AlfalfaGEDB | MsaG000633

M. sativa ssp. caerulea / MsaG000633

KEGG: K14491
GO: GO:0000156 GO:0000160 GO:0001101 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009888 GO:0009889 GO:0009966 GO:0009987 GO:0010015 GO:0010033 GO:0010035 GO:0010073 GO:0010074 GO:0010075 GO:0010082 GO:0010380 GO:0010468 GO:0010492 GO:0010556 GO:0010646 GO:0019219 GO:0019222 GO:0019827 GO:0022622 GO:0023051 GO:0023052 GO:0031323 GO:0031326 GO:0031537 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048583 GO:0048638 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051193 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071495 GO:0080022 GO:0080036 GO:0080050 GO:0080090 GO:0080113 GO:0090056 GO:0098727 GO:0099402 GO:0140110 GO:1901401 GO:1901463 GO:1901700 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141
PFAM: PF00072.27

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000633	KEH39870.1	83.968	499	33	4	1	454	1	497	0.0	783

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000633	sp\|A2X1N2\|ORR24_ORYSI	56.534	352	116	10	3	339	23	352	5.87e-121	369

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000633	tr\|A0A072VP36\|A0A072VP36_MEDTR	83.968	499	33	4	1	454	1	497	0.0	783

TFs/TRs:

