:intergenic
CTAGAGTATCTACACATGAT+GGG 0.602972 8:+77567492 MsG0880046738.01.T01:CDS
GTCATGGAAGTGCAGTGGAT+TGG 0.604377 8:+77567907 MsG0880046738.01.T01:CDS
AGTCGACTCCGGCTCGACCA+AGG 0.606976 8:+77566394 MsG0880046738.01.T01:CDS
ACAAAGAGCAGAGATGGAGA+AGG 0.609995 8:+77566579 MsG0880046738.01.T01:CDS
TATGTAAGGTTTGGTGATGG+TGG 0.612123 8:-77566170 None:intergenic
GACGGCGGCTTCCGAAGCTG+AGG 0.616563 8:-77566267 None:intergenic
AGACGGAGCTTCGGCGACGG+CGG 0.619092 8:-77566282 None:intergenic
CGGCTCGACCAAGGTCGAGT+CGG 0.626857 8:+77566403 MsG0880046738.01.T01:CDS
AAGACAGAACTGGTTGCATG+GGG 0.627836 8:-77567701 None:intergenic
ACAAGGTCATGGAAGTGCAG+TGG 0.630518 8:+77567902 MsG0880046738.01.T01:CDS
AGGTTTGGTGATGGTGGCCA+TGG 0.631006 8:-77566164 None:intergenic
CAAGATCAAAATCATTTGTG+GGG 0.639484 8:+77567844 MsG0880046738.01.T01:CDS
CAAGCATACAAATCACCACC+AGG 0.639865 8:-77566694 None:intergenic
CCAGAAGTTATATTAGGACA+AGG 0.641637 8:+77567885 MsG0880046738.01.T01:CDS
CCAATCCTAGGAAAAGTCAA+AGG 0.642603 8:-77568026 None:intergenic
GCTACGGGTTGATTCAGGTA+CGG 0.644920 8:-77566233 None:intergenic
GTTGGAACCTAGTACAGAAG+AGG 0.654189 8:-77566329 None:intergenic
ATCTATGTAAGGTTTGGTGA+TGG 0.663222 8:-77566173 None:intergenic
GGGAGGCTATGAGTCGACTC+CGG 0.665447 8:+77566383 MsG0880046738.01.T01:CDS
ATGTTAACTAGCACTTACCA+TGG 0.668868 8:+77566147 None:intergenic
ACTGAGGCAAACCAACTACA+GGG 0.691651 8:-77566501 None:intergenic
GGTGGTGGAAGAAACGGAGA+CGG 0.694142 8:-77566299 None:intergenic
TTGTCACTAGGAACCTCAGG+GGG 0.705548 8:-77568218 None:intergenic
CTTGTCACTAGGAACCTCAG+GGG 0.731271 8:-77568219 None:intergenic
TACAGAAGAGGTGTATGTGG+TGG 0.741171 8:-77566317 None:intergenic
TTCATAGCATAGAAACACTG+AGG 0.749139 8:-77566517 None:intergenic
AGACAGAACTGGTTGCATGG+GGG 0.753672 8:-77567700 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAAAACATAATTATAAA+AGG + Chr8:77567249-77567268 MsG0880046738.01.T01:intron 10.0%
!!! AAAATGACTTTTTATAATTA+TGG + Chr8:77567349-77567368 MsG0880046738.01.T01:intron 10.0%
!! AAAAAAAAAATGAACTTACT+TGG - Chr8:77566761-77566780 None:intergenic 15.0%
!! ACTAGTAATAACTAATAATT+AGG + Chr8:77567306-77567325 MsG0880046738.01.T01:intron 15.0%
!!! TTTTTGTATGAAATGTTATA+TGG + Chr8:77567945-77567964 MsG0880046738.01.T01:CDS 15.0%
!!! AAAAGACATGAGTTTTTTAA+GGG + Chr8:77568164-77568183 MsG0880046738.01.T01:CDS 20.0%
