AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa ssp. caerulea / MsaG000631

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG000631 MtrunA17_Chr3g0137091 69.677 1362 348 16 1 1307 1 1352 0.0 1863
MsaG000631 MtrunA17_Chr1g0149861 82.342 555 58 4 712 1231 1 550 0.0 902
MsaG000631 MtrunA17_Chr1g0149871 87.382 317 35 2 50 362 8 323 0.0 577
MsaG000631 MtrunA17_Chr5g0442141 43.286 767 354 23 129 851 456 1185 5.36e-175 565
MsaG000631 MtrunA17_Chr3g0095091 35.897 1053 541 31 110 1099 390 1371 2.32e-172 557
MsaG000631 MtrunA17_Chr4g0052341 40.606 825 379 16 129 875 604 1395 6.48e-172 565
MsaG000631 MtrunA17_Chr2g0286291 43.879 531 255 8 281 802 189 685 2.93e-123 409
MsaG000631 MtrunA17_Chr5g0403921 40.102 591 292 13 246 804 148 708 2.25e-116 381
MsaG000631 MtrunA17_Chr5g0394201 39.709 549 274 9 261 780 333 853 1.79e-113 382
MsaG000631 MtrunA17_Chr1g0205891 40.182 550 273 10 260 780 345 867 2.21e-112 379
MsaG000631 MtrunA17_Chr7g0232121 36.303 595 310 14 281 828 37 609 9.05e-102 345
MsaG000631 MtrunA17_Chr4g0066651 40.837 502 236 10 275 747 981 1450 1.14e-101 358
MsaG000631 MtrunA17_Chr7g0231521 34.087 575 267 14 283 828 39 530 4.93e-89 307
MsaG000631 MtrunA17_Chr8g0348721 36.511 493 241 7 275 729 979 1437 4.76e-83 300
MsaG000631 MtrunA17_Chr1g0163011 35.519 549 252 14 283 754 195 718 1.86e-82 286
MsaG000631 MtrunA17_Chr7g0248031 37.090 488 246 7 275 729 986 1445 8.72e-80 290
MsaG000631 MtrunA17_Chr1g0183681 34.686 542 296 14 267 766 366 891 1.85e-78 283
MsaG000631 MtrunA17_Chr4g0017211 30.957 575 296 13 283 788 1450 1992 8.62e-66 246
MsaG000631 MtrunA17_Chr8g0384531 31.489 524 258 15 283 739 384 873 1.58e-60 227
MsaG000631 MtrunA17_Chr7g0257101 38.138 333 169 9 274 587 570 884 5.14e-56 214
MsaG000631 MtrunA17_Chr7g0257101 48.718 156 79 1 599 754 1186 1340 4.43e-38 156
MsaG000631 MtrunA17_Chr1g0175191 38.509 322 161 5 277 585 515 812 2.55e-54 209
MsaG000631 MtrunA17_Chr1g0175191 50.000 156 77 1 605 760 1062 1216 2.18e-38 157
MsaG000631 MtrunA17_Chr5g0393461 28.000 525 303 12 283 753 184 687 2.11e-53 203
MsaG000631 MtrunA17_Chr7g0264371 25.631 792 455 27 54 791 49 760 1.68e-49 193
MsaG000631 MtrunA17_Chr4g0069451 26.778 478 299 14 282 747 173 611 1.50e-34 142
MsaG000631 MtrunA17_Chr2g0296421 25.743 505 324 14 280 749 508 996 6.61e-31 132
MsaG000631 MtrunA17_Chr4g0040301 37.968 187 110 2 602 783 377 562 3.64e-30 129
MsaG000631 MtrunA17_Chr4g0040301 29.851 268 132 7 311 549 18 258 1.74e-23 107
MsaG000631 MtrunA17_Chr8g0352361 24.864 551 351 18 226 737 309 835 5.08e-29 125
MsaG000631 MtrunA17_Chr7g0233021 23.792 559 327 16 282 760 654 1193 8.64e-29 125
MsaG000631 MtrunA17_Chr7g0232971 25.953 551 277 20 283 737 720 1235 9.70e-29 125
MsaG000631 MtrunA17_Chr7g0233031 25.042 591 307 21 282 772 674 1228 9.72e-29 125
MsaG000631 MtrunA17_Chr1g0190381 30.769 364 168 11 490 776 18 374 3.72e-27 117
MsaG000631 MtrunA17_Chr7g0225791 23.689 553 334 16 283 764 716 1251 5.09e-26 116
MsaG000631 MtrunA17_Chr4g0047081 24.205 566 309 20 282 760 665 1197 2.06e-24 111
MsaG000631 MtrunA17_Chr1g0191141 25.562 489 304 13 305 737 557 1041 1.46e-23 108
MsaG000631 MtrunA17_Chr7g0224051 25.813 492 300 17 305 737 570 1055 3.06e-23 107
MsaG000631 MtrunA17_Chr7g0233001 22.954 562 306 21 319 807 1 508 1.63e-22 103
MsaG000631 MtrunA17_Chr3g0114161 25.046 547 328 22 260 737 653 1186 2.92e-22 104
MsaG000631 MtrunA17_Chr2g0320751 33.529 170 110 3 598 766 844 1011 4.34e-22 103
MsaG000631 MtrunA17_Chr2g0320751 24.727 275 156 8 333 583 479 726 3.67e-18 90.9
MsaG000631 MtrunA17_Chr1g0168031 34.694 147 95 1 600 746 982 1127 1.19e-20 99.0
MsaG000631 MtrunA17_Chr1g0168031 25.228 329 169 10 305 583 536 837 2.56e-19 94.7
MsaG000631 MtrunA17_Chr5g0437621 24.739 574 338 21 282 771 718 1281 2.84e-20 97.8
MsaG000631 MtrunA17_Chr6g0457751 97.368 38 1 0 332 369 15 52 3.62e-20 85.5
MsaG000631 MtrunA17_Chr2g0281601 33.333 153 100 2 621 772 1148 1299 6.08e-20 97.1
MsaG000631 MtrunA17_Chr2g0281601 22.259 301 174 9 334 584 665 955 2.69e-12 72.0
MsaG000631 MtrunA17_Chr7g0255821 33.526 173 111 3 601 769 644 816 1.12e-19 95.5
MsaG000631 MtrunA17_Chr7g0255821 24.390 369 212 11 254 583 194 534 4.81e-17 87.0
MsaG000631 MtrunA17_Chr7g0232991 24.130 431 257 13 429 826 272 665 7.29e-19 92.4
MsaG000631 MtrunA17_Chr1g0212331 37.500 128 77 2 623 748 887 1013 4.30e-18 90.9
MsaG000631 MtrunA17_Chr1g0212331 23.602 322 196 11 327 600 398 717 2.74e-13 75.1
MsaG000631 MtrunA17_Chr4g0024921 29.936 157 107 3 614 769 775 929 5.54e-16 83.6
MsaG000631 MtrunA17_Chr4g0039561 38.393 112 54 2 560 664 42 145 3.88e-15 75.5
MsaG000631 MtrunA17_Chr2g0326991 29.078 141 93 2 612 750 25 160 2.12e-13 75.5
MsaG000631 MtrunA17_Chr2g0320781 32.500 120 76 1 623 737 111 230 2.22e-12 68.6
MsaG000631 MtrunA17_Chr5g0428401 26.437 174 110 5 606 766 1476 1644 4.24e-12 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsaG000631 AT2G25170.2 61.283 1356 451 22 1 1308 18 1347 0.0 1611
MsaG000631 AT2G25170.1 61.283 1356 451 22 1 1308 1 1330 0.0 1609
MsaG000631 AT2G25170.4 61.283 1356 451 22 1 1308 1 1330 0.0 1609