Gene ID	Type	Classification
MsaG000633	TF	GARP-ARR-B

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsaG000281	MsaG000633	0.854487	2.298319e-61	1.457931e-58
MsaG000288	MsaG000633	0.824423	1.441085e-53	3.568402e-51
MsaG000382	MsaG000633	0.818398	3.490320e-52	7.360359e-50
MsaG000622	MsaG000633	0.833843	7.673791e-56	2.483001e-53
MsaG000855	MsaG000633	0.810745	1.693958e-50	2.945797e-48
MsaG001200	MsaG000633	0.843674	2.262987e-58	9.929895e-56
MsaG001672	MsaG000633	0.800442	2.405644e-48	3.285245e-46
MsaG002973	MsaG000633	0.851261	1.902254e-60	1.076801e-57
MsaG003210	MsaG000633	0.801087	1.778802e-48	2.464763e-46
MsaG003187	MsaG000633	0.895715	1.659392e-75	6.646999e-72
MsaG003683	MsaG000633	0.801982	1.168650e-48	1.652552e-46
MsaG004204	MsaG000633	0.886556	6.687505e-72	1.654015e-68
MsaG004504	MsaG000633	0.811602	1.106386e-50	1.964858e-48
MsaG004565	MsaG000633	0.806455	1.382747e-49	2.169209e-47
MsaG005018	MsaG000633	0.809157	3.707764e-50	6.204336e-48
MsaG005119	MsaG000633	0.838091	6.492163e-57	2.387738e-54
MsaG005442	MsaG000633	0.847444	2.174606e-59	1.080910e-56
MsaG005443	MsaG000633	0.839994	2.098372e-57	8.189947e-55
MsaG005444	MsaG000633	0.842626	4.291259e-58	1.820744e-55
MsaG005864	MsaG000633	0.847581	1.995473e-59	9.964154e-57
MsaG006014	MsaG000633	0.825678	7.307018e-54	1.872781e-51
MsaG006037	MsaG000633	0.840337	1.709005e-57	6.742590e-55
MsaG006518	MsaG000633	0.803209	6.541778e-49	9.514767e-47
MsaG006926	MsaG000633	0.836622	1.537417e-56	5.406505e-54
MsaG007287	MsaG000633	0.851608	1.519256e-60	8.703542e-58
MsaG007400	MsaG000633	0.847963	1.568355e-59	7.932823e-57
MsaG007798	MsaG000633	0.806798	1.171684e-49	1.852911e-47
MsaG008881	MsaG000633	0.827861	2.212608e-54	6.027124e-52
MsaG009138	MsaG000633	0.859159	9.823983e-63	7.397726e-60
MsaG009390	MsaG000633	0.825529	7.920912e-54	2.021831e-51
MsaG009501	MsaG000633	0.815875	1.280922e-51	2.531593e-49
MsaG009504	MsaG000633	0.843001	3.414505e-58	1.466254e-55
MsaG009701	MsaG000633	0.834544	5.129594e-56	1.694936e-53
MsaG010263	MsaG000633	0.801923	1.201583e-48	1.696854e-46
MsaG010835	MsaG000633	0.802810	7.905089e-49	1.139195e-46
MsaG010879	MsaG000633	0.835277	3.359991e-56	1.134790e-53
MsaG011806	MsaG000633	0.837349	1.004156e-56	3.610103e-54
MsaG012139	MsaG000633	0.803761	5.033627e-49	7.415199e-47
MsaG012140	MsaG000633	0.811431	1.204843e-50	2.130730e-48
MsaG012187	MsaG000633	0.838642	4.686792e-57	1.753594e-54
MsaG012342	MsaG000633	0.831497	2.912338e-55	8.799598e-53
MsaG012304	MsaG000633	0.841860	6.828618e-58	2.827258e-55
MsaG012555	MsaG000633	0.802719	8.252763e-49	1.186814e-46
MsaG041899	MsaG000633	0.845780	6.162471e-59	2.897402e-56
MsaG041900	MsaG000633	0.814606	2.444154e-51	4.677887e-49
MsaG041901	MsaG000633	0.817903	4.513465e-52	9.396962e-50
MsaG041902	MsaG000633	0.810650	1.775471e-50	3.080479e-48
MsaG041903	MsaG000633	0.822040	5.159030e-53	1.197682e-50
MsaG041904	MsaG000633	0.836599	1.558298e-56	5.476195e-54
MsaG042378	MsaG000633	0.808131	6.126567e-50	1.000174e-47
MsaG043227	MsaG000633	0.811935	9.373118e-51	1.678308e-48
MsaG044218	MsaG000633	0.818063	4.154621e-52	8.685618e-50
MsaG044752	MsaG000633	0.843516	2.491975e-58	1.087964e-55
MsaG044786	MsaG000633	0.836808	1.378709e-56	4.875827e-54
MsaG044885	MsaG000633	0.846276	4.524887e-59	2.162810e-56
MsaG044919	MsaG000633	0.810652	1.774239e-50	3.078440e-48
MsaG045072	MsaG000633	0.871334	1.511046e-66	1.853024e-63
MsaG045078	MsaG000633	0.851441	1.692723e-60	9.641913e-58
MsaG045403	MsaG000633	0.854631	2.089435e-61	1.332149e-58
MsaG045596	MsaG000633	0.823078	2.967070e-53	7.083808e-51
MsaG045611	MsaG000633	0.823339	2.579596e-53	6.202569e-51
MsaG046807	MsaG000633	0.878410	6.022933e-69	1.009967e-65
MsaG046813	MsaG000633	0.822581	3.867938e-53	9.111304e-51
MsaG047152	MsaG000633	0.811616	1.098667e-50	1.951802e-48
MsaG002437	MsaG000633	0.821973	5.344911e-53	1.238620e-50
MsaG000067	MsaG000633	0.801649	1.366331e-48	1.917545e-46
MsaG000633	MsaG002081	0.842516	4.587727e-58	1.939744e-55
MsaG000633	MsaG014176	0.846444	4.072455e-59	1.957402e-56
MsaG000633	MsaG015507	0.803723	5.125742e-49	7.544322e-47
MsaG000633	MsaG016765	0.820343	1.263874e-52	2.805220e-50
MsaG000633	MsaG018815	0.811790	1.007385e-50	1.797298e-48
MsaG000633	MsaG023315	0.824148	1.671568e-53	4.108096e-51
MsaG000633	MsaG030963	0.814035	3.263113e-51	6.156566e-49
MsaG000633	MsaG032845	0.824511	1.374189e-53	3.410953e-51
MsaG000633	MsaG033234	0.807065	1.029470e-49	1.638270e-47
MsaG000633	MsaG033325	0.842935	3.554350e-58	1.523054e-55
MsaG000633	MsaG030214	0.812957	5.619706e-51	1.032028e-48
MsaG000633	MsaG034264	0.818322	3.631900e-52	7.643752e-50
MsaG000633	MsaG037156	0.829216	1.045291e-54	2.957692e-52
MsaG000633	MsaG036665	0.825352	8.720211e-54	2.214943e-51
MsaG000633	MsaG039736	0.856358	6.590695e-62	4.473654e-59