!!! TAAAAGACATGAGTTTTTTA+AGG + Chr8:77568163-77568182 MsG0880046738.01.T01:CDS 20.0%
! AAAAAAATGAACTTACTTGG+AGG - Chr8:77566758-77566777 None:intergenic 25.0%
! AAACCATATTAGAATCAAGT+AGG - Chr8:77567082-77567101 None:intergenic 25.0%
! AACCATATTAGAATCAAGTA+GGG - Chr8:77567081-77567100 None:intergenic 25.0%
! AAGAATCCAAATAAGAGAAT+TGG + Chr8:77568116-77568135 MsG0880046738.01.T01:CDS 25.0%
! AATGGAAAATATAGATATCC+TGG + Chr8:77567026-77567045 MsG0880046738.01.T01:intron 25.0%
! AATTGATGTTTAAGCTGAAA+TGG - Chr8:77568302-77568321 None:intergenic 25.0%
! ACAATTTATGTCTTGTCATA+AGG + Chr8:77566959-77566978 MsG0880046738.01.T01:intron 25.0%
! AGATCTTATAAGCAAATTGT+TGG + Chr8:77568091-77568110 MsG0880046738.01.T01:CDS 25.0%
! ATGAAGAATGAACATGTATA+AGG - Chr8:77566791-77566810 None:intergenic 25.0%
! ATGGAAAATATAGATATCCT+GGG + Chr8:77567027-77567046 MsG0880046738.01.T01:intron 25.0%
! CTATCTTTCTTGCTTAATTT+AGG - Chr8:77568272-77568291 None:intergenic 25.0%
! TAATTATGAGTTTGAAGAGA+TGG + Chr8:77568058-77568077 MsG0880046738.01.T01:CDS 25.0%
! TCAAAATCAGTATACAAAGT+AGG - Chr8:77566637-77566656 None:intergenic 25.0%
! TCATTATTCTCACCTTTAAA+TGG - Chr8:77567978-77567997 None:intergenic 25.0%
! TGAGAATAATGAGAAAACAT+TGG + Chr8:77567986-77568005 MsG0880046738.01.T01:CDS 25.0%
! TTCAATATCTATGTAAGGTT+TGG - Chr8:77566182-77566201 None:intergenic 25.0%
!! AAAAAGCTTTGTACCTATTA+TGG - Chr8:77567159-77567178 None:intergenic 25.0%
!! TAAGATTAGGAATAGAGTTT+TGG + Chr8:77568244-77568263 MsG0880046738.01.T01:CDS 25.0%
!! TACCTATTATGGTGTTAAAT+AGG - Chr8:77567148-77567167 None:intergenic 25.0%
!!! AATGTTTTAGTAAGAGAAGA+TGG + Chr8:77567543-77567562 MsG0880046738.01.T01:CDS 25.0%
!!! AGTTTTTTAAGGGTGTTAAT+TGG + Chr8:77568174-77568193 MsG0880046738.01.T01:CDS 25.0%
!!! GTTTTTTAAGGGTGTTAATT+GGG + Chr8:77568175-77568194 MsG0880046738.01.T01:CDS 25.0%
!!! TTCTTTTTCTTTGTTGATGA+TGG - Chr8:77567735-77567754 None:intergenic 25.0%
AAATGTTCAAGAAGAGTTTG+AGG + Chr8:77567782-77567801 MsG0880046738.01.T01:CDS 30.0%
AAGAGAATTGGAAGTTGTTT+GGG + Chr8:77568128-77568147 MsG0880046738.01.T01:CDS 30.0%
AGCAAGATCAAAATCATTTG+TGG + Chr8:77567842-77567861 MsG0880046738.01.T01:CDS 30.0%
CAACTTCCAATTCTCTTATT+TGG - Chr8:77568125-77568144 None:intergenic 30.0%
CAAGATCAAAATCATTTGTG+GGG + Chr8:77567844-77567863 MsG0880046738.01.T01:CDS 30.0%