MsaG000631 AT2G25170.3 61.283 1356 451 22 1 1308 27 1356 0.0 1608
MsaG000631 AT4G31900.3 55.238 1050 384 19 98 1106 43 1047 0.0 1125
MsaG000631 AT4G31900.1 54.726 1058 385 19 98 1106 43 1055 0.0 1123
MsaG000631 AT4G31900.2 55.533 967 346 14 180 1106 92 1014 0.0 1063
MsaG000631 AT2G13370.1 36.648 1056 526 35 111 1099 445 1424 0.0 581
MsaG000631 AT2G13370.2 36.648 1056 526 35 111 1099 445 1424 0.0 581
MsaG000631 AT2G13370.3 36.648 1056 526 35 111 1099 445 1424 0.0 581
MsaG000631 AT5G44800.1 40.914 853 390 23 124 901 548 1361 9.10e-170 558
MsaG000631 AT5G18620.1 43.691 531 256 8 281 802 192 688 2.02e-122 407
MsaG000631 AT5G18620.2 43.691 531 256 8 281 802 192 688 2.21e-122 407
MsaG000631 AT3G06400.2 43.691 531 256 8 281 802 187 683 3.26e-122 406
MsaG000631 AT3G06400.1 43.691 531 256 8 281 802 187 683 4.24e-122 406
MsaG000631 AT5G19310.2 40.437 549 270 8 261 780 92 612 1.89e-118 389
MsaG000631 AT5G19310.1 40.437 549 270 8 261 780 356 876 8.34e-116 389
MsaG000631 AT3G06010.1 39.636 550 276 8 260 780 372 894 3.39e-113 382
MsaG000631 AT5G66750.1 39.434 601 292 15 240 804 160 724 1.77e-108 360
MsaG000631 AT2G44980.3 38.123 522 273 9 276 767 44 545 1.19e-100 342
MsaG000631 AT2G44980.1 38.132 514 266 10 276 767 44 527 9.96e-100 338
MsaG000631 AT2G28290.3 35.948 612 304 11 221 776 671 1250 2.32e-99 352
MsaG000631 AT2G28290.4 35.948 612 304 11 221 776 671 1250 2.32e-99 352
MsaG000631 AT2G28290.5 35.948 612 304 11 221 776 672 1251 2.44e-99 352
MsaG000631 AT2G28290.6 35.948 612 304 11 221 776 672 1251 2.50e-99 352
MsaG000631 AT2G28290.2 35.948 612 304 11 221 776 671 1250 2.63e-99 352
MsaG000631 AT2G28290.1 35.948 612 304 11 221 776 671 1250 2.65e-99 352
MsaG000631 AT2G44980.2 37.859 523 274 10 276 767 44 546 2.03e-98 336
MsaG000631 AT2G46020.2 34.753 587 293 11 238 791 938 1467 5.43e-82 298
MsaG000631 AT2G46020.3 34.753 587 293 11 238 791 938 1467 5.43e-82 298
MsaG000631 AT2G46020.4 34.753 587 293 11 238 791 938 1467 5.43e-82 298
MsaG000631 AT2G02090.1 35.413 545 258 13 283 754 213 736 8.77e-82 286
MsaG000631 AT2G46020.5 35.094 587 290 12 238 791 938 1466 1.76e-81 296
MsaG000631 AT2G46020.1 35.094 587 290 12 238 791 938 1466 1.76e-81 296
MsaG000631 AT2G46020.6 35.094 587 290 12 238 791 938 1466 1.76e-81 296
MsaG000631 AT2G18760.4 35.294 510 289 12 282 763 384 880 8.78e-77 278
MsaG000631 AT2G18760.1 35.294 510 289 12 282 763 384 880 8.78e-77 278
MsaG000631 AT2G18760.2 35.294 510 289 12 282 763 384 880 8.78e-77 278
MsaG000631 AT2G18760.7 35.294 510 289 12 282 763 384 880 8.78e-77 278
MsaG000631 AT2G18760.5 35.294 510 289 12 282 763 384 880 8.78e-77 278
MsaG000631 AT2G18760.6 35.294 510 289 12 282 763 384 880 8.78e-77 278
MsaG000631 AT2G18760.3 35.294 510 289 12 282 763 443 939 1.10e-76 279
MsaG000631 AT3G54280.1 29.522 691 362 20 213 810 1375 2033 7.10e-67 250
MsaG000631 AT3G54280.2 29.522 691 362 20 213 810 1406 2064 1.09e-66 249
MsaG000631 AT5G63950.1 32.184 522 256 15 283 739 377 865 7.03e-64 238
MsaG000631 AT5G63950.2 32.157 510 255 16 283 739 377 848 1.60e-60 227
MsaG000631 AT3G19210.3 26.773 564 321 14 283 784 180 713 1.78e-55 208
MsaG000631 AT3G19210.1 26.950 564 320 14 283 784 180 713 3.52e-55 209
MsaG000631 AT3G12810.1 38.820 322 160 5 277 585 530 827 6.48e-55 211
MsaG000631 AT3G12810.1 41.423 239 128 5 605 841 1075 1303 2.10e-38 157
MsaG000631 AT3G12810.2 38.820 322 160 5 277 585 526 823 6.64e-55 211
MsaG000631 AT3G12810.2 41.423 239 128 5 605 841 1071 1299 2.17e-38 157
MsaG000631 AT3G57300.1 37.764 331 169 8 273 584 577 889 8.60e-55 211
MsaG000631 AT3G57300.1 48.718 156 79 1 599 754 1200 1354 8.14e-38 155
MsaG000631 AT3G57300.4 37.764 331 169 8 273 584 577 889 8.60e-55 211
MsaG000631 AT3G57300.4 48.718 156 79 1 599 754 1200 1354 8.14e-38 155
MsaG000631 AT3G57300.3 37.879 330 168 8 274 584 578 889 1.20e-54 209
MsaG000631 AT3G19210.2 26.821 563 320 14 283 784 180 711 1.50e-54 207
MsaG000631 AT3G57300.2 35.795 352 180 10 273 584 577 922 3.30e-52 202
MsaG000631 AT3G57300.2 48.718 156 79 1 599 754 1233 1387 8.72e-38 155
MsaG000631 AT1G48310.1 27.859 481 290 15 282 747 171 609 2.71e-38 154
MsaG000631 AT1G48310.2 27.859 481 290 15 282 747 176 614 3.13e-38 154
MsaG000631 AT1G48310.3 27.859 481 290 15 282 747 171 609 3.32e-38 153
MsaG000631 AT1G02670.7 24.513 616 352 16 244 779 85 667 1.35e-32 136
MsaG000631 AT1G02670.1 24.513 616 352 16 244 779 96 678 1.45e-32 136
MsaG000631 AT1G03750.1 31.757 296 148 6 282 549 138 407 3.46e-32 136
MsaG000631 AT1G03750.1 38.043 184 108 2 605 783 528 710 4.74e-30 129
MsaG000631 AT1G02670.6 24.138 638 350 16 244 779 58 663 3.83e-32 135
MsaG000631 AT1G02670.3 24.138 638 350 16 244 779 85 690 4.21e-32 135
MsaG000631 AT3G24340.1 25.806 496 317 17 283 736 577 1063 1.27e-29 128
MsaG000631 AT2G21450.2 25.281 534 303 16 282 748 271 775 1.15e-27 121
MsaG000631 AT2G21450.1 25.281 534 303 16 282 748 264 768 1.69e-27 121
MsaG000631 AT2G21450.3 25.281 534 303 16 282 748 173 677 1.78e-27 120
MsaG000631 AT1G08600.1 41.799 189 94 6 593 766 1083 1270 2.00e-27 122
MsaG000631 AT1G08600.1 28.013 307 146 12 281 549 717 986 1.02e-21 103
