Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG000398 | XP_013465961.1 | 95.820 | 646 | 13 | 4 | 1 | 632 | 1 | 646 | 0.0 | 1249 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG000398 | sp|Q6AWY3|GRF6_ORYSJ | 43.478 | 506 | 215 | 17 | 129 | 631 | 157 | 594 | 2.11e-98 | 316 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| MsaG000398 | TF | GRF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG000398 | MtrunA17_Chr1g0152191 | 95.820 | 646 | 13 | 4 | 1 | 632 | 1 | 646 | 0.0 | 1249 |
| MsaG000398 | MtrunA17_Chr2g0300511 | 58.407 | 113 | 47 | 0 | 130 | 242 | 7 | 119 | 1.35e-40 | 151 |
| MsaG000398 | MtrunA17_Chr4g0070591 | 53.731 | 134 | 51 | 3 | 130 | 262 | 9 | 132 | 1.35e-40 | 152 |
| MsaG000398 | MtrunA17_Chr8g0343881 | 55.357 | 112 | 46 | 1 | 131 | 242 | 12 | 119 | 1.30e-39 | 148 |
| MsaG000398 | MtrunA17_Chr4g0021261 | 51.825 | 137 | 49 | 3 | 130 | 266 | 25 | 144 | 5.82e-37 | 140 |
| MsaG000398 | MtrunA17_Chr5g0409471 | 57.522 | 113 | 32 | 2 | 130 | 242 | 16 | 112 | 4.18e-36 | 138 |
| MsaG000398 | MtrunA17_Chr7g0265931 | 55.556 | 117 | 44 | 3 | 128 | 242 | 76 | 186 | 8.15e-33 | 130 |
| MsaG000398 | MtrunA17_Chr3g0127641 | 54.783 | 115 | 26 | 3 | 130 | 242 | 112 | 202 | 4.64e-32 | 130 |
| MsaG000398 | MtrunA17_Chr8g0351521 | 43.750 | 112 | 45 | 3 | 131 | 242 | 55 | 148 | 2.61e-20 | 94.0 |
| MsaG000398 | MtrunA17_Chr8g0351521 | 35.878 | 131 | 77 | 4 | 145 | 271 | 248 | 375 | 9.59e-12 | 67.4 |
| MsaG000398 | MtrunA17_Chr8g0351291 | 50.000 | 58 | 25 | 1 | 183 | 236 | 32 | 89 | 1.80e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsaG000398 | AT2G22840.1 | 38.907 | 604 | 199 | 21 | 27 | 597 | 22 | 488 | 7.97e-91 | 291 |
| MsaG000398 | AT4G37740.1 | 38.315 | 629 | 211 | 27 | 32 | 614 | 28 | 525 | 1.44e-84 | 275 |
| MsaG000398 | AT3G13960.1 | 58.407 | 113 | 43 | 1 | 130 | 242 | 16 | 124 | 5.31e-41 | 154 |
| MsaG000398 | AT2G36400.1 | 56.522 | 115 | 49 | 1 | 128 | 242 | 74 | 187 | 1.58e-33 | 133 |
| MsaG000398 | AT2G06200.1 | 45.342 | 161 | 75 | 4 | 130 | 278 | 6 | 165 | 2.28e-32 | 125 |
| MsaG000398 | AT2G06200.2 | 45.342 | 161 | 75 | 4 | 130 | 278 | 45 | 204 | 2.45e-32 | 127 |
| MsaG000398 | AT3G52910.1 | 50.413 | 121 | 48 | 2 | 128 | 242 | 80 | 194 | 8.11e-31 | 125 |
| MsaG000398 | AT4G24150.3 | 48.696 | 115 | 59 | 0 | 128 | 242 | 109 | 223 | 4.45e-26 | 112 |
| MsaG000398 | AT4G24150.2 | 48.696 | 115 | 59 | 0 | 128 | 242 | 147 | 261 | 8.64e-26 | 111 |
| MsaG000398 | AT5G53660.1 | 43.939 | 132 | 53 | 2 | 124 | 255 | 53 | 163 | 7.03e-24 | 104 |
