AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG000592

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG000592 MtrunA17_Chr1g0150271 93.548 248 15 1 249 496 9 255 1.49e-171 483
MsaG000592 MtrunA17_Chr1g0150271 54.630 108 48 1 90 197 53 159 2.90e-33 126
MsaG000592 MtrunA17_Chr1g0150281 93.774 257 15 1 1 256 1 257 7.57e-171 482
MsaG000592 MtrunA17_Chr1g0150281 46.626 163 74 4 323 479 122 277 1.95e-39 144
MsaG000592 MtrunA17_Chr3g0136961 55.596 277 92 9 1 256 1 267 1.07e-83 260
MsaG000592 MtrunA17_Chr3g0136961 41.250 160 83 2 326 474 123 282 3.62e-35 133
MsaG000592 MtrunA17_Chr2g0333851 44.534 247 117 7 24 258 58 296 2.65e-51 177
MsaG000592 MtrunA17_Chr2g0333851 37.931 261 120 7 255 480 62 315 2.84e-38 142
MsaG000592 MtrunA17_Chr4g0001361 47.486 179 77 4 25 196 51 219 5.03e-39 144
MsaG000592 MtrunA17_Chr4g0001361 36.059 269 135 5 243 474 42 310 7.19e-39 144
MsaG000592 MtrunA17_Chr5g0418191 32.830 265 138 12 140 401 152 379 3.34e-30 122
MsaG000592 MtrunA17_Chr5g0418191 47.945 73 35 2 124 196 307 376 4.91e-17 83.2
MsaG000592 MtrunA17_Chr5g0418191 50.820 61 28 2 342 402 152 210 4.99e-13 70.9
MsaG000592 MtrunA17_Chr7g0270831 40.223 179 76 6 252 401 100 276 6.58e-30 121
MsaG000592 MtrunA17_Chr7g0270831 32.340 235 121 5 6 215 71 292 4.91e-27 113
MsaG000592 MtrunA17_Chr5g0445311 29.240 342 176 10 79 401 129 423 7.75e-30 122
MsaG000592 MtrunA17_Chr3g0106491 31.481 270 133 9 140 401 199 424 1.45e-29 121
MsaG000592 MtrunA17_Chr3g0106491 46.575 73 36 2 124 196 352 421 4.24e-16 80.9
MsaG000592 MtrunA17_Chr4g0004911 27.481 262 139 5 140 401 185 395 4.62e-29 119
MsaG000592 MtrunA17_Chr4g0004911 41.304 92 48 3 105 196 307 392 1.66e-15 79.0
MsaG000592 MtrunA17_Chr4g0004911 45.902 61 32 1 341 401 184 243 5.92e-12 67.8
MsaG000592 MtrunA17_Chr5g0447701 33.333 264 129 16 140 401 93 311 8.11e-29 117
MsaG000592 MtrunA17_Chr5g0447701 52.703 74 32 2 124 197 239 309 2.37e-18 87.0
MsaG000592 MtrunA17_Chr3g0079691 32.500 280 165 11 140 401 281 554 3.49e-28 118
MsaG000592 MtrunA17_Chr3g0079691 34.921 126 70 4 124 240 482 604 1.67e-15 79.3
MsaG000592 MtrunA17_Chr3g0101131 27.042 355 192 12 78 401 156 474 4.87e-28 117
MsaG000592 MtrunA17_Chr3g0101131 34.483 145 82 5 62 196 330 471 8.11e-19 89.7
MsaG000592 MtrunA17_Chr2g0288871 31.925 213 101 3 28 196 150 362 7.10e-26 110
MsaG000592 MtrunA17_Chr2g0288871 54.795 73 33 0 329 401 293 365 1.90e-22 100
MsaG000592 MtrunA17_Chr4g0042831 31.716 268 101 12 140 401 146 337 8.58e-26 108
MsaG000592 MtrunA17_Chr4g0042831 46.341 82 38 3 115 196 259 334 7.34e-17 82.4
MsaG000592 MtrunA17_Chr3g0099641 48.421 95 47 1 323 417 235 327 7.54e-25 107
MsaG000592 MtrunA17_Chr3g0099641 46.739 92 49 0 124 215 236 327 1.90e-23 103
MsaG000592 MtrunA17_Chr4g0051181 59.091 66 27 0 336 401 238 303 1.52e-23 103
MsaG000592 MtrunA17_Chr4g0051181 52.564 78 37 0 119 196 223 300 1.07e-22 100
MsaG000592 MtrunA17_Chr4g0060271 52.439 82 37 1 320 401 236 315 4.11e-23 102
MsaG000592 MtrunA17_Chr4g0060271 57.333 75 32 0 122 196 238 312 1.12e-22 101
MsaG000592 MtrunA17_Chr4g0075201 30.332 211 98 5 25 196 124 324 8.53e-23 101
MsaG000592 MtrunA17_Chr4g0075201 59.091 66 27 0 336 401 262 327 2.58e-22 99.8
MsaG000592 MtrunA17_Chr7g0216891 46.739 92 49 0 122 213 202 293 1.53e-22 100
MsaG000592 MtrunA17_Chr7g0216891 42.982 114 58 3 285 398 170 276 5.61e-22 99.4
MsaG000592 MtrunA17_Chr2g0302391 40.323 124 63 3 91 205 156 277 7.87e-22 97.8
MsaG000592 MtrunA17_Chr2g0302391 50.575 87 40 2 339 425 209 292 1.41e-21 97.1
MsaG000592 MtrunA17_Chr2g0322391 48.889 90 46 0 124 213 334 423 7.91e-22 99.0
MsaG000592 MtrunA17_Chr2g0322391 52.055 73 35 0 329 401 337 409 2.59e-21 97.4
MsaG000592 MtrunA17_Chr4g0025051 38.211 123 63 3 279 401 286 395 2.85e-21 97.1
MsaG000592 MtrunA17_Chr4g0025051 43.000 100 57 0 116 215 312 411 2.21e-20 94.4
MsaG000592 MtrunA17_Chr4g0025061 53.030 66 31 0 336 401 355 420 9.34e-20 92.4
MsaG000592 MtrunA17_Chr4g0025061 45.652 92 50 0 124 215 345 436 1.38e-19 92.0
MsaG000592 MtrunA17_Chr1g0194481 41.667 96 51 2 123 218 146 236 3.49e-19 88.6
MsaG000592 MtrunA17_Chr1g0194481 50.769 65 31 1 340 404 157 220 3.37e-16 79.7
MsaG000592 MtrunA17_Chr4g0074001 27.341 267 154 10 140 401 187 418 5.45e-19 89.7
MsaG000592 MtrunA17_Chr5g0443131 47.297 74 34 2 123 196 145 213 3.85e-18 85.1