MsaG000633	MsaG039603	0.905093	1.455151e-79	1.008344e-75
MsaG000633	MsaG043458	0.850135	3.931833e-60	2.140575e-57
MsaG012893	MsaG000633	0.809067	3.875201e-50	6.470598e-48
MsaG013184	MsaG000633	0.868389	1.368894e-65	1.483793e-62
MsaG013325	MsaG000633	0.860056	5.292708e-63	4.124040e-60
MsaG013420	MsaG000633	0.804818	3.039910e-49	4.589293e-47
MsaG013621	MsaG000633	0.824554	1.342762e-53	3.336838e-51
MsaG014263	MsaG000633	0.830303	5.697743e-55	1.663312e-52
MsaG015082	MsaG000633	0.806831	1.152986e-49	1.824722e-47
MsaG015216	MsaG000633	0.814548	2.516605e-51	4.809657e-49
MsaG015202	MsaG000633	0.836102	2.081049e-56	7.205030e-54
MsaG015311	MsaG000633	0.832868	1.339214e-55	4.211105e-53
MsaG016651	MsaG000633	0.814513	2.561857e-51	4.891823e-49
MsaG017013	MsaG000633	0.838583	4.855790e-57	1.813405e-54
MsaG017269	MsaG000633	0.828340	1.698659e-54	4.689848e-52
MsaG017691	MsaG000633	0.859215	9.452326e-63	7.133589e-60
MsaG017820	MsaG000633	0.812292	7.840402e-51	1.416195e-48
MsaG018134	MsaG000633	0.807345	8.983501e-50	1.439160e-47
MsaG018322	MsaG000633	0.838652	4.660978e-57	1.744429e-54
MsaG018455	MsaG000633	0.834071	6.731956e-56	2.193060e-53
MsaG018565	MsaG000633	0.806261	1.518716e-49	2.371590e-47
MsaG018741	MsaG000633	0.826441	4.822183e-54	1.262494e-51
MsaG019259	MsaG000633	0.859442	8.085633e-63	6.154795e-60
MsaG019235	MsaG000633	0.801380	1.550494e-48	2.162749e-46
MsaG019586	MsaG000633	0.817517	5.508348e-52	1.135511e-49
MsaG019607	MsaG000633	0.878988	3.779185e-69	6.510001e-66
MsaG019639	MsaG000633	0.806220	1.549277e-49	2.416923e-47
MsaG020290	MsaG000633	0.878473	5.725684e-69	9.629241e-66
MsaG020568	MsaG000633	0.800795	2.039879e-48	2.808059e-46
MsaG021249	MsaG000633	0.826684	4.222661e-54	1.112987e-51
MsaG021286	MsaG000633	0.800714	2.118160e-48	2.910535e-46
MsaG022595	MsaG000633	0.816049	1.171539e-51	2.325695e-49
MsaG023271	MsaG000633	0.827001	3.549842e-54	9.439124e-52
MsaG023886	MsaG000633	0.803740	5.084728e-49	7.486924e-47
MsaG023971	MsaG000633	0.836572	1.582993e-56	5.558448e-54
MsaG025484	MsaG000633	0.807986	6.578515e-50	1.070217e-47
MsaG026902	MsaG000633	0.832064	2.114324e-55	6.495241e-53
MsaG027039	MsaG000633	0.860314	4.427363e-63	3.484593e-60
MsaG027653	MsaG000633	0.870030	4.036862e-66	4.684086e-63
MsaG027933	MsaG000633	0.846760	3.342702e-59	1.623828e-56
MsaG028034	MsaG000633	0.817677	5.072349e-52	1.049904e-49
MsaG028373	MsaG000633	0.807631	7.820160e-50	1.261350e-47
MsaG028716	MsaG000633	0.832947	1.279993e-55	4.034325e-53
MsaG028758	MsaG000633	0.850453	3.205073e-60	1.764264e-57
MsaG030083	MsaG000633	0.882001	3.194829e-70	6.332672e-67
MsaG030313	MsaG000633	0.820924	9.312318e-53	2.098821e-50
MsaG030400	MsaG000633	0.826873	3.807903e-54	1.008950e-51
MsaG030401	MsaG000633	0.825704	7.205293e-54	1.848082e-51
MsaG030402	MsaG000633	0.817835	4.673846e-52	9.714123e-50
MsaG030507	MsaG000633	0.801958	1.181532e-48	1.669865e-46
MsaG031236	MsaG000633	0.841158	1.043463e-57	4.224697e-55
MsaG031427	MsaG000633	0.805068	2.696287e-49	4.094230e-47
MsaG032786	MsaG000633	0.801579	1.412351e-48	1.978928e-46
MsaG033400	MsaG000633	0.800963	1.885082e-48	2.604734e-46
MsaG033596	MsaG000633	0.806086	1.652536e-49	2.569770e-47
MsaG034079	MsaG000633	0.864650	2.082677e-64	1.940346e-61
MsaG034148	MsaG000633	0.856880	4.637855e-62	3.208365e-59
MsaG034827	MsaG000633	0.845069	9.579438e-59	4.399965e-56
MsaG034828	MsaG000633	0.854835	1.824311e-61	1.171612e-58
MsaG034829	MsaG000633	0.850621	2.876479e-60	1.592725e-57
MsaG035054	MsaG000633	0.813874	3.540748e-51	6.653669e-49
MsaG035148	MsaG000633	0.803113	6.845827e-49	9.935106e-47
MsaG035935	MsaG000633	0.875485	6.158850e-68	9.050177e-65
MsaG037009	MsaG000633	0.839389	3.008549e-57	1.152110e-54
MsaG040053	MsaG000633	0.812404	7.412872e-51	1.342777e-48
MsaG040582	MsaG000633	0.813759	3.752466e-51	7.031126e-49
MsaG040649	MsaG000633	0.810801	1.648061e-50	2.869915e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000633	MtrunA17_Chr1g0149841	83.968	499	33	4	1	454	1	497	0.0	783
MsaG000633	MtrunA17_Chr1g0149851	66.267	501	103	13	1	453	1	483	0.0	582
MsaG000633	MtrunA17_Chr7g0275891	67.196	378	80	9	1	364	1	348	1.37e-153	439
MsaG000633	MtrunA17_Chr3g0137101	64.589	353	105	5	3	350	6	343	1.79e-147	434
MsaG000633	MtrunA17_Chr7g0275401	72.993	274	70	2	1	273	1	271	2.41e-128	373
MsaG000633	MtrunA17_Chr1g0149831	93.878	196	9	1	64	259	1	193	2.23e-116	340
MsaG000633	MtrunA17_Chr2g0304841	54.360	344	141	7	3	336	16	353	1.27e-108	336
MsaG000633	MtrunA17_Chr4g0067981	57.588	257	107	2	2	258	28	282	2.65e-94	298
MsaG000633	MtrunA17_Chr2g0294911	51.536	293	131	3	1	289	25	310	7.56e-93	293
MsaG000633	MtrunA17_Chr4g0074411	49.849	331	153	6	5	335	18	335	6.39e-92	290
MsaG000633	MtrunA17_Chr4g0074401	47.917	336	159	7	3	335	15	337	1.44e-91	289
MsaG000633	MtrunA17_Chr1g0161431	54.135	266	105	3	4	259	10	268	1.03e-90	288