| MsaG000398 | AT4G24150.1 | 45.714 | 140 | 51 | 5 | 128 | 242 | 147 | 286 | 1.86e-23 | 104 |
| MsaG000398 | AT2G45480.2 | 49.074 | 108 | 47 | 3 | 134 | 239 | 28 | 129 | 2.33e-22 | 98.6 |
| MsaG000398 | AT2G45480.1 | 49.074 | 108 | 47 | 3 | 134 | 239 | 26 | 127 | 1.78e-21 | 98.2 |
| MsaG000398 | AT2G45480.1 | 46.479 | 71 | 36 | 2 | 198 | 268 | 304 | 372 | 4.94e-13 | 72.0 |
| MsaG000398 | AT2G45480.3 | 49.074 | 108 | 47 | 3 | 134 | 239 | 28 | 129 | 1.88e-21 | 97.8 |
| MsaG000398 | AT2G45480.3 | 46.479 | 71 | 36 | 2 | 198 | 268 | 306 | 374 | 4.81e-13 | 72.0 |
| MsaG000398 | AT2G06200.3 | 46.237 | 93 | 44 | 2 | 192 | 278 | 1 | 93 | 1.70e-16 | 78.2 |
Find 148 sgRNAs with CRISPR-Local
Find sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAACTCTCCCAAGTTAT+TGG | 0.152774 | 1:+5371311 | None:intergenic |
| AAGAATATGAACAACCTTAT+TGG | 0.157641 | 1:-5372507 | MsaT000398.1:CDS |
| CATAAGACAATGCAGCATTT+TGG | 0.211480 | 1:+5374606 | None:intergenic |
| AATAAGGTTGTTCATATTCT+TGG | 0.221832 | 1:+5372509 | None:intergenic |
| AACCATCAGTCATGAGATTT+AGG | 0.225448 | 1:+5371192 | None:intergenic |
| GTGATCATCATTTGCATTGT+AGG | 0.266573 | 1:+5371244 | None:intergenic |
| CTTGGTGGAGTGAGTTTAGA+AGG | 0.269348 | 1:-5374893 | MsaT000398.1:CDS |
| TCTTCATCTATTGTTGTTCC+TGG | 0.272838 | 1:-5372579 | MsaT000398.1:CDS |
| TCTGTTCTCCTACACCTTCC+TGG | 0.276185 | 1:+5372819 | None:intergenic |
| ATACTACAAAGCAAGCTAAT+TGG | 0.301022 | 1:-5371337 | MsaT000398.1:CDS |
| CTCCTACACCTTCCTGGTTC+CGG | 0.301178 | 1:+5372825 | None:intergenic |
| ACAGAAAACCTCCACTTTGC+TGG | 0.307229 | 1:-5371711 | MsaT000398.1:CDS |
| AAGCATTATCTTGTCCAATA+AGG | 0.312606 | 1:+5372493 | None:intergenic |
| GAGCCTGCATCTCGGTTTGT+AGG | 0.333439 | 1:+5371656 | None:intergenic |
| TCCTCGAGAAACAATGAATT+CGG | 0.337712 | 1:-5371767 | MsaT000398.1:CDS |
| GTTTGAACAGGTTATAGTTC+TGG | 0.342225 | 1:-5373826 | MsaT000398.1:intron |
| AGTTTGTGCAATGATCTTCT+AGG | 0.349835 | 1:-5371032 | MsaT000398.1:CDS |
| TGGAGTGAGTTTAGAAGGTT+TGG | 0.355173 | 1:-5374888 | MsaT000398.1:CDS |
| TCATATTCTTGGAATGTTCC+TGG | 0.358480 | 1:+5372520 | None:intergenic |
| ACACCTAACCCCATTTGAAT+AGG | 0.359219 | 1:+5371404 | None:intergenic |
| AACTCACACTTTCACCTCTT+AGG | 0.372743 | 1:-5371445 | MsaT000398.1:CDS |
| CTAATTGGATTCCAATAACT+TGG | 0.378217 | 1:-5371322 | MsaT000398.1:CDS |
| TTGATTGATGCAGTGGGATG+GGG | 0.381772 | 1:-5372882 | MsaT000398.1:intron |
| TTGGTGATCTGAGTGAGTTT+TGG | 0.385367 | 1:+5371598 | None:intergenic |