MsaG000592 MtrunA17_Chr5g0443131 48.387 62 31 1 340 401 156 216 7.17e-15 75.5
MsaG000592 MtrunA17_Chr4g0051881 57.895 57 23 1 140 196 179 234 4.50e-18 85.5
MsaG000592 MtrunA17_Chr4g0051881 41.111 90 43 3 340 420 177 265 5.30e-15 76.3
MsaG000592 MtrunA17_Chr7g0270191 48.052 77 37 2 120 196 128 201 5.16e-18 84.7
MsaG000592 MtrunA17_Chr7g0270191 46.053 76 38 2 340 415 144 216 2.55e-15 76.6
MsaG000592 MtrunA17_Chr5g0401821 52.632 57 27 0 140 196 200 256 8.03e-18 83.6
MsaG000592 MtrunA17_Chr5g0401821 50.000 62 31 0 339 400 197 258 6.37e-16 77.8
MsaG000592 MtrunA17_Chr5g0418781 47.297 74 34 2 123 196 112 180 1.37e-17 83.2
MsaG000592 MtrunA17_Chr5g0418781 37.615 109 57 4 340 438 123 230 7.71e-14 72.0
MsaG000592 MtrunA17_Chr1g0147881 36.538 104 55 1 93 196 227 319 1.40e-17 84.0
MsaG000592 MtrunA17_Chr1g0147881 46.774 62 33 0 339 400 260 321 4.33e-15 76.6
MsaG000592 MtrunA17_Chr4g0053281 49.231 65 33 0 140 204 267 331 1.46e-17 84.0
MsaG000592 MtrunA17_Chr4g0053281 51.613 62 30 0 339 400 264 325 8.57e-17 81.6
MsaG000592 MtrunA17_Chr1g0184691 47.945 73 36 1 127 197 279 351 2.37e-17 83.6
MsaG000592 MtrunA17_Chr1g0184691 48.485 66 33 1 339 403 291 356 4.00e-16 79.7
MsaG000592 MtrunA17_Chr2g0294231 45.745 94 43 3 340 426 202 294 2.52e-17 83.6
MsaG000592 MtrunA17_Chr2g0294231 47.297 74 34 2 123 196 191 259 2.95e-17 83.6
MsaG000592 MtrunA17_Chr7g0228941 52.632 57 27 0 140 196 53 109 2.93e-17 78.2
MsaG000592 MtrunA17_Chr7g0228941 51.667 60 29 0 339 398 50 109 5.81e-16 74.3
MsaG000592 MtrunA17_Chr7g0263531 50.746 67 32 1 130 196 352 417 3.78e-17 83.6
MsaG000592 MtrunA17_Chr7g0263531 52.000 75 27 4 140 207 190 262 4.02e-15 77.4
MsaG000592 MtrunA17_Chr7g0263531 46.970 66 34 1 336 401 356 420 5.60e-15 77.0
MsaG000592 MtrunA17_Chr7g0263531 48.571 70 34 2 342 411 190 257 3.86e-14 74.3
MsaG000592 MtrunA17_Chr5g0432161 47.945 73 35 2 124 196 408 477 5.49e-17 84.0
MsaG000592 MtrunA17_Chr5g0432161 50.794 63 30 1 339 401 419 480 5.49e-17 84.0
MsaG000592 MtrunA17_Chr5g0432161 50.877 57 26 2 140 196 245 299 1.02e-12 70.5
MsaG000592 MtrunA17_Chr5g0432161 48.333 60 29 2 342 401 245 302 1.68e-11 66.6
MsaG000592 MtrunA17_Chr1g0188941 50.877 57 27 1 140 196 52 107 1.04e-16 76.3
MsaG000592 MtrunA17_Chr1g0188941 34.259 108 61 3 294 401 13 110 2.77e-15 72.0
MsaG000592 MtrunA17_Chr7g0218081 47.945 73 35 2 124 196 397 466 2.38e-16 81.6
MsaG000592 MtrunA17_Chr7g0218081 41.176 102 51 4 317 412 385 483 2.49e-16 81.6
MsaG000592 MtrunA17_Chr8g0379461 51.724 58 28 0 140 197 77 134 3.46e-16 78.2
MsaG000592 MtrunA17_Chr8g0379461 48.333 60 31 0 342 401 77 136 1.40e-14 73.6
MsaG000592 MtrunA17_Chr2g0289181 46.970 66 35 0 336 401 9 74 3.49e-16 77.8
MsaG000592 MtrunA17_Chr2g0289181 33.898 118 71 3 140 250 15 132 3.06e-15 75.1
MsaG000592 MtrunA17_Chr7g0238921 56.140 57 24 1 140 196 125 180 5.24e-16 79.0
MsaG000592 MtrunA17_Chr7g0238921 50.877 57 27 1 342 398 125 180 7.50e-13 69.3
MsaG000592 MtrunA17_Chr1g0150801 50.000 60 29 1 339 398 100 158 5.86e-16 75.5
MsaG000592 MtrunA17_Chr1g0150801 50.877 57 27 1 140 196 103 158 6.58e-16 75.5
MsaG000592 MtrunA17_Chr2g0284321 49.123 57 29 0 140 196 36 92 1.29e-15 75.9
MsaG000592 MtrunA17_Chr2g0284321 48.333 60 31 0 342 401 36 95 7.16e-15 73.9
MsaG000592 MtrunA17_Chr7g0224801 48.387 62 31 1 339 400 91 151 1.47e-15 74.7
MsaG000592 MtrunA17_Chr7g0224801 51.613 62 29 1 140 201 94 154 1.54e-15 74.7
MsaG000592 MtrunA17_Chr7g0249301 44.737 76 39 2 121 196 276 348 1.92e-15 78.2
MsaG000592 MtrunA17_Chr7g0249301 46.032 63 33 1 339 401 290 351 3.34e-14 74.3
MsaG000592 MtrunA17_Chr7g0249301 40.741 81 44 3 340 420 61 137 1.76e-11 65.9
MsaG000592 MtrunA17_Chr3g0129361 52.632 57 26 1 140 196 145 200 2.03e-15 75.5
MsaG000592 MtrunA17_Chr3g0129361 44.615 65 35 1 339 403 142 205 2.72e-14 72.0
MsaG000592 MtrunA17_Chr3g0139021 52.632 57 27 0 140 196 315 371 2.23e-15 78.2
MsaG000592 MtrunA17_Chr3g0139021 50.000 60 30 0 339 398 312 371 3.67e-14 74.3
MsaG000592 MtrunA17_Chr8g0383351 52.632 57 26 1 140 196 161 216 2.41e-15 75.5
MsaG000592 MtrunA17_Chr8g0383351 43.077 65 36 1 339 403 158 221 7.06e-14 71.2
MsaG000592 MtrunA17_Chr4g0071521 50.000 58 29 0 140 197 246 303 2.44e-15 77.0
MsaG000592 MtrunA17_Chr4g0071521 47.541 61 32 0 339 399 243 303 1.31e-13 71.6
