AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG000247

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG000247 MtrunA17_Chr1g0154031 92.143 420 25 4 1 416 1 416 0.0 733
MsaG000247 MtrunA17_Chr3g0080861 38.253 332 176 7 47 359 15 336 1.88e-58 200
MsaG000247 MtrunA17_Chr8g0354661 70.161 124 37 0 73 196 37 160 4.63e-56 194
MsaG000247 MtrunA17_Chr3g0099131 70.085 117 35 0 71 187 39 155 7.82e-55 191
MsaG000247 MtrunA17_Chr2g0322521 57.419 155 60 1 39 193 1 149 5.47e-52 180
MsaG000247 MtrunA17_Chr1g0192411 47.222 180 84 3 73 241 12 191 1.23e-47 169
MsaG000247 MtrunA17_Chr5g0395281 64.486 107 38 0 70 176 9 115 2.71e-44 157
MsaG000247 MtrunA17_Chr4g0039971 63.551 107 39 0 70 176 10 116 4.43e-44 158
MsaG000247 MtrunA17_Chr7g0274581 59.048 105 43 0 72 176 11 115 1.21e-43 152
MsaG000247 MtrunA17_Chr7g0261281 62.857 105 39 0 72 176 11 115 3.72e-43 153
MsaG000247 MtrunA17_Chr1g0187761 60.952 105 41 0 72 176 11 115 5.45e-43 152
MsaG000247 MtrunA17_Chr3g0115821 60.748 107 42 0 70 176 9 115 7.11e-43 154
MsaG000247 MtrunA17_Chr5g0410961 61.682 107 41 0 70 176 9 115 7.71e-43 154
MsaG000247 MtrunA17_Chr2g0281071 61.905 105 40 0 72 176 12 116 8.46e-43 154
MsaG000247 MtrunA17_Chr8g0349261 63.208 106 38 1 72 176 12 117 9.88e-43 152
MsaG000247 MtrunA17_Chr7g0228231 53.906 128 46 1 48 175 2 116 1.29e-41 147
MsaG000247 MtrunA17_Chr4g0048511 60.000 105 42 0 72 176 12 116 2.20e-41 150
MsaG000247 MtrunA17_Chr1g0167691 60.000 105 42 0 72 176 11 115 2.30e-41 148
MsaG000247 MtrunA17_Chr6g0450101 62.136 103 39 0 73 175 14 116 3.15e-41 146
MsaG000247 MtrunA17_Chr5g0440781 44.000 175 84 4 74 247 13 174 3.37e-41 145
MsaG000247 MtrunA17_Chr1g0209661 52.632 114 54 0 65 178 19 132 6.20e-41 148
MsaG000247 MtrunA17_Chr5g0440761 44.000 175 84 4 74 247 13 174 1.00e-40 146
MsaG000247 MtrunA17_Chr1g0168661 60.000 105 42 0 74 178 22 126 1.03e-40 146
MsaG000247 MtrunA17_Chr5g0441141 44.000 175 84 4 74 247 13 174 1.10e-40 146
MsaG000247 MtrunA17_Chr1g0193801 62.264 106 40 0 73 178 12 117 1.19e-40 149
MsaG000247 MtrunA17_Chr1g0203411 59.091 110 45 0 72 181 11 120 1.25e-40 147
MsaG000247 MtrunA17_Chr7g0270891 62.264 106 40 0 73 178 12 117 1.55e-40 149
MsaG000247 MtrunA17_Chr8g0346561 59.633 109 44 0 72 180 11 119 2.12e-40 146
MsaG000247 MtrunA17_Chr2g0323411 58.879 107 44 0 70 176 9 115 2.18e-40 147
MsaG000247 MtrunA17_Chr4g0022911 53.333 120 56 0 72 191 12 131 3.22e-40 145
MsaG000247 MtrunA17_Chr1g0186061 55.462 119 53 0 60 178 7 125 3.56e-40 145
MsaG000247 MtrunA17_Chr1g0194301 57.547 106 45 0 73 178 33 138 3.93e-40 145
MsaG000247 MtrunA17_Chr7g0275911 58.095 105 44 0 72 176 11 115 4.36e-40 144
MsaG000247 MtrunA17_Chr1g0193371 61.321 106 41 0 73 178 12 117 4.36e-40 147
MsaG000247 MtrunA17_Chr1g0167661 59.048 105 43 0 72 176 11 115 4.40e-40 144
MsaG000247 MtrunA17_Chr4g0022901 50.000 130 63 1 70 197 10 139 6.28e-40 144
MsaG000247 MtrunA17_Chr3g0099141 69.318 88 27 0 70 157 37 124 7.81e-40 140
MsaG000247 MtrunA17_Chr4g0022931 47.727 132 69 0 70 201 10 141 9.50e-40 144
MsaG000247 MtrunA17_Chr4g0032401 55.752 113 50 0 64 176 8 120 1.40e-39 145
MsaG000247 MtrunA17_Chr4g0058631 60.577 104 41 0 73 176 12 115 2.66e-39 145
MsaG000247 MtrunA17_Chr3g0117091 59.615 104 42 0 73 176 12 115 3.06e-39 145
MsaG000247 MtrunA17_Chr2g0330041 58.654 104 43 0 73 176 12 115 3.82e-39 145
MsaG000247 MtrunA17_Chr2g0323351 57.547 106 45 0 70 175 9 114 4.12e-39 142
MsaG000247 MtrunA17_Chr4g0042671 57.143 105 45 0 72 176 11 115 4.60e-39 145
MsaG000247 MtrunA17_Chr3g0121241 56.190 105 46 0 72 176 41 145 6.38e-39 142
MsaG000247 MtrunA17_Chr1g0194291 55.963 109 48 0 70 178 18 126 8.47e-39 141
MsaG000247 MtrunA17_Chr7g0217741 56.190 105 46 0 72 176 11 115 1.01e-38 142
MsaG000247 MtrunA17_Chr4g0068061 57.143 105 45 0 72 176 11 115 1.78e-38 142
MsaG000247 MtrunA17_Chr2g0311221 61.616 99 38 0 73 171 14 112 1.86e-38 142
MsaG000247 MtrunA17_Chr1g0211161 57.692 104 44 0 73 176 13 116 1.91e-38 139
MsaG000247 MtrunA17_Chr7g0254411 59.048 105 43 0 72 176 11 115 2.56e-38 142
MsaG000247 MtrunA17_Chr4g0022881 53.153 111 52 0 70 180 9 119 3.40e-38 139
MsaG000247 MtrunA17_Chr8g0342541 56.731 104 45 0 73 176 12 115 4.07e-38 142
MsaG000247 MtrunA17_Chr8g0334881 54.386 114 51 1 66 178 3 116 4.26e-38 141
MsaG000247 MtrunA17_Chr3g0088461 58.654 104 43 0 73 176 22 125 4.67e-38 141
MsaG000247 MtrunA17_Chr2g0328771 57.692 104 44 0 73 176 20 123 6.49e-38 140
MsaG000247 MtrunA17_Chr8g0342521 57.692 104 44 0 73 176 12 115 6.64e-38 141