MsaG000633	MtrunA17_Chr8g0376881	56.589	258	102	3	3	256	23	274	8.55e-86	272
MsaG000633	MtrunA17_Chr3g0123131	55.823	249	102	2	5	249	13	257	3.91e-83	266
MsaG000633	MtrunA17_Chr3g0134461	54.167	240	57	2	2	240	5	192	9.18e-70	219
MsaG000633	MtrunA17_Chr4g0074421	57.812	192	74	3	55	245	2	187	1.66e-63	204
MsaG000633	MtrunA17_Chr4g0009851	39.326	267	132	4	5	271	11	247	4.33e-55	186
MsaG000633	MtrunA17_Chr3g0134481	46.888	241	66	4	2	242	5	183	9.50e-55	181
MsaG000633	MtrunA17_Chr4g0009901	36.271	295	146	6	2	283	7	272	5.40e-49	168
MsaG000633	MtrunA17_Chr4g0009981	38.739	222	107	5	50	271	2	194	1.78e-40	145
MsaG000633	MtrunA17_Chr6g0471041	34.286	245	131	3	4	247	13	228	1.95e-37	141
MsaG000633	MtrunA17_Chr6g0469321	78.022	91	20	0	207	297	70	160	3.01e-36	131
MsaG000633	MtrunA17_Chr8g0391911	33.977	259	143	6	5	250	9	252	6.15e-32	122
MsaG000633	MtrunA17_Chr8g0350761	29.688	256	156	5	8	243	20	271	6.03e-28	115
MsaG000633	MtrunA17_Chr6g0473731	35.152	165	86	3	85	249	10	153	7.02e-25	106
MsaG000633	MtrunA17_Chr4g0031961	47.788	113	53	2	156	262	94	206	1.02e-23	101
MsaG000633	MtrunA17_Chr3g0127941	34.532	139	86	2	9	143	56	193	9.19e-23	101
MsaG000633	MtrunA17_Chr6g0456631	37.008	127	77	2	3	127	7	132	2.82e-22	93.6
MsaG000633	MtrunA17_Chr4g0009991	38.194	144	61	2	97	240	1	116	8.07e-22	90.5
MsaG000633	MtrunA17_Chr4g0011071	32.934	167	85	4	51	217	35	174	1.60e-21	91.7
MsaG000633	MtrunA17_Chr7g0276361	32.258	186	111	5	2	178	5	184	1.76e-21	97.4
MsaG000633	MtrunA17_Chr8g0345901	33.929	168	97	3	11	164	38	205	5.99e-21	95.9
MsaG000633	MtrunA17_Chr7g0255711	65.000	60	21	0	190	249	90	149	8.07e-20	89.7
MsaG000633	MtrunA17_Chr1g0181811	36.885	122	74	2	9	127	85	206	1.32e-19	92.0
MsaG000633	MtrunA17_Chr7g0223971	30.102	196	88	3	88	250	2	181	3.31e-19	90.1
MsaG000633	MtrunA17_Chr4g0030271	35.433	127	78	2	5	127	84	210	4.83e-19	90.1
MsaG000633	MtrunA17_Chr8g0383961	35.484	124	80	0	4	127	13	136	8.85e-19	85.9
MsaG000633	MtrunA17_Chr3g0091641	33.871	124	79	1	9	129	24	147	1.02e-18	89.0
MsaG000633	MtrunA17_Chr4g0061021	32.258	124	81	1	9	129	33	156	3.30e-17	84.3
MsaG000633	MtrunA17_Chr2g0324891	40.351	114	57	2	188	301	158	260	4.52e-17	83.2
MsaG000633	MtrunA17_Chr5g0400241	54.545	66	30	0	184	249	304	369	5.38e-17	83.6
MsaG000633	MtrunA17_Chr5g0400241	34.677	124	77	2	5	127	14	134	7.54e-12	67.4
MsaG000633	MtrunA17_Chr4g0040481	53.030	66	31	0	188	253	155	220	3.75e-16	80.1
MsaG000633	MtrunA17_Chr5g0423031	38.835	103	57	3	2	103	7	104	6.24e-16	75.9
MsaG000633	MtrunA17_Chr4g0054981	55.738	61	27	0	189	249	308	368	2.52e-15	78.2
MsaG000633	MtrunA17_Chr4g0054981	32.258	124	80	2	5	127	14	134	8.13e-11	64.3
MsaG000633	MtrunA17_Chr1g0198601	46.575	73	38	1	179	250	199	271	3.52e-14	73.9
MsaG000633	MtrunA17_Chr4g0062921	48.684	76	37	2	176	250	221	295	1.19e-13	72.8
MsaG000633	MtrunA17_Chr7g0274471	50.000	76	37	1	189	263	216	291	1.88e-13	72.0
MsaG000633	MtrunA17_Chr4g0045361	38.739	111	46	3	186	295	269	358	2.25e-13	71.6
MsaG000633	MtrunA17_Chr1g0190301	52.941	68	31	1	187	253	171	238	3.15e-13	71.2
MsaG000633	MtrunA17_Chr4g0010001	38.095	84	51	1	2	85	7	89	3.52e-13	65.1
MsaG000633	MtrunA17_Chr6g0461641	43.878	98	46	4	191	284	42	134	1.10e-12	69.3
MsaG000633	MtrunA17_Chr7g0261911	51.471	68	32	1	187	253	258	325	1.33e-12	69.7
MsaG000633	MtrunA17_Chr5g0422621	49.231	65	32	1	185	248	192	256	2.04e-12	68.6
MsaG000633	MtrunA17_Chr5g0402631	50.794	63	30	1	188	249	211	273	2.05e-12	68.2
MsaG000633	MtrunA17_Chr2g0321461	56.364	55	23	1	191	244	45	99	2.42e-12	68.2
MsaG000633	MtrunA17_Chr4g0042451	43.056	72	38	2	191	259	17	88	3.23e-12	67.4
MsaG000633	MtrunA17_Chr2g0290991	57.627	59	24	1	187	244	35	93	3.87e-12	67.0
MsaG000633	MtrunA17_Chr1g0197171	55.932	59	25	1	187	244	40	98	5.08e-12	66.6
MsaG000633	MtrunA17_Chr1g0175081	54.717	53	23	1	193	244	24	76	7.97e-12	61.6
MsaG000633	MtrunA17_Chr5g0409731	37.864	103	56	3	187	281	21	123	9.68e-12	65.9
MsaG000633	MtrunA17_Chr7g0256551	30.216	139	76	3	11	128	11	149	1.26e-11	64.7
MsaG000633	MtrunA17_Chr5g0417521	52.727	55	25	1	191	244	15	69	1.31e-11	65.9
MsaG000633	MtrunA17_Chr8g0352871	28.986	138	78	3	11	128	11	148	2.33e-11	62.4
MsaG000633	MtrunA17_Chr2g0310011	52.542	59	27	1	187	244	31	89	2.98e-11	64.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsaG000633	AT2G25180.1	58.333	336	122	9	3	332	11	334	9.59e-113	344
MsaG000633	AT4G31920.1	55.193	337	107	9	3	329	11	313	1.42e-103	319
MsaG000633	AT3G16857.1	50.000	306	119	5	3	285	31	325	1.71e-92	294
MsaG000633	AT3G16857.2	50.000	306	119	5	3	285	31	325	4.14e-92	293
MsaG000633	AT5G58080.1	46.891	386	160	10	3	371	12	369	1.40e-88	283
MsaG000633	AT2G01760.1	43.056	360	177	9	1	337	3	357	1.18e-78	249
MsaG000633	AT1G67710.1	54.980	251	100	4	6	249	8	252	5.16e-78	252
MsaG000633	AT3G16857.3	49.434	265	100	5	44	285	2	255	5.22e-75	247