| CACTCTTAGCTTTGCACACC+AGG | 0.388983 | 1:-5372538 | MsaT000398.1:CDS |
| GTGAAGATGAACCGAAGGTT+CGG | 0.390750 | 1:+5371684 | None:intergenic |
| TTCCACCAGTGGTGAGAGCC+TGG | 0.403872 | 1:+5372685 | None:intergenic |
| CCACAGGCTTTCTTGAACGA+TGG | 0.404313 | 1:+5372721 | None:intergenic |
| GAAATAGACCCTATTCAAAT+GGG | 0.406443 | 1:-5371413 | MsaT000398.1:CDS |
| AGAAATAGACCCTATTCAAA+TGG | 0.409611 | 1:-5371414 | MsaT000398.1:CDS |
| AAGCCTGTGGAAGGCCAATC+TGG | 0.411103 | 1:-5372708 | MsaT000398.1:CDS |
| ACCATCAGTCATGAGATTTA+GGG | 0.418748 | 1:+5371193 | None:intergenic |
| TGGCCAGATTGGCCTTCCAC+AGG | 0.420452 | 1:+5372705 | None:intergenic |
| TCTGGCCAGGCTCTCACCAC+TGG | 0.421683 | 1:-5372690 | MsaT000398.1:CDS |
| TGAAGATGAACCGAAGGTTC+GGG | 0.426118 | 1:+5371685 | None:intergenic |
| TTTGATTGATGCAGTGGGAT+GGG | 0.426520 | 1:-5372883 | MsaT000398.1:intron |
| AACAACACCGATCCGGAACC+AGG | 0.428029 | 1:-5372837 | MsaT000398.1:CDS |
| TTGCTGGGAACCCGAACCTT+CGG | 0.432840 | 1:-5371695 | MsaT000398.1:CDS |
| AATAACTTGGGAGAGTTCAA+TGG | 0.434636 | 1:-5371309 | MsaT000398.1:CDS |
| ATTTGGATATGTTAGGCAAA+TGG | 0.438818 | 1:-5370788 | MsaT000398.1:intron |
| CCTCGAGAAACAATGAATTC+GGG | 0.439367 | 1:-5371766 | MsaT000398.1:CDS |
| TAACTGCACATACATGCATT+TGG | 0.440306 | 1:+5373631 | None:intergenic |
| CACCTAACCCCATTTGAATA+GGG | 0.440538 | 1:+5371405 | None:intergenic |
| AGTAGTAGCAGCTGTATTTG+TGG | 0.442455 | 1:+5372662 | None:intergenic |
| TGGTGAGAGCCTGGCCAGAT+TGG | 0.445236 | 1:+5372694 | None:intergenic |
| AAATCTCATGACTGATGGTT+GGG | 0.448530 | 1:-5371189 | MsaT000398.1:CDS |
| ATGGATGGAGTTGGAACATC+AGG | 0.449683 | 1:-5373770 | MsaT000398.1:CDS |
| TGTGGAAGGCCAATCTGGCC+AGG | 0.452012 | 1:-5372703 | MsaT000398.1:CDS |
| AATGCAAATGATGATCACTA+TGG | 0.452218 | 1:-5371239 | MsaT000398.1:CDS |
| TTACTTAAACAAGAGAGATC+TGG | 0.453042 | 1:-5374812 | MsaT000398.1:CDS |
| TTCTGCCCTTGGACTACTAC+CGG | 0.453252 | 1:+5371082 | None:intergenic |
| GTCCTTCAAAAGACTGCATT+CGG | 0.456928 | 1:-5371125 | MsaT000398.1:CDS |
| AGAAAAGCCCTTGATTCTGC+TGG | 0.462621 | 1:-5373685 | MsaT000398.1:CDS |
| CTGCTGCCAACACCATCAAC+AGG | 0.462743 | 1:-5372467 | MsaT000398.1:intron |
| CAGAAAACCTCCACTTTGCT+GGG | 0.465527 | 1:-5371710 | MsaT000398.1:CDS |
| TTCTGACCTGTTGATGGTGT+TGG | 0.470559 | 1:+5372461 | None:intergenic |
| ATTTCTCTTGATAGCCTAAG+AGG | 0.472531 | 1:+5371431 | None:intergenic |
| CCGGTTGGCGATGATCCAAT+TGG | 0.472751 | 1:+5371149 | None:intergenic |
| TCTAGAGTGGGTGGCAGCAT+TGG | 0.473483 | 1:+5371851 | None:intergenic |