MsaG000247 MtrunA17_Chr7g0271241 62.245 98 37 0 73 170 12 109 8.05e-38 142
MsaG000247 MtrunA17_Chr7g0217221 57.143 105 45 0 72 176 11 115 9.73e-38 139
MsaG000247 MtrunA17_Chr3g0110351 56.190 105 46 0 72 176 11 115 2.59e-37 139
MsaG000247 MtrunA17_Chr4g0057031 56.190 105 46 0 72 176 11 115 2.68e-37 137
MsaG000247 MtrunA17_Chr4g0060721 56.190 105 46 0 72 176 12 116 2.79e-37 139
MsaG000247 MtrunA17_Chr2g0309911 55.769 104 46 0 73 176 11 114 2.91e-37 138
MsaG000247 MtrunA17_Chr8g0385321 59.804 102 41 0 75 176 14 115 3.41e-37 138
MsaG000247 MtrunA17_Chr6g0453211 59.000 100 41 0 72 171 11 110 4.67e-37 138
MsaG000247 MtrunA17_Chr5g0434571 55.140 107 48 0 72 178 47 153 6.07e-37 139
MsaG000247 MtrunA17_Chr6g0453471 55.238 105 47 0 72 176 11 115 7.07e-37 139
MsaG000247 MtrunA17_Chr3g0092401 56.190 105 46 0 72 176 12 116 1.24e-36 137
MsaG000247 MtrunA17_Chr4g0013361 54.310 116 51 2 71 185 8 122 1.27e-36 136
MsaG000247 MtrunA17_Chr4g0037141 56.863 102 44 0 75 176 14 115 1.36e-36 136
MsaG000247 MtrunA17_Chr7g0228891 57.143 105 45 0 72 176 11 115 1.64e-36 135
MsaG000247 MtrunA17_Chr8g0387421 55.660 106 47 0 73 178 12 117 1.64e-36 137
MsaG000247 MtrunA17_Chr3g0131121 58.824 102 42 0 75 176 14 115 1.90e-36 136
MsaG000247 MtrunA17_Chr5g0441131 49.593 123 61 1 74 195 10 132 2.23e-36 132
MsaG000247 MtrunA17_Chr4g0070611 55.238 105 47 0 72 176 11 115 2.46e-36 135
MsaG000247 MtrunA17_Chr5g0417821 57.143 105 45 0 72 176 6 110 6.19e-36 134
MsaG000247 MtrunA17_Chr4g0070641 55.238 105 47 0 72 176 11 115 8.65e-36 130
MsaG000247 MtrunA17_Chr1g0180391 54.717 106 48 0 71 176 17 122 1.10e-35 132
MsaG000247 MtrunA17_Chr5g0397231 57.576 99 42 0 73 171 12 110 1.89e-35 134
MsaG000247 MtrunA17_Chr1g0194951 56.190 105 46 0 72 176 11 115 2.79e-35 134
MsaG000247 MtrunA17_Chr5g0435101 51.923 104 50 0 73 176 11 114 4.28e-35 130
MsaG000247 MtrunA17_Chr2g0327821 51.887 106 51 0 73 178 6 111 7.71e-35 130
MsaG000247 MtrunA17_Chr4g0022891 45.000 140 72 2 70 209 9 143 7.87e-35 130
MsaG000247 MtrunA17_Chr8g0342481 54.286 105 47 1 73 176 12 116 8.22e-35 134
MsaG000247 MtrunA17_Chr6g0452271 45.324 139 75 1 73 210 12 150 2.06e-34 131
MsaG000247 MtrunA17_Chr2g0293911 54.128 109 50 0 70 178 21 129 1.33e-33 129
MsaG000247 MtrunA17_Chr4g0030881 50.909 110 47 1 74 176 8 117 1.38e-33 127
MsaG000247 MtrunA17_Chr4g0068921 56.311 103 45 0 73 175 24 126 2.36e-33 124
MsaG000247 MtrunA17_Chr4g0044421 51.961 102 49 0 75 176 14 115 3.43e-33 124
MsaG000247 MtrunA17_Chr1g0151941 50.476 105 51 1 73 176 12 116 3.44e-33 125
MsaG000247 MtrunA17_Chr4g0055981 46.094 128 66 2 73 199 55 180 3.77e-33 125
MsaG000247 MtrunA17_Chr1g0203441 54.369 103 47 0 74 176 14 116 6.34e-33 125
MsaG000247 MtrunA17_Chr8g0343831 51.923 104 50 0 73 176 8 111 6.39e-33 125
MsaG000247 MtrunA17_Chr3g0103281 51.923 104 50 0 73 176 12 115 1.74e-32 125
MsaG000247 MtrunA17_Chr1g0152011 50.000 108 53 1 70 176 9 116 5.02e-32 125
MsaG000247 MtrunA17_Chr3g0135311 38.509 161 92 2 73 232 12 166 1.13e-31 124
MsaG000247 MtrunA17_Chr6g0470971 51.456 103 50 0 74 176 15 117 1.23e-31 122
MsaG000247 MtrunA17_Chr4g0028311 50.926 108 52 1 73 179 12 119 1.38e-31 123
MsaG000247 MtrunA17_Chr7g0269831 58.095 105 44 0 72 176 11 115 1.60e-31 124
MsaG000247 MtrunA17_Chr8g0360111 51.485 101 49 0 71 171 23 123 1.82e-31 121
MsaG000247 MtrunA17_Chr7g0247131 63.415 82 29 1 105 186 10 90 2.34e-31 121
MsaG000247 MtrunA17_Chr5g0400821 49.074 108 54 1 70 176 9 116 7.16e-31 121
MsaG000247 MtrunA17_Chr2g0327351 51.456 103 49 1 70 171 9 111 8.16e-31 121
MsaG000247 MtrunA17_Chr5g0434841 51.429 105 51 0 72 176 19 123 1.06e-30 120
MsaG000247 MtrunA17_Chr5g0434931 47.619 105 55 0 72 176 34 138 1.90e-30 119
MsaG000247 MtrunA17_Chr4g0054391 50.980 102 49 1 70 170 9 110 2.16e-30 119
MsaG000247 MtrunA17_Chr5g0434911 48.571 105 54 0 72 176 20 124 4.13e-30 118
MsaG000247 MtrunA17_Chr7g0220341 47.664 107 54 1 72 176 24 130 4.51e-30 118
MsaG000247 MtrunA17_Chr7g0264641 46.296 108 57 1 70 176 9 116 9.15e-30 117
MsaG000247 MtrunA17_Chr5g0434831 49.524 105 53 0 72 176 6 110 1.04e-29 114
MsaG000247 MtrunA17_Chr7g0240821 48.000 100 52 0 77 176 5 104 1.63e-29 115
MsaG000247 MtrunA17_Chr6g0487491 47.414 116 52 2 73 179 12 127 2.00e-29 115
MsaG000247 MtrunA17_Chr4g0072751 49.515 103 51 1 70 171 9 111 5.40e-29 117
MsaG000247 MtrunA17_Chr5g0401731 51.961 102 48 1 75 176 15 115 1.55e-27 112
MsaG000247 MtrunA17_Chr7g0228991 45.714 105 57 0 72 176 28 132 1.90e-27 110
