AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0880047750.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047750.01.T01 MTR_4g133490 91.954 348 28 0 255 602 1 348 0.0 634
MsG0880047750.01.T01 MTR_4g133320 92.532 308 23 0 295 602 1 308 0.0 558
MsG0880047750.01.T01 MTR_3g006010 59.641 446 148 4 185 599 22 466 1.56e-177 511
MsG0880047750.01.T01 MTR_3g006120 69.971 343 97 2 261 599 9 349 6.92e-170 487
MsG0880047750.01.T01 MTR_4g133300 91.633 251 21 0 1 251 1 251 2.29e-167 476
MsG0880047750.01.T01 MTR_3g006100 69.096 343 102 2 261 600 9 350 1.23e-166 479
MsG0880047750.01.T01 MTR_4g133470 90.837 251 23 0 1 251 1 251 8.65e-166 473
MsG0880047750.01.T01 MTR_3g006140 65.156 353 121 1 251 601 21 373 1.04e-163 472
MsG0880047750.01.T01 MTR_3g006180 68.142 339 104 2 266 601 1 338 2.09e-161 465
MsG0880047750.01.T01 MTR_6g091830 52.889 450 185 9 175 602 11 455 1.56e-153 449
MsG0880047750.01.T01 MTR_6g092140 52.667 450 186 9 175 602 11 455 2.73e-152 446
MsG0880047750.01.T01 MTR_3g068220 61.732 358 122 5 254 600 2 355 9.19e-138 405
MsG0880047750.01.T01 MTR_7g083950 52.928 444 181 12 167 602 9 432 5.08e-132 393
MsG0880047750.01.T01 MTR_7g070100 60.286 350 133 4 255 601 3 349 3.29e-130 385
MsG0880047750.01.T01 MTR_6g088340 45.929 479 187 11 150 602 1 433 7.77e-128 383
MsG0880047750.01.T01 MTR_3g045700 58.074 353 140 5 254 602 2 350 6.78e-124 369
MsG0880047750.01.T01 MTR_6g011110 59.431 281 98 4 334 602 1 277 1.84e-103 314
MsG0880047750.01.T01 MTR_1g100280 51.781 365 134 7 247 601 4 336 1.22e-101 312
MsG0880047750.01.T01 MTR_3g085910 52.322 323 95 4 256 568 3 276 1.16e-100 307
MsG0880047750.01.T01 MTR_3g086480 58.755 257 98 5 341 594 2 253 6.38e-87 271
MsG0880047750.01.T01 MTR_1g109340 55.311 273 115 3 332 601 86 354 1.09e-86 274
MsG0880047750.01.T01 MTR_1g109340 43.220 118 42 4 175 291 13 106 3.75e-15 77.8
MsG0880047750.01.T01 MTR_2g097830 93.578 109 7 0 1 109 59 167 1.92e-66 214
MsG0880047750.01.T01 MTR_2g097830 34.286 140 81 4 56 192 36 167 5.12e-12 65.1
MsG0880047750.01.T01 MTR_1g109520 57.595 158 61 1 450 601 19 176 2.63e-49 169
MsG0880047750.01.T01 MTR_1g089085 53.086 162 71 3 235 395 18 175 6.34e-44 155
MsG0880047750.01.T01 MTR_1g089620 61.905 126 45 1 431 556 34 156 1.20e-41 152
MsG0880047750.01.T01 MTR_1g012330 59.124 137 56 0 334 470 1 137 7.15e-41 149
MsG0880047750.01.T01 MTR_1g109090 55.814 129 55 2 249 375 8 136 5.15e-37 135
MsG0880047750.01.T01 MTR_1g106050 65.741 108 35 1 255 360 1 108 7.25e-37 134
MsG0880047750.01.T01 MTR_1g104960 42.767 159 88 1 89 244 13 171 5.50e-33 125
MsG0880047750.01.T01 MTR_1g104960 43.103 174 87 4 1 163 1 173 3.34e-30 117
MsG0880047750.01.T01 MTR_3g006185 45.614 171 85 4 83 245 2 172 2.73e-31 120
MsG0880047750.01.T01 MTR_3g006185 41.611 149 77 2 25 163 25 173 3.57e-26 105
MsG0880047750.01.T01 MTR_3g006125 42.328 189 98 5 66 245 68 254 1.09e-30 121
MsG0880047750.01.T01 MTR_3g006125 43.056 144 71 2 25 157 106 249 9.24e-26 107
MsG0880047750.01.T01 MTR_0128s0040 47.761 134 68 2 285 418 3 134 1.52e-30 116
MsG0880047750.01.T01 MTR_3g006150 45.752 153 77 3 12 158 8 160 2.33e-30 117
MsG0880047750.01.T01 MTR_3g006150 46.497 157 76 5 89 241 8 160 3.50e-28 110
MsG0880047750.01.T01 MTR_3g006065 46.405 153 76 3 12 158 8 160 2.43e-30 118
MsG0880047750.01.T01 MTR_3g006065 40.957 188 102 4 83 267 2 183 2.89e-28 112
MsG0880047750.01.T01 MTR_3g006065 50.877 57 28 0 25 81 107 163 9.19e-12 64.7
MsG0880047750.01.T01 MTR_7g013380 33.913 230 141 5 25 244 31 259 2.92e-29 118
MsG0880047750.01.T01 MTR_7g013380 36.301 146 87 2 25 164 117 262 3.75e-20 91.7
MsG0880047750.01.T01 MTR_7g013380 34.270 178 105 6 90 256 14 190 2.59e-18 86.3
MsG0880047750.01.T01 MTR_1g105955 41.772 158 78 2 88 240 15 163 7.44e-29 113
MsG0880047750.01.T01 MTR_1g105955 44.595 148 72 3 13 154 17 160 6.72e-26 105
MsG0880047750.01.T01 MTR_1g105955 47.222 72 35 1 8 76 91 162 1.01e-12 67.4
MsG0880047750.01.T01 MTR_3g006105 43.114 167 86 4 83 240 2 168 2.34e-27 109
MsG0880047750.01.T01 MTR_3g006105 42.282 149 74 4 25 162 25 172 8.16e-27 107
MsG0880047750.01.T01 MTR_6g091850 48.515 101 44 2 510 602 1 101 3.20e-26 103
MsG0880047750.01.T01 MTR_1g104980 40.789 152 78 2 93 244 3 142 3.96e-26 105
MsG0880047750.01.T01 MTR_1g104980 40.559 143 76 2 25 167 15 148 7.19e-23 96.3
MsG0880047750.01.T01 MTR_6g023220 26.347 334 235 7 270 598 27 354 4.78e-25 107
MsG0880047750.01.T01 MTR_1g109550 40.845 142 79 2 1 140 5 143 1.49e-24 100
MsG0880047750.01.T01 MTR_1g109550 35.766 137 75 4 89 222 16 142 6.32e-16 75.5
MsG0880047750.01.T01 MTR_1g109550 47.692 65 33 1 175 239 19 82 2.34e-12 65.1
MsG0880047750.01.T01 MTR_5g036670 40.000 160 87 2 2 152 33 192 4.34e-23 105
MsG0880047750.01.T01 MTR_5g036670 35.185 162 100 2 79 235 31 192 1.24e-20 97.4
MsG0880047750.01.T01 MTR_5g036670 51.899 79 38 0 175 253 46 124 1.57e-15 80.9
MsG0880047750.01.T01 MTR_8g062700 39.766 171 86 3 11 164 41 211 1.07e-22 103
MsG0880047750.01.T01 MTR_8g062700 35.256 156 98 2 83 235 36 191 4.54e-19 92.4
MsG0880047750.01.T01 MTR_8g062700 52.564 78 35 1 167 242 35 112 4.33e-15 79.7
MsG0880047750.01.T01 MTR_8g062700 39.766 171 86 3 11 164 41 211 1.08e-22 103
MsG0880047750.01.T01 MTR_8g062700 35.256 156 98 2 83 235 36 191 4.78e-19 92.4
MsG0880047750.01.T01 MTR_8g062700 52.564 78 35 1 167 242 35 112 4.37e-15 79.7
MsG0880047750.01.T01 MTR_1g093300 53.763 93 43 0 433 525 6 98 6.63e-22 92.4
MsG0880047750.01.T01 MTR_6g008970 39.375 160 87 3 3 152 53 212 2.08e-20 96.7
MsG0880047750.01.T01 MTR_6g008970 34.615 156 99 1 83 235 57 212 8.17e-18 88.2
MsG0880047750.01.T01 MTR_6g008970 52.632 76 34 1 168 241 57 132 1.05e-13 75.1
MsG0880047750.01.T01 MTR_6g008995 38.514 148 84 2 12 152 37 184 2.35e-18 88.6
MsG0880047750.01.T01 MTR_6g008995 35.484 155 95 3 84 235 32 184 6.35e-17 84.3
MsG0880047750.01.T01 MTR_6g008995 59.701 67 27 0 175 241 40 106 8.66e-15 77.4
MsG0880047750.01.T01 MTR_7g013410 33.571 140 89 2 16 151 2 141 2.56e-18 82.4
MsG0880047750.01.T01 MTR_7g013410 28.873 142 99 1 93 234 2 141 2.86e-12 65.1
MsG0880047750.01.T01 MTR_7g013410 44.776 67 37 0 176 242 2 68 2.18e-11 62.4
MsG0880047750.01.T01 MTR_6g008995 38.889 126 73 1 31 152 2 127 4.81e-17 84.0
MsG0880047750.01.T01 MTR_1g105960 53.030 66 31 0 175 240 4 69 5.70e-15 71.6
MsG0880047750.01.T01 MTR_1g105960 36.441 118 52 1 90 207 2 96 7.35e-14 68.6
MsG0880047750.01.T01 MTR_1g105960 39.130 115 47 2 13 124 2 96 2.10e-13 67.0
MsG0880047750.01.T01 MTR_1g105010 49.315 73 37 0 85 157 12 84 1.09e-14 71.2
MsG0880047750.01.T01 MTR_1g105010 40.244 82 46 1 162 240 3 84 1.92e-12 64.7
MsG0880047750.01.T01 MTR_8g062350 40.217 92 53 1 84 175 9 98 4.98e-14 71.6
MsG0880047750.01.T01 MTR_1g104940 50.000 70 35 0 175 244 17 86 8.25e-14 68.9
MsG0880047750.01.T01 MTR_1g104940 37.634 93 58 0 82 174 7 99 5.06e-13 66.6
MsG0880047750.01.T01 MTR_1g104940 50.000 60 30 0 25 84 30 89 1.34e-11 62.4