MsaG000592 MtrunA17_Chr7g0243891 45.205 73 39 1 329 401 362 433 3.28e-15 78.2
MsaG000592 MtrunA17_Chr7g0243891 45.205 73 37 2 124 196 361 430 6.65e-15 77.4
MsaG000592 MtrunA17_Chr7g0243891 45.946 74 33 3 328 401 208 274 5.50e-11 65.1
MsaG000592 MtrunA17_Chr8g0335811 52.632 57 26 1 140 196 155 210 7.84e-15 73.9
MsaG000592 MtrunA17_Chr8g0335811 43.939 66 36 1 339 404 152 216 6.18e-14 71.2
MsaG000592 MtrunA17_Chr4g0068541 45.205 73 37 2 124 196 195 264 7.86e-15 76.6
MsaG000592 MtrunA17_Chr4g0068541 40.506 79 44 2 323 401 192 267 3.32e-13 71.2
MsaG000592 MtrunA17_Chr7g0249311 42.529 87 44 3 113 196 365 448 9.54e-15 77.0
MsaG000592 MtrunA17_Chr7g0249311 47.619 63 32 1 339 401 390 451 2.12e-14 75.9
MsaG000592 MtrunA17_Chr2g0319961 52.632 57 27 0 140 196 81 137 1.11e-14 73.9
MsaG000592 MtrunA17_Chr2g0319961 45.455 66 36 0 336 401 75 140 1.69e-13 70.5
MsaG000592 MtrunA17_Chr8g0386241 43.939 66 36 1 140 205 104 168 2.06e-14 71.6
MsaG000592 MtrunA17_Chr8g0386241 42.029 69 37 2 339 405 101 168 9.77e-13 66.6
MsaG000592 MtrunA17_Chr4g0024391 36.957 92 58 0 124 215 214 305 2.37e-14 75.5
MsaG000592 MtrunA17_Chr4g0024391 39.726 73 44 0 329 401 217 289 7.75e-13 70.5
MsaG000592 MtrunA17_Chr8g0387501 42.254 71 41 0 138 208 128 198 7.24e-14 72.0
MsaG000592 MtrunA17_Chr8g0387501 42.169 83 43 1 342 424 130 207 1.84e-12 67.8
MsaG000592 MtrunA17_Chr2g0293481 42.857 77 39 1 125 196 248 324 7.53e-14 73.6
MsaG000592 MtrunA17_Chr2g0293481 43.939 66 37 0 338 403 264 329 8.97e-13 70.5
MsaG000592 MtrunA17_Chr7g0270051 48.333 60 31 0 342 401 54 113 9.83e-14 71.2
MsaG000592 MtrunA17_Chr7g0270051 47.368 57 30 0 140 196 54 110 2.04e-13 70.5
MsaG000592 MtrunA17_Chr8g0348311 38.554 83 50 1 140 222 156 237 1.44e-13 72.0
MsaG000592 MtrunA17_Chr8g0348311 45.902 61 33 0 342 402 156 216 1.08e-12 69.3
MsaG000592 MtrunA17_Chr7g0248721 48.485 66 32 2 140 205 142 205 1.45e-13 70.1
MsaG000592 MtrunA17_Chr7g0248721 51.667 60 27 2 339 398 139 196 2.08e-13 69.7
MsaG000592 MtrunA17_Chr3g0129321 49.123 57 28 1 140 196 119 174 2.12e-13 69.3
MsaG000592 MtrunA17_Chr3g0129321 43.284 67 37 1 339 405 116 181 1.92e-12 66.2
MsaG000592 MtrunA17_Chr7g0248691 35.106 94 60 1 140 233 155 247 4.39e-13 70.5
MsaG000592 MtrunA17_Chr7g0248691 29.193 161 87 4 285 435 115 258 6.43e-13 69.7
MsaG000592 MtrunA17_Chr8g0383251 45.614 57 30 1 140 196 109 164 5.01e-13 67.8
MsaG000592 MtrunA17_Chr8g0383251 42.857 63 35 1 339 401 106 167 1.38e-12 66.2
MsaG000592 MtrunA17_Chr1g0202461 36.842 76 48 0 140 215 262 337 1.17e-12 69.7
MsaG000592 MtrunA17_Chr1g0202461 43.333 60 34 0 342 401 262 321 2.24e-11 65.5
MsaG000592 MtrunA17_Chr6g0485431 38.636 88 48 4 111 197 130 212 1.81e-12 68.9
MsaG000592 MtrunA17_Chr6g0485431 34.737 95 58 3 308 401 123 214 3.52e-12 67.8
MsaG000592 MtrunA17_Chr1g0189391 36.634 101 58 4 105 204 67 162 2.95e-12 67.8
MsaG000592 MtrunA17_Chr5g0432071 28.743 167 94 6 262 411 14 172 3.07e-12 65.9
MsaG000592 MtrunA17_Chr8g0387981 50.877 57 26 1 140 194 133 189 1.72e-11 65.9
MsaG000592 MtrunA17_Chr5g0447711 46.479 71 36 2 126 196 218 286 2.06e-11 65.1
MsaG000592 MtrunA17_Chr3g0126391 50.877 57 26 1 140 194 134 190 3.18e-11 64.7
MsaG000592 MtrunA17_Chr7g0275531 41.975 81 43 2 124 202 105 183 7.00e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG000592 AT1G80840.1 49.505 202 90 4 3 196 6 203 6.32e-53 181
MsaG000592 AT1G80840.1 36.842 285 137 6 234 482 22 299 8.42e-43 154
MsaG000592 AT4G31800.1 45.070 213 93 5 25 221 49 253 1.14e-44 159
MsaG000592 AT4G31800.1 49.351 154 70 2 327 480 162 307 1.95e-39 145
MsaG000592 AT2G25000.1 44.681 188 74 5 19 196 36 203 5.97e-42 151
MsaG000592 AT2G25000.1 37.008 254 111 8 252 484 45 270 7.82e-35 132
MsaG000592 AT2G25000.2 45.000 180 72 4 24 196 1 160 8.46e-42 149
MsaG000592 AT2G25000.2 36.614 254 112 8 252 484 2 227 1.69e-35 132
MsaG000592 AT2G25000.4 45.000 180 72 4 24 196 1 160 8.46e-42 149
MsaG000592 AT2G25000.4 36.614 254 112 8 252 484 2 227 1.69e-35 132
MsaG000592 AT2G25000.3 44.809 183 74 4 21 196 20 182 1.69e-41 149
MsaG000592 AT2G25000.3 37.008 254 111 8 252 484 24 249 5.75e-35 131
MsaG000592 AT4G31800.2 49.351 154 70 2 327 480 97 242 6.13e-40 145
MsaG000592 AT4G31800.2 62.500 112 36 2 111 221 82 188 2.76e-38 140
MsaG000592 AT2G37260.2 31.900 279 159 10 126 398 70 323 1.96e-31 124