MsaG000247 MtrunA17_Chr6g0454921 50.980 102 49 1 75 176 15 115 4.09e-27 108
MsaG000247 MtrunA17_Chr4g0008551 50.962 104 48 2 75 177 38 139 5.77e-27 111
MsaG000247 MtrunA17_Chr4g0053431 50.000 102 50 1 75 176 5 105 9.84e-27 108
MsaG000247 MtrunA17_Chr2g0323321 44.444 108 52 2 72 179 10 109 2.34e-26 102
MsaG000247 MtrunA17_Chr5g0395221 55.556 81 36 0 69 149 8 88 3.57e-26 101
MsaG000247 MtrunA17_Chr4g0042611 51.948 77 37 0 73 149 12 88 4.88e-26 101
MsaG000247 MtrunA17_Chr7g0238631 51.923 104 49 1 73 176 111 213 5.81e-26 110
MsaG000247 MtrunA17_Chr2g0294811 53.846 78 36 0 72 149 11 88 9.02e-26 101
MsaG000247 MtrunA17_Chr5g0429661 46.667 105 53 2 73 176 120 222 1.91e-25 107
MsaG000247 MtrunA17_Chr6g0453751 54.348 92 33 2 72 154 19 110 2.11e-25 100
MsaG000247 MtrunA17_Chr3g0139671 49.038 104 52 1 73 176 83 185 4.84e-25 108
MsaG000247 MtrunA17_Chr1g0157731 48.077 104 53 1 73 176 89 191 5.00e-25 108
MsaG000247 MtrunA17_Chr7g0228531 40.141 142 70 4 44 180 197 328 6.25e-25 106
MsaG000247 MtrunA17_Chr4g0058991 46.667 105 53 2 73 176 207 309 1.70e-24 105
MsaG000247 MtrunA17_Chr3g0133601 46.078 102 54 1 75 176 37 137 1.79e-24 101
MsaG000247 MtrunA17_Chr5g0425591 53.659 82 37 1 74 154 10 91 5.05e-24 95.9
MsaG000247 MtrunA17_Chr8g0342511 52.632 76 36 0 73 148 12 87 6.98e-24 95.5
MsaG000247 MtrunA17_Chr8g0342531 48.193 83 43 0 73 155 12 94 1.11e-23 97.4
MsaG000247 MtrunA17_Chr3g0117511 43.363 113 58 2 75 182 183 294 1.38e-23 102
MsaG000247 MtrunA17_Chr5g0437321 52.381 105 48 2 68 171 11 114 1.89e-23 99.8
MsaG000247 MtrunA17_Chr6g0480581 42.857 112 63 1 75 186 4 114 1.03e-22 96.7
MsaG000247 MtrunA17_Chr4g0042501 39.161 143 81 3 46 184 73 213 1.12e-22 100
MsaG000247 MtrunA17_Chr5g0417621 47.619 105 52 2 75 178 134 236 1.72e-22 99.8
MsaG000247 MtrunA17_Chr7g0228481 45.133 113 55 4 73 180 218 328 4.90e-22 98.2
MsaG000247 MtrunA17_Chr3g0125801 43.307 127 64 3 75 195 16 140 5.93e-22 95.9
MsaG000247 MtrunA17_Chr8g0342461 50.633 79 38 1 73 150 12 90 1.08e-21 90.9
MsaG000247 MtrunA17_Chr7g0228401 42.727 110 62 1 86 195 290 398 2.46e-21 96.7
MsaG000247 MtrunA17_Chr8g0342471 49.367 79 39 1 73 150 12 90 4.07e-21 89.4
MsaG000247 MtrunA17_Chr5g0397841 46.939 98 51 1 73 170 108 204 2.95e-20 93.2
MsaG000247 MtrunA17_Chr7g0254261 43.636 110 61 1 75 184 89 197 7.29e-20 90.9
MsaG000247 MtrunA17_Chr1g0193901 59.524 84 32 2 73 154 11 94 7.92e-20 84.7
MsaG000247 MtrunA17_Chr1g0193891 59.524 84 32 2 73 154 11 94 7.92e-20 84.7
MsaG000247 MtrunA17_Chr1g0193871 59.524 84 32 2 73 154 11 94 7.92e-20 84.7
MsaG000247 MtrunA17_Chr1g0193881 59.524 84 32 2 73 154 11 94 7.92e-20 84.7
MsaG000247 MtrunA17_Chr7g0238651 42.718 103 57 1 78 178 10 112 2.21e-19 89.4
MsaG000247 MtrunA17_Chr6g0460671 35.606 132 81 2 47 178 74 201 6.15e-19 87.8
MsaG000247 MtrunA17_Chr6g0460661 38.462 104 63 1 75 178 16 118 1.43e-18 82.8
MsaG000247 MtrunA17_Chr7g0229101 48.571 70 36 0 105 174 4 73 1.45e-18 84.0
MsaG000247 MtrunA17_Chr1g0177901 48.276 87 44 1 85 171 4 89 1.49e-18 84.0
MsaG000247 MtrunA17_Chr7g0229131 47.887 71 37 0 105 175 4 74 9.56e-18 80.9
MsaG000247 MtrunA17_Chr5g0434901 47.059 68 36 0 107 174 7 74 1.35e-17 78.6
MsaG000247 MtrunA17_Chr3g0093811 48.611 72 37 0 105 176 14 85 2.66e-17 81.6
MsaG000247 MtrunA17_Chr7g0233061 43.299 97 52 2 75 171 180 273 3.33e-17 82.8
MsaG000247 MtrunA17_Chr5g0416341 36.634 101 63 1 78 178 29 128 8.86e-17 82.4
MsaG000247 MtrunA17_Chr8g0362231 34.615 104 67 1 78 181 25 127 1.82e-15 78.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG000247 AT4G26930.1 71.318 129 37 0 61 189 7 135 1.25e-60 203
MsaG000247 AT3G11440.2 42.020 307 137 9 68 339 36 336 6.24e-60 203
MsaG000247 AT3G11440.3 42.020 307 137 9 68 339 36 336 5.70e-59 203
MsaG000247 AT3G11440.4 42.020 307 137 9 68 339 36 336 5.70e-59 203
MsaG000247 AT3G11440.1 42.020 307 137 9 68 339 36 336 5.70e-59 203
MsaG000247 AT5G06100.1 40.729 329 161 10 39 339 1 323 5.74e-59 200
MsaG000247 AT5G06100.5 40.729 329 161 10 39 339 1 323 4.01e-58 200
MsaG000247 AT5G06100.2 40.729 329 161 10 39 339 1 323 4.01e-58 200
MsaG000247 AT5G06100.3 40.729 329 161 10 39 339 1 323 4.01e-58 200
MsaG000247 AT5G06100.4 40.729 329 161 10 39 339 1 323 4.01e-58 200
MsaG000247 AT2G32460.1 65.672 134 45 1 61 193 5 138 4.53e-58 199
MsaG000247 AT2G32460.2 68.033 122 39 0 72 193 5 126 1.11e-56 195
MsaG000247 AT5G55020.1 71.074 121 33 1 70 188 21 141 1.70e-55 193
MsaG000247 AT2G26960.1 53.125 160 69 1 73 226 20 179 2.31e-53 185