MsG0880047750.01.T01 MTR_1g104937 36.364 99 63 0 89 187 12 110 5.83e-13 65.9
MsG0880047750.01.T01 MTR_1g104937 42.857 70 40 0 175 244 15 84 1.65e-11 62.0
MsG0880047750.01.T01 MTR_1g093310 46.667 75 34 1 175 249 12 80 2.99e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0880047750.01.T01 AT1G24190 39.735 151 82 2 11 152 13 163 1.25e-22 103
MsG0880047750.01.T01 AT1G24190 32.919 161 99 2 81 235 6 163 2.00e-17 87.0
MsG0880047750.01.T01 AT1G24190 35.152 165 85 4 175 326 17 172 2.83e-13 73.9
MsG0880047750.01.T01 AT1G24190 39.735 151 82 2 11 152 13 163 1.25e-22 103
MsG0880047750.01.T01 AT1G24190 32.919 161 99 2 81 235 6 163 2.15e-17 87.0
MsG0880047750.01.T01 AT1G24190 35.152 165 85 4 175 326 17 172 2.53e-13 73.9
MsG0880047750.01.T01 AT1G24190 39.735 151 82 2 11 152 13 163 1.39e-22 103
MsG0880047750.01.T01 AT1G24190 32.919 161 99 2 81 235 6 163 2.04e-17 87.0
MsG0880047750.01.T01 AT1G24190 54.286 70 32 0 175 244 17 86 3.03e-13 73.6
MsG0880047750.01.T01 AT1G70060 38.750 160 88 2 3 152 5 164 2.04e-21 99.8
MsG0880047750.01.T01 AT1G70060 33.333 159 102 1 81 235 6 164 1.11e-16 84.7
MsG0880047750.01.T01 AT1G70060 54.286 70 32 0 175 244 17 86 1.25e-12 71.6
MsG0880047750.01.T01 AT1G70060 38.750 160 88 2 3 152 5 164 2.04e-21 99.8
MsG0880047750.01.T01 AT1G70060 33.333 159 102 1 81 235 6 164 1.11e-16 84.7
MsG0880047750.01.T01 AT1G70060 54.286 70 32 0 175 244 17 86 1.25e-12 71.6
MsG0880047750.01.T01 AT3G01320 40.268 149 81 2 11 151 56 204 8.17e-21 97.8
MsG0880047750.01.T01 AT3G01320 33.766 154 100 1 83 234 51 204 1.46e-16 84.3
MsG0880047750.01.T01 AT3G01320 55.263 76 32 1 168 241 51 126 1.25e-15 81.3
MsG0880047750.01.T01 AT3G01320 40.268 149 81 2 11 151 56 204 8.42e-21 97.8
MsG0880047750.01.T01 AT3G01320 33.766 154 100 1 83 234 51 204 1.54e-16 84.3
MsG0880047750.01.T01 AT3G01320 55.263 76 32 1 168 241 51 126 1.23e-15 81.3
MsG0880047750.01.T01 AT1G59890 39.752 161 87 3 12 162 45 205 3.01e-20 95.9
MsG0880047750.01.T01 AT1G59890 37.162 148 92 1 89 235 45 192 2.75e-17 86.7
MsG0880047750.01.T01 AT1G59890 40.385 104 56 2 175 278 48 145 2.15e-11 67.8
MsG0880047750.01.T01 AT1G59890 39.752 161 87 3 12 162 45 205 3.11e-20 95.9
MsG0880047750.01.T01 AT1G59890 37.162 148 92 1 89 235 45 192 2.74e-17 86.7
MsG0880047750.01.T01 AT1G59890 40.385 104 56 2 175 278 48 145 2.12e-11 67.8
MsG0880047750.01.T01 AT1G59890 39.752 161 87 3 12 162 45 205 3.16e-20 95.9
MsG0880047750.01.T01 AT1G59890 37.162 148 92 1 89 235 45 192 2.81e-17 86.7
MsG0880047750.01.T01 AT1G59890 50.000 70 35 0 175 244 48 117 2.21e-11 67.8
MsG0880047750.01.T01 AT1G59890 39.752 161 87 3 12 162 45 205 3.19e-20 95.9
MsG0880047750.01.T01 AT1G59890 37.162 148 92 1 89 235 45 192 2.76e-17 86.7
MsG0880047750.01.T01 AT1G59890 50.000 70 35 0 175 244 48 117 2.12e-11 67.8
MsG0880047750.01.T01 AT5G15020 38.926 149 84 2 11 152 51 199 5.91e-20 95.1
MsG0880047750.01.T01 AT5G15020 34.416 154 100 1 83 235 46 199 5.57e-18 89.0
MsG0880047750.01.T01 AT5G15020 51.316 76 35 1 168 241 46 121 1.44e-13 74.7
MsG0880047750.01.T01 AT5G15020 38.926 149 84 2 11 152 51 199 6.48e-20 95.1
MsG0880047750.01.T01 AT5G15020 34.416 154 100 1 83 235 46 199 5.65e-18 89.0
MsG0880047750.01.T01 AT5G15020 51.316 76 35 1 168 241 46 121 1.40e-13 74.7
MsG0880047750.01.T01 AT1G24230 32.370 173 102 4 89 260 14 172 1.41e-19 89.0
MsG0880047750.01.T01 AT1G24230 27.111 225 149 4 11 230 13 227 5.78e-18 84.3
MsG0880047750.01.T01 AT1G10450 34.759 187 114 3 12 191 84 269 9.51e-19 91.3
MsG0880047750.01.T01 AT1G10450 37.838 148 89 2 89 234 84 230 4.50e-18 89.4
MsG0880047750.01.T01 AT1G10450 49.254 67 34 0 175 241 87 153 1.99e-11 67.8
MsG0880047750.01.T01 AT1G10450 34.759 187 114 3 12 191 33 218 1.39e-18 90.9
MsG0880047750.01.T01 AT1G10450 37.838 148 89 2 89 234 33 179 5.57e-18 89.0
MsG0880047750.01.T01 AT1G10450 49.254 67 34 0 175 241 36 102 2.23e-11 67.8
MsG0880047750.01.T01 AT1G10450 34.759 187 114 3 12 191 33 218 1.39e-18 90.9
MsG0880047750.01.T01 AT1G10450 37.838 148 89 2 89 234 33 179 5.57e-18 89.0
MsG0880047750.01.T01 AT1G10450 49.254 67 34 0 175 241 36 102 2.23e-11 67.8
MsG0880047750.01.T01 AT1G27260 34.615 156 91 3 90 236 4 157 4.19e-17 81.3
MsG0880047750.01.T01 AT1G27260 31.210 157 95 2 13 156 4 160 1.42e-13 70.9
MsG0880047750.01.T01 AT1G70030 34.416 154 87 5 12 155 11 160 7.52e-16 75.9
MsG0880047750.01.T01 AT1G70030 33.333 159 97 4 81 234 3 157 2.24e-14 71.6
MsG0880047750.01.T01 AT1G24200 35.570 149 90 2 89 234 14 159 7.92e-16 76.6
MsG0880047750.01.T01 AT1G24200 34.694 147 90 2 11 151 13 159 8.40e-15 73.9
MsG0880047750.01.T01 AT1G24200 39.000 100 54 2 167 264 7 101 3.74e-12 66.2
MsG0880047750.01.T01 AT1G24250 31.073 177 93 4 10 157 12 188 1.94e-15 77.0
MsG0880047750.01.T01 AT1G24250 28.235 170 97 4 88 233 13 181 1.45e-11 65.5
MsG0880047750.01.T01 AT1G23810 30.508 177 105 3 2 160 4 180 3.07e-15 76.3
MsG0880047750.01.T01 AT1G23810 30.189 159 97 4 88 233 13 170 7.00e-13 69.3
MsG0880047750.01.T01 AT1G27280 31.737 167 106 3 100 258 4 170 8.45e-15 74.3
MsG0880047750.01.T01 AT5G35610 36.283 113 62 2 176 281 14 123 3.07e-13 68.2
MsG0880047750.01.T01 AT5G15025 50.000 70 35 0 175 244 50 119 7.49e-12 63.2
MsG0880047750.01.T01 AT5G15025 45.349 86 43 2 2 83 36 121 2.83e-11 61.6
MsG0880047750.01.T01 AT1G70030 33.333 147 66 6 12 155 22 139 1.66e-11 62.8
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 6.91e-11 66.2
MsG0880047750.01.T01 AT5G15040 44.776 67 37 0 175 241 6 72 8.00e-11 59.3
MsG0880047750.01.T01 AT5G15040 44.776 67 37 0 175 241 6 72 8.00e-11 59.3
MsG0880047750.01.T01 AT5G15040 44.776 67 37 0 175 241 6 72 8.00e-11 59.3
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 8.17e-11 65.9
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 8.32e-11 65.9
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 8.46e-11 65.9
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 8.46e-11 65.9
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 8.51e-11 65.9
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 8.51e-11 65.9
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 8.53e-11 65.9
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 8.59e-11 65.9
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 312 376 8.67e-11 65.9
MsG0880047750.01.T01 AT4G12020 51.515 66 31 1 176 241 245 309 9.16e-11 65.9

Find 114 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCCCAAAATTAAATGTTTA+TGG 0.087759 8:-90400689 None:intergenic
AGACCATACAAATTTAATTT+TGG 0.091325 8:+90401175 MsG0880047750.01.T01:CDS
AGGCCATAAACATTTAATTT+TGG 0.093733 8:+90400686 MsG0880047750.01.T01:CDS
TTCTGGCACTTTGCATATTC+TGG 0.140245 8:+90404511 MsG0880047750.01.T01:CDS
GTTTATCAATCTCGAAATTT+TGG 0.149964 8:+90404739 MsG0880047750.01.T01:CDS
ACCTTCTTTCTTCTCCTAAA+TGG 0.179169 8:-90404592 None:intergenic
TTGAAGTCTACTCCAATTAT+TGG 0.189002 8:-90405379 None:intergenic