MsaG000592 AT2G37260.2 32.215 149 90 5 58 196 176 323 2.22e-14 74.7
MsaG000592 AT2G37260.2 44.444 72 36 3 331 402 75 142 1.28e-11 66.6
MsaG000592 AT2G37260.3 31.900 279 159 10 126 398 72 325 2.10e-31 124
MsaG000592 AT2G37260.3 32.215 149 90 5 58 196 178 325 2.26e-14 74.7
MsaG000592 AT2G37260.3 44.444 72 36 3 331 402 77 144 1.30e-11 66.6
MsaG000592 AT4G31800.3 44.048 168 75 4 25 176 49 213 2.67e-31 121
MsaG000592 AT4G31800.3 75.000 52 13 0 327 378 162 213 1.36e-21 94.0
MsaG000592 AT2G37260.1 31.900 279 159 10 126 398 152 405 9.71e-31 124
MsaG000592 AT2G37260.1 32.215 149 90 5 58 196 258 405 3.26e-14 75.1
MsaG000592 AT2G37260.1 44.444 72 36 3 331 402 157 224 1.51e-11 66.6
MsaG000592 AT1G13960.2 31.522 276 138 11 140 401 77 315 1.67e-28 116
MsaG000592 AT1G13960.2 47.945 73 35 2 124 196 243 312 2.85e-17 84.0
MsaG000592 AT1G13960.2 43.210 81 35 4 321 401 65 134 7.63e-12 67.4
MsaG000592 AT4G26640.5 28.975 283 148 9 129 401 25 264 2.03e-27 114
MsaG000592 AT4G26640.6 28.975 283 148 9 129 401 25 264 2.03e-27 114
MsaG000592 AT4G26640.4 28.975 283 148 9 129 401 25 264 2.03e-27 114
MsaG000592 AT4G26640.3 28.975 283 148 9 129 401 25 264 2.03e-27 114
MsaG000592 AT2G30250.1 29.658 263 142 8 140 401 167 387 4.95e-27 112
MsaG000592 AT2G30250.1 45.205 73 37 2 124 196 315 384 1.16e-14 76.3
MsaG000592 AT2G30250.1 39.130 92 44 3 342 433 167 246 5.25e-11 64.7
MsaG000592 AT1G13960.1 31.884 276 137 12 140 401 230 468 5.59e-27 114
MsaG000592 AT1G13960.1 47.945 73 35 2 124 196 396 465 6.20e-17 84.0
MsaG000592 AT1G13960.1 43.210 81 35 4 321 401 218 287 9.56e-12 67.8
MsaG000592 AT4G26640.1 28.975 283 148 9 129 401 129 368 6.66e-27 114
MsaG000592 AT4G26640.2 28.975 283 148 9 129 401 201 440 1.10e-26 114
MsaG000592 AT4G26640.7 28.975 283 148 9 129 401 161 400 1.11e-26 113
MsaG000592 AT2G04880.1 27.654 358 222 14 140 482 112 447 4.86e-26 111
MsaG000592 AT2G04880.1 57.627 59 24 1 138 196 306 363 1.75e-17 85.5
MsaG000592 AT1G68150.1 42.105 114 64 1 288 401 184 295 4.04e-24 104
MsaG000592 AT1G68150.1 48.387 93 48 0 118 210 214 306 3.62e-22 98.6
MsaG000592 AT4G04450.2 47.191 89 47 0 329 417 186 274 4.40e-24 105
MsaG000592 AT4G04450.2 48.913 92 47 0 124 215 183 274 7.75e-23 101
MsaG000592 AT4G04450.1 47.191 89 47 0 329 417 280 368 1.20e-23 104
MsaG000592 AT4G04450.1 48.913 92 47 0 124 215 277 368 1.70e-22 100
MsaG000592 AT4G22070.4 56.164 73 32 0 329 401 285 357 2.90e-23 103
MsaG000592 AT4G22070.4 54.795 73 33 0 124 196 282 354 8.33e-22 99.0
MsaG000592 AT4G22070.3 56.164 73 32 0 329 401 285 357 2.90e-23 103
MsaG000592 AT4G22070.3 54.795 73 33 0 124 196 282 354 8.33e-22 99.0
MsaG000592 AT4G22070.2 56.164 73 32 0 329 401 285 357 2.90e-23 103
MsaG000592 AT4G22070.2 54.795 73 33 0 124 196 282 354 8.33e-22 99.0
MsaG000592 AT4G22070.1 56.164 73 32 0 329 401 285 357 2.90e-23 103
MsaG000592 AT4G22070.1 54.795 73 33 0 124 196 282 354 8.33e-22 99.0
MsaG000592 AT1G62300.1 56.579 76 31 1 326 401 299 372 3.92e-23 103
MsaG000592 AT1G62300.1 30.952 210 107 5 25 196 160 369 4.01e-22 100
MsaG000592 AT4G01720.1 33.503 197 98 4 28 196 105 296 1.03e-22 101
MsaG000592 AT4G01720.1 30.348 201 92 4 249 401 99 299 3.09e-21 97.1
MsaG000592 AT4G26440.1 30.392 306 144 14 140 416 179 444 1.05e-22 102
MsaG000592 AT4G26440.1 43.836 73 38 2 124 196 359 428 9.36e-13 70.9
MsaG000592 AT5G15130.2 58.065 62 26 0 340 401 184 245 1.57e-21 97.8
MsaG000592 AT5G15130.2 52.703 74 35 0 140 213 186 259 3.97e-21 96.7
MsaG000592 AT5G15130.1 58.065 62 26 0 340 401 226 287 1.67e-21 98.2
MsaG000592 AT5G15130.1 52.703 74 35 0 140 213 228 301 5.32e-21 96.7
MsaG000592 AT1G18860.1 57.576 66 28 0 336 401 234 299 2.40e-21 97.4
MsaG000592 AT1G18860.1 64.912 57 20 0 140 196 240 296 1.92e-20 94.7
MsaG000592 AT1G69810.2 32.911 158 102 3 256 411 61 216 1.73e-20 92.8
MsaG000592 AT1G69810.2 50.000 74 36 1 124 196 130 203 1.39e-16 81.3
MsaG000592 AT1G69810.1 32.911 158 102 3 256 411 119 274 2.59e-20 93.2
MsaG000592 AT1G69810.1 50.000 74 36 1 124 196 188 261 1.90e-16 81.6
MsaG000592 AT4G30935.1 26.909 275 155 8 140 410 169 401 3.97e-20 93.6
MsaG000592 AT1G64000.1 53.030 66 30 1 140 205 115 179 1.66e-18 84.0
MsaG000592 AT1G64000.1 45.205 73 37 2 326 398 101 170 2.06e-16 78.2
MsaG000592 AT5G41570.1 53.030 66 30 1 140 205 99 163 6.26e-18 82.0