MsaG000631 AT1G08600.4 41.799 189 94 6 593 766 1104 1291 2.31e-27 121
MsaG000631 AT1G08600.4 28.479 309 163 12 281 549 717 1007 1.67e-19 95.9
MsaG000631 AT1G08600.3 41.799 189 94 6 593 766 1104 1291 2.31e-27 121
MsaG000631 AT1G08600.3 28.479 309 163 12 281 549 717 1007 1.67e-19 95.9
MsaG000631 AT1G08600.2 41.799 189 94 6 593 766 1104 1291 2.31e-27 121
MsaG000631 AT1G08600.2 28.479 309 163 12 281 549 717 1007 1.67e-19 95.9
MsaG000631 AT1G02670.5 23.379 586 319 15 244 727 58 615 3.05e-26 116
MsaG000631 AT1G02670.2 23.379 586 319 15 244 727 85 642 4.82e-26 115
MsaG000631 AT2G16390.2 25.237 527 306 17 280 749 350 845 9.75e-25 112
MsaG000631 AT2G16390.1 25.237 527 306 17 280 749 347 842 1.17e-24 112
MsaG000631 AT5G22750.1 34.706 170 108 3 598 766 857 1024 3.87e-23 107
MsaG000631 AT5G22750.1 25.000 344 173 10 305 583 416 739 2.17e-21 102
MsaG000631 AT3G42670.4 25.599 543 309 20 305 771 711 1234 4.78e-21 100
MsaG000631 AT3G42670.2 25.599 543 309 20 305 771 709 1232 5.20e-21 100
MsaG000631 AT3G42670.3 25.599 543 309 20 305 771 709 1232 5.20e-21 100
MsaG000631 AT3G42670.1 25.599 543 309 20 305 771 709 1232 5.20e-21 100
MsaG000631 AT5G43530.1 32.164 171 112 3 604 771 1108 1277 9.73e-21 100
MsaG000631 AT5G43530.1 24.251 334 169 12 305 583 684 988 1.62e-17 89.4
MsaG000631 AT1G61140.3 32.237 152 102 1 615 766 959 1109 1.28e-20 99.4
MsaG000631 AT1G61140.3 21.212 297 193 7 330 585 506 802 2.79e-12 72.4
MsaG000631 AT1G61140.1 32.237 152 102 1 615 766 1117 1267 1.44e-20 99.4
MsaG000631 AT1G61140.1 21.212 297 193 7 330 585 664 960 1.60e-12 73.2
MsaG000631 AT1G05490.1 25.000 340 211 10 429 736 1008 1335 5.32e-20 97.4
MsaG000631 AT5G05130.1 35.152 165 104 3 609 770 712 876 1.30e-19 95.9
MsaG000631 AT5G05130.1 28.230 209 112 6 400 580 401 599 1.39e-13 76.3
MsaG000631 AT1G48310.4 28.975 283 161 11 282 549 171 428 2.17e-19 94.0
MsaG000631 AT5G20420.1 24.260 507 289 19 305 737 714 1199 5.11e-19 94.4
MsaG000631 AT5G07810.1 26.962 293 155 10 283 550 204 462 1.49e-18 92.8
MsaG000631 AT3G20010.3 33.083 133 88 1 623 755 628 759 4.53e-18 90.9
MsaG000631 AT3G20010.3 23.574 263 160 6 327 548 144 406 3.94e-12 71.6
MsaG000631 AT3G20010.2 33.083 133 88 1 623 755 603 734 4.93e-18 90.5
MsaG000631 AT3G20010.2 23.574 263 160 6 327 548 119 381 3.28e-12 71.6
MsaG000631 AT3G20010.1 33.083 133 88 1 623 755 894 1025 7.12e-18 90.5
MsaG000631 AT3G20010.1 23.304 339 204 10 327 613 410 744 4.51e-12 71.6
MsaG000631 AT3G20010.5 33.083 133 88 1 623 755 894 1025 7.12e-18 90.5
MsaG000631 AT3G20010.5 23.304 339 204 10 327 613 410 744 4.51e-12 71.6
MsaG000631 AT3G20010.7 33.083 133 88 1 623 755 894 1025 7.12e-18 90.5
MsaG000631 AT3G20010.7 23.304 339 204 10 327 613 410 744 4.51e-12 71.6
MsaG000631 AT1G50410.2 35.938 128 79 2 623 748 828 954 8.39e-18 90.1
MsaG000631 AT1G50410.2 21.895 306 190 9 327 584 339 643 1.00e-13 77.0
MsaG000631 AT1G50410.1 35.938 128 79 2 623 748 828 954 8.39e-18 90.1
MsaG000631 AT1G50410.1 21.895 306 190 9 327 584 339 643 1.00e-13 77.0
MsaG000631 AT1G50410.3 35.938 128 79 2 623 748 828 954 8.39e-18 90.1
MsaG000631 AT1G50410.3 21.895 306 190 9 327 584 339 643 1.00e-13 77.0
MsaG000631 AT1G11100.3 32.653 147 96 2 621 766 972 1116 1.30e-17 89.7
MsaG000631 AT1G11100.5 32.653 147 96 2 621 766 928 1072 1.38e-17 89.4
MsaG000631 AT1G11100.5 21.512 344 174 9 305 580 424 739 1.98e-14 79.3
MsaG000631 AT1G11100.2 32.653 147 96 2 621 766 1114 1258 1.53e-17 89.4
MsaG000631 AT1G11100.1 32.653 147 96 2 621 766 1071 1215 1.54e-17 89.4
MsaG000631 AT1G11100.1 21.512 344 174 9 305 580 567 882 1.32e-14 79.7
MsaG000631 AT1G11100.4 32.653 147 96 2 621 766 1115 1259 1.56e-17 89.4
MsaG000631 AT1G05120.2 32.704 159 101 5 601 755 701 857 1.32e-16 86.3
MsaG000631 AT1G05120.1 32.704 159 101 5 601 755 658 814 1.42e-16 85.9
MsaG000631 AT1G02670.4 27.969 261 143 7 244 486 85 318 1.33e-15 82.0
MsaG000631 AT3G16600.1 24.024 333 191 11 286 585 56 359 1.46e-14 79.0
MsaG000631 AT3G16600.1 35.185 108 68 1 652 757 483 590 4.10e-12 71.2
MsaG000631 AT1G08060.1 26.522 230 146 9 560 778 514 731 7.57e-14 77.4
MsaG000631 AT1G08060.2 26.522 230 146 9 560 778 514 731 7.57e-14 77.4
MsaG000631 AT1G50410.4 21.895 306 190 9 327 584 339 643 9.18e-14 77.0
MsaG000631 AT1G08060.3 26.407 231 146 9 560 778 514 732 1.42e-13 76.6
MsaG000631 AT1G61140.2 21.212 297 193 7 330 585 671 967 1.76e-12 72.8
MsaG000631 AT3G20010.4 23.304 339 204 10 327 613 410 744 3.64e-12 71.6
MsaG000631 AT3G20010.6 23.304 339 204 10 327 613 410 744 3.64e-12 71.6
MsaG000631 AT3G20010.8 23.304 339 204 10 327 613 410 744 3.64e-12 71.6
MsaG000631 AT2G40770.2 29.651 172 102 4 591 746 1416 1584 6.23e-12 71.2
MsaG000631 AT2G40770.1 29.651 172 102 4 591 746 1416 1584 6.23e-12 71.2
MsaG000631 AT2G40770.3 29.651 172 102 4 591 746 1416 1584 6.23e-12 71.2

Find 245 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCATGCACTCCCACTTTA+TGG 0.101907 1:-8323173 None:intergenic
TGGATTTCTGAAAGCCTTTA+AGG 0.126912 1:+8327170 MsaT000631.1:CDS
CACTGTTGCTGCCGAAAATT+TGG 0.176359 1:+8321182 MsaT000631.1:CDS
TTTCCTTCACCTTCCATTAA+AGG 0.186653 1:-8328383 None:intergenic