CAAAGATGATCAATTATTTC+TGG 0.210256 8:+90404494 MsG0880047750.01.T01:CDS
GATGTATTGGAGAGATTTCT+TGG 0.258709 8:+90404381 MsG0880047750.01.T01:CDS
AATGTGAATCCGTATCTTTC+TGG 0.260796 8:-90400966 None:intergenic
GGGCATGTCGATTTACTTTC+GGG 0.267983 8:+90400927 MsG0880047750.01.T01:CDS
ATTGCGATGAAGCTATTTAA+AGG 0.296597 8:+90400906 MsG0880047750.01.T01:CDS
AGTATGATTTCATAATTCTT+TGG 0.310501 8:-90400726 None:intergenic
TGTGGTTCATACCAAGTCTA+TGG 0.311544 8:+90404969 MsG0880047750.01.T01:CDS
AGAGTGCATGAGTTGTTTAA+AGG 0.320962 8:+90400666 MsG0880047750.01.T01:CDS
AGGGCATGTCGATTTACTTT+CGG 0.325603 8:+90400926 MsG0880047750.01.T01:CDS
CAGGGAACTATCAACTTTCT+TGG 0.330236 8:+90404269 MsG0880047750.01.T01:CDS
GTCATCAAAGTCTAGAGATT+TGG 0.331846 8:-90404311 None:intergenic
CTTTCATAACCCCACATGTT+CGG 0.334790 8:-90405108 None:intergenic
TTCCAACTTGACATACTTCA+TGG 0.336973 8:-90405025 None:intergenic
CAGAAGTCATGAGTGATTAC+AGG 0.353321 8:+90400610 MsG0880047750.01.T01:CDS
TTTCATAACCCCACATGTTC+GGG 0.364907 8:-90405107 None:intergenic
ATCCCAAAATTAAATTTGTA+TGG 0.371343 8:-90401178 None:intergenic
GAACGATAAACTTGTTGGTT+AGG 0.372838 8:-90404472 None:intergenic
GGGCATTTCATAAGATGTAT+TGG 0.386928 8:+90404368 MsG0880047750.01.T01:CDS
TCTTTGAACGATAAACTTGT+TGG 0.391219 8:-90404477 None:intergenic
TTGCGATGAAGCTATTTAAA+GGG 0.398600 8:+90400907 MsG0880047750.01.T01:CDS
TCGCGTCGACCTAGTTCCTT+TGG 0.411347 8:+90399456 MsG0880047750.01.T01:five_prime_UTR
TTGCTTGTGTGTGTAAGAAT+TGG 0.421391 8:+90404344 MsG0880047750.01.T01:CDS
ACTCTTGCTTTGACACCTCT+TGG 0.426483 8:-90400648 None:intergenic
CAAAATGCAAAGTGTATGTA+GGG 0.426712 8:+90405163 MsG0880047750.01.T01:CDS
ACAAGCTGCCAAAGTACATT+AGG 0.428568 8:+90405193 MsG0880047750.01.T01:CDS
TCATGGCAATGAAGCTCAAA+TGG 0.432218 8:-90401239 None:intergenic
AGTTGTGTTTCAAGATAAGA+TGG 0.435039 8:+90400809 MsG0880047750.01.T01:CDS
CATTGCATTATTATATGCTC+CGG 0.435194 8:+90405059 MsG0880047750.01.T01:CDS
AGGGAACTATCAACTTTCTT+GGG 0.435308 8:+90404270 MsG0880047750.01.T01:CDS
AAAATTGACTTTAAAGGTTG+GGG 0.437076 8:-90404623 None:intergenic
TAACTTCTTTGTCGCGCCTA+AGG 0.438182 8:+90404920 MsG0880047750.01.T01:CDS
TGGGTTACTTATTCAACAAT+GGG 0.440934 8:+90404763 MsG0880047750.01.T01:CDS
TTGGTTAGGTATGCTGATAA+AGG 0.451302 8:-90404458 None:intergenic
TATGTCAAGTTGGAAACTTT+GGG 0.454406 8:+90405033 MsG0880047750.01.T01:CDS
ACAAAATGCAAAGTGTATGT+AGG 0.455850 8:+90405162 MsG0880047750.01.T01:CDS
AGTGGATATTTGATCATGAC+AGG 0.457131 8:+90404541 MsG0880047750.01.T01:CDS
AATGAAAATTCATACCTGAT+TGG 0.458500 8:-90399539 None:intergenic
GTATGTCAAGTTGGAAACTT+TGG 0.467792 8:+90405032 MsG0880047750.01.T01:CDS
GAGCTTCATTGCCATGAGAC+TGG 0.471478 8:+90401245 MsG0880047750.01.T01:CDS
AGCCACTAAGACAAAATCCT+TGG 0.472342 8:-90404689 None:intergenic
AGCCGTGTTTCATGATAAGT+TGG 0.480965 8:+90401058 MsG0880047750.01.T01:CDS
TCGCAATAAACCCACTGATC+GGG 0.481249 8:-90399401 None:intergenic
TTCTTTGTCGCGCCTAAGGT+TGG 0.489388 8:+90404924 MsG0880047750.01.T01:CDS
CGGCAGACACCAAAGGAACT+AGG 0.501828 8:-90399465 None:intergenic
AGTGTGATTTGATGTTCCTC+TGG 0.511878 8:-90401215 None:intergenic
GCATATTCTGGATCTTCTAG+TGG 0.514037 8:+90404523 MsG0880047750.01.T01:CDS
TTGGGTTACTTATTCAACAA+TGG 0.515244 8:+90404762 MsG0880047750.01.T01:CDS
CGTCACAACTAACCAACCTT+AGG 0.518704 8:-90404936 None:intergenic
TCATGTGACCTAATGTACTT+TGG 0.520097 8:-90405201 None:intergenic
AACCATGAAGTATGTCAAGT+TGG 0.523678 8:+90405023 MsG0880047750.01.T01:CDS
ATCGCAATAAACCCACTGAT+CGG 0.526426 8:-90399402 None:intergenic
ACAAAGTCAACAATCATCCA+TGG 0.526718 8:-90404790 None:intergenic
TACTTCTTGCCAGAAAGATA+CGG 0.529766 8:+90400957 MsG0880047750.01.T01:CDS
GTCAACGACAAGGGCAACAT+AGG 0.530388 8:+90404838 MsG0880047750.01.T01:CDS
CAAGGCTCAAGGAATTGATA+CGG 0.538557 8:+90401118 MsG0880047750.01.T01:CDS
TCCATTTAGGAGAAGAAAGA+AGG 0.539421 8:+90404591 MsG0880047750.01.T01:CDS
CCACATGTTCGGGTTGCTCA+AGG 0.539860 8:-90405097 None:intergenic
TAAAAGAAAATCAGCGGCAG+CGG 0.540117 8:-90399485 None:intergenic
ACACACAAGCAAATTGAAAG+AGG 0.547191 8:-90404333 None:intergenic
CTTGTGTGTGTAAGAATTGG+AGG 0.551053 8:+90404347 MsG0880047750.01.T01:CDS
TGTTTATGATCTTGCAACAG+TGG 0.557427 8:-90400990 None:intergenic
GATGCTTTGTTTGATGATGC+AGG 0.558023 8:+90400534 MsG0880047750.01.T01:CDS
TGAAATCATACTTCCTCCAT+CGG 0.558415 8:+90400737 MsG0880047750.01.T01:CDS
AATTGATACGGGAGGTGTTG+CGG 0.560033 8:+90401130 MsG0880047750.01.T01:CDS
TTCATACTACAAGACCCTAC+TGG 0.561934 8:+90405229 MsG0880047750.01.T01:CDS
CCTTGAGCAACCCGAACATG+TGG 0.567823 8:+90405097 MsG0880047750.01.T01:CDS
ATTGCATTATTATATGCTCC+GGG 0.570402 8:+90405060 MsG0880047750.01.T01:CDS
CAAGACCCTACTGGTTGGAC+TGG 0.573914 8:+90405238 MsG0880047750.01.T01:CDS
GCGGCAGCGGCAGACACCAA+AGG 0.577737 8:-90399472 None:intergenic
GTCATGAGTGATTACAGGGA+TGG 0.580278 8:+90400615 MsG0880047750.01.T01:CDS
ATCAAACAAAGCATCGCTTG+TGG 0.584167 8:-90400526 None:intergenic
TACTACAAGACCCTACTGGT+TGG 0.586463 8:+90405233 MsG0880047750.01.T01:CDS
AAAAGACCAGTCCAACCAGT+AGG 0.594037 8:-90405244 None:intergenic
AACGCAGATCAAAAGCTACA+TGG 0.594334 8:-90405323 None:intergenic
TCAACGACAAGGGCAACATA+GGG 0.594974 8:+90404839 MsG0880047750.01.T01:CDS
ATTAAATGCCACCATAGACT+TGG 0.597479 8:-90404980 None:intergenic
ATCACAAATCACAAGGCTCA+AGG 0.601072 8:+90401107 MsG0880047750.01.T01:CDS
AAGGCTCAAGGAATTGATAC+GGG 0.604072 8:+90401119 MsG0880047750.01.T01:CDS
AAAGACCAGTCCAACCAGTA+GGG 0.607927 8:-90405243 None:intergenic
TTCCAACTTATCATGAAACA+CGG 0.609205 8:-90401060 None:intergenic
CTCATCATATCCCGATCAGT+GGG 0.609425 8:+90399391 MsG0880047750.01.T01:five_prime_UTR
TTGATGTTCCTCTGGCAGCA+AGG 0.614555 8:-90401207 None:intergenic
TAAACTACTAACCAGTCTCA+TGG 0.620534 8:-90401256 None:intergenic
CAAAGTCAACAATCATCCAT+GGG 0.622007 8:-90404789 None:intergenic
CTTGAGCAACCCGAACATGT+GGG 0.625028 8:+90405098 MsG0880047750.01.T01:CDS
ACTCATCATATCCCGATCAG+TGG 0.627863 8:+90399390 MsG0880047750.01.T01:five_prime_UTR
AGAAGTCATGAGTGATTACA+GGG 0.629088 8:+90400611 MsG0880047750.01.T01:CDS
CGCGACAAAGAAGTTACGCT+AGG 0.633955 8:-90404913 None:intergenic
ATTCAACAATGGGATACCCA+TGG 0.636286 8:+90404773 MsG0880047750.01.T01:CDS
AAGAGATAAAAGAAAATCAG+CGG 0.638548 8:-90399491 None:intergenic
ATTCAATGCCTTGCTGCCAG+AGG 0.639665 8:+90401199 MsG0880047750.01.T01:CDS
ACAAGTTATCACAAATCACA+AGG 0.640420 8:+90401100 MsG0880047750.01.T01:CDS
TATATATGTTGTCAACGACA+AGG 0.653477 8:+90404828 MsG0880047750.01.T01:CDS
TGTCAAAAGCAAGCAAGACA+CGG 0.654737 8:-90404660 None:intergenic
CTGTTGCAAGATCATAAACA+AGG 0.655865 8:+90400993 MsG0880047750.01.T01:CDS
GAGATTTGGAAATGATATCG+AGG 0.657764 8:-90404297 None:intergenic
TTGAGCAACCCGAACATGTG+GGG 0.659897 8:+90405099 MsG0880047750.01.T01:CDS
ATATATGTTGTCAACGACAA+GGG 0.666270 8:+90404829 MsG0880047750.01.T01:CDS
TTGTGTGTGTAAGAATTGGA+GGG 0.670781 8:+90404348 MsG0880047750.01.T01:CDS
