AlfalfaGEDB | MsaG000377

M. sativa ssp. caerulea / MsaG000377

KEGG: K09377
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008150 GO:0009987 GO:0016020 GO:0016043 GO:0022607 GO:0030029 GO:0030036 GO:0044085 GO:0044464 GO:0044877 GO:0051015 GO:0051017 GO:0061572 GO:0071840 GO:0071944 GO:0097159 GO:0097435 GO:1901363
PFAM: PF00412.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000377	XP_003589058.1	98.817	169	2	0	1	169	1	169	1.17e-121	351

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000377	sp\|Q94JX5\|WLIM1_ARATH	85.799	169	24	0	1	169	1	169	2.31e-108	310
MsaG000377	sp\|Q94JX5\|WLIM1_ARATH	44.444	72	40	0	3	74	103	174	7.37e-15	72.0

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification
MsaG000377	TF	LIM

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000005	MsaG000377	0.828430	1.616086e-54	4.473218e-52
MsaG000286	MsaG000377	0.836492	1.658425e-56	5.809530e-54
MsaG000377	MsaG000413	0.808284	5.685690e-50	9.316240e-48
MsaG000377	MsaG000570	0.822251	4.610970e-53	1.076527e-50
MsaG000377	MsaG000545	0.813873	3.542624e-51	6.657000e-49
MsaG000377	MsaG000801	0.808711	4.614747e-50	7.639799e-48
MsaG000377	MsaG000944	0.847281	2.410856e-59	1.191725e-56
MsaG000377	MsaG002061	0.806312	1.481939e-49	2.316901e-47
MsaG000377	MsaG002167	0.815197	1.809596e-51	3.515672e-49
MsaG000377	MsaG002213	0.805087	2.672032e-49	4.059124e-47
MsaG000377	MsaG002290	0.825893	6.500539e-54	1.676148e-51
MsaG000377	MsaG002717	0.847394	2.244759e-59	1.113898e-56
MsaG000377	MsaG002838	0.820080	1.450915e-52	3.197962e-50
MsaG000377	MsaG002975	0.811707	1.050312e-50	1.870044e-48
MsaG000377	MsaG003089	0.813236	4.883556e-51	9.031286e-49
MsaG000377	MsaG003113	0.801814	1.264602e-48	1.781435e-46
MsaG000377	MsaG003435	0.834781	4.473141e-56	1.488597e-53
MsaG000377	MsaG003517	0.800616	2.218059e-48	3.041014e-46
MsaG000377	MsaG003616	0.812908	5.759172e-51	1.056361e-48
MsaG000377	MsaG003738	0.854308	2.588941e-61	1.631838e-58
MsaG000377	MsaG003745	0.800652	2.181289e-48	2.993020e-46
MsaG000377	MsaG003880	0.807398	8.757572e-50	1.404710e-47
MsaG000377	MsaG003930	0.811714	1.046307e-50	1.863250e-48
MsaG000377	MsaG003934	0.830984	3.889695e-55	1.157849e-52
MsaG000377	MsaG003939	0.826513	4.636992e-54	1.216388e-51
MsaG000377	MsaG003976	0.848374	1.208954e-59	6.198834e-57
MsaG000377	MsaG003977	0.818776	2.868161e-52	6.108089e-50
MsaG000377	MsaG004357	0.832905	1.311188e-55	4.127619e-53
MsaG000377	MsaG004420	0.833835	7.707472e-56	2.493360e-53
MsaG000377	MsaG004444	0.831958	2.244314e-55	6.873316e-53
MsaG000377	MsaG004584	0.846929	3.006048e-59	1.468485e-56
MsaG000377	MsaG004756	0.818615	3.118620e-52	6.613726e-50
MsaG000377	MsaG004838	0.807218	9.558273e-50	1.526572e-47