CACTTTCTACACTGCGAAAC+TGG 0.188146 1:+8322844 MsaT000631.1:CDS
CACAAATCCACCACCTTTAA+TGG 0.194130 1:+8328370 MsaT000631.1:CDS
CGTATGAGAGTTAACCTTAA+AGG 0.199789 1:-8327184 None:intergenic
CATAGCCCCGAATTTCTTTC+AGG 0.208876 1:+8322394 MsaT000631.1:CDS
TGATATCCTTAAACTCTTCT+TGG 0.215907 1:-8324315 None:intergenic
CTTCAGAAGGAAATCACTTT+TGG 0.223602 1:+8327852 MsaT000631.1:CDS
GTCGGATATCTCTTCGTTTC+AGG 0.224238 1:+8322246 MsaT000631.1:CDS
GATTCAATATATTTCGTTCT+AGG 0.231194 1:+8322281 MsaT000631.1:CDS
CACTTACAGAGTATTCTTTC+TGG 0.232566 1:-8330022 None:intergenic
AGTATTAGACTTACACATTC+AGG 0.247285 1:-8321043 None:intergenic
TTTCTTCTTGGAAGGTCTTC+TGG 0.261012 1:-8328243 None:intergenic
TCTATTTGAAGTCCTTCTTT+TGG 0.265106 1:-8328960 None:intergenic
TTTCTATTAAGGCATGGATA+TGG 0.272791 1:+8329663 MsaT000631.1:intron
TCTACTAGAGCTGGTGGATT+GGG 0.274315 1:+8326128 MsaT000631.1:CDS
TGTATTACAAGCTTTCTTCT+TGG 0.280113 1:-8328255 None:intergenic
CGGCATCGTCGTAATGAATT+TGG 0.282881 1:-8326996 None:intergenic
GGTAGTGCTGCAGCAGTTAA+TGG 0.286681 1:+8329861 MsaT000631.1:CDS
TGAAGTACTCATTAGAATTT+CGG 0.286903 1:+8328983 MsaT000631.1:CDS
TCTATGTTTCAGACAAATAC+TGG 0.289261 1:+8325771 MsaT000631.1:intron
AGAGTTCCAAGAAGAGTTTA+AGG 0.294300 1:+8324309 MsaT000631.1:CDS
ACTGTTGCTGCCGAAAATTT+GGG 0.299584 1:+8321183 MsaT000631.1:CDS
ACCATGCACTCCCACTTTAT+GGG 0.301385 1:-8323172 None:intergenic
AAGAAAGAGGTTTCCTCTCT+TGG 0.308670 1:+8329974 MsaT000631.1:CDS
CGATGAACCGTAGTCCATTC+AGG 0.311680 1:-8321656 None:intergenic
GACTGAACTACCTCCTAAAA+AGG 0.317520 1:+8324795 MsaT000631.1:CDS
TTTGACAGGAACTCCTCTTC+AGG 0.319293 1:+8323404 MsaT000631.1:CDS
TTCTCTTAACAATATTGTTA+TGG 0.323347 1:+8325046 MsaT000631.1:CDS
TTTGGGGTCCAAACCAAGTT+TGG 0.328329 1:+8321200 MsaT000631.1:CDS
GGAAAATCGCTAAAAGTTCT+TGG 0.329834 1:+8328401 MsaT000631.1:CDS
TTCAAAGGGGATTCCACATT+TGG 0.332541 1:-8329819 None:intergenic
TTCAATCCCTCAAGTTGATA+TGG 0.340274 1:-8322568 None:intergenic
TGTTATACTTGCTGATGAAA+TGG 0.341387 1:+8322624 MsaT000631.1:CDS
AGCAAAATGCCTTGGGTAAA+GGG 0.345276 1:+8327918 MsaT000631.1:CDS
CCTTAAATTGAGAAAATATA+AGG 0.353648 1:-8325861 None:intergenic
TAAGAAAGCAATACTTTGTA+TGG 0.354240 1:-8322775 None:intergenic
GAGGCAGTTGATATCTCGTT+TGG 0.356582 1:-8330406 None:intergenic
TGATGCATTTCAGAATAATC+TGG 0.371859 1:+8324128 MsaT000631.1:intron
TTGTTCTTCTTCGGATTCTT+CGG 0.375937 1:-8323040 None:intergenic
ACGAAACCGGACAACATTAC+TGG 0.378498 1:+8327943 MsaT000631.1:CDS
AAATCTCCCGTCTTGACAAC+TGG 0.382938 1:+8321014 MsaT000631.1:CDS
ATCAGGGAAGTTGCAATTGT+TGG 0.385913 1:+8325798 MsaT000631.1:CDS
GACAAGCATTCTCTTTCAAA+AGG 0.387899 1:-8322803 None:intergenic
TTCATCGAATACTTGCTTGC+AGG 0.388267 1:+8321672 MsaT000631.1:CDS
CAAACAGAGAGAATATTATA+AGG 0.391292 1:+8324846 MsaT000631.1:CDS
AAACAACTTTCATCGTCAAA+TGG 0.392217 1:+8321589 MsaT000631.1:CDS
TTTCTTCTTTCTACTAGAGC+TGG 0.396370 1:+8326119 MsaT000631.1:CDS
TTCTACTAGAGCTGGTGGAT+TGG 0.400884 1:+8326127 MsaT000631.1:CDS
TAGGAAGATTTCTTATAGTA+AGG 0.401105 1:+8322306 MsaT000631.1:CDS
AAGAATCTTCAGCATTAAAT+CGG 0.405258 1:-8326085 None:intergenic
TCGTTTCGCCAAACTTGGTT+TGG 0.407028 1:-8321208 None:intergenic
CTCTAATAGTGCTACGAGCT+TGG 0.415041 1:-8323000 None:intergenic
TTTCTGTAGGTTATGTATGT+TGG 0.417971 1:+8322971 MsaT000631.1:intron
TGGCAGTATGAAAGGATAGA+TGG 0.419356 1:+8326026 MsaT000631.1:CDS
GGCTCTTGAGCGGATTGATT+TGG 0.421269 1:-8330918 None:intergenic
TTTGTCATTGATAAGGGAAA+AGG 0.421283 1:+8329007 MsaT000631.1:CDS
CGAGGCAGTGTTGACCGATT+AGG 0.421340 1:-8330642 None:intergenic
AATGATTCCCCTACATTCTC+AGG 0.422119 1:+8328833 MsaT000631.1:CDS
AGACAAATACTGGAATCATC+AGG 0.422942 1:+8325781 MsaT000631.1:intron
CTGTTATCAGAACTTGTTGT+CGG 0.424262 1:-8330939 None:intergenic
GCTTGAGAAGTACAAAGATA+TGG 0.427283 1:+8329395 MsaT000631.1:CDS
GTCAGATATTGTTGATGATA+AGG 0.427532 1:+8329692 MsaT000631.1:CDS
CTTATGCACTTCCTTGATGC+TGG 0.428463 1:+8324165 MsaT000631.1:CDS
ATATATTTCGTTCTAGGTCT+AGG 0.428843 1:+8322287 MsaT000631.1:CDS
AGAGAATGCTTGTCCACATT+TGG 0.430349 1:+8322812 MsaT000631.1:CDS
TGAACTTCTTACGTTTCTCT+TGG 0.434712 1:+8322587 MsaT000631.1:CDS
TCTAATAGTGCTACGAGCTT+GGG 0.436033 1:-8322999 None:intergenic
AGATATCGTTTCGCCAAACT+TGG 0.436619 1:-8321213 None:intergenic
ACATGAGTAGCTTGGTTGAC+AGG 0.438986 1:+8320026 None:intergenic
GTGTTAGAACACGTAGTTGT+AGG 0.442285 1:+8326785 MsaT000631.1:CDS
GAGCAAAATGCCTTGGGTAA+AGG 0.447216 1:+8327917 MsaT000631.1:CDS
ATCTATCACCTGAGAATGTA+GGG 0.448011 1:-8328841 None:intergenic
AACAGTTACTACAAGAAAGT+TGG 0.448062 1:+8323081 MsaT000631.1:CDS
AACAATTGAAGAAAGGATGA+TGG 0.448690 1:+8326742 MsaT000631.1:CDS
TCACCTTCCATTAAAGGTGG+TGG 0.449902 1:-8328377 None:intergenic
AAAGGCTCAAAACATAAAAC+AGG 0.454988 1:+8326811 MsaT000631.1:CDS
ATCCGAAGAAGAACAAGAAA+AGG 0.456222 1:+8323047 MsaT000631.1:CDS
TTAAATAATGAAGATGAAAG+TGG 0.456516 1:+8327150 MsaT000631.1:CDS
ACGATGAAAGTTGTTTACTT+TGG 0.457846 1:-8321582 None:intergenic
TCTCCCTAGACTGGTTCAAA+GGG 0.459359 1:-8329833 None:intergenic
ACGACGATGCCGCTATTGAC+AGG 0.459469 1:+8327007 MsaT000631.1:CDS
GCTTCAATGATGCGGTATCT+TGG 0.462055 1:-8323150 None:intergenic