GGTTCATACCAAGTCTATGG+TGG 0.672324 8:+90404972 MsG0880047750.01.T01:CDS
AAGGCATAGTAGTTTCCACC+CGG 0.674044 8:-90405078 None:intergenic
AAAATGCAAAGTGTATGTAG+GGG 0.684341 8:+90405164 MsG0880047750.01.T01:CDS
GCATTATTATATGCTCCGGG+TGG 0.696983 8:+90405063 MsG0880047750.01.T01:CDS
GCTCAAGGAATTGATACGGG+AGG 0.704641 8:+90401122 MsG0880047750.01.T01:CDS
GTGGATATTTGATCATGACA+GGG 0.707619 8:+90404542 MsG0880047750.01.T01:CDS
GATGGACGAATTGATCCAAG+AGG 0.740587 8:+90400633 MsG0880047750.01.T01:CDS
ACTGATCGGGATATGATGAG+TGG 0.752974 8:-90399388 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAAAGACA+TGG - Chr8:90403733-90403752 None:intergenic 10.0%
!! AAATTCAACAATATAAATAA+TGG - Chr8:90400226-90400245 None:intergenic 10.0%
!! GTAAATTAAATTGAATTTAT+TGG + Chr8:90399589-90399608 MsG0880047750.01.T01:intron 10.0%
!!! AAAATATGTTTTTAAAGTTT+TGG + Chr8:90400409-90400428 MsG0880047750.01.T01:intron 10.0%
!!! AAATATGTTTTTAAAGTTTT+GGG + Chr8:90400410-90400429 MsG0880047750.01.T01:intron 10.0%
!!! ATTAATGTAAAATATGTTTT+AGG + Chr8:90400367-90400386 MsG0880047750.01.T01:intron 10.0%
!!! CATAATTTTGTTAAAAATTT+TGG + Chr8:90402677-90402696 MsG0880047750.01.T01:intron 10.0%
!! AAAACTAAAGTAAAAAGATA+AGG + Chr8:90402224-90402243 MsG0880047750.01.T01:intron 15.0%
!! AAACTAAAGTAAAAAGATAA+GGG + Chr8:90402225-90402244 MsG0880047750.01.T01:intron 15.0%
!! AATATATAAGACATAAAAGA+TGG + Chr8:90399807-90399826 MsG0880047750.01.T01:intron 15.0%
!! ACATTATTATAGATAAAGAA+TGG - Chr8:90402969-90402988 None:intergenic 15.0%
!! CAAAACACTAATAAAATTAA+AGG + Chr8:90402870-90402889 MsG0880047750.01.T01:intron 15.0%
!! CATTTAATAAATGATGTATT+TGG - Chr8:90400062-90400081 None:intergenic 15.0%
!! TAAAGCCTATTTAATTAAAT+AGG + Chr8:90400163-90400182 MsG0880047750.01.T01:intron 15.0%
!! TAAATTGAATTTATTGGAAA+CGG + Chr8:90399595-90399614 MsG0880047750.01.T01:intron 15.0%
!! TATAGCCTATTTAATTAAAT+AGG - Chr8:90400171-90400190 None:intergenic 15.0%
!! TTATGAAACTGAAATTTAAT+AGG - Chr8:90403561-90403580 None:intergenic 15.0%
!!! ATAAGAAAAATTGACTTTAA+AGG - Chr8:90404632-90404651 None:intergenic 15.0%
!!! ATCATTTTAGTATCTTTTTT+TGG + Chr8:90403622-90403641 MsG0880047750.01.T01:intron 15.0%
!!! ATGTTTTTAAATAGATTTTC+AGG + Chr8:90400483-90400502 MsG0880047750.01.T01:intron 15.0%
!!! TAAGCAAATTTTAACTTTTT+AGG + Chr8:90399998-90400017 MsG0880047750.01.T01:intron 15.0%
!!! TTAATTTTATTAGTGTTTTG+TGG - Chr8:90402870-90402889 None:intergenic 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - Chr8:90402225-90402244 None:intergenic 15.0%
!!! TTGTTAATATTTTATGCTTT+CGG + Chr8:90403771-90403790 MsG0880047750.01.T01:intron 15.0%
!! AACTGCTTATATTAAAAAGA+AGG + Chr8:90404031-90404050 MsG0880047750.01.T01:intron 20.0%
!! ACTCAAAATTGTATTGTATT+GGG + Chr8:90404060-90404079 MsG0880047750.01.T01:intron 20.0%
!! ACTCATTAATTCTTTCTTAA+CGG + Chr8:90401617-90401636 MsG0880047750.01.T01:intron 20.0%
!! AGAAAGATAAAAACAAAAAG+TGG - Chr8:90399519-90399538 None:intergenic 20.0%
!! AGAAATATAAGAGAAATAGA+AGG - Chr8:90401916-90401935 None:intergenic 20.0%
!! AGTATGATTTCATAATTCTT+TGG - Chr8:90400729-90400748 None:intergenic 20.0%
!! ATAAACATAATTAGACAAGT+TGG + Chr8:90401496-90401515 MsG0880047750.01.T01:intron 20.0%
!! ATAATGTTAATTTCAATGTG+AGG + Chr8:90403949-90403968 MsG0880047750.01.T01:intron 20.0%
!! ATAGATAAAGAATGGAAAAA+GGG - Chr8:90402961-90402980 None:intergenic 20.0%
!! ATATGTAGTATTATCGATAA+AGG - Chr8:90403487-90403506 None:intergenic 20.0%
!! ATCCCAAAATTAAATTTGTA+TGG - Chr8:90401181-90401200 None:intergenic 20.0%
!! ATGGATAAAGAAATAAGAAA+AGG - Chr8:90403675-90403694 None:intergenic 20.0%
!! CTTGTCTAATTATGTTTATT+TGG - Chr8:90401495-90401514 None:intergenic 20.0%
!! GATATGTAGTATTATTCATT+CGG - Chr8:90403533-90403552 None:intergenic 20.0%
!! TAAGTCGAATATCTTTAAAT+TGG + Chr8:90401820-90401839 MsG0880047750.01.T01:intron 20.0%
!! TAGAAAAGATCATTGAAAAT+AGG - Chr8:90401736-90401755 None:intergenic 20.0%
!! TATAGATAAAGAATGGAAAA+AGG - Chr8:90402962-90402981 None:intergenic 20.0%
!! TGAAAATTTCATGTAAAATG+CGG - Chr8:90404115-90404134 None:intergenic 20.0%
!! TTATCATTAGCATAAAACAT+TGG + Chr8:90399741-90399760 MsG0880047750.01.T01:intron 20.0%
!! TTCCCAAAATTAAATGTTTA+TGG - Chr8:90400692-90400711 None:intergenic 20.0%
!! TTGAAAGAATTAGATAGTTT+AGG - Chr8:90403040-90403059 None:intergenic 20.0%
!!! AAAAATTGACTTTAAAGGTT+GGG - Chr8:90404627-90404646 None:intergenic 20.0%
!!! AATCAGTTGATATTGAATTA+GGG - Chr8:90399646-90399665 None:intergenic 20.0%
!!! AGACCATACAAATTTAATTT+TGG + Chr8:90401175-90401194 MsG0880047750.01.T01:CDS 20.0%
!!! ATTTTTTGTTTACTTGATAG+GGG + Chr8:90399891-90399910 MsG0880047750.01.T01:intron 20.0%
!!! CATTTTTTGTTTACTTGATA+GGG + Chr8:90399890-90399909 MsG0880047750.01.T01:intron 20.0%
!!! CTTTATAATTTGTGCAATTT+TGG + Chr8:90402612-90402631 MsG0880047750.01.T01:intron 20.0%
!!! CTTTCTTTTTCTTTTTTGAT+GGG + Chr8:90403840-90403859 MsG0880047750.01.T01:intron 20.0%
!!! GACCATACAAATTTAATTTT+GGG + Chr8:90401176-90401195 MsG0880047750.01.T01:CDS 20.0%
!!! TATGAGTTTAATAGGTTTTT+TGG - Chr8:90400197-90400216 None:intergenic 20.0%
!!! TCTTTCTTTTTCTTTTTTGA+TGG + Chr8:90403839-90403858 MsG0880047750.01.T01:intron 20.0%
!!! TGTTGATTTGTTTCTTATTT+TGG - Chr8:90401425-90401444 None:intergenic 20.0%
!!! TTGTTAATAATTTGTGCTTT+CGG + Chr8:90403923-90403942 MsG0880047750.01.T01:intron 20.0%
!!! TTTAGTAGTAGTAAACTTTT+AGG + Chr8:90400436-90400455 MsG0880047750.01.T01:intron 20.0%
!!! TTTAGTTTTGGATGTATTTA+TGG - Chr8:90402213-90402232 None:intergenic 20.0%
! AAAATTTCATGTAAAATGCG+GGG - Chr8:90404113-90404132 None:intergenic 25.0%
! AAGAGATAAAAGAAAATCAG+CGG - Chr8:90399494-90399513 None:intergenic 25.0%
! AATATCTTTAAATTGGATGG+GGG + Chr8:90401827-90401846 MsG0880047750.01.T01:intron 25.0%
! AATGAAAATTCATACCTGAT+TGG - Chr8:90399542-90399561 None:intergenic 25.0%
! AATTGTATTGTATTGGGAAA+AGG + Chr8:90404066-90404085 MsG0880047750.01.T01:intron 25.0%
! AGATCATTGAAAATAGGTTT+AGG - Chr8:90401730-90401749 None:intergenic 25.0%
! AGTTATCAATGATATGTATG+AGG - Chr8:90402336-90402355 None:intergenic 25.0%
! ATTATGGATGTCAAAAGAAA+AGG - Chr8:90402937-90402956 None:intergenic 25.0%
! ATTCGGAATTGGAATTTAAT+AGG - Chr8:90403516-90403535 None:intergenic 25.0%
! ATTGATCCACTACAAAATTT+AGG + Chr8:90402896-90402915 MsG0880047750.01.T01:intron 25.0%
! ATTGTATTGTATTGGGAAAA+GGG + Chr8:90404067-90404086 MsG0880047750.01.T01:intron 25.0%
! CAAAGATGATCAATTATTTC+TGG + Chr8:90404494-90404513 MsG0880047750.01.T01:CDS 25.0%
! CACTCAAAATTGTATTGTAT+TGG + Chr8:90404059-90404078 MsG0880047750.01.T01:intron 25.0%
! CCTATCAAGTAAACAAAAAA+TGG - Chr8:90399892-90399911 None:intergenic 25.0%
! CGAATATCTTTAAATTGGAT+GGG + Chr8:90401825-90401844 MsG0880047750.01.T01:intron 25.0%
! GAAAATTTCATGTAAAATGC+GGG - Chr8:90404114-90404133 None:intergenic 25.0%
! GAATATCTTTAAATTGGATG+GGG + Chr8:90401826-90401845 MsG0880047750.01.T01:intron 25.0%