MsaG000377	MsaG004956	0.814148	3.082433e-51	5.832101e-49
MsaG000377	MsaG005163	0.804645	3.301888e-49	4.964651e-47
MsaG000377	MsaG005152	0.839886	2.237204e-57	8.702639e-55
MsaG000377	MsaG005338	0.805152	2.589808e-49	3.940259e-47
MsaG000377	MsaG005574	0.803413	5.937852e-49	8.677036e-47
MsaG000377	MsaG005598	0.825844	6.674517e-54	1.718640e-51
MsaG000377	MsaG005769	0.820457	1.190371e-52	2.650002e-50
MsaG000377	MsaG006491	0.881704	4.086675e-70	7.989262e-67
MsaG000377	MsaG006504	0.814165	3.056644e-51	5.785797e-49
MsaG000377	MsaG006563	0.838450	5.250329e-57	1.952664e-54
MsaG000377	MsaG006686	0.855231	1.401620e-61	9.130586e-59
MsaG000377	MsaG007015	0.805433	2.262793e-49	3.465191e-47
MsaG000377	MsaG007064	0.806327	1.471009e-49	2.300633e-47
MsaG000377	MsaG007212	0.826153	5.641070e-54	1.465103e-51
MsaG000377	MsaG007375	0.813613	4.039256e-51	7.540697e-49
MsaG000377	MsaG007546	0.821292	7.668077e-53	1.745114e-50
MsaG000377	MsaG007610	0.857056	4.118207e-62	2.867103e-59
MsaG000377	MsaG008330	0.822310	4.467316e-53	1.044697e-50
MsaG000377	MsaG008305	0.814481	2.604019e-51	4.968376e-49
MsaG000377	MsaG008458	0.815625	1.455438e-51	2.858362e-49
MsaG000377	MsaG008432	0.843366	2.731919e-58	1.186967e-55
MsaG000377	MsaG008647	0.875006	8.959282e-68	1.288774e-64
MsaG000377	MsaG008834	0.837891	7.304221e-57	2.669855e-54
MsaG000377	MsaG010004	0.808700	4.639988e-50	7.679567e-48
MsaG000377	MsaG010148	0.826550	4.544074e-54	1.193198e-51
MsaG000377	MsaG010298	0.804408	3.696992e-49	5.528504e-47
MsaG000377	MsaG010305	0.803952	4.594920e-49	6.799089e-47
MsaG000377	MsaG011043	0.830727	4.493430e-55	1.327686e-52
MsaG000377	MsaG011199	0.823204	2.773627e-53	6.644378e-51
MsaG000377	MsaG011230	0.822571	3.889495e-53	9.159332e-51
MsaG000377	MsaG011407	0.830581	4.877429e-55	1.435103e-52
MsaG000377	MsaG011389	0.842924	3.578463e-58	1.532818e-55
MsaG000377	MsaG011805	0.810312	2.098651e-50	3.611326e-48
MsaG000377	MsaG012430	0.814949	2.053485e-51	3.964412e-49
MsaG000377	MsaG013231	0.823020	3.060282e-53	7.294733e-51
MsaG000377	MsaG013827	0.803209	6.542686e-49	9.515950e-47
MsaG000377	MsaG014560	0.806761	1.192697e-49	1.884538e-47
MsaG000377	MsaG014844	0.820488	1.171332e-52	2.609687e-50
MsaG000377	MsaG015012	0.804604	3.367067e-49	5.057835e-47
MsaG000377	MsaG015690	0.817090	6.866334e-52	1.399990e-49
MsaG000377	MsaG015898	0.813171	5.046249e-51	9.316873e-49
MsaG000377	MsaG017152	0.802427	9.471846e-49	1.353103e-46
MsaG000377	MsaG017261	0.811304	1.283322e-50	2.262514e-48
MsaG000377	MsaG017323	0.830501	5.100768e-55	1.497411e-52
MsaG000377	MsaG017372	0.813558	4.151302e-51	7.739476e-49
MsaG000377	MsaG017405	0.800976	1.873839e-48	2.589943e-46