MsaG000633	AT2G01760.2	39.948	388	177	10	1	337	3	385	1.89e-72	234
MsaG000633	AT1G67710.2	53.368	193	77	4	64	249	1	187	1.15e-51	181
MsaG000633	AT5G49240.1	38.819	237	142	2	5	240	38	272	1.19e-49	171
MsaG000633	AT2G01760.3	39.731	297	151	9	64	337	1	292	1.85e-49	171
MsaG000633	AT3G62670.1	37.795	254	139	7	10	257	42	282	7.98e-44	159
MsaG000633	AT1G67710.3	47.977	173	77	4	84	249	12	178	4.39e-37	141
MsaG000633	AT1G49190.1	31.387	274	170	5	4	267	29	294	2.79e-35	135
MsaG000633	AT5G07210.2	31.900	279	144	7	7	250	14	281	2.43e-34	135
MsaG000633	AT2G27070.1	31.338	284	140	7	7	249	14	283	6.46e-32	128
MsaG000633	AT5G07210.1	31.010	287	144	8	7	250	14	289	9.28e-32	128
MsaG000633	AT2G46790.3	39.837	123	69	2	9	127	37	158	3.75e-24	104
MsaG000633	AT2G46790.1	39.837	123	69	2	9	127	37	158	4.73e-24	104
MsaG000633	AT5G59570.2	49.462	93	47	0	170	262	120	212	4.77e-23	99.4
MsaG000633	AT5G59570.1	49.462	93	47	0	170	262	120	212	4.77e-23	99.4
MsaG000633	AT1G49190.2	37.600	125	78	0	4	128	29	153	1.55e-22	100
MsaG000633	AT5G24470.1	36.719	128	76	2	7	130	48	174	1.02e-21	98.2
MsaG000633	AT3G46640.2	37.107	159	86	4	104	249	45	202	2.39e-21	95.1
MsaG000633	AT3G46640.1	37.107	159	86	4	104	249	45	202	2.39e-21	95.1
MsaG000633	AT2G40970.1	45.370	108	55	1	169	272	79	186	2.56e-21	93.2
MsaG000633	AT3G46640.3	37.107	159	86	4	104	249	45	202	3.30e-21	94.7
MsaG000633	AT5G02810.1	38.525	122	72	1	9	127	78	199	1.16e-20	95.5
MsaG000633	AT5G60100.7	37.008	127	76	2	5	127	59	185	2.66e-20	93.2
MsaG000633	AT5G60100.6	37.008	127	76	2	5	127	59	185	2.66e-20	93.2
MsaG000633	AT5G60100.4	37.008	127	76	2	5	127	59	185	2.66e-20	93.2
MsaG000633	AT5G05090.1	51.899	79	38	0	171	249	61	139	3.56e-20	90.5
MsaG000633	AT5G60100.5	37.008	127	76	2	5	127	59	185	4.69e-20	93.2
MsaG000633	AT5G60100.3	37.008	127	76	2	5	127	59	185	4.69e-20	93.2
MsaG000633	AT5G60100.1	37.008	127	76	2	5	127	59	185	4.69e-20	93.2
MsaG000633	AT3G10760.1	65.000	60	21	0	190	249	104	163	4.76e-20	91.3
MsaG000633	AT5G60100.2	37.008	127	76	2	5	127	59	185	8.81e-20	92.4
MsaG000633	AT5G44190.2	59.155	71	29	0	183	253	139	209	1.13e-19	90.5
MsaG000633	AT5G44190.1	59.155	71	29	0	183	253	139	209	1.26e-19	90.9
MsaG000633	AT5G61380.1	33.871	124	79	1	9	129	19	142	5.91e-19	90.1
MsaG000633	AT2G20570.1	39.370	127	64	2	140	253	89	215	2.84e-17	84.0
MsaG000633	AT2G20570.2	63.793	58	21	0	196	253	174	231	8.61e-16	79.7
MsaG000633	AT4G18020.8	54.286	70	30	1	185	254	292	359	7.93e-15	77.0
MsaG000633	AT4G18020.11	54.286	70	30	1	185	254	292	359	7.93e-15	77.0
MsaG000633	AT4G18020.4	54.286	70	30	1	185	254	292	359	7.93e-15	77.0
MsaG000633	AT4G18020.5	54.286	70	30	1	185	254	292	359	7.93e-15	77.0
MsaG000633	AT4G18020.10	54.286	70	30	1	185	254	292	359	7.93e-15	77.0
MsaG000633	AT4G18020.7	54.286	70	30	1	185	254	292	359	7.93e-15	77.0
MsaG000633	AT4G18020.3	54.286	70	30	1	185	254	292	359	1.06e-14	76.6
MsaG000633	AT4G18020.2	54.286	70	30	1	185	254	292	359	1.06e-14	76.6
MsaG000633	AT4G18020.1	54.286	70	30	1	185	254	292	359	1.06e-14	76.6
MsaG000633	AT4G18020.6	54.286	70	30	1	185	254	292	359	1.06e-14	76.6
MsaG000633	AT4G18020.9	54.286	70	30	1	185	254	292	359	1.06e-14	76.6
MsaG000633	AT2G03500.1	54.839	62	27	1	190	250	232	293	3.79e-13	71.6
MsaG000633	AT5G45580.2	53.731	67	28	2	181	244	11	77	1.78e-12	68.2
MsaG000633	AT3G57040.2	28.395	162	94	2	11	150	11	172	2.04e-12	67.0
MsaG000633	AT3G57040.1	28.395	162	94	2	11	150	11	172	2.04e-12	67.0
MsaG000633	AT3G04030.1	56.364	55	23	1	191	244	45	99	2.56e-12	68.6
MsaG000633	AT3G04030.3	56.364	55	23	1	191	244	45	99	2.68e-12	68.6
MsaG000633	AT5G45580.1	55.932	59	25	1	187	244	3	61	3.12e-12	67.0
MsaG000633	AT5G18240.2	58.182	55	22	1	191	244	45	99	4.71e-12	67.8
MsaG000633	AT5G18240.3	58.182	55	22	1	191	244	45	99	4.71e-12	67.8
MsaG000633	AT5G18240.5	58.182	55	22	1	191	244	45	99	4.74e-12	67.8
MsaG000633	AT5G18240.1	58.182	55	22	1	191	244	45	99	5.14e-12	67.8
MsaG000633	AT5G18240.4	58.182	55	22	1	191	244	45	99	5.14e-12	67.8
MsaG000633	AT3G56380.2	31.298	131	76	2	9	125	20	150	8.28e-12	63.5
MsaG000633	AT2G40670.2	32.331	133	74	2	9	125	29	161	1.77e-11	62.8
MsaG000633	AT1G25550.1	51.667	60	28	1	190	248	208	267	2.40e-11	65.5
MsaG000633	AT3G56380.1	31.538	130	76	2	9	125	20	149	2.43e-11	62.4
MsaG000633	AT1G49560.1	47.222	72	37	1	186	256	187	258	3.82e-11	64.7
MsaG000633	AT3G04030.2	51.852	54	26	0	191	244	45	98	3.92e-11	65.1
MsaG000633	AT1G69580.1	54.545	55	24	1	191	244	34	88	5.49e-11	64.3
MsaG000633	AT1G69580.2	54.545	55	24	1	191	244	34	88	5.58e-11	64.3
MsaG000633	AT2G40670.1	32.576	132	74	2	9	125	29	160	5.58e-11	61.6
MsaG000633	AT4G37180.1	49.180	61	30	1	189	248	208	268	6.21e-11	64.3
MsaG000633	AT1G68670.1	42.857	77	43	1	173	248	197	273	6.72e-11	63.9
MsaG000633	AT4G37180.2	49.180	61	30	1	189	248	215	275	7.36e-11	63.9
MsaG000633	AT1G13300.1	42.353	85	46	2	165	248	157	239	9.55e-11	63.5