AGGCAGTTGATATCTCGTTT+GGG 0.462929 1:-8330405 None:intergenic
GAATCCTCATGCTGATCTAC+AGG 0.464174 1:+8326476 MsaT000631.1:CDS
TCCCAATGGCATTCATCATA+AGG 0.469105 1:-8322217 None:intergenic
AAGAGTTGGACGACATCATC+AGG 0.470615 1:+8326920 MsaT000631.1:CDS
TTCTCAATTTAAGGGCATGC+TGG 0.471110 1:+8325870 MsaT000631.1:CDS
ATCAGTTGTCATACCATTGT+AGG 0.471290 1:+8330962 MsaT000631.1:CDS
AGGATAGATGGAAATGTTGA+TGG 0.473210 1:+8326038 MsaT000631.1:CDS
GCTTTCAGAAACTCTTGCTC+TGG 0.474776 1:-8321533 None:intergenic
CTTGTGACAGTGATCCTAAT+CGG 0.475655 1:+8330628 MsaT000631.1:CDS
CTAGAAGGTGTAGGCTCTGA+TGG 0.475724 1:+8328155 MsaT000631.1:CDS
ACAAAACTAGAAACCATTGT+TGG 0.476448 1:+8330873 MsaT000631.1:CDS
TTATCATGCTTAGGAAGAGT+TGG 0.477906 1:+8326906 MsaT000631.1:intron
GTTATACTTGCTGATGAAAT+GGG 0.478199 1:+8322625 MsaT000631.1:CDS
TTCGAGGCTTCATACATTGT+TGG 0.478580 1:+8324354 MsaT000631.1:CDS
CAGCAATATGAGACAAGAAA+AGG 0.478938 1:-8328802 None:intergenic
TCCTTATGATGAATGCCATT+GGG 0.482192 1:+8322216 MsaT000631.1:CDS
AGTTGAAGAGCAAAATGCCT+TGG 0.482872 1:+8327910 MsaT000631.1:CDS
TGGGTAAAGGGAAACGAAAC+CGG 0.483078 1:+8327930 MsaT000631.1:CDS
CGTCCTCTTCATCTCCAACT+TGG 0.484048 1:-8327125 None:intergenic
ATCAAGAGCAACAAGTTTCG+AGG 0.484323 1:+8324338 MsaT000631.1:CDS
AACAACTTTCATCGTCAAAT+GGG 0.484398 1:+8321590 MsaT000631.1:CDS
GGCATACCAGTAATGTTGTC+CGG 0.484467 1:-8327949 None:intergenic
ATCTTATCAATATCATTAAG+TGG 0.485166 1:-8321138 None:intergenic
AAGTGGTGACAGTAAACAAC+CGG 0.485794 1:-8320990 None:intergenic
AACCAGTCTAGGGAGAATAA+TGG 0.489799 1:+8329840 MsaT000631.1:CDS
GATCTATCACCTGAGAATGT+AGG 0.492778 1:-8328842 None:intergenic
CTACATCCATATCAACTTGA+GGG 0.493022 1:+8322562 MsaT000631.1:CDS
CATAAGTCTTCTGCTTCATG+TGG 0.493267 1:-8328626 None:intergenic
TTCCTTATGATGAATGCCAT+TGG 0.495300 1:+8322215 MsaT000631.1:CDS
TTGTCCAACTCGATGAGCTC+TGG 0.495698 1:-8326505 None:intergenic
TTCTCCCTAGACTGGTTCAA+AGG 0.500929 1:-8329834 None:intergenic
CTTCTTTCTACTAGAGCTGG+TGG 0.502040 1:+8326122 MsaT000631.1:CDS
GACATCTTGTCACGGTATGC+AGG 0.503180 1:+8329373 MsaT000631.1:CDS
AATCCCCTTTGAACCAGTCT+AGG 0.503209 1:+8329829 MsaT000631.1:CDS
TACCCCTGCAGGATTGAAGA+AGG 0.504929 1:+8324765 MsaT000631.1:intron
TTGTTGCCATTCGACCTGAA+TGG 0.505730 1:+8321642 MsaT000631.1:CDS
TGAAAATTATTGTGTTTACA+AGG 0.505863 1:+8325900 MsaT000631.1:CDS
AAATTGATTTCATAAGAAAG+AGG 0.507071 1:+8329961 MsaT000631.1:CDS
GTTGAAGAGCAAAATGCCTT+GGG 0.509231 1:+8327911 MsaT000631.1:CDS
TTACAAGCTTTCTTCTTGGA+AGG 0.510255 1:-8328251 None:intergenic
GCACTTCCTTGATGCTGGGA+AGG 0.511269 1:+8324170 MsaT000631.1:CDS
TCAACTCCTTCCAACATGTA+TGG 0.511829 1:-8325092 None:intergenic
TGGAAGGAATTGCTAAAAGA+CGG 0.513386 1:+8327872 MsaT000631.1:CDS
CAGGGACAATGGTGCTGAGA+AGG 0.514116 1:+8322168 MsaT000631.1:intron
GATTATGAAGTGGATCATAC+TGG 0.517268 1:+8328188 MsaT000631.1:CDS
GTCAATAACAGGTTTGGGGT+CGG 0.518306 1:+8328576 MsaT000631.1:intron
TACCATTATTCTCCCTAGAC+TGG 0.518566 1:-8329842 None:intergenic
TCATGCTGATCTACAGGCTA+TGG 0.520030 1:+8326482 MsaT000631.1:CDS
TCTAAATTGCGATAATAGAT+CGG 0.520348 1:-8329922 None:intergenic
ACCAGCATTGGCAGTATGAA+AGG 0.520777 1:+8326018 MsaT000631.1:intron
GGAAATAACTAAGAAGAAGA+TGG 0.520915 1:+8326763 MsaT000631.1:CDS
GTAGATGGTGTTCCAAAAGA+AGG 0.522402 1:+8328948 MsaT000631.1:intron
GCCCATAAAGTGGGAGTGCA+TGG 0.522573 1:+8323171 MsaT000631.1:CDS
TCAGCAGAACATGAGTAGCT+TGG 0.526460 1:+8320018 None:intergenic
CTTGCTGATGAAATGGGACT+TGG 0.527291 1:+8322631 MsaT000631.1:CDS
GTATTAGACTTACACATTCA+GGG 0.527822 1:-8321042 None:intergenic
GATAAAGATGTATACTTCGT+AGG 0.528219 1:-8324387 None:intergenic
CTTTCCTTCAGACTTTAATG+AGG 0.528901 1:+8328447 MsaT000631.1:CDS
GGGAGCGCGAATTTGAAAGA+TGG 0.531612 1:+8322865 MsaT000631.1:CDS
GTTTCGTTTCCCTTTACCCA+AGG 0.532290 1:-8327927 None:intergenic
CCTTCACCTTCCATTAAAGG+TGG 0.532753 1:-8328380 None:intergenic
CATCATCAGGTATGGCTCAA+AGG 0.534600 1:+8326933 MsaT000631.1:CDS
TGTATACTTCGTAGGAGATG+TGG 0.535373 1:-8324379 None:intergenic
CAGTTTCGCAGTGTAGAAAG+TGG 0.539207 1:-8322843 None:intergenic
GTATACTTCGTAGGAGATGT+GGG 0.545185 1:-8324378 None:intergenic
GTTTGAGTAGGTTCATTTCG+AGG 0.545352 1:-8330383 None:intergenic
CACGAGGAACAATTGAAGAA+AGG 0.548445 1:+8326735 MsaT000631.1:CDS
CTACTAGAGCTGGTGGATTG+GGG 0.550233 1:+8326129 MsaT000631.1:CDS
AAGTATAACATGAGTTTGCT+TGG 0.551969 1:-8322611 None:intergenic
TTTGTTTAATACAGGGACAA+TGG 0.554370 1:+8322157 MsaT000631.1:intron
ATAGCCCCGAATTTCTTTCA+GGG 0.554459 1:+8322395 MsaT000631.1:CDS
TATCTCGTTTGGGTTTGAGT+AGG 0.554911 1:-8330395 None:intergenic
ACTTTCTACACTGCGAAACT+GGG 0.555145 1:+8322845 MsaT000631.1:CDS
TATTCAGAGAGTCATCTGTC+AGG 0.556594 1:+8329722 MsaT000631.1:CDS
ACTTGTTGTCGGCTCTTGAG+CGG 0.559813 1:-8330928 None:intergenic
ACGGATTCATGTCAAGCTTG+TGG 0.560143 1:+8320917 MsaT000631.1:CDS
GGAGCGCGAATTTGAAAGAT+GGG 0.560761 1:+8322866 MsaT000631.1:CDS
TACTAACCTTCCCAGCATCA+AGG 0.561391 1:-8324176 None:intergenic
ACAAGCATTCTCTTTCAAAA+GGG 0.561456 1:-8322802 None:intergenic
TTATGCACTTCCTTGATGCT+GGG 0.561542 1:+8324166 MsaT000631.1:CDS
GTAACCTCATTAAAGTCTGA+AGG 0.562752 1:-8328451 None:intergenic