! GGAAAAAGATTTCTTGAAAA+AGG - Chr8:90404440-90404459 None:intergenic 25.0%
! GGAAGATATATGAGTTTAAT+AGG - Chr8:90400205-90400224 None:intergenic 25.0%
! GTTATCAATGATATGTATGA+GGG - Chr8:90402335-90402354 None:intergenic 25.0%
! TAAATCCTTTCTCAAATACT+AGG + Chr8:90401449-90401468 MsG0880047750.01.T01:intron 25.0%
! TAATGAGTCGAATCAAAATA+TGG - Chr8:90401605-90401624 None:intergenic 25.0%
! TAGTATTATTCATTCGGAAT+TGG - Chr8:90403527-90403546 None:intergenic 25.0%
! TCGAATATCTTTAAATTGGA+TGG + Chr8:90401824-90401843 MsG0880047750.01.T01:intron 25.0%
! TTTGTCCAATCTCTATAATA+AGG - Chr8:90403346-90403365 None:intergenic 25.0%
!! AAAATTGACTTTAAAGGTTG+GGG - Chr8:90404626-90404645 None:intergenic 25.0%
!! AACAATTTTCCCATAACAAT+AGG - Chr8:90402275-90402294 None:intergenic 25.0%
!! AATTTGCTTATAATAGTGAC+CGG + Chr8:90400097-90400116 MsG0880047750.01.T01:intron 25.0%
!! AATTTGCTTATAATAGTGAC+CGG - Chr8:90400116-90400097 None:intergenic 25.0%
!! GAAAAATTGACTTTAAAGGT+TGG - Chr8:90404628-90404647 None:intergenic 25.0%
!! GAATCAGTTGATATTGAATT+AGG - Chr8:90399647-90399666 None:intergenic 25.0%
!! GTTTATCAATCTCGAAATTT+TGG + Chr8:90404739-90404758 MsG0880047750.01.T01:CDS 25.0%
!! TAGTTTAGGACATTAAACAT+TGG - Chr8:90403026-90403045 None:intergenic 25.0%
!! TGTTAATAATTTGTGCTTTC+GGG + Chr8:90403924-90403943 MsG0880047750.01.T01:intron 25.0%
!! TTTTGCTAATGAATCCATTT+AGG + Chr8:90404578-90404597 MsG0880047750.01.T01:CDS 25.0%
!!! AACTTCTTTTTTATGATCAG+CGG + Chr8:90399708-90399727 MsG0880047750.01.T01:intron 25.0%
!!! AAGTAAGCTTTAAATAGACT+AGG - Chr8:90399952-90399971 None:intergenic 25.0%
!!! AGGCCATAAACATTTAATTT+TGG + Chr8:90400686-90400705 MsG0880047750.01.T01:CDS 25.0%
!!! CATATGTTGATAATTTCTGT+TGG + Chr8:90401297-90401316 MsG0880047750.01.T01:intron 25.0%
!!! CCATTTTTTGTTTACTTGAT+AGG + Chr8:90399889-90399908 MsG0880047750.01.T01:intron 25.0%
!!! GGCCATAAACATTTAATTTT+GGG + Chr8:90400687-90400706 MsG0880047750.01.T01:CDS 25.0%
!!! GTATGATTCATTTTGAAACA+TGG - Chr8:90403131-90403150 None:intergenic 25.0%
!!! TCTTTTTGTTTGCCAATAAT+TGG + Chr8:90405367-90405386 MsG0880047750.01.T01:three_prime_UTR 25.0%
!!! TTAGAATGTTTTTTCATGTG+AGG + Chr8:90403795-90403814 MsG0880047750.01.T01:intron 25.0%
!!! TTTCTTTTTTGATGGGATTT+GGG + Chr8:90403847-90403866 MsG0880047750.01.T01:intron 25.0%
!!! TTTTCTTTTTTGATGGGATT+TGG + Chr8:90403846-90403865 MsG0880047750.01.T01:intron 25.0%
AAAAATTTCCACCCTTCAAT+AGG + Chr8:90402725-90402744 MsG0880047750.01.T01:intron 30.0%
AAAATGCAAAGTGTATGTAG+GGG + Chr8:90405164-90405183 MsG0880047750.01.T01:CDS 30.0%
AAACAGTAGACACAATAACT+AGG - Chr8:90403077-90403096 None:intergenic 30.0%
AACACAACCGTCATTTAATT+AGG + Chr8:90403391-90403410 MsG0880047750.01.T01:intron 30.0%
AAGTAAAAAGATAAGGGTTC+AGG + Chr8:90402231-90402250 MsG0880047750.01.T01:intron 30.0%
AAGTAAGTAGGTCGATTATA+TGG + Chr8:90402499-90402518 MsG0880047750.01.T01:intron 30.0%
ACAAAATGCAAAGTGTATGT+AGG + Chr8:90405162-90405181 MsG0880047750.01.T01:CDS 30.0%
ACAAGTTATCACAAATCACA+AGG + Chr8:90401100-90401119 MsG0880047750.01.T01:CDS 30.0%
AGATGGAAAATAGGTTTAAG+TGG + Chr8:90401787-90401806 MsG0880047750.01.T01:intron 30.0%
AGTAAAAAGATAAGGGTTCA+GGG + Chr8:90402232-90402251 MsG0880047750.01.T01:intron 30.0%
AGTTGTGTTTCAAGATAAGA+TGG + Chr8:90400809-90400828 MsG0880047750.01.T01:CDS 30.0%
ATATATGTTGTCAACGACAA+GGG + Chr8:90404829-90404848 MsG0880047750.01.T01:CDS 30.0%
ATCTATTAGAGAGATAGTTG+GGG - Chr8:90401771-90401790 None:intergenic 30.0%
ATGCAAAGGGAAAAAAAGAA+TGG + Chr8:90404243-90404262 MsG0880047750.01.T01:intron 30.0%
ATGTCAAAAGAAAAGGAGAT+CGG - Chr8:90402930-90402949 None:intergenic 30.0%
ATTGCATTATTATATGCTCC+GGG + Chr8:90405060-90405079 MsG0880047750.01.T01:CDS 30.0%
ATTGCGATGAAGCTATTTAA+AGG + Chr8:90400906-90400925 MsG0880047750.01.T01:CDS 30.0%
ATTTCTTTATCCATGCTGAT+GGG + Chr8:90403681-90403700 MsG0880047750.01.T01:intron 30.0%
CAAAATGCAAAGTGTATGTA+GGG + Chr8:90405163-90405182 MsG0880047750.01.T01:CDS 30.0%
CAATCTTTCTTGTAACTTCA+TGG + Chr8:90402568-90402587 MsG0880047750.01.T01:intron 30.0%
CATCTATTAGAGAGATAGTT+GGG - Chr8:90401772-90401791 None:intergenic 30.0%
CATGTGTGAATGAAGAATTT+CGG - Chr8:90403162-90403181 None:intergenic 30.0%
CATTCTCACTATTACGTATT+TGG + Chr8:90403319-90403338 MsG0880047750.01.T01:intron 30.0%
CATTGCATTATTATATGCTC+CGG + Chr8:90405059-90405078 MsG0880047750.01.T01:CDS 30.0%
CATTTAATTAGGCATGGTAT+TGG + Chr8:90403402-90403421 MsG0880047750.01.T01:intron 30.0%
CGCGTATGAATATAGAATTT+AGG - Chr8:90403192-90403211 None:intergenic 30.0%
CTCTCTAATAGATGGAAAAT+AGG + Chr8:90401778-90401797 MsG0880047750.01.T01:intron 30.0%
CTTCAAATAAGCATACAACT+CGG + Chr8:90402167-90402186 MsG0880047750.01.T01:intron 30.0%
GACATTAAACATTGGTAAAC+TGG - Chr8:90403018-90403037 None:intergenic 30.0%
GCAGATATATTAGTGTGATT+AGG + Chr8:90400283-90400302 MsG0880047750.01.T01:intron 30.0%
GTATAGTTAGATCGAGAAAT+GGG - Chr8:90402996-90403015 None:intergenic 30.0%
GTGACAAAATACCTATTGAA+GGG - Chr8:90402739-90402758 None:intergenic 30.0%
TACCATGCCTAATTAAATGA+CGG - Chr8:90403401-90403420 None:intergenic 30.0%
TAGAAAGCTTAGCTTAACAA+TGG - Chr8:90399669-90399688 None:intergenic 30.0%
TAGAACCTAGTATTTGAGAA+AGG - Chr8:90401457-90401476 None:intergenic 30.0%
TATAGTTAGATCGAGAAATG+GGG - Chr8:90402995-90403014 None:intergenic 30.0%
TATATATGTTGTCAACGACA+AGG + Chr8:90404828-90404847 MsG0880047750.01.T01:CDS 30.0%
TATTTCTTTATCCATGCTGA+TGG + Chr8:90403680-90403699 MsG0880047750.01.T01:intron 30.0%
TCATTGAAAATAGGTTTAGG+TGG - Chr8:90401727-90401746 None:intergenic 30.0%
TCTTTGAACGATAAACTTGT+TGG - Chr8:90404480-90404499 None:intergenic 30.0%
TGGGTTACTTATTCAACAAT+GGG + Chr8:90404763-90404782 MsG0880047750.01.T01:CDS 30.0%
TGTTATGGGAAAATTGTTTG+TGG + Chr8:90402277-90402296 MsG0880047750.01.T01:intron 30.0%
TTCCAACTTATCATGAAACA+CGG - Chr8:90401063-90401082 None:intergenic 30.0%
TTGAAGTCTACTCCAATTAT+TGG - Chr8:90405382-90405401 None:intergenic 30.0%
TTGCGATGAAGCTATTTAAA+GGG + Chr8:90400907-90400926 MsG0880047750.01.T01:CDS 30.0%
TTGGGAATGATCATATATCA+AGG - Chr8:90401390-90401409 None:intergenic 30.0%
TTGGGTTACTTATTCAACAA+TGG + Chr8:90404762-90404781 MsG0880047750.01.T01:CDS 30.0%
TTGGTCCTTATTATAGAGAT+TGG + Chr8:90403338-90403357 MsG0880047750.01.T01:intron 30.0%
TTGTAGCAAGGAGAATAAAT+TGG - Chr8:90401702-90401721 None:intergenic 30.0%
TTTACACATTGTAAAGCGAA+AGG - Chr8:90399574-90399593 None:intergenic 30.0%
TTTCATGTCTTCGTATGATT+TGG + Chr8:90400250-90400269 MsG0880047750.01.T01:intron 30.0%
TTTCTCAAATACTAGGTTCT+AGG + Chr8:90401456-90401475 MsG0880047750.01.T01:intron 30.0%
! ATATATCAAGGTGCTTAGTT+TGG - Chr8:90401378-90401397 None:intergenic 30.0%
! CATAGTCCTAAATTTTGTAG+TGG - Chr8:90402905-90402924 None:intergenic 30.0%
! GAAGACTTTTGAACAAGTAA+TGG - Chr8:90404418-90404437 None:intergenic 30.0%
! GTTTTTATCTTTCTCCAATC+AGG + Chr8:90399525-90399544 MsG0880047750.01.T01:five_prime_UTR 30.0%