Find 96 sgRNAs with CRISPR-Local

Find sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGAACATGTCTCAAGATTT+TGG	0.179210	1:-8348027	MsaT000633.1:CDS
ATTCCTTTCATCACCATCTT+TGG	0.256348	1:+8347185	None:intergenic
ATCTAAAAGGATTGTTATAA+TGG	0.273251	1:+8346106	None:intergenic
ACAGAAGGTGCAATGGTATT+TGG	0.304024	1:-8345739	MsaT000633.1:CDS
TGTACCTCTTTCAGTCTAAC+AGG	0.317233	1:+8347131	None:intergenic
CCATTTCCACTATCAGAATT+AGG	0.318838	1:+8347047	None:intergenic
ATGAATGATCAGTTTCCTAT+TGG	0.330551	1:-8348077	MsaT000633.1:CDS
CCTAATTCTGATAGTGGAAA+TGG	0.330629	1:-8347047	MsaT000633.1:CDS
ATACCTCTTTGAACATCATT+TGG	0.333499	1:+8345920	None:intergenic
CCAGATGGAAAGGATCTAAA+AGG	0.348535	1:+8346093	None:intergenic
TCATTTGGATTGCATGAGTT+AGG	0.350469	1:+8345935	None:intergenic
TCCAACTCCACTTCTTAAAT+AGG	0.361147	1:+8346170	None:intergenic
GGAAGATAAGAGTTTGTTCC+AGG	0.362766	1:+8345695	None:intergenic
ATAGGCTCTTCTATGATTCC+TGG	0.370372	1:-8345563	MsaT000633.1:CDS
GGAAACTTGGACTACAATTA+TGG	0.374368	1:-8345518	MsaT000633.1:CDS
TTTAAGCTCCTTGAGCTTGT+TGG	0.387237	1:-8347340	MsaT000633.1:CDS
ACATGGTGCGTGTGATTATC+TGG	0.387305	1:-8347159	MsaT000633.1:CDS
TGAAAGAGGTACAGATCATT+TGG	0.404224	1:-8347121	MsaT000633.1:CDS
ATGCCTCATGTGTCATTTCA+AGG	0.407109	1:-8345647	MsaT000633.1:CDS
AATGTGATCGGCAGTTCAAT+AGG	0.412930	1:-8345581	MsaT000633.1:CDS
TATGAACATTGCTGATTACT+AGG	0.423694	1:+8347380	None:intergenic
TCATGTGTCATTTCAAGGTT+GGG	0.431069	1:-8345642	MsaT000633.1:CDS
TACCATGGTATTGACACCTT+TGG	0.431203	1:+8347994	None:intergenic
CCATTCATATTCACATTAGT+AGG	0.431732	1:+8346042	None:intergenic
GGACATTTGCATACATTGAA+TGG	0.439183	1:-8346147	MsaT000633.1:CDS
CATTTGGATTGCATGAGTTA+GGG	0.440974	1:+8345936	None:intergenic
GTTGCTGCGGTTAATCAATT+AGG	0.445001	1:-8346849	MsaT000633.1:CDS
CCTACTAATGTGAATATGAA+TGG	0.451724	1:-8346042	MsaT000633.1:CDS
TCATTTGGCAGCATGTAATC+AGG	0.452747	1:-8347106	MsaT000633.1:CDS
GACGCGCCTAATTCTGATAG+TGG	0.455329	1:-8347053	MsaT000633.1:CDS
AGAAGAAGCCTCGAACTGTT+TGG	0.455763	1:-8346896	MsaT000633.1:CDS
CTGACTCGGCTGAAGAGTTC+CGG	0.455864	1:+8346008	None:intergenic
TGAGCTTGTTGGACTTGAGA+TGG	0.457732	1:-8347329	MsaT000633.1:CDS
GCAAGAACTCGCATTCCAAT+AGG	0.458411	1:+8348062	None:intergenic
GGACTACAATTATGGTGATT+CGG	0.460683	1:-8345510	MsaT000633.1:CDS
ATCAGTTCAAGAATCTTCTT+CGG	0.461313	1:+8346568	None:intergenic
CTCATGTGTCATTTCAAGGT+TGG	0.464023	1:-8345643	MsaT000633.1:CDS
AGCTTAAATCCATCCATGTC+TGG	0.471845	1:+8347355	None:intergenic
GCATGGTTAAAAGATTCTCT+TGG	0.472134	1:+8345674	None:intergenic
GGGAAACATTCGGCTGGGAC+AGG	0.477461	1:-8347026	MsaT000633.1:CDS
CTAATTCTGATAGTGGAAAT+GGG	0.482228	1:-8347046	MsaT000633.1:CDS
ATGAAAAGCCATCTAGAAAA+CGG	0.489677	1:-8346989	MsaT000633.1:CDS
GATACATCCTATTTAAGAAG+TGG	0.493596	1:-8346177	MsaT000633.1:CDS
TCCTATTTAAGAAGTGGAGT+TGG	0.497128	1:-8346171	MsaT000633.1:CDS
GATAATAACAATAATCATGA+TGG	0.497207	1:-8345620	MsaT000633.1:CDS
CACTGCTCAAAACGCGATAA+CGG	0.499559	1:-8347440	MsaT000633.1:CDS
TTTAGATCCTTTCCATCTGG+TGG	0.500957	1:-8346090	MsaT000633.1:CDS
TCCCTTTACTTGAAAACAGA+AGG	0.502275	1:-8345754	MsaT000633.1:CDS
GGAAGACAAACAAGATCATA+TGG	0.510045	1:-8346223	MsaT000633.1:CDS
TAGTGGAAATGGGAAACATT+CGG	0.510168	1:-8347036	MsaT000633.1:CDS
AGCACAATGCAACAACTACC+TGG	0.515145	1:-8345713	MsaT000633.1:CDS
GGAAATGGGAAACATTCGGC+TGG	0.517134	1:-8347032	MsaT000633.1:CDS
TGCCGATCACATTAGAAGAA+TGG	0.518061	1:+8345591	None:intergenic
TACCATTCTTCTAATGTGAT+CGG	0.518616	1:-8345593	MsaT000633.1:CDS
TTGCATGAGTTAGGGCCGAT+TGG	0.520081	1:+8345944	None:intergenic
GAAGGTGGCCAGCCATCTCC+AGG	0.523004	1:-8346521	MsaT000633.1:intron