MsaG000592 AT5G41570.1 41.000 100 49 4 299 398 65 154 1.33e-16 78.2
MsaG000592 AT4G18170.1 53.333 60 27 1 137 196 170 228 6.85e-18 85.1
MsaG000592 AT4G18170.1 45.161 62 33 1 340 401 171 231 3.18e-15 77.0
MsaG000592 AT1G29860.1 53.333 60 27 1 137 196 134 192 6.91e-18 84.3
MsaG000592 AT1G29860.1 48.387 62 31 1 340 401 135 195 6.67e-16 78.6
MsaG000592 AT2G04880.2 32.468 154 83 5 339 482 281 423 7.70e-18 86.3
MsaG000592 AT2G04880.2 57.627 59 24 1 138 196 282 339 1.54e-17 85.5
MsaG000592 AT2G47260.1 55.000 60 26 1 137 196 172 230 1.72e-17 84.0
MsaG000592 AT2G47260.1 44.578 83 45 1 340 422 173 254 3.38e-15 77.4
MsaG000592 AT5G26170.1 50.877 57 27 1 140 196 114 169 1.82e-17 80.5
MsaG000592 AT5G26170.1 45.000 60 32 1 339 398 111 169 9.89e-15 72.8
MsaG000592 AT5G07100.2 38.614 101 58 3 96 196 101 197 2.59e-17 81.3
MsaG000592 AT5G07100.2 42.029 69 39 1 339 407 139 206 1.11e-14 73.6
MsaG000592 AT5G07100.2 45.070 71 38 1 126 196 11 80 7.15e-13 68.2
MsaG000592 AT5G07100.2 48.571 70 34 2 342 411 25 92 3.34e-12 66.2
MsaG000592 AT5G07100.4 38.614 101 58 3 96 196 101 197 2.59e-17 81.3
MsaG000592 AT5G07100.4 42.029 69 39 1 339 407 139 206 1.11e-14 73.6
MsaG000592 AT5G07100.4 45.070 71 38 1 126 196 11 80 7.15e-13 68.2
MsaG000592 AT5G07100.4 48.571 70 34 2 342 411 25 92 3.34e-12 66.2
MsaG000592 AT5G07100.5 38.614 101 58 3 96 196 101 197 2.59e-17 81.3
MsaG000592 AT5G07100.5 42.029 69 39 1 339 407 139 206 1.11e-14 73.6
MsaG000592 AT5G07100.5 45.070 71 38 1 126 196 11 80 7.15e-13 68.2
MsaG000592 AT5G07100.5 48.571 70 34 2 342 411 25 92 3.34e-12 66.2
MsaG000592 AT5G07100.3 38.614 101 58 3 96 196 101 197 2.59e-17 81.3
MsaG000592 AT5G07100.3 42.029 69 39 1 339 407 139 206 1.11e-14 73.6
MsaG000592 AT5G07100.3 45.070 71 38 1 126 196 11 80 7.15e-13 68.2
MsaG000592 AT5G07100.3 48.571 70 34 2 342 411 25 92 3.34e-12 66.2
MsaG000592 AT3G04670.1 39.623 106 59 1 293 398 219 319 2.99e-17 83.2
MsaG000592 AT3G04670.1 41.860 86 42 2 127 210 248 327 1.28e-15 78.6
MsaG000592 AT5G46350.1 47.222 72 33 2 125 196 173 239 5.04e-17 82.4
MsaG000592 AT5G46350.1 43.548 62 34 1 340 401 182 242 3.92e-14 73.9
MsaG000592 AT2G03340.1 47.945 73 35 2 124 196 402 471 6.29e-17 84.0
MsaG000592 AT2G03340.1 47.143 70 36 1 332 401 406 474 7.16e-16 80.5
MsaG000592 AT2G03340.1 37.736 106 55 5 305 401 205 308 1.10e-13 73.9
MsaG000592 AT2G03340.1 50.877 57 26 2 140 196 251 305 2.40e-12 69.7
MsaG000592 AT4G31550.1 44.928 69 38 0 140 208 247 315 1.03e-16 81.6
MsaG000592 AT4G31550.1 48.333 60 31 0 339 398 244 303 6.47e-15 76.3
MsaG000592 AT4G31550.2 44.928 69 38 0 140 208 246 314 1.05e-16 81.6
MsaG000592 AT4G31550.2 48.333 60 31 0 339 398 243 302 6.46e-15 76.3
MsaG000592 AT5G28650.1 37.168 113 66 1 286 398 212 319 1.07e-16 81.6
MsaG000592 AT5G28650.1 44.186 86 40 2 127 210 248 327 2.62e-16 80.5
MsaG000592 AT5G07100.1 38.614 101 58 3 96 196 194 290 1.08e-16 81.3
MsaG000592 AT5G07100.1 44.444 63 34 1 339 401 232 293 2.29e-14 74.3
MsaG000592 AT5G07100.1 42.308 78 44 1 126 203 104 180 2.32e-12 68.2
MsaG000592 AT5G07100.1 48.571 70 34 2 342 411 118 185 9.86e-12 66.6
MsaG000592 AT5G49520.1 54.386 57 25 1 140 196 222 277 1.14e-16 82.4
MsaG000592 AT5G49520.1 46.774 62 32 1 340 401 220 280 1.19e-14 76.3
MsaG000592 AT2G38470.1 41.176 85 40 2 339 423 360 434 1.27e-16 82.8
MsaG000592 AT2G38470.1 45.205 73 37 2 124 196 349 418 2.59e-15 79.0
MsaG000592 AT2G38470.1 50.877 57 26 2 140 196 185 239 2.99e-12 69.3
MsaG000592 AT2G38470.1 40.506 79 37 3 331 401 166 242 9.32e-12 67.8
MsaG000592 AT1G69310.4 54.386 57 25 1 140 196 148 203 1.64e-16 80.5
MsaG000592 AT1G69310.4 46.154 65 31 2 340 401 146 209 8.64e-14 72.4
MsaG000592 AT1G69310.2 54.386 57 25 1 140 196 148 203 1.64e-16 80.5
MsaG000592 AT1G69310.2 46.154 65 31 2 340 401 146 209 8.64e-14 72.4
MsaG000592 AT1G69310.1 54.386 57 25 1 140 196 148 203 1.64e-16 80.5
MsaG000592 AT1G69310.1 46.154 65 31 2 340 401 146 209 8.64e-14 72.4
MsaG000592 AT2G30590.1 52.632 57 27 0 140 196 314 370 2.23e-16 81.3
MsaG000592 AT2G30590.1 50.000 60 30 0 339 398 311 370 1.38e-15 79.0
MsaG000592 AT3G62340.1 51.562 64 30 1 133 196 112 174 2.24e-16 79.7
MsaG000592 AT3G62340.1 39.796 98 53 2 336 428 113 209 1.32e-15 77.4
MsaG000592 AT5G13080.1 53.226 62 28 1 140 201 68 128 2.36e-16 76.6
MsaG000592 AT5G13080.1 50.000 60 29 1 339 398 65 123 7.71e-16 75.1