ATCCCCTTTGAACCAGTCTA+GGG 0.562855 1:+8329830 MsaT000631.1:CDS
ATGGCCAGAGCTCATCGAGT+TGG 0.567667 1:+8326501 MsaT000631.1:CDS
GCACATCCAGTTGTCAAGAC+GGG 0.570209 1:-8321020 None:intergenic
CATCATTGAAGCCCATAAAG+TGG 0.573099 1:+8323161 MsaT000631.1:CDS
AGAAGGAATATCTTGTGAAG+TGG 0.573172 1:+8322185 MsaT000631.1:CDS
AGTGGAGCAACCACCAAATG+TGG 0.573936 1:-8322825 None:intergenic
ATAAGTCTTCTGCTTCATGT+GGG 0.574232 1:-8328625 None:intergenic
GGCACATCCAGTTGTCAAGA+CGG 0.576340 1:-8321021 None:intergenic
TTGGACGACATCATCAGGTA+TGG 0.577243 1:+8326925 MsaT000631.1:CDS
TAACTGTGTCTGCCGTTGCA+AGG 0.577392 1:-8326157 None:intergenic
ATGATGAAGCTTAAAGAGCA+AGG 0.577899 1:+8325829 MsaT000631.1:CDS
ACACAGTTATTATATATGAC+AGG 0.579097 1:+8326171 MsaT000631.1:CDS
AAATTCACATCAGAGAATCC+TGG 0.579599 1:+8329331 MsaT000631.1:CDS
CATTCGACCTGAATGGACTA+CGG 0.580178 1:+8321649 MsaT000631.1:CDS
CGTAGTCCATTCAGGTCGAA+TGG 0.580380 1:-8321648 None:intergenic
ACACGTAGTTGTAGGCAGAA+AGG 0.581138 1:+8326793 MsaT000631.1:CDS
TTACCATCGCTAGGACAAGT+TGG 0.581980 1:+8329768 MsaT000631.1:CDS
TCTTATCAATATCATTAAGT+GGG 0.582753 1:-8321137 None:intergenic
CGACCAAGTTGGAGATGAAG+AGG 0.585968 1:+8327122 MsaT000631.1:CDS
TGAATATGTTGATAAAGTCG+AGG 0.589470 1:+8327829 MsaT000631.1:CDS
CTGTTGCTGCCGAAAATTTG+GGG 0.591712 1:+8321184 MsaT000631.1:CDS
CGAGGAAGATGATTATGAAG+TGG 0.592183 1:+8328178 MsaT000631.1:CDS
GCTGATGAGAATGATGTGGC+TGG 0.592706 1:+8326964 MsaT000631.1:CDS
GATAAAGTCGAGGCTTCAGA+AGG 0.593595 1:+8327839 MsaT000631.1:CDS
TAAGGCATGGATATGGAAAG+TGG 0.594164 1:+8329670 MsaT000631.1:intron
CGAAACGATATCTTGTGAAG+TGG 0.596013 1:+8321223 MsaT000631.1:CDS
GACAAATACTGGAATCATCA+GGG 0.596550 1:+8325782 MsaT000631.1:intron
TTTGCTCGTCTAGAAGGTGT+AGG 0.596643 1:+8328146 MsaT000631.1:CDS
TGATGAAGCTTAAAGAGCAA+GGG 0.597614 1:+8325830 MsaT000631.1:CDS
TACATGCAGATAGTTGATGA+AGG 0.599170 1:+8323309 MsaT000631.1:intron
TTTGTCGACAAGTCCAACAA+TGG 0.599234 1:-8330886 None:intergenic
TATCATATATGCATTGCAGA+TGG 0.603814 1:+8321253 MsaT000631.1:CDS
ATCATTGAAGCCCATAAAGT+GGG 0.605724 1:+8323162 MsaT000631.1:CDS
GAGAAGTACAAAGATATGGA+AGG 0.606067 1:+8329399 MsaT000631.1:CDS
GAATGCTTGTCCACATTTGG+TGG 0.609246 1:+8322815 MsaT000631.1:CDS
ATGGAGATGAAAGACAAGTA+CGG 0.610024 1:+8326057 MsaT000631.1:CDS
AGGTGTAGGCTCTGATGGCG+AGG 0.610777 1:+8328160 MsaT000631.1:CDS
ACTACATCCATATCAACTTG+AGG 0.610933 1:+8322561 MsaT000631.1:CDS
AGCCCCGAATTTCTTTCAGG+GGG 0.612280 1:+8322397 MsaT000631.1:CDS
TAAGTCTTCTGCTTCATGTG+GGG 0.613619 1:-8328624 None:intergenic
TGCACTTATTCGTTCCACAC+CGG 0.616251 1:+8320971 MsaT000631.1:CDS
GTTAGTCAATAACAGGTTTG+GGG 0.617743 1:+8328572 MsaT000631.1:intron
TGTCATCCATACATGTTGGA+AGG 0.619601 1:+8325086 MsaT000631.1:CDS
ATATAAATATCTGCCTACAA+TGG 0.620206 1:-8330975 None:intergenic
CAACTCAGGAAAAGTTTGAG+AGG 0.620958 1:+8320134 MsaT000631.1:CDS
TTTCATACATCGATGTCCAG+AGG 0.621324 1:+8330846 MsaT000631.1:CDS
ATGTTGTCATCCATACATGT+TGG 0.622207 1:+8325082 MsaT000631.1:CDS
TAGCCCCGAATTTCTTTCAG+GGG 0.624068 1:+8322396 MsaT000631.1:CDS
TGGTGCAAATATGCCAAATG+TGG 0.625849 1:+8329806 MsaT000631.1:CDS
CTTTATGGGCTTCAATGATG+CGG 0.627500 1:-8323158 None:intergenic
GCAGCAGTTAATGGAGCACA+TGG 0.629634 1:+8329870 MsaT000631.1:CDS
AATCCACCACCTTTAATGGA+AGG 0.630322 1:+8328374 MsaT000631.1:CDS
GAGATATTAACTCGCCGTGG+TGG 0.637525 1:+8324889 MsaT000631.1:CDS
CCACCTTTAATGGAAGGTGA+AGG 0.639132 1:+8328380 MsaT000631.1:CDS
GAGCCAACTTGTCCTAGCGA+TGG 0.639701 1:-8329771 None:intergenic
TTGTTGGATCGCGACCAAGT+TGG 0.639950 1:+8327111 MsaT000631.1:CDS
ATCTTACTTGTGCTCCACCA+CGG 0.642674 1:-8324903 None:intergenic
ATGCCATTGGGAGCTTGAGT+CGG 0.643092 1:+8322228 MsaT000631.1:CDS
TTCATAAAGTTACCATCGCT+AGG 0.645494 1:+8329759 MsaT000631.1:CDS
TTTCAGACGACATCTTGTCA+CGG 0.646023 1:+8329365 MsaT000631.1:CDS
TGTCAAGCTTGTGGAAAGAG+CGG 0.655768 1:+8320926 MsaT000631.1:CDS
TATCCGACTCAAGCTCCCAA+TGG 0.656240 1:-8322231 None:intergenic
TTTACCTCATTGTAAAGACG+AGG 0.658501 1:-8330660 None:intergenic
TTGACAGATGTGCAATGCTG+TGG 0.664356 1:+8330803 MsaT000631.1:intron
CTCCCTAGACTGGTTCAAAG+GGG 0.666240 1:-8329832 None:intergenic
ACTTTGTTACCTGTCAATAG+CGG 0.668488 1:-8327016 None:intergenic
TATGAGATATTAACTCGCCG+TGG 0.669438 1:+8324886 MsaT000631.1:CDS
GCAGGACAAGATGAAAGCAA+CGG 0.671245 1:+8330343 MsaT000631.1:intron
ATTGGGGATAAACCTTGCAA+CGG 0.673951 1:+8326145 MsaT000631.1:CDS
ATACATACAACATTCATCTG+AGG 0.676161 1:-8322891 None:intergenic
GGACAAGATGAAAGCAACGG+CGG 0.687105 1:+8330346 MsaT000631.1:intron
ACTGCCTCGTCTTTACAATG+AGG 0.690166 1:+8330656 MsaT000631.1:CDS
TCGAGTTGGACAAACTAACA+AGG 0.691334 1:+8326515 MsaT000631.1:CDS
ATTTGCTGATGAGAATGATG+TGG 0.692935 1:+8326960 MsaT000631.1:CDS
ATAGCCTGTAGATCAGCATG+AGG 0.700568 1:-8326480 None:intergenic
TCTATCACCTGAGAATGTAG+GGG 0.707255 1:-8328840 None:intergenic
TATACTTCGTAGGAGATGTG+GGG 0.713293 1:-8324377 None:intergenic
GTGACAGTAAACAACCGGTG+TGG 0.720943 1:-8320985 None:intergenic
TATGAAGTGGATCATACTGG+CGG 0.768694 1:+8328191 MsaT000631.1:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
Chromosome Type Strat End Strand Name