MsaG000377	MsaG017469	0.832118	2.049753e-55	6.306960e-53
MsaG000377	MsaG017710	0.807423	8.651758e-50	1.388587e-47
MsaG000377	MsaG017825	0.819472	1.994892e-52	4.326738e-50
MsaG000377	MsaG017905	0.824865	1.135494e-53	2.845769e-51
MsaG000377	MsaG017957	0.804460	3.607565e-49	5.401027e-47
MsaG000377	MsaG017958	0.852100	1.103183e-60	6.431286e-58
MsaG000377	MsaG018062	0.823155	2.846587e-53	6.810033e-51
MsaG000377	MsaG018260	0.833846	7.656853e-56	2.477823e-53
MsaG000377	MsaG018384	0.841685	7.593129e-58	3.125979e-55
MsaG000377	MsaG018426	0.804452	3.620798e-49	5.419927e-47
MsaG000377	MsaG018501	0.821639	6.379866e-53	1.465417e-50
MsaG000377	MsaG018538	0.868941	9.095418e-66	1.008383e-62
MsaG000377	MsaG018592	0.842216	5.503581e-58	2.304359e-55
MsaG000377	MsaG018682	0.816946	7.393031e-52	1.501798e-49
MsaG000377	MsaG018792	0.898350	1.320261e-76	6.135473e-73
MsaG000377	MsaG018860	0.844592	1.286166e-58	5.814862e-56
MsaG000377	MsaG019059	0.838235	5.964534e-57	2.203401e-54
MsaG000377	MsaG019268	0.813678	3.908687e-51	7.308894e-49
MsaG000377	MsaG019616	0.863358	5.233942e-64	4.632870e-61
MsaG000377	MsaG019740	0.855121	1.508477e-61	9.787516e-59
MsaG000377	MsaG019937	0.825004	1.053121e-53	2.649396e-51
MsaG000377	MsaG019939	0.800129	2.783653e-48	3.774539e-46
MsaG000377	MsaG020015	0.840452	1.595245e-57	6.316306e-55
MsaG000377	MsaG020133	0.837718	8.088226e-57	2.940726e-54
MsaG000377	MsaG020335	0.815190	1.816141e-51	3.527709e-49
MsaG000377	MsaG020337	0.819752	1.723316e-52	3.765135e-50
MsaG000377	MsaG020529	0.803887	4.739767e-49	7.002614e-47
MsaG000377	MsaG020552	0.817879	4.567898e-52	9.504575e-50
MsaG000377	MsaG020607	0.838758	4.375796e-57	1.643161e-54
MsaG000377	MsaG020593	0.872707	5.309139e-67	6.905526e-64
MsaG000377	MsaG020599	0.827987	2.064407e-54	5.643318e-52
MsaG000377	MsaG020679	0.810307	2.104675e-50	3.621149e-48
MsaG000377	MsaG020894	0.819258	2.231511e-52	4.812881e-50
MsaG000377	MsaG021128	0.809894	2.580602e-50	4.395667e-48
MsaG000377	MsaG021153	0.812029	8.940561e-51	1.604520e-48
MsaG000377	MsaG021274	0.860806	3.146370e-63	2.522833e-60
MsaG000377	MsaG021317	0.827744	2.359869e-54	6.407235e-52
MsaG000377	MsaG021422	0.860224	4.714379e-63	3.697261e-60
MsaG000377	MsaG021816	0.821863	5.667203e-53	1.309442e-50
MsaG000377	MsaG022192	0.845516	7.261405e-59	3.384213e-56
MsaG000377	MsaG022321	0.824421	1.442404e-53	3.571507e-51
MsaG000377	MsaG022461	0.807087	1.018218e-49	1.621226e-47
MsaG000377	MsaG023035	0.863282	5.526506e-64	4.876948e-61
MsaG000377	MsaG023272	0.821868	5.651862e-53	1.306069e-50
MsaG000377	MsaG023582	0.811497	1.165866e-50	2.065169e-48
MsaG000377	MsaG023972	0.857511	3.024852e-62	2.141873e-59