! TTAACTATACACGTTGCTTT+CGG + Chr8:90403295-90403314 MsG0880047750.01.T01:intron 30.0%
!! AGAATGGAAAAAGGGTATTA+TGG - Chr8:90402953-90402972 None:intergenic 30.0%
!! ATCAATCTCGAAATTTTGGT+TGG + Chr8:90404743-90404762 MsG0880047750.01.T01:CDS 30.0%
!! TATGTCAAGTTGGAAACTTT+GGG + Chr8:90405033-90405052 MsG0880047750.01.T01:CDS 30.0%
!! TATTTAAACCGTGTTACTTG+TGG + Chr8:90401963-90401982 MsG0880047750.01.T01:intron 30.0%
!! TGCTTATTTTTCACTGCAAA+CGG + Chr8:90403234-90403253 MsG0880047750.01.T01:intron 30.0%
!!! ATTTTTTGAAGGTAGGGTAT+TGG - Chr8:90402711-90402730 None:intergenic 30.0%
!!! GTGGAAATTTTTTGAAGGTA+GGG - Chr8:90402717-90402736 None:intergenic 30.0%
!!! TCAATCTCGAAATTTTGGTT+GGG + Chr8:90404744-90404763 MsG0880047750.01.T01:CDS 30.0%
!!! TTCTTTTTTGATGGGATTTG+GGG + Chr8:90403848-90403867 MsG0880047750.01.T01:intron 30.0%
!!! TTTTTTGAAGGTAGGGTATT+GGG - Chr8:90402710-90402729 None:intergenic 30.0%
AACCATGAAGTATGTCAAGT+TGG + Chr8:90405023-90405042 MsG0880047750.01.T01:CDS 35.0%
AACCGTCATTTAATTAGGCA+TGG + Chr8:90403396-90403415 MsG0880047750.01.T01:intron 35.0%
AAGAAAAGGCAAAAGTAGTC+AGG - Chr8:90403661-90403680 None:intergenic 35.0%
AATGTGAATCCGTATCTTTC+TGG - Chr8:90400969-90400988 None:intergenic 35.0%
ACAAAATACCTATTGAAGGG+TGG - Chr8:90402736-90402755 None:intergenic 35.0%
ACAAAGTCAACAATCATCCA+TGG - Chr8:90404793-90404812 None:intergenic 35.0%
ACACACAAGCAAATTGAAAG+AGG - Chr8:90404336-90404355 None:intergenic 35.0%
ACCTTCTTTCTTCTCCTAAA+TGG - Chr8:90404595-90404614 None:intergenic 35.0%
ACTACTAATTCAAGAACACG+AGG - Chr8:90402807-90402826 None:intergenic 35.0%
ACTCTCTGTTCTTTCTACTT+AGG + Chr8:90402057-90402076 MsG0880047750.01.T01:intron 35.0%
AGAAGTCATGAGTGATTACA+GGG + Chr8:90400611-90400630 MsG0880047750.01.T01:CDS 35.0%
AGAGTGCATGAGTTGTTTAA+AGG + Chr8:90400666-90400685 MsG0880047750.01.T01:CDS 35.0%
AGCAAGGAGAATAAATTGGA+TGG - Chr8:90401698-90401717 None:intergenic 35.0%
AGGGAACTATCAACTTTCTT+GGG + Chr8:90404270-90404289 MsG0880047750.01.T01:CDS 35.0%
AGGTAAAAGAAGAGTTGACA+AGG - Chr8:90402787-90402806 None:intergenic 35.0%
AGTGGATATTTGATCATGAC+AGG + Chr8:90404541-90404560 MsG0880047750.01.T01:CDS 35.0%
ATAGCGTAATTTGATCAACG+TGG - Chr8:90401566-90401585 None:intergenic 35.0%
ATCTTCAACTTTCACCTCTA+AGG + Chr8:90401995-90402014 MsG0880047750.01.T01:intron 35.0%
ATGTCATACCACAAGTAACA+CGG - Chr8:90401974-90401993 None:intergenic 35.0%
ATTAAATGCCACCATAGACT+TGG - Chr8:90404983-90405002 None:intergenic 35.0%
CAAAGCAAATGTTAGACAAG+TGG - Chr8:90402656-90402675 None:intergenic 35.0%
CAAAGTCAACAATCATCCAT+GGG - Chr8:90404792-90404811 None:intergenic 35.0%
CAGACATATTTGTGTGCTTT+AGG + Chr8:90400333-90400352 MsG0880047750.01.T01:intron 35.0%
CAGAGATGGTATAAACATGT+CGG - Chr8:90401348-90401367 None:intergenic 35.0%
CCAACTATCTCTCTAATAGA+TGG + Chr8:90401770-90401789 MsG0880047750.01.T01:intron 35.0%
CCATCTATTAGAGAGATAGT+TGG - Chr8:90401773-90401792 None:intergenic 35.0%
CGTGACAAAATACCTATTGA+AGG - Chr8:90402740-90402759 None:intergenic 35.0%
CTCTCTGTTCTTTCTACTTA+GGG + Chr8:90402058-90402077 MsG0880047750.01.T01:intron 35.0%
CTGTTGCAAGATCATAAACA+AGG + Chr8:90400993-90401012 MsG0880047750.01.T01:CDS 35.0%
GAAGATAATGTAGTCCTGTT+TGG - Chr8:90402151-90402170 None:intergenic 35.0%
GAGATTTGGAAATGATATCG+AGG - Chr8:90404300-90404319 None:intergenic 35.0%
GATGTATTGGAGAGATTTCT+TGG + Chr8:90404381-90404400 MsG0880047750.01.T01:CDS 35.0%
GCAACGTGTATAGTTAAAAG+CGG - Chr8:90403292-90403311 None:intergenic 35.0%
GCAAGGATAAAAATCGAAAG+AGG + Chr8:90403434-90403453 MsG0880047750.01.T01:intron 35.0%
GCTTTCCACAAAAATTGTCT+AGG + Chr8:90402392-90402411 MsG0880047750.01.T01:intron 35.0%
GGAAAAAAAGAATGGTAGCA+GGG + Chr8:90404251-90404270 MsG0880047750.01.T01:CDS 35.0%
GGGCATTTCATAAGATGTAT+TGG + Chr8:90404368-90404387 MsG0880047750.01.T01:CDS 35.0%
GGTATAGTTAGATCGAGAAA+TGG - Chr8:90402997-90403016 None:intergenic 35.0%
GTCATCAAAGTCTAGAGATT+TGG - Chr8:90404314-90404333 None:intergenic 35.0%
GTGGATATTTGATCATGACA+GGG + Chr8:90404542-90404561 MsG0880047750.01.T01:CDS 35.0%
TAAACTACTAACCAGTCTCA+TGG - Chr8:90401259-90401278 None:intergenic 35.0%
TACTTCTTGCCAGAAAGATA+CGG + Chr8:90400957-90400976 MsG0880047750.01.T01:CDS 35.0%
TATCATGCGTTGAAGTAAGT+AGG + Chr8:90402487-90402506 MsG0880047750.01.T01:intron 35.0%
TATTAAACAAGTACTCCCTC+CGG - Chr8:90400119-90400138 None:intergenic 35.0%
TCATGTGACCTAATGTACTT+TGG - Chr8:90405204-90405223 None:intergenic 35.0%
TCCATTTAGGAGAAGAAAGA+AGG + Chr8:90404591-90404610 MsG0880047750.01.T01:CDS 35.0%
TCTCTGTTCTTTCTACTTAG+GGG + Chr8:90402059-90402078 MsG0880047750.01.T01:intron 35.0%
TGAAATCATACTTCCTCCAT+CGG + Chr8:90400737-90400756 MsG0880047750.01.T01:CDS 35.0%
TGTCATTGTTGTGATGCAAA+GGG + Chr8:90404230-90404249 MsG0880047750.01.T01:intron 35.0%
TGTTTATGATCTTGCAACAG+TGG - Chr8:90400993-90401012 None:intergenic 35.0%
TTCCAACTTGACATACTTCA+TGG - Chr8:90405028-90405047 None:intergenic 35.0%
TTGCTTGTGTGTGTAAGAAT+TGG + Chr8:90404344-90404363 MsG0880047750.01.T01:CDS 35.0%
TTGGTTAGGTATGCTGATAA+AGG - Chr8:90404461-90404480 None:intergenic 35.0%
TTGTCATTGTTGTGATGCAA+AGG + Chr8:90404229-90404248 MsG0880047750.01.T01:intron 35.0%
TTGTGTGTGTAAGAATTGGA+GGG + Chr8:90404348-90404367 MsG0880047750.01.T01:CDS 35.0%
TTTATGATCAGCGGTTGTTA+AGG + Chr8:90399717-90399736 MsG0880047750.01.T01:intron 35.0%
! GCTTTAAATAGACTAGGTCT+TGG - Chr8:90399946-90399965 None:intergenic 35.0%
! TAACTATACACGTTGCTTTC+GGG + Chr8:90403296-90403315 MsG0880047750.01.T01:intron 35.0%
! TGTTTTGTGGTTAGAAGAAC+AGG - Chr8:90402857-90402876 None:intergenic 35.0%
! TTGTGACGAACAACTTTTTG+TGG + Chr8:90404951-90404970 MsG0880047750.01.T01:CDS 35.0%
!! CAAATACTAGGTTCTAGGTT+AGG + Chr8:90401461-90401480 MsG0880047750.01.T01:intron 35.0%
!! GAACGATAAACTTGTTGGTT+AGG - Chr8:90404475-90404494 None:intergenic 35.0%
!! GCTTATTTTTCACTGCAAAC+GGG + Chr8:90403235-90403254 MsG0880047750.01.T01:intron 35.0%
!! GTATGTCAAGTTGGAAACTT+TGG + Chr8:90405032-90405051 MsG0880047750.01.T01:CDS 35.0%
!! TGGAAAGCTCTAGAGAAAAA+AGG - Chr8:90402380-90402399 None:intergenic 35.0%
!! TTTTGTTTACTTGATAGGGG+TGG + Chr8:90399894-90399913 MsG0880047750.01.T01:intron 35.0%
!!! GAAGGGTGGAAATTTTTTGA+AGG - Chr8:90402722-90402741 None:intergenic 35.0%
!!! GGTGGAAATTTTTTGAAGGT+AGG - Chr8:90402718-90402737 None:intergenic 35.0%
!!! TTCTCTGTCGTTTTGTACTA+TGG + Chr8:90401932-90401951 MsG0880047750.01.T01:intron 35.0%
AACGCAGATCAAAAGCTACA+TGG - Chr8:90405326-90405345 None:intergenic 40.0%
AAGGCTCAAGGAATTGATAC+GGG + Chr8:90401119-90401138 MsG0880047750.01.T01:CDS 40.0%
ACAAGCTGCCAAAGTACATT+AGG + Chr8:90405193-90405212 MsG0880047750.01.T01:CDS 40.0%
AGCCACTAAGACAAAATCCT+TGG - Chr8:90404692-90404711 None:intergenic 40.0%
AGCCGTGTTTCATGATAAGT+TGG + Chr8:90401058-90401077 MsG0880047750.01.T01:CDS 40.0%
AGTGTGATTTGATGTTCCTC+TGG - Chr8:90401218-90401237 None:intergenic 40.0%