CACTCATTTGAAAACAACAT+AGG - Chr8:77567000-77567019 None:intergenic 30.0%
CTAATCTTATTCTTGTCACT+AGG - Chr8:77568233-77568252 None:intergenic 30.0%
CTAGTGACAAGAATAAGATT+AGG + Chr8:77568231-77568250 MsG0880046738.01.T01:CDS 30.0%
GACCTATTTAACACCATAAT+AGG + Chr8:77567143-77567162 MsG0880046738.01.T01:intron 30.0%
GATATTAACCAATTACGAAC+AGG + Chr8:77567442-77567461 MsG0880046738.01.T01:intron 30.0%
GCAAGATCAAAATCATTTGT+GGG + Chr8:77567843-77567862 MsG0880046738.01.T01:CDS 30.0%
GTATACAAAGTAGGCAAAAA+AGG - Chr8:77566628-77566647 None:intergenic 30.0%
TAAGAGAATTGGAAGTTGTT+TGG + Chr8:77568127-77568146 MsG0880046738.01.T01:CDS 30.0%
TATGGAAGAACACCATTTAA+AGG + Chr8:77567963-77567982 MsG0880046738.01.T01:CDS 30.0%
TCAGGTTCAATATCTATGTA+AGG - Chr8:77566187-77566206 None:intergenic 30.0%
TCTCTTACTAAAACATTCTC+TGG - Chr8:77567540-77567559 None:intergenic 30.0%
TTAGCACCAGAAGTTATATT+AGG + Chr8:77567879-77567898 MsG0880046738.01.T01:CDS 30.0%
TTCAAATGAGTGTTTGTGAA+TGG + Chr8:77567008-77567027 MsG0880046738.01.T01:intron 30.0%
! CTATTTATATTAGAGAGCGT+AGG + Chr8:77566922-77566941 MsG0880046738.01.T01:intron 30.0%
! TCATTACTCTTGTTTGGTTA+TGG + Chr8:77566663-77566682 MsG0880046738.01.T01:CDS 30.0%
!! GATTTTGATCTTGCTTCAAT+TGG - Chr8:77567837-77567856 None:intergenic 30.0%
ATACAAGAGACAAAAATCCC+AGG - Chr8:77567047-77567066 None:intergenic 35.0%
CCAGAAGTTATATTAGGACA+AGG + Chr8:77567885-77567904 MsG0880046738.01.T01:CDS 35.0%
CCTTGTCCTAATATAACTTC+TGG - Chr8:77567888-77567907 None:intergenic 35.0%
GAAAAGTCAAAGGTTGTTTG+AGG - Chr8:77568019-77568038 None:intergenic 35.0%
GCATAAAACCTGTTCGTAAT+TGG - Chr8:77567453-77567472 None:intergenic 35.0%
GTTATATTAGGACAAGGTCA+TGG + Chr8:77567891-77567910 MsG0880046738.01.T01:CDS 35.0%
TGCTTCTCATTACTCTTGTT+TGG + Chr8:77566657-77566676 MsG0880046738.01.T01:CDS 35.0%
TGTCTCTTGTATGGTTCATA+AGG + Chr8:77567055-77567074 MsG0880046738.01.T01:intron 35.0%
TTACTACTAACACCAATCCT+AGG - Chr8:77568041-77568060 None:intergenic 35.0%
TTATGCAGCTGAAACACTAT+TGG + Chr8:77567467-77567486 MsG0880046738.01.T01:CDS 35.0%
TTCATAGCATAGAAACACTG+AGG - Chr8:77566520-77566539 None:intergenic 35.0%
! ACTAGAGTATCTACACATGA+TGG + Chr8:77567491-77567510 MsG0880046738.01.T01:CDS 35.0%
! ATTGGTTCAGCTACAAAATC+AGG - Chr8:77567819-77567838 None:intergenic 35.0%