MsaG000247 AT3G61250.1 63.810 105 38 0 72 176 11 115 1.24e-44 158
MsaG000247 AT4G21440.1 61.682 107 41 0 70 176 9 115 2.28e-43 156
MsaG000247 AT5G16770.4 60.748 107 42 0 70 176 9 115 9.64e-43 154
MsaG000247 AT5G16770.3 60.748 107 42 0 70 176 9 115 9.64e-43 154
MsaG000247 AT5G10280.1 60.748 107 42 0 70 176 9 115 1.02e-42 154
MsaG000247 AT5G16770.1 60.748 107 42 0 70 176 9 115 1.80e-42 153
MsaG000247 AT5G16770.2 60.748 107 42 0 70 176 9 115 1.80e-42 153
MsaG000247 AT3G02940.2 59.813 107 43 0 70 176 9 115 3.86e-42 152
MsaG000247 AT3G01530.1 49.645 141 64 2 70 207 22 158 4.19e-42 149
MsaG000247 AT2G31180.1 58.182 110 46 0 72 181 11 120 6.97e-42 149
MsaG000247 AT3G02940.1 59.813 107 43 0 70 176 9 115 8.10e-42 151
MsaG000247 AT3G02940.3 59.813 107 43 0 70 176 9 115 8.10e-42 151
MsaG000247 AT5G40350.1 61.165 103 40 0 73 175 17 119 1.08e-41 147
MsaG000247 AT3G27810.1 59.813 107 43 0 69 175 16 122 1.10e-41 148
MsaG000247 AT4G05100.1 59.813 107 43 0 70 176 10 116 4.31e-41 149
MsaG000247 AT1G68320.1 57.547 106 45 0 73 178 19 124 7.11e-41 148
MsaG000247 AT4G28110.1 58.879 107 44 0 70 176 9 115 7.66e-41 147
MsaG000247 AT3G24310.1 60.000 110 44 0 70 179 15 124 9.89e-41 147
MsaG000247 AT1G09540.1 60.577 104 41 0 73 176 12 115 1.83e-40 149
MsaG000247 AT1G79180.1 56.780 118 46 1 73 185 14 131 2.20e-40 147
MsaG000247 AT5G65230.1 57.009 107 46 0 70 176 9 115 2.96e-40 147
MsaG000247 AT3G13540.1 58.095 105 44 0 72 176 22 126 4.51e-40 144
MsaG000247 AT3G30210.1 57.798 109 46 0 72 180 26 134 5.49e-40 145
MsaG000247 AT3G23250.1 47.887 142 74 0 72 213 11 152 6.35e-40 145
MsaG000247 AT4G13480.1 60.952 105 41 0 74 178 7 111 7.23e-40 144
MsaG000247 AT4G01680.3 61.321 106 41 0 73 178 12 117 1.93e-39 142
MsaG000247 AT5G60890.1 58.879 107 44 0 70 176 9 115 2.04e-39 144
MsaG000247 AT1G06180.1 59.048 105 43 0 72 176 11 115 2.45e-39 142
MsaG000247 AT5G54230.1 58.654 104 43 0 73 176 12 115 2.68e-39 144
MsaG000247 AT1G34670.1 57.009 107 46 0 70 176 9 115 3.99e-39 145
MsaG000247 AT4G01680.1 61.321 106 41 0 73 178 12 117 4.15e-39 144
MsaG000247 AT1G57560.1 59.615 104 42 0 73 176 12 115 4.24e-39 144
MsaG000247 AT1G57560.2 59.615 104 42 0 73 176 12 115 5.20e-39 142
MsaG000247 AT3G13890.2 58.654 104 43 0 73 176 12 115 5.34e-39 145
MsaG000247 AT5G26660.1 59.434 106 43 0 73 178 12 117 5.37e-39 144
MsaG000247 AT1G18570.1 59.813 107 43 0 70 176 10 116 7.37e-39 144
MsaG000247 AT1G08810.1 60.000 105 42 0 72 176 11 115 8.64e-39 142
MsaG000247 AT3G01140.2 57.009 107 46 0 70 176 9 115 1.41e-38 143
MsaG000247 AT3G01140.1 57.009 107 46 0 70 176 52 158 2.53e-38 144
MsaG000247 AT5G15310.1 57.143 105 45 0 72 176 11 115 3.04e-38 142
MsaG000247 AT5G15310.2 57.143 105 45 0 72 176 11 115 3.91e-38 141
MsaG000247 AT5G15310.4 57.143 105 45 0 72 176 11 115 5.35e-38 139
MsaG000247 AT1G22640.1 57.692 104 44 0 73 176 12 115 5.98e-38 139
MsaG000247 AT3G12720.1 56.481 108 47 0 69 176 18 125 6.13e-38 140
MsaG000247 AT1G66230.1 56.075 107 47 0 72 178 11 117 8.76e-38 139
MsaG000247 AT1G56160.1 56.731 104 45 0 73 176 14 117 9.71e-38 139
MsaG000247 AT1G16490.1 50.400 125 62 0 73 197 14 138 9.79e-38 139
MsaG000247 AT4G38620.1 59.804 102 41 0 75 176 14 115 9.92e-38 139
MsaG000247 AT5G12870.1 58.654 104 43 0 73 176 18 121 9.94e-38 139
MsaG000247 AT1G25340.1 52.679 112 51 1 67 178 14 123 1.07e-37 139
MsaG000247 AT4G17785.2 57.143 105 45 0 72 176 12 116 1.51e-37 140
MsaG000247 AT4G17785.1 57.143 105 45 0 72 176 12 116 1.65e-37 140
MsaG000247 AT5G07700.1 56.190 105 46 0 72 176 11 115 1.89e-37 140
MsaG000247 AT5G07700.2 56.190 105 46 0 72 176 11 115 1.89e-37 140
MsaG000247 AT2G47460.1 49.231 130 64 1 72 199 11 140 2.54e-37 140
MsaG000247 AT3G28910.1 56.075 107 47 0 70 176 9 115 2.78e-37 139
MsaG000247 AT5G61420.2 56.190 105 46 0 72 176 11 115 2.91e-37 140
MsaG000247 AT2G16720.1 57.692 104 44 0 73 176 12 115 2.97e-37 137
MsaG000247 AT2G47190.1 47.727 132 61 1 47 178 2 125 3.79e-37 137
MsaG000247 AT3G47600.1 57.143 105 45 0 72 176 11 115 4.43e-37 139
MsaG000247 AT5G62470.2 57.143 105 45 0 72 176 11 115 4.69e-37 139
MsaG000247 AT5G14750.1 50.000 114 57 0 63 176 6 119 4.94e-37 135
MsaG000247 AT5G07690.1 56.731 104 45 0 72 175 11 114 5.45e-37 139
MsaG000247 AT3G08500.1 53.571 112 52 0 65 176 22 133 6.66e-37 139
MsaG000247 AT1G48000.1 53.774 106 49 0 73 178 32 137 8.80e-37 135
MsaG000247 AT1G74650.1 57.692 104 44 0 73 176 12 115 1.07e-36 138
MsaG000247 AT4G09460.1 57.843 102 43 0 75 176 14 115 1.25e-36 135