MsaG000377	MsaG024144	0.853904	3.380786e-61	2.100275e-58
MsaG000377	MsaG024335	0.801307	1.604853e-48	2.234820e-46
MsaG000377	MsaG024823	0.854231	2.724389e-61	1.712470e-58
MsaG000377	MsaG026243	0.836487	1.663098e-56	5.825080e-54
MsaG000377	MsaG026516	0.837822	7.607010e-57	2.774636e-54
MsaG000377	MsaG026756	0.873169	3.722440e-67	4.940953e-64
MsaG000377	MsaG027028	0.803649	5.307930e-49	7.798984e-47
MsaG000377	MsaG027229	0.806272	1.510548e-49	2.359442e-47
MsaG000377	MsaG027255	0.853498	4.418701e-61	2.705654e-58
MsaG000377	MsaG027285	0.872816	4.885083e-67	6.383735e-64
MsaG000377	MsaG027322	0.861884	1.481341e-63	1.237631e-60
MsaG000377	MsaG027342	0.850442	3.227108e-60	1.775702e-57
MsaG000377	MsaG027367	0.816074	1.156856e-51	2.297992e-49
MsaG000377	MsaG027493	0.815137	1.865833e-51	3.619234e-49
MsaG000377	MsaG027500	0.815505	1.547403e-51	3.029618e-49
MsaG000377	MsaG027802	0.815485	1.563050e-51	3.058715e-49
MsaG000377	MsaG027929	0.890816	1.543021e-73	4.745212e-70
MsaG000377	MsaG027935	0.860703	3.381136e-63	2.700752e-60
MsaG000377	MsaG027969	0.817402	5.847099e-52	1.201761e-49
MsaG000377	MsaG028003	0.849243	6.955570e-60	3.673888e-57
MsaG000377	MsaG028282	0.839658	2.564190e-57	9.902688e-55
MsaG000377	MsaG028627	0.853103	5.727229e-61	3.458443e-58
MsaG000377	MsaG028650	0.828031	2.014675e-54	5.514182e-52
MsaG000377	MsaG028657	0.812743	6.254678e-51	1.142542e-48
MsaG000377	MsaG028668	0.814351	2.781256e-51	5.289342e-49
MsaG000377	MsaG028803	0.837601	8.663074e-57	3.138550e-54
MsaG000377	MsaG028842	0.807513	8.281522e-50	1.332030e-47
MsaG000377	MsaG028927	0.817681	5.060487e-52	1.047553e-49
MsaG000377	MsaG029819	0.803818	4.898476e-49	7.225563e-47
MsaG000377	MsaG029892	0.834041	6.849945e-56	2.229525e-53
MsaG000377	MsaG029916	0.819793	1.686822e-52	3.689503e-50
MsaG000377	MsaG030617	0.802950	7.398269e-49	1.069599e-46
MsaG000377	MsaG031482	0.800680	2.152798e-48	2.955841e-46
MsaG000377	MsaG032424	0.837975	6.949538e-57	2.546944e-54
MsaG000377	MsaG032814	0.804507	3.526488e-49	5.285552e-47
MsaG000377	MsaG035531	0.838186	6.137901e-57	2.264085e-54
MsaG000377	MsaG035553	0.812907	5.762230e-51	1.056891e-48
MsaG000377	MsaG035715	0.841571	8.133130e-58	3.336337e-55
MsaG000377	MsaG036704	0.809183	3.661614e-50	6.130798e-48
MsaG000377	MsaG037735	0.809440	3.226731e-50	5.436523e-48
MsaG000377	MsaG040482	0.821980	5.325766e-53	1.234421e-50
MsaG000377	MsaG040599	0.830540	4.989166e-55	1.466296e-52
MsaG000377	MsaG041280	0.809533	3.082439e-50	5.205060e-48
MsaG000377	MsaG041815	0.801598	1.400050e-48	1.962545e-46
MsaG000377	MsaG042149	0.808852	4.307726e-50	7.155545e-48
MsaG000377	MsaG042981	0.867549	2.542274e-65	2.662168e-62
MsaG000377	MsaG044108	0.832115	2.053237e-55	6.317091e-53