! CTAGAGTATCTACACATGAT+GGG + Chr8:77567492-77567511 MsG0880046738.01.T01:CDS 35.0%
! GTTTTGCTTCTTAAGAGCTT+TGG - Chr8:77567618-77567637 None:intergenic 35.0%
! TGGGATTTTTGTCTCTTGTA+TGG + Chr8:77567046-77567065 MsG0880046738.01.T01:intron 35.0%
!! AACAACCTTTGACTTTTCCT+AGG + Chr8:77568021-77568040 MsG0880046738.01.T01:CDS 35.0%
!! ATAGAGAAGCACTTGCTATA+AGG + Chr8:77566548-77566567 MsG0880046738.01.T01:CDS 35.0%
!! ATCTATGTAAGGTTTGGTGA+TGG - Chr8:77566176-77566195 None:intergenic 35.0%
ACATACACCTCTTCTGTACT+AGG + Chr8:77566322-77566341 MsG0880046738.01.T01:CDS 40.0%
ATAAGGCAAACCAAGTTGCA+TGG + Chr8:77566362-77566381 MsG0880046738.01.T01:CDS 40.0%
CAGATAAGAAACCCTGTAGT+TGG + Chr8:77566490-77566509 MsG0880046738.01.T01:CDS 40.0%
CCAATCCTAGGAAAAGTCAA+AGG - Chr8:77568029-77568048 None:intergenic 40.0%
GGCCCTACTTGATTCTAATA+TGG + Chr8:77567076-77567095 MsG0880046738.01.T01:intron 40.0%
GGTAAGAAACAAGACAGAAC+TGG - Chr8:77567714-77567733 None:intergenic 40.0%
TAAGGCAAACCAAGTTGCAT+GGG + Chr8:77566363-77566382 MsG0880046738.01.T01:CDS 40.0%
! AGAGATGGAGAAGGAGATTT+TGG + Chr8:77566588-77566607 MsG0880046738.01.T01:CDS 40.0%
! AGATGGAGAAGGAGATTTTG+GGG + Chr8:77566590-77566609 MsG0880046738.01.T01:CDS 40.0%
! GAGATGGAGAAGGAGATTTT+GGG + Chr8:77566589-77566608 MsG0880046738.01.T01:CDS 40.0%
! TAGTACAGAAGAGGTGTATG+TGG - Chr8:77566323-77566342 None:intergenic 40.0%
!! CCTTTGACTTTTCCTAGGAT+TGG + Chr8:77568026-77568045 MsG0880046738.01.T01:CDS 40.0%
!! TATGTAAGGTTTGGTGATGG+TGG - Chr8:77566173-77566192 None:intergenic 40.0%
!! TTGGTTATGGAGTTTTGTCC+TGG + Chr8:77566676-77566695 MsG0880046738.01.T01:CDS 40.0%
AAGACAGAACTGGTTGCATG+GGG - Chr8:77567704-77567723 None:intergenic 45.0%
ACAAAGAGCAGAGATGGAGA+AGG + Chr8:77566579-77566598 MsG0880046738.01.T01:CDS 45.0%
ACAAGACAGAACTGGTTGCA+TGG - Chr8:77567706-77567725 None:intergenic 45.0%
ACTGAGGCAAACCAACTACA+GGG - Chr8:77566504-77566523 None:intergenic 45.0%
CAAGACAGAACTGGTTGCAT+GGG - Chr8:77567705-77567724 None:intergenic 45.0%
CAAGCATACAAATCACCACC+AGG - Chr8:77566697-77566716 None:intergenic 45.0%
GAAGCTACAAAGAGCAGAGA+TGG + Chr8:77566573-77566592 MsG0880046738.01.T01:CDS 45.0%
GTTGGAACCTAGTACAGAAG+AGG - Chr8:77566332-77566351 None:intergenic 45.0%
TCTTGTCACTAGGAACCTCA+GGG - Chr8:77568223-77568242 None:intergenic 45.0%
TGAGGTTACTCATCCAGCTA+CGG - Chr8:77566252-77566271 None:intergenic 45.0%