| TCTAGTTACAACAGAAATAC+AGG | 0.475853 | 1:-5374563 | MsaT000398.1:intron |
| TGGTACAACAACAATGGATC+TGG | 0.476248 | 1:-5374836 | MsaT000398.1:CDS |
| AGCCTGCATCTCGGTTTGTA+GGG | 0.477728 | 1:+5371657 | None:intergenic |
| GGGATGGGGAGGATTCCATC+TGG | 0.478367 | 1:-5372868 | MsaT000398.1:CDS |
| CTTTGGTTTCAACTCTAGAG+TGG | 0.478958 | 1:+5371838 | None:intergenic |
| TGTTTCTAAATGGATCTTGG+TGG | 0.483588 | 1:-5374908 | None:intergenic |
| TAGATAAGCCAGCAGAATCA+AGG | 0.485816 | 1:+5373677 | None:intergenic |
| ATTCAAATGGGGTTAGGTGT+TGG | 0.489350 | 1:-5371401 | MsaT000398.1:CDS |
| AGTTCAATGGGTGGTCCACT+TGG | 0.489957 | 1:-5371296 | MsaT000398.1:CDS |
| AATCACAATAGTCCTCCAAT+TGG | 0.497889 | 1:-5371164 | MsaT000398.1:CDS |
| CCAATTGGATCATCGCCAAC+CGG | 0.498011 | 1:-5371149 | MsaT000398.1:CDS |
| AGCTCGACATGCAGTCTGAT+AGG | 0.498577 | 1:-5371541 | MsaT000398.1:CDS |
| GACCATTCACACCTTCTCAA+TGG | 0.498886 | 1:-5373789 | MsaT000398.1:CDS |
| GGTGGCAGCATTGGTAGTGC+AGG | 0.500285 | 1:+5371860 | None:intergenic |
| GACCCTATTCAAATGGGGTT+AGG | 0.500567 | 1:-5371407 | MsaT000398.1:CDS |
| TTCAACACCGATGACTTCCT+CGG | 0.501884 | 1:-5371504 | MsaT000398.1:CDS |
| AACCCTACAAACCGAGATGC+AGG | 0.503273 | 1:-5371659 | MsaT000398.1:CDS |
| TGATGAACCACTTGGAGTAA+TGG | 0.508265 | 1:+5372632 | None:intergenic |
| TTTGGTTTCAACTCTAGAGT+GGG | 0.508283 | 1:+5371839 | None:intergenic |
| TGAAGGGTTCAGAAGGGAAT+CGG | 0.508397 | 1:+5371733 | None:intergenic |
| GATATGTTAGGCAAATGGTT+TGG | 0.516188 | 1:-5370783 | MsaT000398.1:intron |
| AACAATAAAACAACTCAAGA+AGG | 0.516329 | 1:-5371059 | MsaT000398.1:CDS |
| CAGGCTCTCAGCAATCCCTT+AGG | 0.516400 | 1:-5371640 | MsaT000398.1:CDS |
| ATTGATGCAGTGGGATGGGG+AGG | 0.517801 | 1:-5372879 | MsaT000398.1:intron |
| ATACTCGAACAACACCGATC+CGG | 0.522042 | 1:-5372844 | MsaT000398.1:CDS |
| AGTCGTCGATAAAATGCCTA+AGG | 0.528289 | 1:+5371624 | None:intergenic |
| ATCCATTGAGAAGGTGTGAA+TGG | 0.529637 | 1:+5373787 | None:intergenic |
| ATCTGCTTTGATGAACCACT+TGG | 0.531326 | 1:+5372624 | None:intergenic |
| CCCGAATTCATTGTTTCTCG+AGG | 0.531393 | 1:+5371766 | None:intergenic |
| ATAACTTGGGAGAGTTCAAT+GGG | 0.532863 | 1:-5371308 | MsaT000398.1:CDS |
| TTTCTGTTGTAACTAGACAT+AGG | 0.533184 | 1:+5374569 | None:intergenic |
| TATAGTTCTGGAAGCATGCA+TGG | 0.536987 | 1:-5373814 | MsaT000398.1:CDS |
| TAAATCTCATGACTGATGGT+TGG | 0.537129 | 1:-5371190 | MsaT000398.1:CDS |
| GGAGAACAGATGGAAAGAAA+TGG | 0.537455 | 1:-5372806 | MsaT000398.1:CDS |
| ACACCTTCCTGGTTCCGGAT+CGG | 0.539895 | 1:+5372830 | None:intergenic |