MsaG000377	MsaG044570	0.851893	1.262553e-60	7.306840e-58
MsaG000377	MsaG044602	0.827748	2.354894e-54	6.394401e-52
MsaG000377	MsaG044884	0.823716	2.107860e-53	5.120330e-51
MsaG000377	MsaG045008	0.833484	9.423365e-56	3.017365e-53
MsaG000377	MsaG045302	0.812849	5.932151e-51	1.086471e-48
MsaG000377	MsaG045275	0.803018	7.163828e-49	1.037343e-46
MsaG000377	MsaG045326	0.849706	5.174559e-60	2.776648e-57
MsaG000377	MsaG045332	0.807971	6.624034e-50	1.077233e-47
MsaG000377	MsaG045456	0.864189	2.897368e-64	2.650240e-61
MsaG000377	MsaG045665	0.802937	7.443212e-49	1.075787e-46
MsaG000377	MsaG045861	0.809350	3.373180e-50	5.670390e-48
MsaG000377	MsaG045868	0.816123	1.128149e-51	2.243810e-49
MsaG000377	MsaG046223	0.830907	4.060651e-55	1.206098e-52
MsaG000377	MsaG046172	0.836527	1.625278e-56	5.699079e-54
MsaG000377	MsaG046181	0.834797	4.433299e-56	1.476005e-53
MsaG000377	MsaG046480	0.817634	5.185626e-52	1.072151e-49
MsaG000377	MsaG046784	0.803588	5.464059e-49	8.017114e-47
MsaG000377	MsaG047001	0.805889	1.817186e-49	2.812676e-47
MsaG000377	MsaG002107	0.820998	8.954666e-53	2.022230e-50
MsaG000377	MsaG003008	0.887970	1.946627e-72	5.170200e-69
MsaG000377	MsaG001632	0.805569	2.120068e-49	3.256862e-47
MsaG000377	MsaG002683	0.835929	2.301500e-56	7.926877e-54
MsaG000377	MsaG001311	0.816689	8.439247e-52	1.702947e-49
MsaG000377	MsaG001614	0.801837	1.250993e-48	1.763172e-46
MsaG000377	MsaG001760	0.819720	1.752369e-52	3.825399e-50
MsaG000377	MsaG008818	0.821028	8.815063e-53	1.992275e-50
MsaG000377	MsaG007925	0.808286	5.681689e-50	9.310011e-48
MsaG000377	MsaG006538	0.803681	5.227555e-49	7.686640e-47
MsaG000377	MsaG008213	0.823528	2.331232e-53	5.633901e-51
MsaG000377	MsaG007899	0.806561	1.313863e-49	2.066231e-47
MsaG000377	MsaG013515	0.803150	6.727571e-49	9.771458e-47
MsaG000377	MsaG019320	0.817183	6.544263e-52	1.337529e-49
MsaG000377	MsaG019481	0.806159	1.595751e-49	2.485713e-47
MsaG000377	MsaG019406	0.814695	2.335723e-51	4.480544e-49
MsaG000377	MsaG027071	0.827449	2.775836e-54	7.474270e-52
MsaG000377	MsaG027141	0.812130	8.504391e-51	1.529953e-48
MsaG000377	MsaG028085	0.815505	1.547403e-51	3.029618e-49
MsaG000377	MsaG028008	0.829711	7.932194e-55	2.276720e-52
MsaG000377	MsaG028138	0.822096	5.005786e-53	1.163856e-50
MsaG000377	MsaG028048	0.804457	3.611970e-49	5.407308e-47
MsaG000377	MsaG027785	0.813294	4.742637e-51	8.783105e-49
MsaG000377	MsaG027659	0.821375	7.338718e-53	1.673818e-50
MsaG000377	MsaG031608	0.918917	2.189705e-86	3.813305e-82
MsaG000377	MsaG033833	0.812808	6.054908e-51	1.107842e-48
MsaG000377	MsaG031589	0.838090	6.494819e-57	2.388649e-54
MsaG000377	MsaG030552	0.825000	1.055239e-53	2.654465e-51