TGGATGAGTAACCTCAGCTT+CGG + Chr8:77566256-77566275 MsG0880046738.01.T01:CDS 45.0%
TTCCAACGCTAAGCCTCATA+AGG + Chr8:77566345-77566364 MsG0880046738.01.T01:CDS 45.0%
TTCTTGTCACTAGGAACCTC+AGG - Chr8:77568224-77568243 None:intergenic 45.0%
! TACAGAAGAGGTGTATGTGG+TGG - Chr8:77566320-77566339 None:intergenic 45.0%
!! GATAATGAAAAGCGCTTCCC+AGG - Chr8:77566733-77566752 None:intergenic 45.0%
!! GCAACTTGGTTTGCCTTATG+AGG - Chr8:77566361-77566380 None:intergenic 45.0%
!! GTATGTGGTGGTGGAAGAAA+CGG - Chr8:77566308-77566327 None:intergenic 45.0%
!! GTTATGGAGTTTTGTCCTGG+TGG + Chr8:77566679-77566698 MsG0880046738.01.T01:CDS 45.0%
!! AAAAAAAACATAATTATAAA+AGG - Chr8:77567275-77567294 None:intergenic 5.0%
!!! TATAATTATGTTTTTTTTTA+TGG + Chr8:77567277-77567296 MsG0880046738.01.T01:intron 5.0%
AAGAAACGGAGACGGAGCTT+CGG - Chr8:77566294-77566313 None:intergenic 50.0%
AGACAGAACTGGTTGCATGG+GGG - Chr8:77567703-77567722 None:intergenic 50.0%
CACTGAGGCAAACCAACTAC+AGG - Chr8:77566505-77566524 None:intergenic 50.0%
CTTGTCACTAGGAACCTCAG+GGG - Chr8:77568222-77568241 None:intergenic 50.0%
GACTTGGAAGCGGCGATATA+GGG + Chr8:77566452-77566471 MsG0880046738.01.T01:CDS 50.0%
GAGGTTACTCATCCAGCTAC+GGG - Chr8:77566251-77566270 None:intergenic 50.0%
TACCTGAATCAACCCGTAGC+TGG + Chr8:77566236-77566255 MsG0880046738.01.T01:CDS 50.0%
TAGATCAGTTAGACCCCCTG+AGG + Chr8:77568205-77568224 MsG0880046738.01.T01:CDS 50.0%
TCATAGCCTCCCATGCAACT+TGG - Chr8:77566375-77566394 None:intergenic 50.0%
TGCATGGGGGAAATGCAAGA+AGG - Chr8:77567690-77567709 None:intergenic 50.0%
TGCCTTATGAGGCTTAGCGT+TGG - Chr8:77566350-77566369 None:intergenic 50.0%
TTCCAAGTCGCTTAAGGAGG+CGG - Chr8:77566441-77566460 None:intergenic 50.0%
TTGTCACTAGGAACCTCAGG+GGG - Chr8:77568221-77568240 None:intergenic 50.0%
! ACAAGGTCATGGAAGTGCAG+TGG + Chr8:77567902-77567921 MsG0880046738.01.T01:CDS 50.0%
! AGAAGAGGTGTATGTGGTGG+TGG - Chr8:77566317-77566336 None:intergenic 50.0%
! CTCCTTAAGCGACTTGGAAG+CGG + Chr8:77566442-77566461 MsG0880046738.01.T01:CDS 50.0%
! GGTTGATTCAGGTACGGTGA+TGG - Chr8:77566230-77566249 None:intergenic 50.0%
! GTCATGGAAGTGCAGTGGAT+TGG + Chr8:77567907-77567926 MsG0880046738.01.T01:CDS 50.0%
!! ATCCAGCTACGGGTTGATTC+AGG - Chr8:77566241-77566260 None:intergenic 50.0%
!! ATGGAAGTGCAGTGGATTGG+TGG + Chr8:77567910-77567929 MsG0880046738.01.T01:CDS 50.0%