MsaG000247 AT1G35515.1 55.769 104 46 0 73 176 12 115 1.38e-36 134
MsaG000247 AT5G16600.1 55.140 107 48 0 72 178 11 117 1.41e-36 137
MsaG000247 AT4G22680.1 55.238 105 47 0 72 176 11 115 1.47e-36 135
MsaG000247 AT5G49330.1 57.143 105 45 0 72 176 11 115 1.61e-36 137
MsaG000247 AT3G46130.1 51.282 117 56 1 70 185 6 122 1.75e-36 135
MsaG000247 AT1G74080.1 58.654 104 43 0 72 175 11 114 2.11e-36 137
MsaG000247 AT5G40330.1 36.842 209 111 5 67 274 6 194 2.82e-36 133
MsaG000247 AT3G60460.1 52.212 113 53 1 67 178 5 117 3.62e-36 135
MsaG000247 AT3G13890.1 53.982 113 43 1 73 176 12 124 4.28e-36 137
MsaG000247 AT5G59780.3 54.286 105 48 0 74 178 9 113 5.26e-36 133
MsaG000247 AT4G01680.2 55.085 118 41 1 73 178 12 129 6.25e-36 136
MsaG000247 AT1G63910.1 55.660 106 47 0 73 178 12 117 6.46e-36 137
MsaG000247 AT4G34990.1 56.863 102 44 0 75 176 14 115 9.76e-36 134
MsaG000247 AT3G62610.1 55.238 105 47 0 72 176 11 115 1.27e-35 135
MsaG000247 AT5G62470.1 57.143 105 44 1 72 176 11 114 1.27e-35 135
MsaG000247 AT4G12350.1 54.808 104 47 0 73 176 12 115 4.43e-35 132
MsaG000247 AT1G74430.1 54.286 105 48 0 72 176 11 115 5.22e-35 131
MsaG000247 AT1G18710.1 48.855 131 65 2 72 200 11 141 5.58e-35 131
MsaG000247 AT3G06490.1 56.881 109 47 0 70 178 16 124 6.17e-35 133
MsaG000247 AT5G52600.1 45.902 122 66 0 67 188 6 127 6.29e-35 129
MsaG000247 AT3G27920.1 53.398 103 48 0 74 176 15 117 7.40e-35 130
MsaG000247 AT2G26950.1 48.760 121 62 0 73 193 16 136 8.15e-35 134
MsaG000247 AT5G14340.1 55.140 107 48 0 72 178 23 129 8.31e-35 131
MsaG000247 AT3G12820.1 57.692 104 44 0 73 176 14 117 8.71e-35 130
MsaG000247 AT4G37780.1 52.830 106 49 1 72 176 11 116 1.56e-34 131
MsaG000247 AT1G79180.2 44.371 151 46 2 73 185 14 164 6.18e-34 130
MsaG000247 AT5G35550.1 52.885 104 49 0 73 176 14 117 1.49e-33 127
MsaG000247 AT5G62320.1 51.754 114 48 1 70 176 10 123 1.80e-33 127
MsaG000247 AT5G49620.1 54.128 109 50 0 70 178 23 131 1.86e-33 128
MsaG000247 AT1G25340.2 50.000 112 49 2 67 178 14 118 2.52e-33 127
MsaG000247 AT3G48920.1 53.922 102 47 0 74 175 19 120 3.44e-33 126
MsaG000247 AT1G25340.3 50.000 112 49 2 67 178 14 118 4.50e-33 127
MsaG000247 AT5G57620.1 50.926 108 52 1 70 176 9 116 1.69e-32 126
MsaG000247 AT5G56110.1 50.962 104 51 0 73 176 12 115 4.14e-32 125
MsaG000247 AT3G28470.1 51.961 102 49 0 70 171 9 110 6.13e-32 124
MsaG000247 AT3G53200.1 52.336 107 51 0 73 179 9 115 6.64e-32 122
MsaG000247 AT3G49690.1 50.000 108 53 1 70 176 9 116 2.71e-31 122
MsaG000247 AT5G23000.1 51.429 105 50 1 73 176 12 116 3.84e-31 122
MsaG000247 AT1G66370.1 49.524 105 53 0 72 176 7 111 4.82e-31 120
MsaG000247 AT4G25560.1 51.456 103 50 0 74 176 11 113 1.05e-30 120
MsaG000247 AT5G65790.1 49.074 108 54 1 70 176 9 116 5.40e-30 120
MsaG000247 AT5G49620.2 47.967 123 50 1 70 178 23 145 5.52e-30 119
MsaG000247 AT5G52260.1 44.882 127 70 0 63 189 2 128 2.11e-29 116
MsaG000247 AT5G26660.2 67.123 73 24 0 106 178 14 86 2.64e-29 117
MsaG000247 AT1G56650.1 48.182 110 57 0 67 176 2 111 6.30e-29 114
MsaG000247 AT2G36890.1 47.788 113 58 1 70 181 9 121 6.99e-29 115
MsaG000247 AT3G27810.2 68.571 70 22 0 106 175 4 73 7.10e-29 112
MsaG000247 AT2G36890.2 47.788 113 58 1 70 181 50 162 1.03e-28 116
MsaG000247 AT5G40350.2 67.143 70 23 0 106 175 5 74 1.74e-28 110
MsaG000247 AT1G66380.1 47.273 110 58 0 67 176 2 111 9.96e-28 107
MsaG000247 AT1G66390.1 47.273 110 58 0 67 176 2 111 1.46e-27 110
MsaG000247 AT4G18770.1 44.628 121 61 2 67 182 209 328 3.04e-27 113
MsaG000247 AT3G09370.2 51.923 104 49 1 73 176 133 235 8.86e-27 113
MsaG000247 AT3G09370.1 51.923 104 49 1 73 176 128 230 9.95e-27 113
MsaG000247 AT3G09370.3 51.923 104 49 1 73 176 141 243 1.24e-26 112
MsaG000247 AT5G02320.1 49.565 115 52 2 73 182 125 238 1.58e-26 112
MsaG000247 AT5G02320.2 49.565 115 52 2 73 182 125 238 1.58e-26 112
MsaG000247 AT5G02320.3 49.565 115 52 2 73 182 65 178 1.74e-26 112
MsaG000247 AT3G46130.3 54.118 85 38 1 102 185 6 90 3.64e-26 106
MsaG000247 AT5G58850.1 48.571 105 51 2 73 176 103 205 5.33e-26 110
MsaG000247 AT3G50060.1 44.954 109 59 1 75 183 6 113 1.26e-25 106
MsaG000247 AT3G46130.4 52.174 92 41 2 95 185 11 100 1.44e-25 105
MsaG000247 AT5G59780.2 54.762 84 36 1 95 178 11 92 1.53e-25 104
MsaG000247 AT5G40360.1 37.423 163 86 3 73 220 156 317 3.73e-25 106
MsaG000247 AT3G12820.2 66.176 68 23 0 109 176 2 69 5.96e-25 102
MsaG000247 AT2G23290.1 50.000 102 50 1 75 176 13 113 6.27e-25 105
MsaG000247 AT3G55730.1 49.515 103 49 2 75 176 56 156 8.30e-25 106