TTGCATAACTTACTTATGAC+AGG	0.526242	1:+8347301	None:intergenic
TATTTAAGAAGTGGAGTTGG+AGG	0.527033	1:-8346168	MsaT000633.1:CDS
ATGAATGGATTGCATTCTGC+CGG	0.538303	1:-8346027	MsaT000633.1:CDS
GAAACCTGTTAGACTGAAAG+AGG	0.539886	1:-8347135	MsaT000633.1:CDS
TGTCGAGCAAGAAGGAAACT+TGG	0.540152	1:-8345531	MsaT000633.1:CDS
TATTGGAATGCGAGTTCTTG+CGG	0.540178	1:-8348060	MsaT000633.1:CDS
TCAGCGGACCAAACAGTTCG+AGG	0.550196	1:+8346888	None:intergenic
AAGGATAAGAATGAAGATGA+TGG	0.554575	1:-8346966	MsaT000633.1:CDS
CAATGTTCATATGCCAGACA+TGG	0.556391	1:-8347368	MsaT000633.1:CDS
CTTGAAAACAGAAGGTGCAA+TGG	0.560167	1:-8345746	MsaT000633.1:CDS
ATGGTGATTCGGTACAATGA+AGG	0.563231	1:-8345499	None:intergenic
TAAGAATGAAGATGATGGTG+AGG	0.566326	1:-8346961	MsaT000633.1:CDS
TGATCAGCTAAAGTTCCAAT+CGG	0.568120	1:-8345959	MsaT000633.1:CDS
TGTATCTGAACCACTAGCTA+TGG	0.569493	1:+8346194	None:intergenic
ATGAATGTTGTCGAGCAAGA+AGG	0.574186	1:-8345539	MsaT000633.1:CDS
TGATGGTGAGGAAGAAAGTG+AGG	0.580573	1:-8346949	MsaT000633.1:CDS
CATAACACCACCAGATGGAA+AGG	0.581151	1:+8346083	None:intergenic
GTTCATATGCCAGACATGGA+TGG	0.584384	1:-8347364	MsaT000633.1:CDS
AATCCAAATGATGTTCAAAG+AGG	0.585635	1:-8345923	MsaT000633.1:intron
TGCTCGACAACATTCATACC+AGG	0.593541	1:+8345545	None:intergenic
TTTAAATTATGTGTCTGACT+CGG	0.594323	1:+8345994	None:intergenic
TCTCAAGTCCAACAAGCTCA+AGG	0.597253	1:+8347332	None:intergenic
TGAAAATCTGACAAGGGAGA+AGG	0.601495	1:-8346539	MsaT000633.1:CDS
AAATCTGACAAGGGAGAAGG+TGG	0.609003	1:-8346536	MsaT000633.1:CDS
ACACCGCAAGTTTGTTGCTG+CGG	0.610830	1:-8346862	MsaT000633.1:CDS
TGCGAATGATGATCCAAAGA+TGG	0.615837	1:-8347198	MsaT000633.1:CDS
CTACTCATAACACCACCAGA+TGG	0.616853	1:+8346078	None:intergenic
GAAATGGGAAACATTCGGCT+GGG	0.620073	1:-8347031	MsaT000633.1:CDS
AAAGCCATCTAGAAAACGGA+AGG	0.622229	1:-8346985	MsaT000633.1:CDS
ATAACTTACTTATGACAGGT+AGG	0.629417	1:+8347305	None:intergenic
GATCCAAAGATGGTGATGAA+AGG	0.637771	1:-8347188	MsaT000633.1:CDS
ACACATGAGGCATAGCAGCA+TGG	0.642777	1:+8345657	None:intergenic
CTCCAAAGGTGTCAATACCA+TGG	0.650196	1:-8347996	MsaT000633.1:intron
ATGGCAGCAGCCATAGCTAG+TGG	0.659987	1:-8346204	MsaT000633.1:CDS
TAACCGCAGCAACAAACTTG+CGG	0.661176	1:+8346859	None:intergenic
AAACTTGCGGTGTAAATCAG+CGG	0.665866	1:+8346872	None:intergenic
CAACCTTGAAATGACACATG+AGG	0.667024	1:+8345644	None:intergenic
TGAATGTTGAAAATCTGACA+AGG	0.702505	1:-8346546	MsaT000633.1:CDS
GAATGTTGAAAATCTGACAA+GGG	0.715396	1:-8346545	MsaT000633.1:CDS
GTGATGAAAGGAATTGAACA+TGG	0.742148	1:-8347176	MsaT000633.1:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
Chr1	gene	8345502	8348099	8345502	ID=MsaG000633
Chr1	mRNA	8345502	8348099	8345502	ID=MsaT000633.1;Parent=MsaG000633
Chr1	exon	8345502	8345789	8345502	ID=MsaT000633.1.exon6;Parent=MsaT000633.1
Chr1	CDS	8345502	8345789	8345502	ID=cds.MsaT000633.1;Parent=MsaT000633.1
Chr1	exon	8345924	8346280	8345924	ID=MsaT000633.1.exon5;Parent=MsaT000633.1
Chr1	CDS	8345924	8346280	8345924	ID=cds.MsaT000633.1;Parent=MsaT000633.1
Chr1	exon	8346522	8346598	8346522	ID=MsaT000633.1.exon4;Parent=MsaT000633.1
Chr1	CDS	8346522	8346598	8346522	ID=cds.MsaT000633.1;Parent=MsaT000633.1
Chr1	exon	8346841	8347227	8346841	ID=MsaT000633.1.exon3;Parent=MsaT000633.1
Chr1	CDS	8346841	8347227	8346841	ID=cds.MsaT000633.1;Parent=MsaT000633.1
Chr1	exon	8347314	8347466	8347314	ID=MsaT000633.1.exon2;Parent=MsaT000633.1
Chr1	CDS	8347314	8347466	8347314	ID=cds.MsaT000633.1;Parent=MsaT000633.1
Chr1	exon	8347997	8348099	8347997	ID=MsaT000633.1.exon1;Parent=MsaT000633.1
Chr1	CDS	8347997	8348099	8347997	ID=cds.MsaT000633.1;Parent=MsaT000633.1