!! GCAGTGGATTGGTGGACATT+TGG + Chr8:77567918-77567937 MsG0880046738.01.T01:CDS 50.0%
!! GCTACGGGTTGATTCAGGTA+CGG - Chr8:77566236-77566255 None:intergenic 50.0%
!! TTCAGGTACGGTGATGGAAG+AGG - Chr8:77566224-77566243 None:intergenic 50.0%
CGCTTCCAAGTCGCTTAAGG+AGG - Chr8:77566444-77566463 None:intergenic 55.0%
GGCAAACCAAGTTGCATGGG+AGG + Chr8:77566366-77566385 MsG0880046738.01.T01:CDS 55.0%
TTCCGCCTCCTTAAGCGACT+TGG + Chr8:77566436-77566455 MsG0880046738.01.T01:CDS 55.0%
! CGACTTGGAAGCGGCGATAT+AGG + Chr8:77566451-77566470 MsG0880046738.01.T01:CDS 55.0%
!! AGGTTTGGTGATGGTGGCCA+TGG - Chr8:77566167-77566186 None:intergenic 55.0%
!! ATGAAAAGCGCTTCCCAGGC+TGG - Chr8:77566729-77566748 None:intergenic 55.0%
!! GGTGGTGGAAGAAACGGAGA+CGG - Chr8:77566302-77566321 None:intergenic 55.0%
CGCCGCTTCCAAGTCGCTTA+AGG - Chr8:77566447-77566466 None:intergenic 60.0%
GAGGAGCTGCTGTCGTAGTC+AGG - Chr8:77566205-77566224 None:intergenic 60.0%
GTCGCTTAAGGAGGCGGAAG+TGG - Chr8:77566435-77566454 None:intergenic 60.0%
! GGGAGGCTATGAGTCGACTC+CGG + Chr8:77566383-77566402 MsG0880046738.01.T01:CDS 60.0%
CGACTCGACCTTGGTCGAGC+CGG - Chr8:77566405-77566424 None:intergenic 65.0%
CGGCTCGACCAAGGTCGAGT+CGG + Chr8:77566403-77566422 MsG0880046738.01.T01:CDS 65.0%
CTTGTCGCCAACGCCAGCCT+GGG + Chr8:77566713-77566732 MsG0880046738.01.T01:CDS 65.0%
! AGTCGACTCCGGCTCGACCA+AGG + Chr8:77566394-77566413 MsG0880046738.01.T01:CDS 65.0%
! GGTCGAGTCCGACTCGACCT+TGG - Chr8:77566414-77566433 None:intergenic 65.0%
AGACGGAGCTTCGGCGACGG+CGG - Chr8:77566285-77566304 None:intergenic 70.0%
AGCGCTTCCCAGGCTGGCGT+TGG - Chr8:77566723-77566742 None:intergenic 70.0%
CGGAGACGGAGCTTCGGCGA+CGG - Chr8:77566288-77566307 None:intergenic 70.0%
GACGGCGGCTTCCGAAGCTG+AGG - Chr8:77566270-77566289 None:intergenic 70.0%
GCTTGTCGCCAACGCCAGCC+TGG + Chr8:77566712-77566731 MsG0880046738.01.T01:CDS 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 77566160 77568334 77566160 ID=MsG0880046738.01;Name=MsG0880046738.01
Chr8 mRNA 77566160 77568334 77566160 ID=MsG0880046738.01.T01;Parent=MsG0880046738.01;Name=MsG0880046738.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|490
Chr8 exon 77566160 77566761 77566160 ID=MsG0880046738.01.T01:exon:33181;Parent=MsG0880046738.01.T01
Chr8 exon 77567464 77568334 77567464 ID=MsG0880046738.01.T01:exon:33182;Parent=MsG0880046738.01.T01