MsaG000592 AT2G23320.1 49.123 57 29 0 140 196 241 297 2.51e-16 80.5
MsaG000592 AT2G23320.1 49.153 59 30 0 342 400 241 299 1.10e-15 78.6
MsaG000592 AT5G56270.1 50.794 63 30 1 339 401 485 546 2.64e-16 82.4
MsaG000592 AT5G56270.1 47.945 73 35 2 124 196 474 543 4.72e-16 81.6
MsaG000592 AT3G01080.1 46.575 73 36 2 124 196 293 362 5.76e-16 80.5
MsaG000592 AT3G01080.1 45.714 70 37 1 332 401 297 365 2.52e-15 78.6
MsaG000592 AT1G29280.1 50.877 57 28 0 140 196 75 131 6.20e-16 78.2
MsaG000592 AT1G29280.1 46.667 60 32 0 342 401 75 134 4.86e-14 72.8
MsaG000592 AT3G01080.2 46.575 73 36 2 124 196 331 400 6.52e-16 80.5
MsaG000592 AT3G01080.2 45.714 70 37 1 332 401 335 403 2.88e-15 78.6
MsaG000592 AT2G24570.1 50.877 57 28 0 140 196 244 300 1.23e-15 78.2
MsaG000592 AT2G24570.1 48.333 60 31 0 339 398 241 300 5.31e-15 76.6
MsaG000592 AT4G24240.1 46.552 58 31 0 140 197 282 339 3.90e-15 77.4
MsaG000592 AT4G24240.1 45.161 62 34 0 339 400 279 340 7.26e-15 76.3
MsaG000592 AT2G44745.1 52.632 57 26 1 140 196 146 201 5.47e-15 74.7
MsaG000592 AT2G44745.1 43.478 69 38 1 339 407 143 210 3.06e-14 72.4
MsaG000592 AT2G46130.1 39.560 91 46 3 308 398 5 86 1.40e-14 70.5
MsaG000592 AT2G46130.1 50.877 57 27 1 140 196 31 86 1.86e-13 67.0
MsaG000592 AT3G01970.1 49.180 61 30 1 140 200 66 125 2.11e-14 70.9
MsaG000592 AT3G01970.1 43.421 76 40 2 332 405 56 130 3.08e-14 70.5
MsaG000592 AT1G55600.1 50.000 62 30 1 140 201 308 368 3.83e-14 75.1
MsaG000592 AT1G55600.1 51.667 60 28 1 342 401 308 366 6.89e-14 74.3
MsaG000592 AT4G39410.1 50.877 57 27 1 140 196 224 279 4.11e-14 73.6
MsaG000592 AT4G39410.1 43.077 65 36 1 339 403 221 284 4.20e-13 70.5
MsaG000592 AT2G21900.1 38.298 94 52 3 126 218 95 183 4.31e-14 71.6
MsaG000592 AT2G21900.1 40.260 77 45 1 325 401 93 168 8.25e-14 70.9
MsaG000592 AT2G34830.1 47.692 65 34 0 132 196 208 272 5.78e-14 74.3
MsaG000592 AT2G34830.1 43.939 66 37 0 338 403 212 277 1.21e-12 70.1
MsaG000592 AT2G34830.2 47.692 65 34 0 132 196 217 281 6.62e-14 73.9
MsaG000592 AT2G34830.2 43.939 66 37 0 338 403 221 286 1.39e-12 70.1
MsaG000592 AT1G30650.1 47.692 65 34 0 132 196 210 274 1.08e-13 73.6
MsaG000592 AT1G30650.1 45.312 64 35 0 338 401 214 277 2.47e-12 69.3
MsaG000592 AT3G58710.1 49.123 57 29 0 140 196 72 128 1.33e-13 71.6
MsaG000592 AT3G58710.1 47.619 63 33 0 342 404 72 134 6.65e-13 69.3
MsaG000592 AT3G58710.2 49.123 57 29 0 140 196 71 127 1.34e-13 71.6
MsaG000592 AT3G58710.2 47.619 63 33 0 342 404 71 133 6.57e-13 69.3
MsaG000592 AT4G12020.11 28.755 233 119 11 138 361 467 661 1.74e-13 73.9
MsaG000592 AT4G12020.6 28.755 233 119 11 138 361 467 661 1.93e-13 73.9
MsaG000592 AT4G12020.8 28.755 233 119 11 138 361 467 661 1.93e-13 73.9
MsaG000592 AT4G12020.3 28.755 233 119 11 138 361 467 661 2.04e-13 73.9
MsaG000592 AT4G12020.10 28.755 233 119 11 138 361 467 661 2.13e-13 73.6
MsaG000592 AT4G12020.4 28.755 233 119 11 138 361 467 661 2.31e-13 73.6
MsaG000592 AT5G64810.1 37.805 82 46 3 116 196 89 166 2.36e-13 69.3
MsaG000592 AT5G64810.1 41.667 60 34 1 339 398 108 166 1.70e-12 66.6
MsaG000592 AT4G12020.7 28.755 233 119 11 138 361 467 661 2.37e-13 73.6
MsaG000592 AT4G12020.2 28.755 233 119 11 138 361 467 661 2.37e-13 73.6
MsaG000592 AT4G12020.1 28.755 233 119 11 138 361 467 661 2.41e-13 73.6
MsaG000592 AT4G12020.9 28.755 233 119 11 138 361 467 661 2.41e-13 73.6
MsaG000592 AT4G12020.5 28.755 233 119 11 138 361 400 594 2.75e-13 73.2
MsaG000592 AT5G52830.1 43.478 69 39 0 140 208 166 234 3.64e-13 71.2
MsaG000592 AT5G52830.1 46.667 60 32 0 342 401 166 225 2.43e-11 65.5
MsaG000592 AT5G43290.1 40.789 76 43 2 121 196 97 170 4.92e-13 69.7
MsaG000592 AT5G43290.1 43.077 65 36 1 334 398 107 170 2.11e-12 68.2
MsaG000592 AT4G01250.1 45.614 57 31 0 140 196 129 185 6.15e-13 70.1
MsaG000592 AT4G01250.1 41.176 85 49 1 342 425 129 213 4.41e-12 67.4
MsaG000592 AT5G45050.4 34.951 103 64 1 94 196 999 1098 1.75e-12 70.5
MsaG000592 AT5G45050.4 45.000 60 33 0 342 401 1042 1101 8.30e-11 65.5
MsaG000592 AT5G45050.2 34.951 103 64 1 94 196 1110 1209 1.78e-12 70.5
MsaG000592 AT5G45050.2 45.000 60 33 0 342 401 1153 1212 9.15e-11 65.1
MsaG000592 AT5G45050.1 34.951 103 64 1 94 196 1138 1237 1.88e-12 70.5
MsaG000592 AT5G45050.1 45.000 60 33 0 342 401 1181 1240 8.88e-11 65.1