| TCATCTATTGTTGTTCCTGG+TGG | 0.540775 | 1:-5372576 | MsaT000398.1:CDS |
| AATGGGTGGTCCACTTGGAG+AGG | 0.548361 | 1:-5371291 | MsaT000398.1:CDS |
| CACCAACATCATAACCGCTC+AGG | 0.548639 | 1:-5371581 | MsaT000398.1:CDS |
| ATTCACACCTTCTCAATGGA+TGG | 0.550208 | 1:-5373785 | MsaT000398.1:CDS |
| TGTTGTAACTAGACATAGGA+TGG | 0.561408 | 1:+5374573 | None:intergenic |
| ACCTTCTCAATGGATGGAGT+TGG | 0.562452 | 1:-5373779 | MsaT000398.1:CDS |
| TCAGACTGCATGTCGAGCTC+CGG | 0.562970 | 1:+5371545 | None:intergenic |
| AGATAAGCCAGCAGAATCAA+GGG | 0.564902 | 1:+5373678 | None:intergenic |
| GGAACAACAATAGATGAAGA+AGG | 0.565252 | 1:+5372582 | None:intergenic |
| GATCTTCTAGGATCAACTCT+TGG | 0.567836 | 1:-5371020 | MsaT000398.1:intron |
| ATGAAGTCCGAGGAAGTCAT+CGG | 0.569735 | 1:+5371497 | None:intergenic |
| GCCCTAAATCTCATGACTGA+TGG | 0.570545 | 1:-5371194 | MsaT000398.1:CDS |
| GGCCAGGCTCTCACCACTGG+TGG | 0.570680 | 1:-5372687 | MsaT000398.1:CDS |
| GGTTTCAACTCTAGAGTGGG+TGG | 0.570696 | 1:+5371842 | None:intergenic |
| TGTATTTGTGGTTCCACCAG+TGG | 0.570943 | 1:+5372674 | None:intergenic |
| GGAAGGTGTAGGAGAACAGA+TGG | 0.576607 | 1:-5372816 | MsaT000398.1:CDS |
| CAACACTAGTGAGAGGATGC+AGG | 0.577864 | 1:-5371888 | MsaT000398.1:CDS |
| AATAAATGGTACAACAACAA+TGG | 0.583357 | 1:-5374842 | MsaT000398.1:CDS |
| CGTTCAAGAAAGCCTGTGGA+AGG | 0.583949 | 1:-5372717 | MsaT000398.1:CDS |
| GGATGGGGAGGATTCCATCT+GGG | 0.587603 | 1:-5372867 | MsaT000398.1:CDS |
| ACTTCAACCATTACTCCAAG+TGG | 0.590678 | 1:-5372639 | MsaT000398.1:CDS |
| AATGATGATCACTATGGCAG+AGG | 0.596008 | 1:-5371233 | MsaT000398.1:CDS |
| TAATTGGATTCCAATAACTT+GGG | 0.596671 | 1:-5371321 | MsaT000398.1:CDS |
| GTTGGCGATGATCCAATTGG+AGG | 0.597813 | 1:+5371152 | None:intergenic |
| TCGGGTTCCCAGCAAAGTGG+AGG | 0.601917 | 1:+5371703 | None:intergenic |
| ACATACATGCATTTGGTCTG+AGG | 0.603882 | 1:+5373638 | None:intergenic |
| TTGGAAACAGTGTTGCCACC+AGG | 0.605229 | 1:+5372561 | None:intergenic |
| TTGATCAAAAGTACTGCGAA+AGG | 0.605510 | 1:-5372761 | MsaT000398.1:CDS |
| TAGCGCCGGTAGTAGTCCAA+GGG | 0.611402 | 1:-5371087 | MsaT000398.1:CDS |
| GTAGCGCCGGTAGTAGTCCA+AGG | 0.615873 | 1:-5371088 | MsaT000398.1:CDS |
| CACCTGAGCGGTTATGATGT+TGG | 0.615910 | 1:+5371579 | None:intergenic |
| ATTGCTGAGAGCCTGCATCT+CGG | 0.615994 | 1:+5371648 | None:intergenic |
| TCCAACTCCATCCATTGAGA+AGG | 0.621452 | 1:+5373778 | None:intergenic |
| CACTCTAGAGTTGAAACCAA+AGG | 0.624902 | 1:-5371837 | MsaT000398.1:CDS |