Chr8 CDS 77566160 77566761 77566160 ID=MsG0880046738.01.T01:cds;Parent=MsG0880046738.01.T01
Chr8 CDS 77567464 77568334 77567464 ID=MsG0880046738.01.T01:cds;Parent=MsG0880046738.01.T01
Gene Sequence

>MsG0880046738.01.T01

CTTACCATGGCCACCATCACCAAACCTTACATAGATATTGAACCTGACTACGACAGCAGCTCCTCTTCCATCACCGTACCTGAATCAACCCGTAGCTGGATGAGTAACCTCAGCTTCGGAAGCCGCCGTCGCCGAAGCTCCGTCTCCGTTTCTTCCACCACCACATACACCTCTTCTGTACTAGGTTCCAACGCTAAGCCTCATAAGGCAAACCAAGTTGCATGGGAGGCTATGAGTCGACTCCGGCTCGACCAAGGTCGAGTCGGACTCGACCACTTCCGCCTCCTTAAGCGACTTGGAAGCGGCGATATAGGGAATGTTTATCTTTGTCAGATAAGAAACCCTGTAGTTGGTTTGCCTCAGTGTTTCTATGCTATGAAAGTTGTTGATAGAGAAGCACTTGCTATAAGGAAGAAGCTACAAAGAGCAGAGATGGAGAAGGAGATTTTGGGGATGCTTGATCATCCTTTTTTGCCTACTTTGTATACTGATTTTGATGCTTCTCATTACTCTTGTTTGGTTATGGAGTTTTGTCCTGGTGGTGATTTGTATGCTTGTCGCCAACGCCAGCCTGGGAAGCGCTTTTCATTATCATCCTCCAAGTTTTATGCAGCTGAAACACTATTGGCACTAGAGTATCTACACATGATGGGAATAGTATACAGAGATTTAAAGCCAGAGAATGTTTTAGTAAGAGAAGATGGACACATAATGCTTTCAGATTTTGATCTTTCACTCAAATGTGACGTTGTTCCAAAGCTCTTAAGAAGCAAAACAAGATTAGAACGAAGTATCAAAACAACTACTACAATGAGATGTTCAACACCTTCTTGCATTTCCCCCATGCAACCAGTTCTGTCTTGTTTCTTACCATCATCAACAAAGAAAAAGAAAACTAAACTTGAAACTGTTATTAGAGAAAATGTTCAAGAAGAGTTTGAGGTTGATCTTGATCCTGATTTTGTAGCTGAACCAATTGAAGCAAGATCAAAATCATTTGTGGGGACACATGAATATTTAGCACCAGAAGTTATATTAGGACAAGGTCATGGAAGTGCAGTGGATTGGTGGACATTTGGTGTTTTTTTGTATGAAATGTTATATGGAAGAACACCATTTAAAGGTGAGAATAATGAGAAAACATTGGTTAATATCCTCAAACAACCTTTGACTTTTCCTAGGATTGGTGTTAGTAGTAATTATGAGTTTGAAGAGATGGTGAAAGTTCAAGATCTTATAAGCAAATTGTTGGTGAAGAATCCAAATAAGAGAATTGGAAGTTGTTTGGGTTCTGTTGAGATTAAAAGACATGAGTTTTTTAAGGGTGTTAATTGGGCTTTGATTAGATCAGTTAGACCCCCTGAGGTTCCTAGTGACAAGAATAAGATTAGGAATAGAGTTTTGGTGCCTAAATTAAGCAAGAAAGATAGAGATCAACCATTTCAGCTTAAACATCAATTTGATTACTTCTAA

Protein sequence

>MsG0880046738.01.T01

LTMATITKPYIDIEPDYDSSSSSITVPESTRSWMSNLSFGSRRRRSSVSVSSTTTYTSSVLGSNAKPHKANQVAWEAMSRLRLDQGRVGLDHFRLLKRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRKKLQRAEMEKEILGMLDHPFLPTLYTDFDASHYSCLVMEFCPGGDLYACRQRQPGKRFSLSSSKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRLERSIKTTTTMRCSTPSCISPMQPVLSCFLPSSTKKKKTKLETVIRENVQEEFEVDLDPDFVAEPIEARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLYGRTPFKGENNEKTLVNILKQPLTFPRIGVSSNYEFEEMVKVQDLISKLLVKNPNKRIGSCLGSVEIKRHEFFKGVNWALIRSVRPPEVPSDKNKIRNRVLVPKLSKKDRDQPFQLKHQFDYF*