MsaG000592 AT1G69310.3 50.877 57 23 2 140 196 148 199 2.79e-12 67.8
MsaG000592 AT4G23550.1 42.373 59 34 0 138 196 139 197 1.07e-11 66.2
MsaG000592 AT4G23550.1 41.270 63 37 0 339 401 138 200 3.03e-11 65.1
MsaG000592 AT2G46400.1 40.698 86 46 3 111 194 79 161 1.43e-11 65.9

Find 79 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATTGCTGGATAGATGATTT+TGG 0.173303 1:-7791758 None:intergenic
GTCTTCACCTAAGGCTTATA+AGG 0.247602 1:+7790729 MsaT000592.1:CDS
ATAAGTTCAAATCATCAAAT+TGG 0.248317 1:+7803502 MsaT000592.1:CDS
CATACCAAACTTTCATCATT+AGG 0.285634 1:-7803613 None:intergenic
TTAGAGATTGATGAACCTTT+AGG 0.306541 1:-7804190 None:intergenic
CTTCTCCTAGAGCTTACTTT+AGG 0.314347 1:+7803884 MsaT000592.1:CDS
TGAAGTCAGGATCTTTGATT+AGG 0.319072 1:-7804330 None:intergenic
AAATCTCGATTTGAATCTTT+CGG 0.326816 1:+7804417 MsaT000592.1:CDS
CAGAGTGAAGAAGCTCCTTT+AGG 0.328370 1:+7791665 MsaT000592.1:CDS
GGATATCAATGGAGGAAATA+TGG 0.328462 1:+7790932 MsaT000592.1:CDS
CTCACAAAGTCTAGTATTTG+TGG 0.333230 1:-7804248 None:intergenic
AATATGTTTGGTAATGTTAG+AGG 0.347609 1:+7790628 MsaT000592.1:CDS
TCAACCTAATGATGAAAGTT+TGG 0.350703 1:+7803609 MsaT000592.1:CDS
TTGTGAACAGGACGAAGTTT+TGG 0.359854 1:+7790432 MsaT000592.1:intron
GGCTATCAATGGAGGAAGTA+TGG 0.366288 1:+7803838 MsaT000592.1:CDS
TGGAACATTATCAAGCTTCA+TGG 0.367214 1:-7791738 None:intergenic
CCTCTCCTAGAGCTTACTTT+AGG 0.371319 1:+7790978 MsaT000592.1:CDS
TCTAGGAGAAGCATTGTCTT+TGG 0.371896 1:-7803872 None:intergenic
TTGTATACGAACCTTGAGTA+TGG 0.372911 1:-7789777 None:intergenic
TCTTTGTCATTCAATGTTGT+TGG 0.386703 1:-7804223 None:intergenic
GATGGTTTGAATGACTCATT+AGG 0.404082 1:-7804157 None:intergenic
GAAAGTTGCATCAATATGTT+TGG 0.406359 1:+7790616 MsaT000592.1:CDS
TCATCTTCAAGAAATCAAAA+AGG 0.410845 1:+7803462 MsaT000592.1:CDS
TATGTTGCAACTAGTATAGT+AGG 0.431061 1:-7791587 None:intergenic
GAAGTCAGGATCTTTGATTA+GGG 0.432423 1:-7804329 None:intergenic
TGGAAGGAACATTAACGTTA+AGG 0.438901 1:-7789757 None:intergenic
TAAGTTCAAATCATCAAATT+GGG 0.447315 1:+7803503 MsaT000592.1:CDS
ATGAAGAATCATTAATCAAA+AGG 0.454669 1:+7790692 MsaT000592.1:CDS
ATCCTTGTTGCAACATATGA+TGG 0.459740 1:+7804115 MsaT000592.1:CDS
GCTAATGCTGCAGTGAAGTC+AGG 0.465446 1:-7804343 None:intergenic
ATGGAGGAAGTATGGTCAAA+AGG 0.476669 1:+7803846 MsaT000592.1:CDS
ACAAGAACCTTATAAGCCTT+AGG 0.486641 1:-7790736 None:intergenic
CCATCTTCATCCACACCTAA+AGG 0.490427 1:+7804175 MsaT000592.1:CDS
CATTAATCAAAAGGCCATGT+AGG 0.493040 1:+7790701 MsaT000592.1:CDS
AATATATAGATAATAAAAGA+TGG 0.494453 1:+7803817 MsaT000592.1:intron
AACTGGGCAGCTTGGAGCAT+AGG 0.506437 1:-7791005 None:intergenic
TGCGGGGCAACTAGGAGCCA+TGG 0.508480 1:-7803911 None:intergenic
ACATTATCAAGCTTCATGGT+TGG 0.511345 1:-7791734 None:intergenic
AGCTTACTTTAGGTGCTCCA+TGG 0.512350 1:+7803894 MsaT000592.1:CDS
GAGAATGTCATGCAACAGTT+TGG 0.514761 1:+7804268 MsaT000592.1:CDS
CTTATGTTCTTGATCAGTGA+CGG 0.524464 1:-7804383 None:intergenic
TAGGGATATGTCTTCACCTA+AGG 0.525286 1:+7790720 MsaT000592.1:CDS
TAATGTTCCTTCCATACTCA+AGG 0.525940 1:+7789766 MsaT000592.1:CDS
GTCATGCAACAGTTTGGCTA+TGG 0.529941 1:+7804274 MsaT000592.1:CDS
TAATAAAAGATGGCTATCAA+TGG 0.531094 1:+7803827 MsaT000592.1:CDS
CCTTTAGGTGTGGATGAAGA+TGG 0.531585 1:-7804175 None:intergenic
TTTCAGCTTTCTCATGACCA+TGG 0.536101 1:-7791625 None:intergenic
GAGCACCTAAAGTAAGCTCT+AGG 0.538868 1:-7790983 None:intergenic
ATTAATCAAAAGGCCATGTA+GGG 0.538909 1:+7790702 MsaT000592.1:CDS
CCTAAAGTAAGCTCTAGGAG+AGG 0.548395 1:-7790978 None:intergenic
CTAAAGGAGCTTCTTCACTC+TGG 0.548870 1:-7791664 None:intergenic
GTAACATGAACTGAACCTAA+AGG 0.560432 1:-7791680 None:intergenic
GAGCACCTAAAGTAAGCTCT+AGG 0.566462 1:-7803889 None:intergenic
GTCTTAGTTCTGAGAACAAG+AGG 0.567530 1:+7790470 MsaT000592.1:CDS
CTAAAGTAAGCTCTAGGAGA+GGG 0.569732 1:-7790977 None:intergenic
GTTCGTACAAAGACTTGTAG+TGG 0.571338 1:-7803586 None:intergenic
TTGTGGTATAAAGTATGTGA+TGG 0.581181 1:+7790907 MsaT000592.1:intron
TGCAACAGTTTGGCTATGGA+AGG 0.583957 1:+7804278 MsaT000592.1:CDS
ATGGAGGAAATATGGTCAGA+AGG 0.585738 1:+7790940 MsaT000592.1:CDS
CTCCATCATATGTTGCAACA+AGG 0.587646 1:-7804117 None:intergenic
AGAGTTACAACAAGTGAGAG+AGG 0.590536 1:+7803378 MsaT000592.1:CDS
GGTATAAAGTATGTGATGGA+TGG 0.592987 1:+7790911 MsaT000592.1:intron
ATGTGATGGATGGATATCAA+TGG 0.593080 1:+7790921 MsaT000592.1:CDS