MsaG000247 AT5G11050.1 47.573 103 51 2 75 176 105 205 8.43e-25 106
MsaG000247 AT5G11510.3 47.115 104 54 1 73 176 79 181 8.53e-25 108
MsaG000247 AT5G11510.3 36.458 96 59 2 75 169 29 123 6.97e-11 65.1
MsaG000247 AT5G11510.1 47.115 104 54 1 73 176 79 181 8.53e-25 108
MsaG000247 AT5G11510.1 36.458 96 59 2 75 169 29 123 6.97e-11 65.1
MsaG000247 AT5G11510.4 47.115 104 54 1 73 176 79 181 8.53e-25 108
MsaG000247 AT5G11510.4 36.458 96 59 2 75 169 29 123 6.97e-11 65.1
MsaG000247 AT4G37260.1 49.020 102 51 1 75 176 13 113 9.65e-25 104
MsaG000247 AT1G69560.2 40.559 143 78 3 41 178 85 225 1.06e-24 105
MsaG000247 AT5G11510.2 47.115 104 54 1 73 176 79 181 1.18e-24 107
MsaG000247 AT5G11510.2 36.458 96 59 2 75 169 29 123 8.21e-11 64.7
MsaG000247 AT5G11510.5 47.115 104 54 1 73 176 79 181 1.35e-24 107
MsaG000247 AT5G11510.5 36.458 96 59 2 75 169 29 123 9.07e-11 64.7
MsaG000247 AT1G69560.1 40.559 143 78 3 41 178 69 209 1.37e-24 104
MsaG000247 AT5G35550.2 60.563 71 28 0 106 176 50 120 1.37e-24 102
MsaG000247 AT3G09230.1 48.039 102 52 1 75 176 55 155 1.62e-24 105
MsaG000247 AT1G17950.1 43.103 116 63 2 75 189 5 118 3.62e-24 101
MsaG000247 AT4G32730.5 47.115 104 54 1 73 176 85 187 4.58e-24 106
MsaG000247 AT4G32730.4 47.115 104 54 1 73 176 85 187 4.58e-24 106
MsaG000247 AT4G32730.3 47.115 104 54 1 73 176 85 187 4.58e-24 106
MsaG000247 AT4G32730.2 47.115 104 54 1 73 176 85 187 4.58e-24 106
MsaG000247 AT4G32730.1 47.115 104 54 1 73 176 85 187 4.69e-24 106
MsaG000247 AT5G67300.1 48.039 102 52 1 75 176 6 106 1.83e-23 100
MsaG000247 AT2G39880.1 41.600 125 70 2 53 176 28 150 2.28e-23 101
MsaG000247 AT4G33450.1 43.519 108 60 1 74 181 18 124 3.62e-23 98.6
MsaG000247 AT3G53200.2 58.108 74 31 0 106 179 9 82 3.83e-23 97.4
MsaG000247 AT3G27785.1 43.925 107 59 1 70 176 184 289 3.91e-23 101
MsaG000247 AT1G26780.1 46.018 113 58 2 73 184 96 206 4.51e-23 99.0
MsaG000247 AT1G26780.2 46.018 113 58 2 73 184 96 206 6.30e-23 100
MsaG000247 AT5G14750.3 50.633 79 34 1 103 176 7 85 9.04e-23 95.1
MsaG000247 AT3G29020.1 40.870 115 67 1 75 189 65 178 3.84e-22 95.1
MsaG000247 AT3G47600.2 56.338 71 31 0 106 176 39 109 3.93e-22 97.4
MsaG000247 AT3G29020.2 40.870 115 67 1 75 189 67 180 4.01e-22 97.1
MsaG000247 AT5G17800.1 41.353 133 66 3 75 196 93 224 4.94e-22 97.1
MsaG000247 AT4G00540.2 38.824 170 82 5 73 226 101 264 2.01e-21 96.3
MsaG000247 AT4G00540.1 38.824 170 82 5 73 226 99 262 3.01e-21 96.3
MsaG000247 AT1G73410.1 46.667 105 53 2 75 178 6 108 3.29e-21 92.8
MsaG000247 AT1G73410.2 46.667 105 53 2 75 178 6 108 1.03e-20 90.5
MsaG000247 AT2G25230.1 42.735 117 58 5 73 183 24 137 6.10e-19 86.3
MsaG000247 AT1G66380.2 45.238 84 46 0 67 150 2 85 7.23e-18 79.7
MsaG000247 AT2G37630.1 36.765 136 80 2 78 207 7 142 8.68e-18 85.1
MsaG000247 AT3G23250.2 42.553 94 54 0 120 213 2 95 1.14e-17 82.4
MsaG000247 AT1G66380.3 47.887 71 37 0 106 176 8 78 1.37e-17 78.6
MsaG000247 AT1G22640.3 59.649 57 23 0 120 176 2 58 3.93e-17 80.1
MsaG000247 AT1G18960.1 40.952 105 53 3 75 176 10 108 5.36e-17 82.0
MsaG000247 AT2G02820.3 31.200 125 83 2 78 202 33 154 2.42e-16 80.5
MsaG000247 AT2G02820.2 31.200 125 83 2 78 202 33 154 2.47e-16 81.6
MsaG000247 AT2G02820.1 31.200 125 83 2 78 202 33 154 2.56e-16 81.3
MsaG000247 AT1G14350.2 34.653 101 65 1 78 178 28 127 4.48e-16 80.5
MsaG000247 AT1G14350.1 34.653 101 65 1 78 178 28 127 4.48e-16 80.5
MsaG000247 AT5G40430.1 37.864 103 62 2 73 175 52 152 6.64e-15 75.1
MsaG000247 AT5G14750.4 47.368 57 30 0 120 176 2 58 5.55e-14 69.7
MsaG000247 AT5G14750.2 47.368 57 30 0 120 176 2 58 5.55e-14 69.7
MsaG000247 AT5G39700.1 38.542 96 58 1 76 171 57 151 1.10e-13 70.1
MsaG000247 AT3G46130.2 51.786 56 26 1 131 185 1 56 2.50e-13 68.9
MsaG000247 AT5G59780.1 56.250 48 21 0 131 178 1 48 2.95e-13 68.2
MsaG000247 AT1G71030.2 41.538 65 38 0 112 176 5 69 2.32e-12 65.9
MsaG000247 AT1G71030.1 41.538 65 38 0 112 176 19 83 2.99e-12 65.9
MsaG000247 AT4G25560.2 56.522 46 20 0 131 176 2 47 3.36e-12 66.2
MsaG000247 AT1G14350.3 40.323 62 37 0 117 178 23 84 4.87e-11 64.7
MsaG000247 AT1G14350.4 40.323 62 37 0 117 178 23 84 4.87e-11 64.7

Find 108 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAAGATGGGAAATAAA+TGG 0.239007 1:-3302513 MsaT000247.1:CDS
AGTCTTCATGAACCCATATA+TGG 0.244427 1:+3300931 None:intergenic
TGACTCCTCTCTAGAGAAAT+TGG 0.245559 1:+3300824 None:intergenic
AAACATGGTGGTAAAATATC+TGG 0.257423 1:+3301214 None:intergenic
TGAAACGGATTGTAGCTATT+TGG 0.258205 1:+3301013 None:intergenic
ATGATTCGACGTTCTTCTTC+AGG 0.268447 1:+3302544 None:intergenic
CTCTCAGAAGAAAAGTAATC+TGG 0.306960 1:+3300367 None:intergenic
ATAATGAGATAAAGAACTTT+TGG 0.307361 1:-3301411 MsaT000247.1:CDS
CATTCAGATGATAAATCTTC+AGG 0.312305 1:+3301343 None:intergenic
TATGCTAAGATTTGCTTCAT+TGG 0.318903 1:+3300790 None:intergenic
ACAGGCTCAACTGGAGGATA+TGG 0.338931 1:+3300857 None:intergenic
ATTGACTGAACAGGCTCAAC+TGG 0.349423 1:+3300848 None:intergenic
GATGATGGCGATCACAAAAT+AGG 0.362163 1:-3302862 MsaT000247.1:CDS
CTTCTGAGAGAGATGATTTG+AGG 0.371667 1:-3300354 MsaT000247.1:CDS
CTCTGCTTCATCATGCTGGC+TGG 0.372309 1:+3301279 None:intergenic
TCAAATACTGCTGGGGCAGC+AGG 0.376035 1:+3301097 None:intergenic
TAATCTTTAAATATCACTTC+AGG 0.379136 1:+3301247 None:intergenic
GGGAAATAAATGGGCTCAAA+TGG 0.387881 1:-3302503 MsaT000247.1:CDS
GAAATTGGAATTGACTGAAC+AGG 0.400738 1:+3300839 None:intergenic
CGTCTCCTTCGTCTTCTCCA+TGG 0.402216 1:-3301048 MsaT000247.1:CDS
TGTTCTCTGCTTCATCATGC+TGG 0.404526 1:+3301275 None:intergenic
GAACACAAGATGCAAGAAAC+GGG 0.408906 1:-3301389 MsaT000247.1:CDS
GAGCAAGTCCGGTACACTTC+CGG 0.430508 1:+3302638 None:intergenic
GATAAATCTTCAGGGTAGAT+TGG 0.431079 1:+3301352 None:intergenic
GTCTCCTTCGTCTTCTCCAT+GGG 0.431298 1:-3301047 MsaT000247.1:CDS
TCAATCACAGGCGCAGCATC+TGG 0.436455 1:+3300313 None:intergenic
GACTTCCAAGGGCGCTTTGA+GGG 0.437235 1:+3301160 None:intergenic
TCATGAATATGATAGCACTA+TGG 0.438389 1:-3300993 MsaT000247.1:CDS
AGCGCTTCAAGCGAAGATTA+TGG 0.439343 1:-3302934 MsaT000247.1:CDS
TCATCCTCTGCCGTTGTCCA+TGG 0.443860 1:+3302712 None:intergenic
CTAAGATTTGCTTCATTGGA+TGG 0.444315 1:+3300794 None:intergenic
AACTGATGATCAAATACTGC+TGG 0.456239 1:+3301088 None:intergenic
TCATAAGATGGGAAATAAAT+GGG 0.457676 1:-3302512 MsaT000247.1:CDS
ATTGCACCCTTTCTGAGATC+AGG 0.458941 1:+3302571 None:intergenic
CATTGAGTTGCATCATAAGA+TGG 0.466206 1:-3302524 MsaT000247.1:CDS
TTTCCCACAGCGAGCAAGTC+CGG 0.466320 1:+3302627 None:intergenic
GGAGATACCACTGGAGGAGA+AGG 0.467461 1:-3302760 MsaT000247.1:CDS
TGCGTCCCTCAAAGCGCCCT+TGG 0.468573 1:-3301165 MsaT000247.1:CDS
AACGGCAGAGGATGAAATCT+TGG 0.471469 1:-3302704 MsaT000247.1:CDS
GTCTTCATGAACCCATATAT+GGG 0.491841 1:+3300932 None:intergenic
GGAACACAAGATGCAAGAAA+CGG 0.492766 1:-3301390 MsaT000247.1:CDS
ATCTCATTATCTGTGCGTCC+AGG 0.493581 1:+3301424 None:intergenic
GTGCTATCATATTCATGAAA+CGG 0.494601 1:+3300998 None:intergenic
ATTATTATTATTATAGTCAA+AGG 0.494788 1:+3300724 None:intergenic
AGCAAATCTTAGCATACAAT+GGG 0.495128 1:-3300783 MsaT000247.1:CDS
ATGGGCTCAAATGGCAGCAC+TGG 0.500562 1:-3302494 MsaT000247.1:intron
AGGGAAATTGGAACTCTGTC+CGG 0.506939 1:-3302657 MsaT000247.1:CDS
ATAACTGTACAAATTCATAT+CGG 0.515660 1:+3301138 None:intergenic
GGACTTCCAAGGGCGCTTTG+AGG 0.516823 1:+3301159 None:intergenic
AACTCTGTCCGGAAGTGTAC+CGG 0.521040 1:-3302646 MsaT000247.1:CDS
AAGCAAATCTTAGCATACAA+TGG 0.524884 1:-3300784 MsaT000247.1:CDS
CAAATACTGCTGGGGCAGCA+GGG 0.528905 1:+3301098 None:intergenic
GTGGCGATGATGATCGCAAA+AGG 0.530729 1:-3302810 MsaT000247.1:CDS
TCTCAGAAGAAAAGTAATCT+GGG 0.531207 1:+3300368 None:intergenic
CCACTCAGCTGAAACTACTC+AGG 0.545536 1:-3300672 MsaT000247.1:CDS
ATTCAGATGATAAATCTTCA+GGG 0.545938 1:+3301344 None:intergenic
CTGTGATTGATGACTTCGCT+TGG 0.546041 1:-3300300 MsaT000247.1:CDS
TGTTTCGATAAGCTTCTAGC+TGG 0.546372 1:-3301196 MsaT000247.1:CDS
GGAGAAGGTGGTCTAAAGAA+AGG 0.546935 1:-3302736 MsaT000247.1:CDS
AACATGGTGGTAAAATATCT+GGG 0.549896 1:+3301215 None:intergenic
ATGAACATGTGCTCAACTGA+TGG 0.550221 1:-3300698 MsaT000247.1:CDS
ATTGAGTTGCATCATAAGAT+GGG 0.552114 1:-3302523 MsaT000247.1:CDS
TTCTCCTCCTTCTCCTCCAG+TGG 0.555594 1:+3302753 None:intergenic
CTGAGACCTGATCTCAGAAA+GGG 0.555668 1:-3302577 MsaT000247.1:CDS
CAATTCCAATTTCTCTAGAG+AGG 0.556295 1:-3300829 MsaT000247.1:CDS
GATGTTGAGTCTGTGAGTAT+TGG 0.557135 1:+3300894 None:intergenic
GTCTGTGAGTATTGGAGTGA+AGG 0.558104 1:+3300902 None:intergenic
GGAAAAGCTGTCGTCTACGA+TGG 0.558748 1:-3302609 MsaT000247.1:CDS
TCTGAGACCTGATCTCAGAA+AGG 0.562729 1:-3302578 MsaT000247.1:CDS
GAGTCAGATGATCAGTATGA+TGG 0.563883 1:-3300758 MsaT000247.1:CDS
AGCGCTTCAAGCGAAGATGA+TGG 0.565732 1:-3302877 MsaT000247.1:CDS
AGGTCCATGGACAACGGCAG+AGG 0.565835 1:-3302716 MsaT000247.1:CDS
AATTCATATCGGACTTCCAA+GGG 0.570384 1:+3301149 None:intergenic
ACTGGAGGAGAAGGAGGAGA+AGG 0.570737 1:-3302751 MsaT000247.1:CDS
GCTGATCAAGAAACTGATGA+AGG 0.572989 1:-3302781 MsaT000247.1:CDS
GGAGGAGAAGGAGGAGAAGG+TGG 0.573619 1:-3302748 MsaT000247.1:CDS
TCTGTGAGTATTGGAGTGAA+GGG 0.573821 1:+3300903 None:intergenic