MsaG000377	MsaG033091	0.839986	2.107951e-57	8.225316e-55
MsaG000377	MsaG030622	0.862088	1.283523e-63	1.080867e-60
MsaG000377	MsaG032721	0.815582	1.487682e-51	2.918496e-49
MsaG000377	MsaG038135	0.824097	1.717432e-53	4.215164e-51
MsaG000377	MsaG037487	0.805354	2.350731e-49	3.593258e-47
MsaG000377	MsaG034916	0.813100	5.227706e-51	9.634998e-49
MsaG000377	MsaG037652	0.810564	1.852675e-50	3.207685e-48
MsaG000377	MsaG035337	0.812269	7.931109e-51	1.431765e-48
MsaG000377	MsaG036891	0.837087	1.170946e-56	4.176284e-54
MsaG000377	MsaG037837	0.816131	1.123775e-51	2.235527e-49
MsaG000377	MsaG035309	0.877385	1.369420e-68	2.191400e-65
MsaG000377	MsaG037829	0.835717	2.603863e-56	8.910700e-54
MsaG000377	MsaG041722	0.877248	1.527539e-68	2.429273e-65
MsaG000377	MsaG043789	0.816640	8.652933e-52	1.743834e-49
MsaG000377	MsaG042308	0.856221	7.226327e-62	4.880359e-59
MsaG000377	MsaG042389	0.817974	4.349743e-52	9.072814e-50
MsaG000377	MsaG042526	0.816633	8.687063e-52	1.750381e-49
MsaG000377	MsaG045902	0.854963	1.675824e-61	1.081182e-58
MsaG000377	MsaG043778	0.814562	2.499455e-51	4.778432e-49
MsaG000377	MsaG041725	0.816993	7.216608e-52	1.467730e-49
MsaG000377	MsaG041132	0.814020	3.288131e-51	6.201407e-49
MsaG000377	MsaG046904	0.850344	3.436163e-60	1.884327e-57

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000377	MtrunA17_Chr1g0152431	98.817	169	2	0	1	169	1	169	1.08e-125	351
MsaG000377	MtrunA17_Chr1g0152431	42.553	94	51	2	3	96	103	193	1.49e-14	68.2
MsaG000377	MtrunA17_Chr4g0059371	66.667	168	55	1	2	169	3	169	2.96e-83	243
MsaG000377	MtrunA17_Chr4g0059371	45.833	72	39	0	3	74	103	174	2.45e-15	70.1
MsaG000377	MtrunA17_Chr3g0113051	59.064	171	66	2	1	169	1	169	2.43e-68	206
MsaG000377	MtrunA17_Chr3g0113051	47.826	69	36	0	3	71	103	171	2.75e-18	78.2
MsaG000377	MtrunA17_Chr8g0386501	54.386	171	66	4	1	169	1	161	2.56e-58	181
MsaG000377	MtrunA17_Chr8g0386501	41.414	99	54	1	3	101	95	189	3.84e-19	80.9
MsaG000377	MtrunA17_Chr7g0247111	50.888	169	79	2	1	169	1	165	4.46e-58	181
MsaG000377	MtrunA17_Chr7g0247111	46.377	69	37	0	3	71	99	167	2.23e-15	70.9
MsaG000377	MtrunA17_Chr8g0349391	50.888	169	77	2	1	169	1	163	8.51e-58	179
MsaG000377	MtrunA17_Chr8g0349391	53.623	69	32	0	3	71	97	165	7.15e-19	80.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000377	AT1G10200.1	85.799	169	24	0	1	169	1	169	2.35e-109	310
MsaG000377	AT1G10200.1	44.444	72	40	0	3	74	103	174	7.50e-16	72.0
MsaG000377	AT1G10200.2	82.400	125	22	0	45	169	3	127	1.85e-75	223
MsaG000377	AT1G10200.2	44.444	72	40	0	3	74	61	132	1.47e-16	72.8
MsaG000377	AT2G39900.1	58.480	171	66	2	1	169	1	168	3.50e-67	204
MsaG000377	AT2G39900.1	49.275	69	35	0	3	71	102	170	1.81e-18	79.0