ATGTTGCAACTAGTATAGTA+GGG 0.601976 1:-7791586 None:intergenic
TGCAATGGAATCAACTTGTG+TGG 0.619908 1:+7789721 None:intergenic
TCTCGATTTGAATCTTTCGG+AGG 0.620338 1:+7804420 MsaT000592.1:CDS
TAAAAGATGGCTATCAATGG+AGG 0.624488 1:+7803830 MsaT000592.1:CDS
GATTGATGAACCTTTAGGTG+TGG 0.626271 1:-7804185 None:intergenic
ATACGAACCTTGAGTATGGA+AGG 0.630843 1:-7789773 None:intergenic
GGTGAAGACATATCCCTACA+TGG 0.630918 1:-7790715 None:intergenic
GTTCTTTGAATAATTTGTTG+AGG 0.631715 1:-7791707 None:intergenic
TAACATGTGTGAGAACTATG+AGG 0.644714 1:+7790510 MsaT000592.1:CDS
TAAAGTAAGCTCTAGGAGAG+GGG 0.664718 1:-7790976 None:intergenic
TGATGGATGGATATCAATGG+AGG 0.669535 1:+7790924 MsaT000592.1:CDS
ATACTAGTTGCAACATACGA+AGG 0.673327 1:+7791593 MsaT000592.1:CDS
TACGAAGGAGAGCACAACCA+TGG 0.683428 1:+7791608 MsaT000592.1:CDS
TATGATGGAGAGCACAACCA+TGG 0.692151 1:+7804130 MsaT000592.1:CDS
ATGACTCATTAGGAACACCA+TGG 0.708357 1:-7804147 None:intergenic
GATCAAGAACATAAGCGACA+AGG 0.725331 1:+7804391 MsaT000592.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 7789725 7804447 7789725 ID=MsaG000592
Chr1 mRNA 7789725 7804447 7789725 ID=MsaT000592.1;Parent=MsaG000592
Chr1 exon 7789725 7789787 7789725 ID=MsaT000592.1.exon1;Parent=MsaT000592.1
Chr1 CDS 7789725 7789787 7789725 ID=cds.MsaT000592.1;Parent=MsaT000592.1
Chr1 exon 7790442 7790786 7790442 ID=MsaT000592.1.exon2;Parent=MsaT000592.1
Chr1 CDS 7790442 7790786 7790442 ID=cds.MsaT000592.1;Parent=MsaT000592.1
Chr1 exon 7790920 7791036 7790920 ID=MsaT000592.1.exon3;Parent=MsaT000592.1
Chr1 CDS 7790920 7791036 7790920 ID=cds.MsaT000592.1;Parent=MsaT000592.1
Chr1 exon 7791566 7791784 7791566 ID=MsaT000592.1.exon4;Parent=MsaT000592.1
Chr1 CDS 7791566 7791784 7791566 ID=cds.MsaT000592.1;Parent=MsaT000592.1
Chr1 exon 7803361 7803630 7803361 ID=MsaT000592.1.exon5;Parent=MsaT000592.1
Chr1 CDS 7803361 7803630 7803361 ID=cds.MsaT000592.1;Parent=MsaT000592.1
Chr1 exon 7803826 7803942 7803826 ID=MsaT000592.1.exon6;Parent=MsaT000592.1
Chr1 CDS 7803826 7803942 7803826 ID=cds.MsaT000592.1;Parent=MsaT000592.1
Chr1 exon 7804088 7804447 7804088 ID=MsaT000592.1.exon7;Parent=MsaT000592.1
Chr1 CDS 7804088 7804447 7804088 ID=cds.MsaT000592.1;Parent=MsaT000592.1
Gene Sequence

>MsaT000592.1

ATGGAATCAACTTGTGTGGATACTTCACTTAACCTTAACGTTAATGTTCCTTCCATACTCAAGGACGAAGTTTTGGTTGAAGAGTTACATCGTCTTAGTTCTGAGAACAAGAGGCTAAATGAAACATTGACTAACATGTGTGAGAACTATGAGGCTATGCAAAAGCAATTGAATCAATTGATGAATCAAAATTTTGAAAACCAAACACAACAATCAAAGAAAAGAAAAGCTGAGAGTGAAAGTTGCATCAATATGTTTGGTAATGTTAGAGGCATTAATATTATCAATAATAATGAGTGCAGCACTGTTACTGATGAAGAATCATTAATCAAAAGGCCATGTAGGGATATGTCTTCACCTAAGGCTTATAAGGTTCTTGTGAAGACAGAAGCATCTAGTAATAGCTTATATGTGATGGATGGATATCAATGGAGGAAATATGGTCAGAAGGTTACTAGAGATAACCCCTCTCCTAGAGCTTACTTTAGGTGCTCCTATGCTCCAAGCTGCCCAGTTAAAAAGAAGGTGCAAAAAAGTGTAGAAGACCCTACTATACTAGTTGCAACATACGAAGGAGAGCACAACCATGGTCATGAGAAAGCTGAAAAATCAATGATATCAAGCCAGAGTGAAGAAGCTCCTTTAGGTTCAGTTCATGTTACTTCACCTCAACAAATTATTCAAAGAACATGTCCAACCATGAAGCTTGATAATGTTCCAAAATCATCTATCCAGCAATTTTTGGTGGAAACTCTTGAATTAGAGTTACAACAAGTGAGAGAGGAGAACAATACTCTAAGATTCATGCTTGAAGTTATGAGTATCAAATGCACAAAGCTTGAATCTCATCTTCAAGAAATCAAAAAGGAAGAACATAGGGGAATCATAAGTTCAAATCATCAAATTGGGTCAATACCTAACATTGATTCAAGCAAAAGAGCAAGACTAGAGATTCCCACAGCACAAAAGCCACTACAAGTCTTTGTACGAACTCAACCTAATGATGAAAGTTTGATAATAAAAGATGGCTATCAATGGAGGAAGTATGGTCAAAAGGTTACCAAAGACAATGCTTCTCCTAGAGCTTACTTTAGGTGCTCCATGGCTCCTAGTTGCCCCGCAAAAAAGAAGGTGCAAAAATGCATAAATGATAGGTCTATCCTTGTTGCAACATATGATGGAGAGCACAACCATGGTGTTCCTAATGAGTCATTCAAACCATCTTCATCCACACCTAAAGGTTCATCAATCTCTAATAATAAATTACCAACAACATTGAATGACAAAGAAGCCACAAATACTAGACTTTGTGAGAATGTCATGCAACAGTTTGGCTATGGAAGGCACATTAAAATTGAAGAATATGCAAGTTCCCTAATCAAAGATCCTGACTTCACTGCAGCATTAGCTGAAGCAGTTGCTCGAACCGTCACTGATCAAGAACATAAGCGACAAGGTCTAAATCTCGATTTGAATCTTTCGGAGGAGTGA
Protein sequence

>MsaT000592.1

MESTCVDTSLNLNVNVPSILKDEVLVEELHRLSSENKRLNETLTNMCENYEAMQKQLNQLMNQNFENQTQQSKKRKAESESCINMFGNVRGINIINNNECSTVTDEESLIKRPCRDMSSPKAYKVLVKTEASSNSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSYAPSCPVKKKVQKSVEDPTILVATYEGEHNHGHEKAEKSMISSQSEEAPLGSVHVTSPQQIIQRTCPTMKLDNVPKSSIQQFLVETLELELQQVREENNTLRFMLEVMSIKCTKLESHLQEIKKEEHRGIISSNHQIGSIPNIDSSKRARLEIPTAQKPLQVFVRTQPNDESLIIKDGYQWRKYGQKVTKDNASPRAYFRCSMAPSCPAKKKVQKCINDRSILVATYDGEHNHGVPNESFKPSSSTPKGSSISNNKLPTTLNDKEATNTRLCENVMQQFGYGRHIKIEEYASSLIKDPDFTAALAEAVARTVTDQEHKRQGLNLDLNLSEE*