Gene Sequence

>MsaT000633.1

ATGAATGATCAGTTTCCTATTGGAATGCGAGTTCTTGCGGTTGATGATGATAGAACATGTCTCAAGATTTTGGAGAAACTTCTCCAAAGGTGTCAATACCATGTAACCACTGCTCAAAACGCGATAACGGCGTTGAACTTGTTGAGAGAAAACAAAAGCAATTTTGACCTAGTAATCAGCAATGTTCATATGCCAGACATGGATGGATTTAAGCTCCTTGAGCTTGTTGGACTTGAGATGGACCTACCTGTCATAATGTTTTCTGCGAATGATGATCCAAAGATGGTGATGAAAGGAATTGAACATGGTGCGTGTGATTATCTGGTGAAACCTGTTAGACTGAAAGAGGTACAGATCATTTGGCAGCATGTAATCAGGAAGAAGAAAACTAGCAAAAGAAGCAATCATGACGCGCCTAATTCTGATAGTGGAAATGGGAAACATTCGGCTGGGACAGGAAATTCTGATAAAAATGAAAAGCCATCTAGAAAACGGAAGGATAAGAATGAAGATGATGGTGAGGAAGAAAGTGAGGATGATTATGACAATGATGATCAAACTGCGCAGAAGAAGCCTCGAACTGTTTGGTCCGCTGATTTACACCGCAAGTTTGTTGCTGCGGTTAATCAATTAGGCGTTGACAAGGCTGTACCGAAGAAGATTCTTGAACTGATGAATGTTGAAAATCTGACAAGGGAGAAGGTGGCCAGCCATCTCCAGAAGTATAGACTCTATCTAAAAAGAATTAGTTGTGCGGAAGACAAACAAGATCATATGGCAGCAGCCATAGCTAGTGGTTCAGATACATCCTATTTAAGAAGTGGAGTTGGAGGACATTTGCATACATTGAATGGCTCTACACAGTTTCATAACCATTATAACAATCCTTTTAGATCCTTTCCATCTGGTGGTGTTATGAGTAGTAGATTCAACACACCTACTAATGTGAATATGAATGGATTGCATTCTGCCGGAACTCTTCAGCCGAGTCAGACACATAATTTAAACAACTTGACAGATGATCAGCTAAAGTTCCAATCGGCCCTAACTCATGCAATCCAAATGATGTTCAAAGAGAATTCACAGTTTCTCCCTTTACTTGAAAACAGAAGGTGCAATGGTATTTGGTCAAGCACAATGCAACAACTACCTGGAACAAACTCTTATCTTCCAAGAGAATCTTTTAACCATGCTGCTATGCCTCATGTGTCATTTCAAGGTTGGGATAATAACAATAATCATGATGGAAGTTACCATTCTTCTAATGTGATCGGCAGTTCAATAGGCTCTTCTATGATTCCTGGTATGAATGTTGTCGAGCAAGAAGGAAACTTGGACTACAATTATGGTGATTCGGTACAATGA

Protein sequence

>MsaT000633.1

MNDQFPIGMRVLAVDDDRTCLKILEKLLQRCQYHVTTAQNAITALNLLRENKSNFDLVISNVHMPDMDGFKLLELVGLEMDLPVIMFSANDDPKMVMKGIEHGACDYLVKPVRLKEVQIIWQHVIRKKKTSKRSNHDAPNSDSGNGKHSAGTGNSDKNEKPSRKRKDKNEDDGEEESEDDYDNDDQTAQKKPRTVWSADLHRKFVAAVNQLGVDKAVPKKILELMNVENLTREKVASHLQKYRLYLKRISCAEDKQDHMAAAIASGSDTSYLRSGVGGHLHTLNGSTQFHNHYNNPFRSFPSGGVMSSRFNTPTNVNMNGLHSAGTLQPSQTHNLNNLTDDQLKFQSALTHAIQMMFKENSQFLPLLENRRCNGIWSSTMQQLPGTNSYLPRESFNHAAMPHVSFQGWDNNNNHDGSYHSSNVIGSSIGSSMIPGMNVVEQEGNLDYNYGDSVQ*