Chr1 gene 8320028 8330983 8320028 ID=MsaG000631
Chr1 mRNA 8320028 8330983 8320028 ID=MsaT000631.1;Parent=MsaG000631
Chr1 exon 8320028 8320174 8320028 ID=MsaT000631.1.exon1;Parent=MsaT000631.1
Chr1 CDS 8320028 8320174 8320028 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8320914 8321051 8320914 ID=MsaT000631.1.exon2;Parent=MsaT000631.1
Chr1 CDS 8320914 8321051 8320914 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8321132 8321274 8321132 ID=MsaT000631.1.exon3;Parent=MsaT000631.1
Chr1 CDS 8321132 8321274 8321132 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8321529 8321693 8321529 ID=MsaT000631.1.exon4;Parent=MsaT000631.1
Chr1 CDS 8321529 8321693 8321529 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8322171 8322418 8322171 ID=MsaT000631.1.exon5;Parent=MsaT000631.1
Chr1 CDS 8322171 8322418 8322171 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8322557 8322652 8322557 ID=MsaT000631.1.exon6;Parent=MsaT000631.1
Chr1 CDS 8322557 8322652 8322557 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8322769 8322905 8322769 ID=MsaT000631.1.exon7;Parent=MsaT000631.1
Chr1 CDS 8322769 8322905 8322769 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8322980 8323192 8322980 ID=MsaT000631.1.exon8;Parent=MsaT000631.1
Chr1 CDS 8322980 8323192 8322980 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8323318 8323425 8323318 ID=MsaT000631.1.exon9;Parent=MsaT000631.1
Chr1 CDS 8323318 8323425 8323318 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8324141 8324191 8324141 ID=MsaT000631.1.exon10;Parent=MsaT000631.1
Chr1 CDS 8324141 8324191 8324141 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8324295 8324394 8324295 ID=MsaT000631.1.exon11;Parent=MsaT000631.1
Chr1 CDS 8324295 8324394 8324295 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8324776 8324918 8324776 ID=MsaT000631.1.exon12;Parent=MsaT000631.1
Chr1 CDS 8324776 8324918 8324776 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8325044 8325147 8325044 ID=MsaT000631.1.exon13;Parent=MsaT000631.1
Chr1 CDS 8325044 8325147 8325044 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8325783 8325921 8325783 ID=MsaT000631.1.exon14;Parent=MsaT000631.1
Chr1 CDS 8325783 8325921 8325783 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8326023 8326192 8326023 ID=MsaT000631.1.exon15;Parent=MsaT000631.1
Chr1 CDS 8326023 8326192 8326023 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8326470 8326536 8326470 ID=MsaT000631.1.exon16;Parent=MsaT000631.1
Chr1 CDS 8326470 8326536 8326470 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8326713 8326832 8326713 ID=MsaT000631.1.exon17;Parent=MsaT000631.1
Chr1 CDS 8326713 8326832 8326713 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8326919 8327028 8326919 ID=MsaT000631.1.exon18;Parent=MsaT000631.1
Chr1 CDS 8326919 8327028 8326919 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8327110 8327191 8327110 ID=MsaT000631.1.exon19;Parent=MsaT000631.1
Chr1 CDS 8327110 8327191 8327110 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8327818 8327964 8327818 ID=MsaT000631.1.exon20;Parent=MsaT000631.1
Chr1 CDS 8327818 8327964 8327818 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8328122 8328269 8328122 ID=MsaT000631.1.exon21;Parent=MsaT000631.1
Chr1 CDS 8328122 8328269 8328122 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8328360 8328468 8328360 ID=MsaT000631.1.exon22;Parent=MsaT000631.1
Chr1 CDS 8328360 8328468 8328360 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8328587 8328661 8328587 ID=MsaT000631.1.exon23;Parent=MsaT000631.1
Chr1 CDS 8328587 8328661 8328587 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8328793 8328854 8328793 ID=MsaT000631.1.exon24;Parent=MsaT000631.1
Chr1 CDS 8328793 8328854 8328793 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8328952 8329028 8328952 ID=MsaT000631.1.exon25;Parent=MsaT000631.1
Chr1 CDS 8328952 8329028 8328952 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8329328 8329458 8329328 ID=MsaT000631.1.exon26;Parent=MsaT000631.1
Chr1 CDS 8329328 8329458 8329328 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8329674 8330037 8329674 ID=MsaT000631.1.exon27;Parent=MsaT000631.1
Chr1 CDS 8329674 8330037 8329674 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8330347 8330443 8330347 ID=MsaT000631.1.exon28;Parent=MsaT000631.1
Chr1 CDS 8330347 8330443 8330347 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8330604 8330677 8330604 ID=MsaT000631.1.exon29;Parent=MsaT000631.1
Chr1 CDS 8330604 8330677 8330604 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Chr1 exon 8330810 8330983 8330810 ID=MsaT000631.1.exon30;Parent=MsaT000631.1
Chr1 CDS 8330810 8330983 8330810 ID=cds.MsaT000631.1;Parent=MsaT000631.1
Gene Sequence

>MsaT000631.1