ATAACAATAGGATTGCGCCA+AGG - Chr8:90402263-90402282 None:intergenic 40.0%
ATACGCGTTCACGAAGATAT+AGG + Chr8:90403205-90403224 MsG0880047750.01.T01:intron 40.0%
ATCACAAATCACAAGGCTCA+AGG + Chr8:90401107-90401126 MsG0880047750.01.T01:CDS 40.0%
ATCGCAATAAACCCACTGAT+CGG - Chr8:90399405-90399424 None:intergenic 40.0%
ATTATATGGTCGTCCTTCCT+TGG + Chr8:90402513-90402532 MsG0880047750.01.T01:intron 40.0%
ATTCAACAATGGGATACCCA+TGG + Chr8:90404773-90404792 MsG0880047750.01.T01:CDS 40.0%
CAAGGCTCAAGGAATTGATA+CGG + Chr8:90401118-90401137 MsG0880047750.01.T01:CDS 40.0%
CAGAAGTCATGAGTGATTAC+AGG + Chr8:90400610-90400629 MsG0880047750.01.T01:CDS 40.0%
CAGGGAACTATCAACTTTCT+TGG + Chr8:90404269-90404288 MsG0880047750.01.T01:CDS 40.0%
CAGTAGACACAATAACTAGG+AGG - Chr8:90403074-90403093 None:intergenic 40.0%
CATGCTAAACTGTTCGTCAT+AGG + Chr8:90399919-90399938 MsG0880047750.01.T01:intron 40.0%
CTCTGTTCTTTCTACTTAGG+GGG + Chr8:90402060-90402079 MsG0880047750.01.T01:intron 40.0%
CTCTTAGGTTACACTAAGGT+TGG - Chr8:90399857-90399876 None:intergenic 40.0%
CTTGTGTGTGTAAGAATTGG+AGG + Chr8:90404347-90404366 MsG0880047750.01.T01:CDS 40.0%
CTTTCATAACCCCACATGTT+CGG - Chr8:90405111-90405130 None:intergenic 40.0%
GCATATTCTGGATCTTCTAG+TGG + Chr8:90404523-90404542 MsG0880047750.01.T01:CDS 40.0%
GGGAAAAAAAGAATGGTAGC+AGG + Chr8:90404250-90404269 MsG0880047750.01.T01:intron 40.0%
TAAAAGAAAATCAGCGGCAG+CGG - Chr8:90399488-90399507 None:intergenic 40.0%
TAACAATAGGATTGCGCCAA+GGG - Chr8:90402262-90402281 None:intergenic 40.0%
TAAGCATACAACTCGGAGTT+AGG + Chr8:90402174-90402193 MsG0880047750.01.T01:intron 40.0%
TAGACACAATAACTAGGAGG+AGG - Chr8:90403071-90403090 None:intergenic 40.0%
TCATGGCAATGAAGCTCAAA+TGG - Chr8:90401242-90401261 None:intergenic 40.0%
TGCTTATAATAGTGACCGGA+GGG + Chr8:90400101-90400120 MsG0880047750.01.T01:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG - Chr8:90400120-90400101 None:intergenic 40.0%
TGGCGCAATCCTATTGTTAT+GGG + Chr8:90402263-90402282 MsG0880047750.01.T01:intron 40.0%
TGTCAAAAGCAAGCAAGACA+CGG - Chr8:90404663-90404682 None:intergenic 40.0%
TGTGCTCTTAGGTTACACTA+AGG - Chr8:90399861-90399880 None:intergenic 40.0%
TGTGGTTCATACCAAGTCTA+TGG + Chr8:90404969-90404988 MsG0880047750.01.T01:CDS 40.0%
TTACACTAAGGTTGGAGATG+TGG - Chr8:90399849-90399868 None:intergenic 40.0%
TTATATGGTCGTCCTTCCTT+GGG + Chr8:90402514-90402533 MsG0880047750.01.T01:intron 40.0%
TTATCCATGCTGATGGGATT+CGG + Chr8:90403687-90403706 MsG0880047750.01.T01:intron 40.0%
TTCATACTACAAGACCCTAC+TGG + Chr8:90405229-90405248 MsG0880047750.01.T01:CDS 40.0%
TTCTGGCACTTTGCATATTC+TGG + Chr8:90404511-90404530 MsG0880047750.01.T01:CDS 40.0%
TTGCTTATAATAGTGACCGG+AGG + Chr8:90400100-90400119 MsG0880047750.01.T01:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG - Chr8:90400119-90400100 None:intergenic 40.0%
TTGGCGCAATCCTATTGTTA+TGG + Chr8:90402262-90402281 MsG0880047750.01.T01:intron 40.0%
TTTCATAACCCCACATGTTC+GGG - Chr8:90405110-90405129 None:intergenic 40.0%
! AAACGGATCGTTGCTTTAGT+TGG + Chr8:90399612-90399631 MsG0880047750.01.T01:intron 40.0%
! AACGCATGATAGAGTGCTAT+AGG - Chr8:90402478-90402497 None:intergenic 40.0%
! CATGATAGAGTGCTATAGGA+TGG - Chr8:90402474-90402493 None:intergenic 40.0%
! CCTTGTTTCAAAAGCGGTAT+TGG + Chr8:90401540-90401559 MsG0880047750.01.T01:intron 40.0%
! CGATTCAGTTTTTCATCCGA+TGG - Chr8:90400756-90400775 None:intergenic 40.0%
! CTCCAAGGATTTTGTCTTAG+TGG + Chr8:90404687-90404706 MsG0880047750.01.T01:CDS 40.0%
! GACATGCAGATTTTACTGCA+TGG - Chr8:90400569-90400588 None:intergenic 40.0%
! GAGTGCCTAGACAATTTTTG+TGG - Chr8:90402400-90402419 None:intergenic 40.0%
! GCTAAGTAGTTCTACCTTAG+AGG - Chr8:90402012-90402031 None:intergenic 40.0%
! TATTTTTCACTGCAAACGGG+TGG + Chr8:90403238-90403257 MsG0880047750.01.T01:intron 40.0%
! TGTAGCTTTTGATCTGCGTT+TGG + Chr8:90405326-90405345 MsG0880047750.01.T01:three_prime_UTR 40.0%
! TTCAGTTTTTCATCCGATGG+AGG - Chr8:90400753-90400772 None:intergenic 40.0%
!! ACCAAGCCTTGTTTCAAAAG+CGG + Chr8:90401534-90401553 MsG0880047750.01.T01:intron 40.0%
!! AGGGCATGTCGATTTACTTT+CGG + Chr8:90400926-90400945 MsG0880047750.01.T01:CDS 40.0%
!! ATCAAACAAAGCATCGCTTG+TGG - Chr8:90400529-90400548 None:intergenic 40.0%
!! GATGCTTTGTTTGATGATGC+AGG + Chr8:90400534-90400553 MsG0880047750.01.T01:CDS 40.0%
!! GTCTTGCTTGCTTTTGACAA+AGG + Chr8:90404664-90404683 MsG0880047750.01.T01:CDS 40.0%
!!! ATTTTGGTGCTGCATGTTGT+TGG - Chr8:90401409-90401428 None:intergenic 40.0%
!!! CCAATACCGCTTTTGAAACA+AGG - Chr8:90401543-90401562 None:intergenic 40.0%
!!! GTTTAGGTGGTTTTGTAGCA+AGG - Chr8:90401714-90401733 None:intergenic 40.0%
!!! TTTTGGTGCTGCATGTTGTT+GGG - Chr8:90401408-90401427 None:intergenic 40.0%
AAAAGACCAGTCCAACCAGT+AGG - Chr8:90405247-90405266 None:intergenic 45.0%
AAAGACCAGTCCAACCAGTA+GGG - Chr8:90405246-90405265 None:intergenic 45.0%
AAAGCGGAGTCAAATGAGCA+AGG - Chr8:90403276-90403295 None:intergenic 45.0%
AAGCGGAGTCAAATGAGCAA+GGG - Chr8:90403275-90403294 None:intergenic 45.0%
AAGGCATAGTAGTTTCCACC+CGG - Chr8:90405081-90405100 None:intergenic 45.0%
ACTAAGGTTGGAGATGTGGA+TGG - Chr8:90399845-90399864 None:intergenic 45.0%
ACTCATCATATCCCGATCAG+TGG + Chr8:90399390-90399409 MsG0880047750.01.T01:five_prime_UTR 45.0%
ACTCTTGCTTTGACACCTCT+TGG - Chr8:90400651-90400670 None:intergenic 45.0%
ACTGATCGGGATATGATGAG+TGG - Chr8:90399391-90399410 None:intergenic 45.0%
AGACTTAAGACAAGCCGTAG+AGG - Chr8:90402096-90402115 None:intergenic 45.0%
ATTCGAGAGAGGAACTGAGT+GGG - Chr8:90402126-90402145 None:intergenic 45.0%
CGTCACAACTAACCAACCTT+AGG - Chr8:90404939-90404958 None:intergenic 45.0%
CTCATCATATCCCGATCAGT+GGG + Chr8:90399391-90399410 MsG0880047750.01.T01:five_prime_UTR 45.0%
GAGTTGACAAGGATGAGCAA+TGG - Chr8:90402776-90402795 None:intergenic 45.0%
GATGGACGAATTGATCCAAG+AGG + Chr8:90400633-90400652 MsG0880047750.01.T01:CDS 45.0%
GCATTATTATATGCTCCGGG+TGG + Chr8:90405063-90405082 MsG0880047750.01.T01:CDS 45.0%
GGTTCATACCAAGTCTATGG+TGG + Chr8:90404972-90404991 MsG0880047750.01.T01:CDS 45.0%
GTCATGAGTGATTACAGGGA+TGG + Chr8:90400615-90400634 MsG0880047750.01.T01:CDS 45.0%
TAACTTCTTTGTCGCGCCTA+AGG + Chr8:90404920-90404939 MsG0880047750.01.T01:CDS 45.0%
TACAACTCGGAGTTAGGTCT+TGG + Chr8:90402180-90402199 MsG0880047750.01.T01:intron 45.0%
TACTACAAGACCCTACTGGT+TGG + Chr8:90405233-90405252 MsG0880047750.01.T01:CDS 45.0%
TATCCATGCTGATGGGATTC+GGG + Chr8:90403688-90403707 MsG0880047750.01.T01:intron 45.0%
TCAACGACAAGGGCAACATA+GGG + Chr8:90404839-90404858 MsG0880047750.01.T01:CDS 45.0%
TCGCAATAAACCCACTGATC+GGG - Chr8:90399404-90399423 None:intergenic 45.0%
TGGATGTCTCTTGTGCTCTT+AGG - Chr8:90399872-90399891 None:intergenic 45.0%
TTACTTTGACCTACTCCCTC+CGG + Chr8:90399966-90399985 MsG0880047750.01.T01:intron 45.0%
! AGTTTGGAGCACATCAGAGA+TGG - Chr8:90401362-90401381 None:intergenic 45.0%