MsaG000377	AT3G55770.3	55.491	173	67	2	1	169	1	167	2.89e-65	199
MsaG000377	AT3G55770.3	50.725	69	34	0	3	71	101	169	1.73e-19	81.6
MsaG000377	AT3G55770.5	55.491	173	67	2	1	169	1	167	2.89e-65	199
MsaG000377	AT3G55770.5	50.725	69	34	0	3	71	101	169	1.73e-19	81.6
MsaG000377	AT3G55770.2	55.491	173	67	2	1	169	1	167	2.89e-65	199
MsaG000377	AT3G55770.2	50.725	69	34	0	3	71	101	169	1.73e-19	81.6
MsaG000377	AT3G55770.1	55.491	173	67	2	1	169	1	167	2.89e-65	199
MsaG000377	AT3G55770.1	50.725	69	34	0	3	71	101	169	1.73e-19	81.6
MsaG000377	AT2G45800.1	52.071	169	77	1	1	169	1	165	4.93e-59	184
MsaG000377	AT2G45800.1	50.725	69	34	0	3	71	99	167	2.20e-16	73.9
MsaG000377	AT1G01780.1	50.296	169	78	2	1	169	1	163	6.31e-58	180
MsaG000377	AT1G01780.1	52.174	69	33	0	3	71	97	165	5.22e-17	75.5
MsaG000377	AT3G55770.7	46.377	207	67	3	1	169	1	201	2.03e-57	180
MsaG000377	AT3G55770.7	33.981	103	34	1	3	71	101	203	1.13e-12	64.3
MsaG000377	AT3G61230.1	50.000	168	80	1	2	169	3	166	2.83e-57	179
MsaG000377	AT3G61230.1	36.792	106	67	0	3	108	100	205	2.05e-17	76.6
MsaG000377	AT3G55770.4	48.201	139	61	3	1	135	1	132	2.65e-40	133
MsaG000377	AT3G55770.4	50.000	66	33	0	103	168	3	68	2.38e-15	69.3
MsaG000377	AT3G55770.6	48.462	130	57	2	1	126	1	124	2.04e-38	128
MsaG000377	AT3G55770.6	50.000	66	33	0	103	168	3	68	1.93e-15	69.7
MsaG000377	AT2G45800.2	47.794	136	66	2	34	169	4	134	5.54e-37	126
MsaG000377	AT2G45800.2	50.725	69	34	0	3	71	68	136	1.09e-16	74.3

Find 35 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCATTATCTATATTTCTTTC+TGG	0.117591	1:-5090696	None:intergenic
TCCCTCATGTGCTATGTAAT+TGG	0.275186	1:-5091252	None:intergenic
AGCATTTGAAACAACTCTTA+TGG	0.319973	1:-5091202	None:intergenic
TTTGCTTGATCAGTTGAATA+TGG	0.339883	1:-5091295	None:intergenic
TTTATAAAGGTTACAGTGAA+TGG	0.352930	1:+5091170	MsaT000377.1:intron
GATCAACTGTTCAAAAGAAC+TGG	0.398776	1:+5090532	MsaT000377.1:CDS
CTTGAGGCTTTAGCTGCTGC+AGG	0.425078	1:-5090814	None:intergenic
GCTAAAGCCTCAAGTATGTT+TGG	0.441559	1:+5090823	MsaT000377.1:CDS
ACACTAATTACCTTCTCTGT+TGG	0.465114	1:-5090889	None:intergenic
GGAAATTTGAGCCAGCTTGA+AGG	0.475377	1:+5091318	MsaT000377.1:CDS
GGAACAAGGGACAAATGTTC+TGG	0.477611	1:+5090847	MsaT000377.1:CDS
CAAGTATGTTTGGTGGAACA+AGG	0.495604	1:+5090833	MsaT000377.1:CDS
TCTCATGGTCACCTTCAAGC+TGG	0.497810	1:-5091329	None:intergenic
TTGAAACAACTCTTATGGTA+AGG	0.498185	1:-5091197	None:intergenic
AGAAAGAAATATAGATAATG+AGG	0.518674	1:+5090698	MsaT000377.1:CDS
CCTTGAGGGTTCCTTTGCAG+TGG	0.520760	1:-5090054	None:intergenic
GAGAGAGACATAGACCTTGA+GGG	0.525903	1:-5090068	None:intergenic
GACTAATAGTACACCCTCCA+TGG	0.536605	1:-5091226	None:intergenic
GCTTGATCAGTTGAATATGG+TGG	0.560624	1:-5091292	None:intergenic