TTTGGTTCAATATCCTCCCA+TGG 0.576367 1:+3301031 None:intergenic
AAATACTGCTGGGGCAGCAG+GGG 0.586533 1:+3301099 None:intergenic
GATACCACTGGAGGAGAAGG+AGG 0.586651 1:-3302757 MsaT000247.1:CDS
AAATTCATATCGGACTTCCA+AGG 0.593050 1:+3301148 None:intergenic
GAAAAGCTGTCGTCTACGAT+GGG 0.599406 1:-3302608 MsaT000247.1:CDS
CAAGCGAAGTCATCAATCAC+AGG 0.599584 1:+3300301 None:intergenic
GTACCGGACTTGCTCGCTGT+GGG 0.602772 1:-3302630 MsaT000247.1:CDS
ACTGATGATCAAATACTGCT+GGG 0.604111 1:+3301089 None:intergenic
GTGGTCTAAAGAAAGGTCCA+TGG 0.604974 1:-3302729 MsaT000247.1:CDS
ACTGATGAAGGAGATACCAC+TGG 0.608872 1:-3302769 MsaT000247.1:CDS
GAAGACGAAGGAGACGACAT+AGG 0.610440 1:+3301055 None:intergenic
TGTACCGGACTTGCTCGCTG+TGG 0.619659 1:-3302631 MsaT000247.1:CDS
TCCTTCGTCTTCTCCATGGG+AGG 0.622941 1:-3301044 MsaT000247.1:CDS
TTATTATTATAGTCAAAGGA+CGG 0.623516 1:+3300728 None:intergenic
ATATATGGGCTCAAAAGAAG+AGG 0.624061 1:+3300946 None:intergenic
CTGTGAGTATTGGAGTGAAG+GGG 0.624149 1:+3300904 None:intergenic
TGAACATGTGCTCAACTGAT+GGG 0.624333 1:-3300697 MsaT000247.1:CDS
GACTGAACAGGCTCAACTGG+AGG 0.625059 1:+3300851 None:intergenic
TGTGAGTATTGGAGTGAAGG+GGG 0.628192 1:+3300905 None:intergenic
CCTGAGTAGTTTCAGCTGAG+TGG 0.629309 1:+3300672 None:intergenic
GCTAGAAGCTTATCGAAACA+TGG 0.638126 1:+3301199 None:intergenic
CTGGGATCTGAAATGCAGCA+TGG 0.647582 1:+3300386 None:intergenic
CACTCAGCTGAAACTACTCA+GGG 0.650885 1:-3300671 MsaT000247.1:intron
GTTATGAGTAGCTCTTCAAG+TGG 0.666064 1:-3302829 MsaT000247.1:CDS
AAAGAAAGGTCCATGGACAA+CGG 0.666614 1:-3302722 MsaT000247.1:CDS
CTGATGATCAAATACTGCTG+GGG 0.682047 1:+3301090 None:intergenic
TCCTCCCATGGAGAAGACGA+AGG 0.691634 1:+3301043 None:intergenic
AACACAAGATGCAAGAAACG+GGG 0.712037 1:-3301388 MsaT000247.1:CDS
AGAAGCTTATCGAAACATGG+TGG 0.728055 1:+3301202 None:intergenic
GATGAAGGAGATACCACTGG+AGG 0.760470 1:-3302766 MsaT000247.1:CDS
ATGGTGGTAAAATATCTGGG+CGG 0.781920 1:+3301218 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 3300282 3302962 3300282 ID=MsaG000247
Chr1 mRNA 3300282 3302962 3300282 ID=MsaT000247.1;Parent=MsaG000247
Chr1 exon 3300282 3300421 3300282 ID=MsaT000247.1.exon3;Parent=MsaT000247.1
Chr1 CDS 3300282 3300421 3300282 ID=cds.MsaT000247.1;Parent=MsaT000247.1
Chr1 exon 3300672 3301449 3300672 ID=MsaT000247.1.exon2;Parent=MsaT000247.1
Chr1 CDS 3300672 3301449 3300672 ID=cds.MsaT000247.1;Parent=MsaT000247.1
Chr1 exon 3302495 3302962 3302495 ID=MsaT000247.1.exon1;Parent=MsaT000247.1
Chr1 CDS 3302495 3302962 3302495 ID=cds.MsaT000247.1;Parent=MsaT000247.1
Gene Sequence

>MsaT000247.1

ATGAGCAGCGCTTCAAGCGAAGATTATGGTGACCACAAAACTGACATATTGAGAGTCATGAATAGCGCTTCAAGCGAAGATGATGGCGATCACAAAATAGGCATATTGAGTGTTATGAGTAGCTCTTCAAGTGGCGATGATGATCGCAAAAGGCTATCAGCTGATCAAGAAACTGATGAAGGAGATACCACTGGAGGAGAAGGAGGAGAAGGTGGTCTAAAGAAAGGTCCATGGACAACGGCAGAGGATGAAATCTTGGTAGCTCATGTTCAAAAATACGGTGAGGGAAATTGGAACTCTGTCCGGAAGTGTACCGGACTTGCTCGCTGTGGGAAAAGCTGTCGTCTACGATGGGCAAATCATCTGAGACCTGATCTCAGAAAGGGTGCAATTACTCCTGAAGAAGAACGTCGAATCATTGAGTTGCATCATAAGATGGGAAATAAATGGGCTCAAATGGCAGCACTGTTGCCTGGACGCACAGATAATGAGATAAAGAACTTTTGGAACACAAGATGCAAGAAACGGGGTCGAGCAAACTTGCCAATCTACCCTGAAGATTTATCATCTGAATGTCTGCTGAATCAAGAAAATGCTGACATGTTGACAAATGAAGCCAGCCAGCATGATGAAGCAGAGAACAAAGTACCTGAAGTGATATTTAAAGATTACAAACTCCGCCCAGATATTTTACCACCATGTTTCGATAAGCTTCTAGCTGGCTTGTTATTGCGTCCCTCAAAGCGCCCTTGGAAGTCCGATATGAATTTGTACAGTTATAGCAATAATGCTGCTGCCCCTGCTGCCCCAGCAGTATTTGATCATCAGTTCAGAAAATATCCTATGTCGTCTCCTTCGTCTTCTCCATGGGAGGATATTGAACCAAATAGCTACAATCCGTTTCATGAATATGATAGCACTATGGTTGATATTCACCCCACACCAAAAACCTCTTCTTTTGAGCCCATATATGGGTTCATGAAGACTGAGCCCCCTTCACTCCAATACTCACAGACTCAACATCGTAGCTATATGATTCCATATCCTCCAGTTGAGCCTGTTCAGTCAATTCCAATTTCTCTAGAGAGGAGTCATTTTCTTCCATCCAATGAAGCAAATCTTAGCATACAATGGGATGAGTCAGATGATCAGTATGATGGTTTATTTCCGTCCTTTGACTATAATAATAATAATCATATGAACATGTGCTCAACTGATGGGCACCACTCAGCTGAAACTACTCAGGGTCATGATATTAACCATGCTGCATTTCAGATCCCAGATTACTTTTCTTCTGAGAGAGATGATTTGAGGAGAAAAATATTTGCGCATCCAGATGCTGCGCCTGTGATTGATGACTTCGCTTGGTATTATAAAATAGAATAA
Protein sequence

>MsaT000247.1

MSSASSEDYGDHKTDILRVMNSASSEDDGDHKIGILSVMSSSSSGDDDRKRLSADQETDEGDTTGGEGGEGGLKKGPWTTAEDEILVAHVQKYGEGNWNSVRKCTGLARCGKSCRLRWANHLRPDLRKGAITPEEERRIIELHHKMGNKWAQMAALLPGRTDNEIKNFWNTRCKKRGRANLPIYPEDLSSECLLNQENADMLTNEASQHDEAENKVPEVIFKDYKLRPDILPPCFDKLLAGLLLRPSKRPWKSDMNLYSYSNNAAAPAAPAVFDHQFRKYPMSSPSSSPWEDIEPNSYNPFHEYDSTMVDIHPTPKTSSFEPIYGFMKTEPPSLQYSQTQHRSYMIPYPPVEPVQSIPISLERSHFLPSNEANLSIQWDESDDQYDGLFPSFDYNNNNHMNMCSTDGHHSAETTQGHDINHAAFQIPDYFSSERDDLRRKIFAHPDAAPVIDDFAWYYKIE*