! TGCTTTTGACAAAGGCTCCA+AGG + Chr8:90404672-90404691 MsG0880047750.01.T01:CDS 45.0%
!! AATTGATACGGGAGGTGTTG+CGG + Chr8:90401130-90401149 MsG0880047750.01.T01:CDS 45.0%
!! GGGCATGTCGATTTACTTTC+GGG + Chr8:90400927-90400946 MsG0880047750.01.T01:CDS 45.0%
!! GGTATTGGCTATGCATAGCA+AGG + Chr8:90403417-90403436 MsG0880047750.01.T01:intron 45.0%
!! TTTGAAGGTAGGGTATTGGG+TGG - Chr8:90402707-90402726 None:intergenic 45.0%
!!! ACCGCTTTTGAAACAAGGCT+TGG - Chr8:90401538-90401557 None:intergenic 45.0%
!!! TATTTGATTTTATTTTTTAT+TGG + Chr8:90404176-90404195 MsG0880047750.01.T01:intron 5.0%
AGGGAGTTTCGACTAGTGTG+AGG - Chr8:90402316-90402335 None:intergenic 50.0%
ATCCATGCTGATGGGATTCG+GGG + Chr8:90403689-90403708 MsG0880047750.01.T01:intron 50.0%
ATGAGCAATGGCAAAGCAGC+TGG - Chr8:90402764-90402783 None:intergenic 50.0%
ATTCAATGCCTTGCTGCCAG+AGG + Chr8:90401199-90401218 MsG0880047750.01.T01:CDS 50.0%
CCTCTCTCGAATCTCCAAAC+AGG + Chr8:90402134-90402153 MsG0880047750.01.T01:intron 50.0%
CCTGTTTGGAGATTCGAGAG+AGG - Chr8:90402137-90402156 None:intergenic 50.0%
CGCGACAAAGAAGTTACGCT+AGG - Chr8:90404916-90404935 None:intergenic 50.0%
CGGGGTCAGTAAAAGGCTAA+AGG + Chr8:90403707-90403726 MsG0880047750.01.T01:intron 50.0%
CTTGAGCAACCCGAACATGT+GGG + Chr8:90405098-90405117 MsG0880047750.01.T01:CDS 50.0%
GAACAGGCTATGCATCAGAG+AGG - Chr8:90402841-90402860 None:intergenic 50.0%
GAGCTTCATTGCCATGAGAC+TGG + Chr8:90401245-90401264 MsG0880047750.01.T01:CDS 50.0%
GATTCGAGAGAGGAACTGAG+TGG - Chr8:90402127-90402146 None:intergenic 50.0%
GCTCAAGGAATTGATACGGG+AGG + Chr8:90401122-90401141 MsG0880047750.01.T01:CDS 50.0%
GGGGAAGTCATACACCTCTA+CGG + Chr8:90402079-90402098 MsG0880047750.01.T01:intron 50.0%
GTCAACGACAAGGGCAACAT+AGG + Chr8:90404838-90404857 MsG0880047750.01.T01:CDS 50.0%
TAATAGTGACCGGAGGGAGT+AGG - Chr8:90400126-90400107 None:intergenic 50.0%
TGGGATTCGGGGTCAGTAAA+AGG + Chr8:90403700-90403719 MsG0880047750.01.T01:intron 50.0%
TTCTTTGTCGCGCCTAAGGT+TGG + Chr8:90404924-90404943 MsG0880047750.01.T01:CDS 50.0%
TTGAGCAACCCGAACATGTG+GGG + Chr8:90405099-90405118 MsG0880047750.01.T01:CDS 50.0%
TTGATGTTCCTCTGGCAGCA+AGG - Chr8:90401210-90401229 None:intergenic 50.0%
! AGAAAACCGACTCAAGCCCA+AGG - Chr8:90402533-90402552 None:intergenic 50.0%
AAGGGTTCAGGGTTGACCCT+TGG + Chr8:90402243-90402262 MsG0880047750.01.T01:intron 55.0%
CCTTGAGCAACCCGAACATG+TGG + Chr8:90405097-90405116 MsG0880047750.01.T01:CDS 55.0%
CGGCAGACACCAAAGGAACT+AGG - Chr8:90399468-90399487 None:intergenic 55.0%
GTCCTTCCTTGGGCTTGAGT+CGG + Chr8:90402524-90402543 MsG0880047750.01.T01:intron 55.0%
TTCGACTAGTGTGAGGACGC+AGG - Chr8:90402309-90402328 None:intergenic 55.0%
! AACCGACTCAAGCCCAAGGA+AGG - Chr8:90402529-90402548 None:intergenic 55.0%
! CAAGACCCTACTGGTTGGAC+TGG + Chr8:90405238-90405257 MsG0880047750.01.T01:CDS 55.0%
! GCAAACGGGTGGTAGTGTAG+CGG + Chr8:90403249-90403268 MsG0880047750.01.T01:intron 55.0%
! TCGCGTCGACCTAGTTCCTT+TGG + Chr8:90399456-90399475 MsG0880047750.01.T01:five_prime_UTR 55.0%
!! CCACATGTTCGGGTTGCTCA+AGG - Chr8:90405100-90405119 None:intergenic 55.0%
GACCCCGAATCCCATCAGCA+TGG - Chr8:90403694-90403713 None:intergenic 60.0%
GCGGCAGCGGCAGACACCAA+AGG - Chr8:90399475-90399494 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr8 gene 90399380 90405439 90399380 ID=MsG0880047750.01;Name=MsG0880047750.01
Chr8 mRNA 90399380 90405439 90399380 ID=MsG0880047750.01.T01;Parent=MsG0880047750.01;Name=MsG0880047750.01.T01;_AED=0.49;_eAED=0.49;_QI=186|1|1|1|0.5|0.33|3|131|602
Chr8 exon 90399380 90399546 90399380 ID=MsG0880047750.01.T01:exon:18264;Parent=MsG0880047750.01.T01
Chr8 exon 90400497 90401266 90400497 ID=MsG0880047750.01.T01:exon:18265;Parent=MsG0880047750.01.T01
Chr8 exon 90404251 90405439 90404251 ID=MsG0880047750.01.T01:exon:18266;Parent=MsG0880047750.01.T01
Chr8 five_prime_UTR 90399380 90399546 90399380 ID=MsG0880047750.01.T01:five_prime_utr;Parent=MsG0880047750.01.T01
Chr8 five_prime_UTR 90400497 90400515 90400497 ID=MsG0880047750.01.T01:five_prime_utr;Parent=MsG0880047750.01.T01
Chr8 CDS 90400516 90401266 90400516 ID=MsG0880047750.01.T01:cds;Parent=MsG0880047750.01.T01
Chr8 CDS 90404251 90405308 90404251 ID=MsG0880047750.01.T01:cds;Parent=MsG0880047750.01.T01
Chr8 three_prime_UTR 90405309 90405439 90405309 ID=MsG0880047750.01.T01:three_prime_utr;Parent=MsG0880047750.01.T01
Gene Sequence

>MsG0880047750.01.T01

ATGAATAGCTCCACAAGCGATGCTTTGTTTGATGATGCAGGTGCGTATGACCATGCAGTAAAATCTGCATGTCAAGAAAAGTATTCTGAATTTGCAGAAGTCATGAGTGATTACAGGGATGGACGAATTGATCCAAGAGGTGTCAAAGCAAGAGTGCATGAGTTGTTTAAAGGCCATAAACATTTAATTTTGGGAATCAACAACATCATGCCAAAGAATTATGAAATCATACTTCCTCCATCGGATGAAAAACTGAATCGACAAGATGCAACAACTTTTCTCAAACAAGTAAAAGTTGTGTTTCAAGATAAGATGGAAAAATATTATGAGTTTCTACAAGTCATACAAGACTACATGAATCTCACAATTGATATATTAGATGTCATCAAAATTGCGATGAAGCTATTTAAAGGGCATGTCGATTTACTTTCGGGATTCAACTACTTCTTGCCAGAAAGATACGGATTCACATTTCCACTGTTGCAAGATCATAAACAAGGTCATCAATTAGTGATAAAAGATGCATTTCTCAATGAAGTCAAAGCCGTGTTTCATGATAAGTTGGAAAAATATTTTGAGTTTTTACAAGTTATCACAAATCACAAGGCTCAAGGAATTGATACGGGAGGTGTTGCGGCAATAGTGAAAGAGTTATTTAAAGACCATACAAATTTAATTTTGGGATTCAATGCCTTGCTGCCAGAGGAACATCAAATCACACTTCCATTTGAGCTTCATTGCCATGAGACTGGGAAAAAAAGAATGGTAGCAGGGAACTATCAACTTTCTTGGGATGTCCTCGATATCATTTCCAAATCTCTAGACTTTGATGACCTCTTTCAATTTGCTTGTGTGTGTAAGAATTGGAGGGCATTTCATAAGATGTATTGGAGAGATTTCTTGGCATTACAAGAACCATTACTTGTTCAAAAGTCTTCCTTTTTCAAGAAATCTTTTTCCTTTATCAGCATACCTAACCAACAAGTTTATCGTTCAAAGATGATCAATTATTTCTGGCACTTTGCATATTCTGGATCTTCTAGTGGATATTTGATCATGACAGGGAACAATAATTCATTTTTGCTAATGAATCCATTTAGGAGAAGAAAGAAGGTAATCAATGCCCCAACCTTTAAAGTCAATTTTTCTTATTTTGCTTACCGTGTCTTGCTTGCTTTTGACAAAGGCTCCAAGGATTTTGTCTTAGTGGCTTTATGTAAAAGTTCTAATAGTTTGCATGTTTATCAATCTCGAAATTTTGGTTGGGTTACTTATTCAACAATGGGATACCCATGGATGATTGTTGACTTTGTTGTTTTGCATAACACTATATATGTTGTCAACGACAAGGGCAACATAGGGATACTCAACTTAAATTATGTGAATATAAAATTTTTAGAAATGAAGAGTATTCCTAGCGTAACTTCTTTGTCGCGCCTAAGGTTGGTTAGTTGTGACGAACAACTTTTTGTGGTTCATACCAAGTCTATGGTGGCATTTAATGTGTACAAGATTGACTTCTCAACCATGAAGTATGTCAAGTTGGAAACTTTGGGTGACATTGCATTATTATATGCTCCGGGTGGAAACTACTATGCCTTGAGCAACCCGAACATGTGGGGTTATGAAAGCAACTCTGTATATGTTATCGATCATTCGTCTACAAAATGCAAAGTGTATGTAGGGGATGACAACAAGCTGCCAAAGTACATTAGGTCACATGATGATCTTCATACTACAAGACCCTACTGGTTGGACTGGTCTTTTAGACATTTTCACTACGAGATAGATTATTCTCTAGTTGACTAA
Protein sequence

>MsG0880047750.01.T01

MNSSTSDALFDDAGAYDHAVKSACQEKYSEFAEVMSDYRDGRIDPRGVKARVHELFKGHKHLILGINNIMPKNYEIILPPSDEKLNRQDATTFLKQVKVVFQDKMEKYYEFLQVIQDYMNLTIDILDVIKIAMKLFKGHVDLLSGFNYFLPERYGFTFPLLQDHKQGHQLVIKDAFLNEVKAVFHDKLEKYFEFLQVITNHKAQGIDTGGVAAIVKELFKDHTNLILGFNALLPEEHQITLPFELHCHETGKKRMVAGNYQLSWDVLDIISKSLDFDDLFQFACVCKNWRAFHKMYWRDFLALQEPLLVQKSSFFKKSFSFISIPNQQVYRSKMINYFWHFAYSGSSSGYLIMTGNNNSFLLMNPFRRRKKVINAPTFKVNFSYFAYRVLLAFDKGSKDFVLVALCKSSNSLHVYQSRNFGWVTYSTMGYPWMIVDFVVLHNTIYVVNDKGNIGILNLNYVNIKFLEMKSIPSVTSLSRLRLVSCDEQLFVVHTKSMVAFNVYKIDFSTMKYVKLETLGDIALLYAPGGNYYALSNPNMWGYESNSVYVIDHSSTKCKVYVGDDNKLPKYIRSHDDLHTTRPYWLDWSFRHFHYEIDYSLVD*