| CAACATCATAACCGCTCAGG+TGG | 0.625010 | 1:-5371578 | MsaT000398.1:CDS |
| GTGTGCAAAGCTAAGAGTGT+TGG | 0.626716 | 1:+5372542 | None:intergenic |
| GTCGTCGATAAAATGCCTAA+GGG | 0.628833 | 1:+5371625 | None:intergenic |
| TCACTTTCGAATAGTAGCGC+CGG | 0.636444 | 1:-5371101 | MsaT000398.1:CDS |
| CCATCGTTCAAGAAAGCCTG+TGG | 0.641306 | 1:-5372721 | MsaT000398.1:CDS |
| GGTTCGGGTTCCCAGCAAAG+TGG | 0.643195 | 1:+5371700 | None:intergenic |
| TTTCTGTGAAGGGTTCAGAA+GGG | 0.643231 | 1:+5371727 | None:intergenic |
| AGATGAAGAACCTCTCCAAG+TGG | 0.649574 | 1:+5371281 | None:intergenic |
| ATCCGGAACCAGGAAGGTGT+AGG | 0.650872 | 1:-5372827 | MsaT000398.1:CDS |
| AGAATAACAACACTAGTGAG+AGG | 0.653602 | 1:-5371895 | MsaT000398.1:CDS |
| ACACCGATCCGGAACCAGGA+AGG | 0.656785 | 1:-5372833 | MsaT000398.1:CDS |
| TGTTGTTCGAGTATCCCAGA+TGG | 0.657354 | 1:+5372853 | None:intergenic |
| ATCAGTCATGAGATTTAGGG+CGG | 0.658516 | 1:+5371196 | None:intergenic |
| ACTAGTGAGAGGATGCAGGA+TGG | 0.682389 | 1:-5371884 | MsaT000398.1:CDS |
| AAATAGACCCTATTCAAATG+GGG | 0.682714 | 1:-5371412 | MsaT000398.1:CDS |
| CGTGAACGACATGAAGTCCG+AGG | 0.693679 | 1:+5371487 | None:intergenic |
| ACTTGGGAGAGTTCAATGGG+TGG | 0.696784 | 1:-5371305 | MsaT000398.1:CDS |
| ATAGGCATAAGCAAATGATG+AGG | 0.701369 | 1:+5373709 | None:intergenic |
| TGCGAAAGGCATATGAACAG+AGG | 0.714010 | 1:-5372747 | MsaT000398.1:CDS |
| AGTTCTGGAAGCATGCATGG+AGG | 0.751541 | 1:-5373811 | MsaT000398.1:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 5370779 | 5374921 | 5370779 | ID=MsaG000398 |
| Chr1 | mRNA | 5370779 | 5374921 | 5370779 | ID=MsaT000398.1;Parent=MsaG000398 |
| Chr1 | exon | 5370779 | 5370795 | 5370779 | ID=MsaT000398.1.exon5;Parent=MsaT000398.1 |
| Chr1 | CDS | 5370779 | 5370795 | 5370779 | ID=cds.MsaT000398.1;Parent=MsaT000398.1 |
| Chr1 | exon | 5371021 | 5371937 | 5371021 | ID=MsaT000398.1.exon4;Parent=MsaT000398.1 |
| Chr1 | CDS | 5371021 | 5371937 | 5371021 | ID=cds.MsaT000398.1;Parent=MsaT000398.1 |
| Chr1 | exon | 5372468 | 5372891 | 5372468 | ID=MsaT000398.1.exon3;Parent=MsaT000398.1 |
| Chr1 | CDS | 5372468 | 5372891 | 5372468 | ID=cds.MsaT000398.1;Parent=MsaT000398.1 |
| Chr1 | exon | 5373644 | 5373838 | 5373644 | ID=MsaT000398.1.exon2;Parent=MsaT000398.1 |
| Chr1 | CDS | 5373644 | 5373838 | 5373644 | ID=cds.MsaT000398.1;Parent=MsaT000398.1 |
| Chr1 | exon | 5374564 | 5374921 | 5374564 | ID=MsaT000398.1.exon1;Parent=MsaT000398.1 |
| Chr1 | CDS | 5374564 | 5374921 | 5374564 | ID=cds.MsaT000398.1;Parent=MsaT000398.1 |
| Gene Sequence |
| Protein sequence |