ATGAGTAGCTTGGTTGACAGGCTTCGTGTAAGATCAGATCGAAAGCAATTTTATACTCAAGATGAGTCAGACGATGATGCTGATTTAATGCCCAGAAAAAGTCCGACAACTCAGGAAAAGTTTGAGAGGATTGTAAGAAGCGATGCAAAAACGGATTCATGTCAAGCTTGTGGAAAGAGCGGAAATCTTCTGAGCTGTAAAAGATGCACTTATTCGTTCCACACCGGTTGTTTACTGTCACCACTTAAAATCTCCCGTCTTGACAACTGGATGTGCCCTGAATGTGTTAGCCCACTTAATGATATTGATAAGATATTAGATTGTAAGATGTGTCCCACTGTTGCTGCCGAAAATTTGGGGTCCAAACCAAGTTTGGCGAAACGATATCTTGTGAAGTGGAACGATCTATCATATATGCATTGCAGATGGGTGCCAGAGCAAGAGTTTCTGAAAGCTTTCAAGATCAATCATCATTTAAAGACCAAAGTAAACAACTTTCATCGTCAAATGGGACCAGTCAGAAAATCAGACGATGACGATTTTGTTGCCATTCGACCTGAATGGACTACGGTTCATCGAATACTTGCTTGCAGGGACAATGGTGCTGAGAAGGAATATCTTGTGAAGTGGAAAGAGCTTCCTTATGATGAATGCCATTGGGAGCTTGAGTCGGATATCTCTTCGTTTCAGGCAGAAATAGAGAGATTCAATATATTTCGTTCTAGGTCTAGGAAGATTTCTTATAGTAAGGAAAAAAGCAGTGTTACTGTTGATGCTGAATTAATAAAGCAGCAGAAAGAATTTCAACAGCATGAACATAGCCCCGAATTTCTTTCAGGGGGTAAACTACATCCATATCAACTTGAGGGATTGAACTTCTTACGTTTCTCTTGGTCCAAGCAAACTCATGTTATACTTGCTGATGAAATGGGACTTGGAAAAACCATACAAAGTATTGCTTTCTTAGCATCCCTTTTGAAAGAGAATGCTTGTCCACATTTGGTGGTTGCTCCACTTTCTACACTGCGAAACTGGGAGCGCGAATTTGAAAGATGGGCACCTCAGATGAATGTTGTTATGTATGTTGGATCTTCCCAAGCTCGTAGCACTATTAGAGAATATGAATTTTACTTTCCGAAGAATCCGAAGAAGAACAAGAAAAGGAATCCTAAAAAAACAGTTACTACAAGAAAGTTGGAAAGCATTAAGTTTGATGTTCTTTTGACATCATATGAGATTATAAACCAAGATACCGCATCATTGAAGCCCATAAAGTGGGAGTGCATGATAGTTGATGAAGGTCACCGACTCAAAAACAAGGACTCTAAATTGTTTTCTTCATTAAAGCAATACTCTAGCAGACATCGTGTGCTTTTGACAGGAACTCCTCTTCAGAATAATCTGGATGAACTGTTTATGCTTATGCACTTCCTTGATGCTGGGAAGTTTGGAAATTTCGAAGAGTTCCAAGAAGAGTTTAAGGATATCAATCAAGAGCAACAAGTTTCGAGGCTTCATACATTGTTGGCCCCACATCTCCTACGAAGATTGAAGAAGGATGTTATGACTGAACTACCTCCTAAAAAGGAGCTTATTATACGTGTTGAATTGAGCAGCAAACAGAGAGAATATTATAAGGCAATTTTGACTCGTAATTATGAGATATTAACTCGCCGTGGTGGAGCACAAATTTCTCTTAACAATATTGTTATGGAACTGCGTAAGCTATGTTGTCATCCATACATGTTGGAAGGAGTTGAGCCAGTTCTTCACAAAGAAAAAGAAGCATATAAACAAATACTGGAATCATCAGGGAAGTTGCAATTGTTGGACAAGCTAATGATGAAGCTTAAAGAGCAAGGGCATAGAGTCCTTATATTTTCTCAATTTAAGGGCATGCTGGACATGCTTGAAAATTATTGTGTTTACAAGCATTGGCAGTATGAAAGGATAGATGGAAATGTTGATGGAGATGAAAGACAAGTACGGATAGACCGATTTAATGCTGAAGATTCTTCAAGATTTTGTTTTCTTCTTTCTACTAGAGCTGGTGGATTGGGGATAAACCTTGCAACGGCAGACACAGTTATTATATATGACAGTGATTGGAATCCTCATGCTGATCTACAGGCTATGGCCAGAGCTCATCGAGTTGGACAAACTAACAAGGTGTTGATTTTTAGGCTTATAACACGAGGAACAATTGAAGAAAGGATGATGGAAATAACTAAGAAGAAGATGGTGTTAGAACACGTAGTTGTAGGCAGAAAGGCTCAAAACATAAAACAGGAAGAGTTGGACGACATCATCAGGTATGGCTCAAAGGAGTTATTTGCTGATGAGAATGATGTGGCTGGAAAATCTCGCCAAATTCATTACGACGATGCCGCTATTGACAGATTGTTGGATCGCGACCAAGTTGGAGATGAAGAGGACGCTTTAAATAATGAAGATGAAAGTGGATTTCTGAAAGCCTTTAAGGTGGCAAATTTTGAATATGTTGATAAAGTCGAGGCTTCAGAAGGAAATCACTTTTGGAAGGAATTGCTAAAAGACGGATATGAAGAGAAAAAAGTTGAAGAGCAAAATGCCTTGGGTAAAGGGAAACGAAACCGGACAACATTACTGATGGTTTCTTTTAAGGGGGAGAATTTTGCTCGTCTAGAAGGTGTAGGCTCTGATGGCGAGGAAGATGATTATGAAGTGGATCATACTGGCGGTGATTCAAATTCAACAAGAACTACAACTGCCAGAAGACCTTCCAAGAAGAAAGCTTCTGAAGATAACACAAATCCACCACCTTTAATGGAAGGTGAAGGAAAATCGCTAAAAGTTCTTGGTTATACTCAACGTCAGAGAGCTGCTTTCCTTCAGACTTTAATGAGGTTTGGGGTCGGCGATTTTGATTGGAAGGGTTTTATTCCCCACATGAAGCAGAAGACTTATGAAGAAATCAATGAGTATGGAATCCTTTTCTTGTCTCATATTGCTGAAGATATAAATGATTCCCCTACATTCTCAGATGGTGTTCCAAAAGAAGGACTTCAAATAGATGAAGTACTCATTAGAATTTCGGTTTTGTCATTGATAAGGGAAAAGGTGAAATTCACATCAGAGAATCCTGGCACTCCACTTTTTTCAGACGACATCTTGTCACGGTATGCAGGCTTGAGAAGTACAAAGATATGGAAGGATGAGCATGATTTAGTCTTACTGCATGCAGTTTTGAAGCATGGATATGGAAAGTGGTCAGATATTGTTGATGATAAGGATCTGAATATTCAGAGAGTCATCTGTCAGGAGTTAAATACTCGCTTCATAAAGTTACCATCGCTAGGACAAGTTGGCTCTCAAGTGAAAAATGGTGCAAATATGCCAAATGTGGAATCCCCTTTGAACCAGTCTAGGGAGAATAATGGTAGTGCTGCAGCAGTTAATGGAGCACATGGCTCTTGTGATGCTACGTTGCATCAACTGTCCGATCTATTATCGCAATTTAGAAACATGCAGAGAAGACAAATTGATTTCATAAGAAAGAGGTTTCCTCTCTTGGAAAATTGTCTCAATGATGAATACTGCCAGAAAGAATACTCTGACAAGATGAAAGCAACGGCGGCGACTTATCAAGAACCTCGAAATGAACCTACTCAAACCCAAACGAGATATCAACTGCCTCAACTTGAAAAAATAACTTCAGGAGAATTCTCTATTTCTGCTTGTGACAGTGATCCTAATCGGTCAACACTGCCTCGTCTTTACAATGAGATGTGCAATGCTGTGGCGAAAAATACTGAGGATTTGTTTCATACATCGATGTCCAGAGGACAGACAAAACTAGAAACCATTGTTGGACTTGTCGACAAAATTTTGACACCAAATCAATCCGCTCAAGAGCCGACAACAAGTTCTGATAACAGATCAGTTGTCATACCATTGTAG
Protein sequence

>MsaT000631.1

MSSLVDRLRVRSDRKQFYTQDESDDDADLMPRKSPTTQEKFERIVRSDAKTDSCQACGKSGNLLSCKRCTYSFHTGCLLSPLKISRLDNWMCPECVSPLNDIDKILDCKMCPTVAAENLGSKPSLAKRYLVKWNDLSYMHCRWVPEQEFLKAFKINHHLKTKVNNFHRQMGPVRKSDDDDFVAIRPEWTTVHRILACRDNGAEKEYLVKWKELPYDECHWELESDISSFQAEIERFNIFRSRSRKISYSKEKSSVTVDAELIKQQKEFQQHEHSPEFLSGGKLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIAFLASLLKENACPHLVVAPLSTLRNWEREFERWAPQMNVVMYVGSSQARSTIREYEFYFPKNPKKNKKRNPKKTVTTRKLESIKFDVLLTSYEIINQDTASLKPIKWECMIVDEGHRLKNKDSKLFSSLKQYSSRHRVLLTGTPLQNNLDELFMLMHFLDAGKFGNFEEFQEEFKDINQEQQVSRLHTLLAPHLLRRLKKDVMTELPPKKELIIRVELSSKQREYYKAILTRNYEILTRRGGAQISLNNIVMELRKLCCHPYMLEGVEPVLHKEKEAYKQILESSGKLQLLDKLMMKLKEQGHRVLIFSQFKGMLDMLENYCVYKHWQYERIDGNVDGDERQVRIDRFNAEDSSRFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRVGQTNKVLIFRLITRGTIEERMMEITKKKMVLEHVVVGRKAQNIKQEELDDIIRYGSKELFADENDVAGKSRQIHYDDAAIDRLLDRDQVGDEEDALNNEDESGFLKAFKVANFEYVDKVEASEGNHFWKELLKDGYEEKKVEEQNALGKGKRNRTTLLMVSFKGENFARLEGVGSDGEEDDYEVDHTGGDSNSTRTTTARRPSKKKASEDNTNPPPLMEGEGKSLKVLGYTQRQRAAFLQTLMRFGVGDFDWKGFIPHMKQKTYEEINEYGILFLSHIAEDINDSPTFSDGVPKEGLQIDEVLIRISVLSLIREKVKFTSENPGTPLFSDDILSRYAGLRSTKIWKDEHDLVLLHAVLKHGYGKWSDIVDDKDLNIQRVICQELNTRFIKLPSLGQVGSQVKNGANMPNVESPLNQSRENNGSAAAVNGAHGSCDATLHQLSDLLSQFRNMQRRQIDFIRKRFPLLENCLNDEYCQKEYSDKMKATAATYQEPRNEPTQTQTRYQLPQLEKITSGEFSISACDSDPNRSTLPRLYNEMCNAVAKNTEDLFHTSMSRGQTKLETIVGLVDKILTPNQSAQEPTTSSDNRSVVIPL*