AGGAACAACTCAGAAGTGTA+TGG	0.560932	1:+5089952	MsaT000377.1:CDS
AGTTGTTTCAAATGCTGCCA+TGG	0.564010	1:+5091209	MsaT000377.1:CDS
GACATCTGAAACAAGCTTTG+TGG	0.565667	1:-5090030	None:intergenic
TTCCAATTACATAGCACATG+AGG	0.574672	1:+5091250	MsaT000377.1:CDS
TTCAGATGTCACCACTGCAA+AGG	0.582786	1:+5090043	MsaT000377.1:CDS
AAAGCCTCAAGTATGTTTGG+TGG	0.587944	1:+5090826	MsaT000377.1:CDS
GTTTCAAATGCTGCCATGGA+GGG	0.597804	1:+5091213	MsaT000377.1:CDS
TTGAACAGTTGATCAAAGTG+TGG	0.606620	1:-5090523	None:intergenic
TGTTCCACCAAACATACTTG+AGG	0.606764	1:-5090830	None:intergenic
AACAGTGTATCCAACAGAGA+AGG	0.613878	1:+5090879	MsaT000377.1:CDS
TCCAATTACATAGCACATGA+GGG	0.619052	1:+5091251	MsaT000377.1:CDS
TCATGTGCTATGTAATTGGA+AGG	0.623562	1:-5091248	None:intergenic
AAGTATGTTTGGTGGAACAA+GGG	0.641097	1:+5090834	MsaT000377.1:CDS
CCACTGCAAAGGAACCCTCA+AGG	0.664342	1:+5090054	MsaT000377.1:CDS
ATATTCAACTGATCAAGCAA+AGG	0.664962	1:+5091297	MsaT000377.1:CDS
TGTTTCAAATGCTGCCATGG+AGG	0.668776	1:+5091212	MsaT000377.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	5089941	5091337	5089941	ID=MsaG000377
Chr1	mRNA	5089941	5091337	5089941	ID=MsaT000377.1;Parent=MsaG000377
Chr1	exon	5089941	5090075	5089941	ID=MsaT000377.1.exon1;Parent=MsaT000377.1
Chr1	CDS	5089941	5090075	5089941	ID=cds.MsaT000377.1;Parent=MsaT000377.1
Chr1	exon	5090481	5090577	5090481	ID=MsaT000377.1.exon2;Parent=MsaT000377.1
Chr1	CDS	5090481	5090577	5090481	ID=cds.MsaT000377.1;Parent=MsaT000377.1
Chr1	exon	5090676	5090719	5090676	ID=MsaT000377.1.exon3;Parent=MsaT000377.1
Chr1	CDS	5090676	5090719	5090676	ID=cds.MsaT000377.1;Parent=MsaT000377.1
Chr1	exon	5090811	5090900	5090811	ID=MsaT000377.1.exon4;Parent=MsaT000377.1
Chr1	CDS	5090811	5090900	5090811	ID=cds.MsaT000377.1;Parent=MsaT000377.1
Chr1	exon	5091179	5091337	5091179	ID=MsaT000377.1.exon5;Parent=MsaT000377.1
Chr1	CDS	5091179	5091337	5091179	ID=cds.MsaT000377.1;Parent=MsaT000377.1

Gene Sequence

>MsaT000377.1

ATGGCATTTGCAGGAACAACTCAGAAGTGTATGGCTTGTAGCAAAACAGTTTATCTTGTTGATAAGTTAACTGCTGATAATAGAATTTTCCACAAAGCTTGTTTCAGATGTCACCACTGCAAAGGAACCCTCAAGCTAAGCAACTACAATTCTTTTGAGGGAGTTCTTTACTGCAGACCACACTTTGATCAACTGTTCAAAAGAACTGGTAGCCTTGAAAAAAGCTTTGAAGGGACACCAAAAATTGTCAAACCAGAAAGAAATATAGATAATGAGAAACCTGCAGCAGCTAAAGCCTCAAGTATGTTTGGTGGAACAAGGGACAAATGTTCTGGTTGTCAGAAAACAGTGTATCCAACAGAGAAGGTTACAGTGAATGGAACTCCTTACCATAAGAGTTGTTTCAAATGCTGCCATGGAGGGTGTACTATTAGTCCTTCCAATTACATAGCACATGAGGGAAAACTCTACTGCAAACACCACCATATTCAACTGATCAAGCAAAGGAAATTTGAGCCAGCTTGA

Protein sequence

>MsaT000377.1

MAFAGTTQKCMACSKTVYLVDKLTADNRIFHKACFRCHHCKGTLKLSNYNSFEGVLYCRPHFDQLFKRTGSLEKSFEGTPKIVKPERNIDNEKPAAAKASSMFGGTRDKCSGCQKTVYPTEKVTVNGTPYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKQRKFEPA*